F336764

General Info

Members Datasets Scaffolds Average Seq Length
224 180 187 677

Family's Representative Sequence

Representative Sequence 3300021361|Ga0213872_10000096|Ga0213872_1000009628
Length 809
Sequence MSAYPHMLAPLDLGFTTLKNRVLMGSMHVGLEEARDGFERMAAFYAERARGGVGLIVTGGIAPNRRASPMPGGSCMTNEEEAAKHRVVTDAVHAEGGKIAMQILHFGRYAYQPELVAPSALQAPINPFRPHPLSADEVEETIADYVRCAALAQGAGYDGVEIMGSEGYLINEFIAARTNQRDDEWGGSYAKRIRFPVEIVRRTRERVGQNFIIIYRLSMLDLVEGGSTLDEVVQLAQAIEAAGATIINTGIGWHEARIPTIATKVPRAAFAWVTQQLMGKVKIPLVATNRINTPEVAEQVLTDRMCDMVSMARPFLADPEFVRKAEQGRANEINTCIGCNQACLDHTFAGKITSCLVNPRACHETLMPLTQAKARTPVAVVGAGPAGLAFATTAAQRGFEVTLFDAASEIGGQFNIAKQVPGKEEFYETLRYFGRQVELTGVKLQLGRKVDAQALLSAGFKQVVLATGVTPRTPDFEGVNHPKVLGYLDVLRDKKPVGQTVAVIGAGGIGFDVSEFLLHEGTSPSLDAAKFFDEWGIDTGYAHAGGLKPAKLEKSPRKIYLLQRKASVEMLAGVTYRKVDDAGLHITMNGEDHVIPADTVVLCAGQEPQRELQAALEQGGAQVHLIGGADKAAELDAKRAIKQGTELALALDTGAPQAKEASAPVASGLNPAMQETLARWHAMVAQGDLSELPALLHRKAVFRSPMAHTPYPGAQVVSLILNTVSKVFEDFTYHREFVSADGQSVALEFSAKVGDKSLKGMDLIQFDDEGKIIDFEVMVRPISGLQALGAVMGERLAPYLAMAKAAGMT

Samples

Sample ID Description Type Environment
1 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
2 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
3 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
4 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
5 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
6 2643221609 Acidovorax sp. Root217 Isolate Unclassified
7 2643221611 Acidovorax sp. Root219 Isolate Unclassified
8 2643221638 Duganella sp. Root336D2 Isolate Unclassified
9 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
10 2721755523 Delftia sp. HK171 Isolate Unclassified
11 2738543012 Acidovorax sp. CF301 Isolate Unclassified
12 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
13 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
14 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
15 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
16 2816332133 Acidovorax radicis 2721A Isolate Unclassified
17 2818991452 Burkholderia cepacia 561 Isolate Unclassified
18 2831864461 Roseateles noduli HZ7 Isolate Nodule
19 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
20 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
21 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
22 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
23 2904564687 Burkholderia sp. 571 Isolate Unclassified
24 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
25 2917832318 Pseudomonas rhizoryzae RY24 Isolate Unclassified
26 2928170801 Burkholderia sp. 572 Isolate Unclassified
27 2928515477 Acinetobacter bereziniae 1375 Isolate Rhizosphere
28 2928536128 Burkholderia sola 565 Isolate Unclassified
29 2974298342 Pseudomonas sp. SORGH_AS 211 Isolate Unclassified
30 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root
31 2984504281 Pseudomonas psychrotolerans SORGH_AS201 Isolate Aerial Root
32 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
33 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
34 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
35 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
36 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
37 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
38 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
39 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
40 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
41 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
42 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
43 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
44 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
45 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
46 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
47 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
48 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
49 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
50 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
51 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
52 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
53 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
57 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
58 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
69 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
73 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
74 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
79 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
81 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
86 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
103 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
105 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
106 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
111 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
112 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
113 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
114 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
115 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
116 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
117 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
118 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
119 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
121 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
122 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
123 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
124 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
125 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
126 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
127 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
128 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
129 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
130 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
131 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
136 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
137 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
138 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
139 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
140 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
141 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
142 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
143 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
144 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
145 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
146 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
147 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
148 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
149 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
150 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
151 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
152 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
153 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
154 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
155 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
156 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
157 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
158 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
159 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
160 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
166 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
167 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
168 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
175 8002745576 Marinomonas spartinae USM8 Isolate Rhizosphere
176 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
177 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
178 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
179 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
180 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.04
Metatranscriptomes 0.45
Isolates 16.52

