F336624

General Info

Members Datasets Scaffolds Average Seq Length
224 131 448 646

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10018466|Ga0111539_100184663
Length 686
Sequence MPPRARAYEGTGVTTDNGAPFSDFLDDYFAECDDHLMGVRRLLLTLEASVGGAEINRNVLDELFRHFHSLKGISGMVELRAAEDLAHCLEEYLRALRQGDVALTAEGVGLLFDGAQTLEQVIAARRAGTPAPAIDALVSRISRIVAEGARDRAVATLPGSPQAQGEPSGSVRPAAARWRCTFSPSAELVARGIRVDAVRRRLSEAGEILNAVPRVTTGGAIAFEFDIAADLDEPTLAAWRGDGLAIEPLAAPERAGSPTPDAPAATLEPAAPADAEPGQAGRVAPSHYVRVDLTRLDDLMRNVGDLVISRARLAETLARIERRVPGSEWRAIQENAVVIDRQLRTLREGIMRVRLVPVGEIFRRMPFVVRDLARESGKRVRVELRGQGTEIDKFLIERMMDPVLHLVRNAVSHGIETAEERIAAGKSPEGTIVLSAATAGDIVRIEIADDGRGVDAAAVAARATAAGLPVPQGALDSSQLLSLLCAPGFSTRDESDRASGRGVGMGVVQAAVEELSGSLSLETTPGAGTRFTLDLPVTLAITDALIAIVGAETFAVPQATIREVVEVPVSALLQVERNEMTTYRGAALPIVRLGRLFGLPDSGRDRLHVFVIGTGAAALGIAVDRIIGQREIVVRAVADALVRVEGISGATDLGDGQVVLILDPAVLARHMRERPDRVFTATGAAR

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
98 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
99 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
102 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
103 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
104 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
105 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
106 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
107 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
108 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
109 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
112 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
113 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.79
Nodule 0
Rhizoplane 1.34
Rhizosphere 95.98
Stem 0
Stem Tuber 0
Unclassified 8.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10018466 3300009094 Bacteria 8636
2 Ga0065707_10002316 3300005295 Bacteria 4876
3 Ga0070683_100022622 3300005329 Bacteria 5621
4 Ga0070690_100008942 3300005330 Bacteria 5788
5 Ga0070670_100010674 3300005331 Bacteria 7846
6 Ga0070670_100015689 3300005331 Bacteria 6502
7 Ga0070666_10003120 3300005335 Bacteria 10067
8 Ga0070660_100002797 3300005339 Bacteria 11989
9 Ga0070689_100042230 3300005340 Bacteria 3501
10 Ga0070691_10008292 3300005341 Bacteria 4760
11 Ga0070669_100000771 3300005353 Bacteria 23293
12 Ga0070675_100002293 3300005354 Bacteria 14205
13 Ga0070675_100017327 3300005354 Bacteria 5723
14 Ga0070674_100007351 3300005356 Bacteria 6495
15 Ga0070674_100017065 3300005356 Bacteria 4558
16 Ga0070673_100007624 3300005364 Bacteria 7162
17 Ga0070673_100026684 3300005364 Bacteria 4270
18 Ga0070673_100056568 3300005364 Bacteria 3095
19 Ga0070659_100074112 3300005366 Bacteria 2711
20 Ga0070667_100114647 3300005367 Unclassified 2340
21 Ga0070703_10000226 3300005406 Bacteria 27161
22 Ga0070701_10000444 3300005438 Bacteria 14134
23 Ga0070705_100000530 3300005440 Bacteria 22014
24 Ga0070705_100047197 3300005440 Bacteria 2488
25 Ga0070705_100075728 3300005440 Bacteria 2050
26 Ga0070700_100022243 3300005441 Bacteria 3695
27 Ga0070708_100055555 3300005445 Unclassified 3521
28 Ga0070663_100041824 3300005455 Bacteria 3217
29 Ga0070678_100026652 3300005456 Bacteria 3912
30 Ga0070662_100042513 3300005457 Bacteria 3246
31