Biome Distribution

Category Percentage (%)
Aerial Root 0.89
Bulb 0
Endosphere 25
Nodule 1.79
Rhizoplane 4.46
Rhizosphere 53.57
Stem 0
Stem Tuber 0
Unclassified 14.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10002358 3300003316 Bacteria 16866
2 rootL2_10004551 3300003322 Bacteria 35693
3 rootH1_10023346 3300003323 Bacteria 13402
4 JGI25161J50226_1000276 3300003374 Bacteria 29758
5 Ga0055532_1000217 3300003758 Bacteria 44081
6 Ga0055535_1000212 3300003761 Bacteria 61691
7 Ga0055542_1000238 3300003762 Bacteria 63399
8 Ga0055529_1000270 3300003763 Bacteria 61712
9 Ga0055526_1000452 3300003771 Bacteria 32762
10 Ga0055524_1000476 3300003775 Bacteria 31968
11 Ga0055524_1002309 3300003775 Bacteria 9931
12 Ga0055534_1000127 3300003784 Bacteria 57100
13 Ga0055534_1004947 3300003784 Bacteria 3710
14 Ga0055528_1000063 3300003790 Bacteria 85587
15 Ga0055531_10000684 3300003794 Bacteria 28877
16 Ga0055531_10011157 3300003794 Bacteria 4370
17 Ga0055543_1002437 3300004625 Bacteria 6155
18 Ga0065165_1000034 3300005262 Bacteria 214644
19 Ga0065165_1000407 3300005262 Bacteria 68987
20 Ga0065165_1000495 3300005262 Bacteria 60868
21 Ga0070660_100000003 3300005339 Bacteria 176884
22 Ga0070659_100000024 3300005366 Bacteria 148685
23 Ga0070681_10014210 3300005458 Bacteria 7922
24 Ga0070679_100059409 3300005530 Bacteria 3811
25 Ga0068855_100017806 3300005563 Bacteria 8541
26 Ga0068855_100095193 3300005563 Bacteria 3433
27 Ga0068856_100043671 3300005614 Bacteria 4410
28 Ga0070717_10011024 3300006028 Bacteria 6846
29 Ga0097621_100059452 3300006237 Bacteria 3129
30 Ga0068871_100065833 3300006358 Bacteria 2969
31 Ga0099823_1000014 3300006944 Bacteria 89398
32 Ga0079104_1000007 3300006946 Bacteria 390531
33 Ga0105251_10000143 3300009011 Bacteria 72715
34 Ga0105240_10065117 3300009093 Bacteria 4525
35 Ga0114129_10011675 3300009147 Bacteria 12502
36 Ga0105243_10003331 3300009148 Bacteria 13036
37 Ga0105249_10005467 3300009553 Bacteria 10970
38 Ga0105239_10071957 3300010375 Bacteria 3799
39 Ga0157319_1000002 3300012497 Bacteria 410803
40 Ga0157373_10000184 3300013100 Bacteria 51738
41 Ga0157371_10003469 3300013102 Bacteria 14284
42 Ga0157369_10001155 3300013105 Bacteria 32917
43 Ga0182008_10001342 3300014497 Bacteria 16729
44 Ga0182008_10008783 3300014497 Bacteria 5491
45 Ga0182007_10000106 3300015262 Bacteria 59012
46 Ga0182007_10000651 3300015262 Bacteria 19925
47 Ga0163161_10001320 3300017792 Bacteria 18476
48 Ga0163161_10028499 3300017792 Bacteria 3966
49 Ga0163161_10076342 3300017792 Bacteria 2459
50 Ga0206353_11480351 3300020082 Bacteria 4290
51 Ga0213872_10000065 3300021361 Bacteria 96648
52 Ga0213872_10000096 3300021361 Bacteria 80925
53 Ga0213872_10037404 3300021361 Bacteria 2215
54 Ga0209436_100040 3300025208 Bacteria 75392
55 Ga0209436_101966 3300025208 Bacteria 6580
56 Ga0209566_100408 3300025225 Bacteria 34108
57 Ga0209674_101853 3300025226 Bacteria 5018
58 Ga0209672_100065 3300025228 Bacteria 198168
59 Ga0209147_100044 3300025229 Bacteria 300330
60 Ga0209147_100124 3300025229 Bacteria 133627
61 Ga0207427_100272 3300025231 Bacteria 39011
62 Ga0209258_100031 3300025242 Bacteria 463572
63 Ga0207425_1000036 3300025245 Bacteria 225783
64 Ga0209148_1000027 3300025254 Bacteria 616374
65 Ga0209565_1000074 3300025263 Bacteria 164237
66 Ga0209565_1008609 3300025263 Bacteria 2649
67 Ga0209455_1000058 3300025272 Bacteria 342028
68 Ga0209673_1000059 3300025273 Bacteria 268892
69 Ga0209673_1000129 3300025273 Bacteria 164238
70 Ga0209673_1004594 3300025273 Bacteria 7321
71 Ga0209130_1000016 3300025284 Bacteria 395540
72 Ga0209130_1000217 3300025284 Bacteria 75515
73 Ga0209130_1003194 3300025284 Bacteria 7240
74 Ga0209675_1000072 3300025291 Bacteria 164237
75 Ga0209564_1000030 3300025295 Bacteria 503296
76 Ga0209564_1000160 3300025295 Bacteria 164214
77 Ga0209564_1008156 3300025295 Bacteria 5237
78 Ga0209564_1017854 3300025295 Bacteria 2737
79 Ga0209050_1000040 3300025298 Bacteria 408492
80 Ga0209050_1000309 3300025298 Bacteria 99432
81 Ga0209050_1004916 3300025298 Bacteria 8736
82 Ga0209050_1005270 3300025298 Bacteria 8231
83 Ga0209256_1000125 3300025299 Bacteria 165336
84 Ga0209256_1000236 3300025299 Bacteria 98648
85 Ga0209256_1000553 3300025299 Bacteria 53682
86 Ga0209256_1000594 3300025299 Bacteria 50389
87 Ga0209051_1003316 3300025303 Bacteria 10658
88 Ga0209257_1000054 3300025304 Bacteria 416957
89 Ga0209257_1000393 3300025304 Bacteria 86777
90 Ga0209257_1000723 3300025304 Bacteria 50410
91 Ga0207713_1000156 3300025735 Bacteria 102640
92 Ga0207707_10000281 3300025912 Bacteria 54266
93 Ga0207695_10049779 3300025913 Bacteria 4413
94 Ga0207657_10000002 3300025919 Bacteria 444378
95 Ga0207652_10003751 3300025921 Bacteria 12461
96 Ga0207694_10101600 3300025924 Bacteria 2279
97 Ga0207690_10000014 3300025932 Bacteria 263016
98 Ga0207709_10000112 3300025935 Bacteria 127357
99 Ga0207667_10009327 3300025949 Bacteria 11574
100 Ga0207683_10089504 3300026121 Bacteria 2740
101 Ga0209281_1000020 3300027111 Bacteria 575972
102 Ga0209371_1000129 3300027312 Bacteria 124523
103 Ga0209371_1005656 3300027312 Bacteria 4893
104 Ga0307515_10015260 3300028794 Bacteria 14167
105 Ga0268256_1000133 3300030500 Bacteria 102725
106 Ga0268256_1002444 3300030500 Bacteria 9481
107 Ga0268256_1005594 3300030500 Bacteria 4893
108 Ga0265332_10000033 3300031238 Bacteria 153334
109 Ga0265327_10010110 3300031251 Bacteria 6688
110 Ga0265316_10000005 3300031344 Bacteria 304442
111 Ga0307408_100000201 3300031548 Bacteria 64686
112 Ga0307408_100000347 3300031548 Bacteria 43439
113 Ga0307408_100000916 3300031548 Bacteria 23009
114 Ga0307408_100005303 3300031548 Bacteria 8633
115 Ga0307408_100022148 3300031548 Bacteria 4312
116 Ga0307408_100054467 3300031548 Bacteria 2892
117 Ga0307514_10001233 3300031649 Bacteria 33776
118 Ga0265314_10022779 3300031711 Bacteria 4793
119 Ga0307516_10000268 3300031730 Bacteria 66758
120 Ga0307406_10001880 3300031901 Bacteria 11460
121 Ga0373923_0012669 3300035111 Bacteria 3124
122 Ga0373936_0008565 3300035113 Bacteria 3851
123 Ga0373957_0011913 3300035120 Bacteria 2915
124 Ga0373955_0020264 3300035172 Bacteria 3340
125 Ga0373927_0000002 3300035695 Bacteria 966219
126 Ga0373925_0009633 3300037068 Bacteria 7038
127 Ga0395905_0001379 3300037471 Bacteria 29458
128 Ga0400484_07557 3300038725 Bacteria 17590
129 Ga0400491_25810 3300038727 Bacteria 5466
130 Ga0400488_28572 3300038741 Bacteria 7725
131 Ga0400489_93347 3300039093 Bacteria 17914
132 Ga0400487_34657 3300039110 Bacteria 5224
133 Ga0436361_0195040 3300039447 Bacteria 22732
134 Ga0436361_0199322 3300039447 Bacteria 7066
135 Ga0436361_0739639 3300039447 Bacteria 38673
136 Ga0436361_0828895 3300039447 Bacteria 5445
137 Ga0436361_1089962 3300039447 Bacteria 8381
138 Ga0439459_0000142 3300042438 Bacteria 7237
139 Ga0450918_001894 3300042531 Bacteria 4042
140 Ga0466966_0036793 3300044684 Bacteria 3159
141 Ga0466961_0011142 3300044693 Bacteria 5747
142 Ga0466963_0014757 3300044694 Bacteria 4823
143 Ga0451576_0002030 3300045051 Bacteria 31965
144 Ga0451576_0049694 3300045051 Bacteria 4401
145 Ga0495650_0000297 3300046471 Bacteria 90619
146 Ga0495580_0002035 3300046472 Bacteria 17782
147 Ga0495582_0008552 3300046473 Bacteria 5647
148 Ga0495639_0001928 3300046475 Bacteria 9204
149 Ga0495662_0030068 3300046476 Bacteria 2622
150 Ga0495584_0002988 3300046491 Bacteria 9386
151 Ga0495583_0014736 3300046506 Bacteria 4293
152 Ga0495606_0002720 3300046507 Bacteria 19937
153 Ga0495618_0031312 3300046514 Bacteria 3327
154 Ga0495630_0035467 3300046517 Bacteria 3727
155 Ga0495640_0018161 3300046533 Bacteria 5226
156 Ga0495609_0000127 3300046538 Bacteria 82467
157 Ga0495622_0000326 3300046557 Bacteria 35065
158 Ga0495668_0000066 3300046616 Bacteria 178533
159 Ga0495668_0001137 3300046616 Bacteria 27257
160 Ga0495625_0000824 3300046660 Bacteria 42730
161 Ga0495659_0000651 3300046664 Bacteria 12585
162 Ga0495647_0005792 3300046681 Bacteria 4065
163 Ga0495658_0026304 3300046683 Bacteria 3117
164 Ga0495624_0008231 3300046690 Bacteria 7291
165 Ga0495649_0002875 3300046694 Bacteria 11936
166 Ga0495636_0001397 3300047318 Bacteria 9114
167 Ga0495674_0053074 3300047319 Bacteria 3565
168 Ga0495672_0008803 3300047320 Bacteria 7390
169 Ga0495684_0011161 3300047471 Bacteria 6942
170 Ga0495686_0049849 3300047472 Bacteria 2633
171 Ga0496101_0000727 3300048904 Bacteria 19615
172 Ga0496102_0019782 3300048905 Bacteria 5934
173 Ga0496103_0008492 3300048906 Bacteria 6102
174 Ga0496104_0009766 3300048907 Bacteria 8557
175 Ga0496105_0034684 3300048908 Bacteria 4150
176 Ga0496109_0001092 3300048912 Bacteria 22489
177 Ga0496110_0010995 3300048913 Bacteria 7386
178 Ga0496111_0023794 3300048914 Bacteria 4303
179 Ga0496126_0090049 3300048929 Bacteria 2700
180 Ga0495678_018597 3300049459 Bacteria 3120
181 Ga0501033_0008236 3300049570 Bacteria 8072
182 Ga0501072_0015220 3300049588 Bacteria 5897
183 Ga0501035_0000714 3300049822 Bacteria 35935
184 nmdc:mga07m45_3958_c1 3300050496 Bacteria 7200
185 nmdc:mga05p37_166698_c1 3300050507 Bacteria 2688
186 Ga0500622_0011225 3300053156 Bacteria 4889
187 Ga0501082_0017848 3300060353 Bacteria 6111

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046476 Ga0495662_0030068 Ga0495662_0030068_14_1960 639
2 3300039447 Ga0436361_0739639 Ga0436361_0739639_7180_9657 643
3 3300021361 Ga0213872_10000096 Ga0213872_1000009628 649
4 3300035111 Ga0373923_0012669 Ga0373923_0012669_1133_3112 650
5 3300048912 Ga0496109_0001092 Ga0496109_0001092_10192_12216 650
6 3300005458 Ga0070681_10014210 Ga0070681_100142105 652
7 3300005530 Ga0070679_100059409 Ga0070679_1000594092 652
8 3300006358 Ga0068871_100065833 Ga0068871_1000658332 652
9 3300025912 Ga0207707_10000281 Ga0207707_1000028140 652
10 3300025921 Ga0207652_10003751 Ga0207652_100037512 652
11 3300035695 Ga0373927_0000002 Ga0373927_0000002_936510_938525 653
12 3300047320 Ga0495672_0008803 Ga0495672_0008803_4203_6263 654
13 3300009147 Ga0114129_10011675 Ga0114129_100116755 655
14 3300035120 Ga0373957_0011913 Ga0373957_0011913_63_2057 655
15 3300050507 nmdc:mga05p37_166698_c1 nmdc:mga05p37_166698_c1_317_2338 655
16 3300046557 Ga0495622_0000326 Ga0495622_0000326_26151_28181 656
17 3300044684 Ga0466966_0036793 Ga0466966_0036793_891_2912 658
18 3300038741 Ga0400488_28572 Ga0400488_28572_4836_6827 659
19 3300048929 Ga0496126_0090049 Ga0496126_0090049_313_2373 662
20 3300006946 Ga0079104_1000007 Ga0079104_1000007202 664
21 3300009148 Ga0105243_10003331 Ga0105243_1000333110 664
22 3300025935 Ga0207709_10000112 Ga0207709_1000011250 664
23 3300027111 Ga0209281_1000020 Ga0209281_1000020295 664
24 iso_pu_bacteria 8002745576 8002748353 664
25 3300006028 Ga0070717_10011024 Ga0070717_100110244 665
26 iso_pu_bacteria 2643221603 2644030223 666
27 iso_pu_bacteria 2899359706 2899368731 666
28 3300005563 Ga0068855_100095193 Ga0068855_1000951932 667
29 iso_pu_bacteria 2643221554 2643792436 667
30 iso_pu_bacteria 2643221638 2644217047 667
31 iso_pu_bacteria 2643221644 2644243959 667
32 iso_pu_bacteria 2721755523 2722883300 667
33 iso_pu_bacteria 2808606384 2808969623 667
34 iso_pu_bacteria 2808606390 2809004733 667
35 iso_pu_bacteria 2808606391 2809011328 667
36 iso_pu_bacteria 2928515477 2928516983 667
37 3300013100 Ga0157373_10000184 Ga0157373_1000018440 668
38 3300017792 Ga0163161_10076342 Ga0163161_100763422 668
39 3300038725 Ga0400484_07557 Ga0400484_07557_9243_11306 668
40 iso_pu_bacteria 2515154189 2516019920 668
41 iso_pu_bacteria 2599185239 2599740601 668
42 iso_pu_bacteria 2818991452 2819637071 668
43 iso_pu_bacteria 2863421361 2863427512 668
44 iso_pu_bacteria 2904564687 2904566363 668
45 iso_pu_bacteria 2904571731 2904573407 668
46 iso_pu_bacteria 2928170801 2928176615 668
47 iso_pu_bacteria 2928536128 2928542794 668
48 iso_pu_bacteria 8018845410 8018850659 668
49 iso_pu_bacteria 8020938398 8020944578 668
50 iso_pu_bacteria 8020953355 8020959983 668
51 iso_pu_bacteria 8021120328 8021123061 668
52 3300006237 Ga0097621_100059452 Ga0097621_1000594521 669
53 3300039093 Ga0400489_93347 Ga0400489_93347_7455_9518 669
54 iso_pu_bacteria 8004025490 8004026075 669
55 3300021361 Ga0213872_10000065 Ga0213872_1000006571 670
56 3300021361 Ga0213872_10037404 Ga0213872_100374041 670
57 3300025263 Ga0209565_1008609 Ga0209565_10086092 670
58 3300025273 Ga0209673_1000059 Ga0209673_100005958 670
59 3300025295 Ga0209564_1017854 Ga0209564_10178541 670
60 3300027312 Ga0209371_1005656 Ga0209371_10056563 670
61 3300030500 Ga0268256_1005594 Ga0268256_10055943 670
62 3300031711 Ga0265314_10022779 Ga0265314_100227795 670
63 3300039447 Ga0436361_0199322 Ga0436361_0199322_5023_7041 670
64 3300039447 Ga0436361_0828895 Ga0436361_0828895_26_2044 670
65 3300048913 Ga0496110_0010995 Ga0496110_0010995_4224_6248 670
66 iso_pu_bacteria 2643221609 2644062061 670
67 iso_pu_bacteria 2643221611 2644070891 670
68 iso_pu_bacteria 2883087390 2883089093 670
69 3300003323 rootH1_10023346 rootH1_100233468 671
70 3300003374 JGI25161J50226_1000276 JGI25161J50226_10002763 671
71 3300003758 Ga0055532_1000217 Ga0055532_100021731 671
72 3300003761 Ga0055535_1000212 Ga0055535_100021228 671
73 3300003762 Ga0055542_1000238 Ga0055542_100023832 671
74 3300003763 Ga0055529_1000270 Ga0055529_100027031 671
75 3300003775 Ga0055524_1002309 Ga0055524_10023094 671
76 3300003784 Ga0055534_1000127 Ga0055534_100012724 671
77 3300003784 Ga0055534_1004947 Ga0055534_10049473 671
78 3300003790 Ga0055528_1000063 Ga0055528_100006358 671
79 3300004625 Ga0055543_1002437 Ga0055543_10024373 671
80 3300005262 Ga0065165_1000034 Ga0065165_1000034149 671
81 3300005262 Ga0065165_1000495 Ga0065165_10004953 671
82 3300005563 Ga0068855_100017806 Ga0068855_1000178066 671
83 3300005614 Ga0068856_100043671 Ga0068856_1000436715 671
84 3300009093 Ga0105240_10065117 Ga0105240_100651173 671
85 3300009553 Ga0105249_10005467 Ga0105249_100054674 671
86 3300010375 Ga0105239_10071957 Ga0105239_100719573 671
87 3300013102 Ga0157371_10003469 Ga0157371_100034697 671
88 3300013105 Ga0157369_10001155 Ga0157369_100011553 671
89 3300014497 Ga0182008_10001342 Ga0182008_100013424 671
90 3300014497 Ga0182008_10008783 Ga0182008_100087833 671
91 3300015262 Ga0182007_10000106 Ga0182007_1000010632 671
92 3300015262 Ga0182007_10000651 Ga0182007_1000065113 671
93 3300017792 Ga0163161_10001320 Ga0163161_100013204 671
94 3300017792 Ga0163161_10028499 Ga0163161_100284992 671
95 3300025208 Ga0209436_100040 Ga0209436_10004060 671
96 3300025208 Ga0209436_101966 Ga0209436_1019665 671
97 3300025225 Ga0209566_100408 Ga0209566_10040815 671
98 3300025226 Ga0209674_101853 Ga0209674_1018534 671
99 3300025228 Ga0209672_100065 Ga0209672_100065141 671
100 3300025229 Ga0209147_100044 Ga0209147_10004462 671
101 3300025229 Ga0209147_100124 Ga0209147_10012480 671
102 3300025231 Ga0207427_100272 Ga0207427_10027232 671
103 3300025242 Ga0209258_100031 Ga0209258_100031141 671
104 3300025245 Ga0207425_1000036 Ga0207425_1000036166 671
105 3300025254 Ga0209148_1000027 Ga0209148_1000027141 671
106 3300025263 Ga0209565_1000074 Ga0209565_100007497 671
107 3300025272 Ga0209455_1000058 Ga0209455_100005899 671
108 3300025273 Ga0209673_1000129 Ga0209673_100012964 671
109 3300025284 Ga0209130_1000016 Ga0209130_100001659 671
110 3300025284 Ga0209130_1000217 Ga0209130_100021717 671
111 3300025284 Ga0209130_1003194 Ga0209130_10031945 671
112 3300025291 Ga0209675_1000072 Ga0209675_100007264 671
113 3300025295 Ga0209564_1000160 Ga0209564_100016063 671
114 3300025295 Ga0209564_1008156 Ga0209564_10081561 671
115 3300025298 Ga0209050_1000040 Ga0209050_100004032 671
116 3300025298 Ga0209050_1000309 Ga0209050_100030935 671
117 3300025298 Ga0209050_1004916 Ga0209050_10049166 671
118 3300025299 Ga0209256_1000125 Ga0209256_100012564 671
119 3300025299 Ga0209256_1000553 Ga0209256_100055340 671
120 3300025304 Ga0209257_1000054 Ga0209257_1000054366 671
121 3300025913 Ga0207695_10049779 Ga0207695_100497793 671
122 3300025924 Ga0207694_10101600 Ga0207694_101016001 671
123 3300025949 Ga0207667_10009327 Ga0207667_1000932710 671
124 3300026121 Ga0207683_10089504 Ga0207683_100895043 671
125 3300027312 Ga0209371_1000129 Ga0209371_100012953 671
126 3300028794 Ga0307515_10015260 Ga0307515_100152605 671
127 3300030500 Ga0268256_1000133 Ga0268256_100013342 671
128 3300030500 Ga0268256_1002444 Ga0268256_10024448 671
129 3300031238 Ga0265332_10000033 Ga0265332_10000033113 671
130 3300031251 Ga0265327_10010110 Ga0265327_100101105 671
131 3300031548 Ga0307408_100000347 Ga0307408_10000034740 671
132 3300031548 Ga0307408_100000916 Ga0307408_10000091612 671
133 3300031548 Ga0307408_100005303 Ga0307408_1000053036 671
134 3300031548 Ga0307408_100022148 Ga0307408_1000221484 671
135 3300031649 Ga0307514_10001233 Ga0307514_1000123310 671
136 3300031730 Ga0307516_10000268 Ga0307516_1000026816 671
137 3300035113 Ga0373936_0008565 Ga0373936_0008565_1473_3533 671
138 3300035172 Ga0373955_0020264 Ga0373955_0020264_933_2993 671
139 3300037068 Ga0373925_0009633 Ga0373925_0009633_4285_6345 671
140 3300037471 Ga0395905_0001379 Ga0395905_0001379_2830_4851 671
141 3300038727 Ga0400491_25810 Ga0400491_25810_178_2211 671
142 3300039110 Ga0400487_34657 Ga0400487_34657_394_2427 671
143 3300039447 Ga0436361_0195040 Ga0436361_0195040_5078_7108 671
144 3300039447 Ga0436361_1089962 Ga0436361_1089962_3144_5174 671
145 3300042531 Ga0450918_001894 Ga0450918_001894_281_2302 671
146 3300046471 Ga0495650_0000297 Ga0495650_0000297_24682_26712 671
147 3300046472 Ga0495580_0002035 Ga0495580_0002035_13531_15591 671
148 3300046473 Ga0495582_0008552 Ga0495582_0008552_3053_5113 671
149 3300046475 Ga0495639_0001928 Ga0495639_0001928_911_2932 671
150 3300046491 Ga0495584_0002988 Ga0495584_0002988_3772_5793 671
151 3300046506 Ga0495583_0014736 Ga0495583_0014736_933_2954 671
152 3300046507 Ga0495606_0002720 Ga0495606_0002720_15574_17604 671
153 3300046514 Ga0495618_0031312 Ga0495618_0031312_168_2228 671
154 3300046517 Ga0495630_0035467 Ga0495630_0035467_282_2342 671
155 3300046533 Ga0495640_0018161 Ga0495640_0018161_1160_3220 671
156 3300046538 Ga0495609_0000127 Ga0495609_0000127_62451_64472 671
157 3300046616 Ga0495668_0000066 Ga0495668_0000066_118654_120675 671
158 3300046616 Ga0495668_0001137 Ga0495668_0001137_22464_24485 671
159 3300046660 Ga0495625_0000824 Ga0495625_0000824_1457_3478 671
160 3300046664 Ga0495659_0000651 Ga0495659_0000651_3483_5504 671
161 3300046681 Ga0495647_0005792 Ga0495647_0005792_1689_3749 671
162 3300046683 Ga0495658_0026304 Ga0495658_0026304_932_2992 671
163 3300046690 Ga0495624_0008231 Ga0495624_0008231_2195_4255 671
164 3300046694 Ga0495649_0002875 Ga0495649_0002875_7260_9281 671
165 3300047318 Ga0495636_0001397 Ga0495636_0001397_1585_3606 671
166 3300047319 Ga0495674_0053074 Ga0495674_0053074_835_2895 671
167 3300047471 Ga0495684_0011161 Ga0495684_0011161_950_3010 671
168 3300047472 Ga0495686_0049849 Ga0495686_0049849_496_2517 671
169 3300048904 Ga0496101_0000727 Ga0496101_0000727_1624_3645 671
170 3300048905 Ga0496102_0019782 Ga0496102_0019782_1725_3746 671
171 3300048906 Ga0496103_0008492 Ga0496103_0008492_180_2201 671
172 3300048907 Ga0496104_0009766 Ga0496104_0009766_216_2237 671
173 3300048908 Ga0496105_0034684 Ga0496105_0034684_2042_4063 671
174 3300048914 Ga0496111_0023794 Ga0496111_0023794_1040_3061 671
175 3300049459 Ga0495678_018597 Ga0495678_018597_990_3011 671
176 3300049570 Ga0501033_0008236 Ga0501033_0008236_5968_8013 671
177 3300049588 Ga0501072_0015220 Ga0501072_0015220_1853_3910 671
178 3300049822 Ga0501035_0000714 Ga0501035_0000714_32232_34277 671
179 3300060353 Ga0501082_0017848 Ga0501082_0017848_3094_5151 671
180 iso_pu_bacteria 2738543012 2739243979 671
181 iso_pu_bacteria 2773857672 2774130227 671
182 iso_pu_bacteria 2816332133 2816472820 671
183 iso_pu_bacteria 2917832318 2917832451 671
184 iso_pu_bacteria 2974298342 2974300597 671
185 iso_pu_bacteria 2984499530 2984502979 671
186 iso_pu_bacteria 2984504281 2984508459 671
187 3300009011 Ga0105251_10000143 Ga0105251_1000014319 672
188 3300025735 Ga0207713_1000156 Ga0207713_100015672 672
189 3300031548 Ga0307408_100000201 Ga0307408_10000020111 672
190 3300031901 Ga0307406_10001880 Ga0307406_100018808 672
191 iso_pu_bacteria 2600254954 2600446398 672
192 3300005339 Ga0070660_100000003 Ga0070660_10000000378 674
193 3300005366 Ga0070659_100000024 Ga0070659_10000002456 674
194 3300020082 Ga0206353_11480351 Ga0206353_114803514 674
195 3300025919 Ga0207657_10000002 Ga0207657_10000002302 674
196 3300025932 Ga0207690_10000014 Ga0207690_1000001478 674
197 3300031344 Ga0265316_10000005 Ga0265316_1000000561 674
198 3300044693 Ga0466961_0011142 Ga0466961_0011142_3067_5103 674
199 3300045051 Ga0451576_0002030 Ga0451576_0002030_27309_29411 676
200 3300045051 Ga0451576_0049694 Ga0451576_0049694_399_2501 676
201 iso_pu_bacteria 2831864461 2831864755 682
202 iso_pu_bacteria 2886848708 2886849816 682
203 3300003316 rootH1_10002358 rootH1_1000235812 686
204 3300003322 rootL2_10004551 rootL2_1000455131 686
205 3300003771 Ga0055526_1000452 Ga0055526_100045226 686
206 3300003775 Ga0055524_1000476 Ga0055524_100047614 686
207 3300003794 Ga0055531_10000684 Ga0055531_1000068417 686
208 3300003794 Ga0055531_10011157 Ga0055531_100111572 686
209 3300005262 Ga0065165_1000407 Ga0065165_10004073 686
210 3300006944 Ga0099823_1000014 Ga0099823_100001455 686
211 3300012497 Ga0157319_1000002 Ga0157319_1000002115 686
212 3300025273 Ga0209673_1004594 Ga0209673_10045945 686
213 3300025295 Ga0209564_1000030 Ga0209564_1000030377 686
214 3300025298 Ga0209050_1005270 Ga0209050_10052702 686
215 3300025299 Ga0209256_1000236 Ga0209256_100023674 686
216 3300025299 Ga0209256_1000594 Ga0209256_100059441 686
217 3300025303 Ga0209051_1003316 Ga0209051_10033167 686
218 3300025304 Ga0209257_1000393 Ga0209257_100039324 686
219 3300025304 Ga0209257_1000723 Ga0209257_100072318 686
220 3300031548 Ga0307408_100054467 Ga0307408_1000544671 686
221 3300042438 Ga0439459_0000142 Ga0439459_0000142_3908_5968 686
222 3300044694 Ga0466963_0014757 Ga0466963_0014757_267_2327 686
223 3300050496 nmdc:mga07m45_3958_c1 nmdc:mga07m45_3958_c1_94_2154 686
224 3300053156 Ga0500622_0011225 Ga0500622_0011225_1294_3354 686

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00724

Oxidored_FMN

NADH:flavin oxidoreductase / NADH oxidase family

6

332

0.97

PF00890

FAD_binding_2

FAD binding domain

377

418

0.93

PF12680

SnoaL_2

SnoaL-like domain

677

775

0.89

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

380

434

0.89

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

376

630

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ps9-assembly1.cif.gz_A the crystal structure and reaction mechanism of e. coli 2,4-dienoyl coa reductase 0.9846 3 686
1ps9-assembly1.cif.gz_A the crystal structure and reaction mechanism of e. coli 2,4-dienoyl coa reductase 0.9832 3 686
7e7h-assembly2.cif.gz_B crystal structure of a pseudooxynicotine amine oxidase pnao from pseudomonas putida s16 0.9773 385 419
2bi8-assembly1.cif.gz_A udp-galactopyranose mutase from klebsiella pneumoniae with reduced fad 0.9704 382 421
3inr-assembly1.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (oxidized) 0.9638 382 421
ID Description Score Start End Superfamily
af_A0A1D6E7M3_47_537_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9902 386 421 3.50.50.60
af_Q4DKB3_4_381_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9881 4 369 3.20.20.70
af_Q2FZ31_2_179_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9785 384 414 3.50.50.60
af_B0G160_35_582_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9765 386 417 3.50.50.60
af_Q4DZ00_1_394_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9583 6 382 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A455UA95-F1-model_v4 NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein 0.9959 56 203 GO:0008670
GO:0010181
GO:0033543
AF-A0A2X3CSG2-F1-model_v4 2,4-dienoyl-CoA reductase (EC 1.3.1.34) 0.9937 73 263 GO:0008670
GO:0010181
GO:0033543
AF-W1XBZ3-F1-model_v4 2,4-dienoyl-CoA reductase NADPH 0.9934 3 239 GO:0008670
GO:0010181
GO:0033543
AF-V1HFP7-F1-model_v4 2,4-dienoyl-CoA reductase (EC 1.3.1.34) 0.9896 3 527 GO:0008670
GO:0010181
GO:0033543
AF-A0R2I2-F1-model_v4 2,4-dienoyl-coA reductase 0.988 4 686 GO:0009056
GO:0010181
GO:0016491

Feature Viewer

pLDDT pTM Quality
92.82 0.91 High
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Predicted Structure (AlphaFold2)

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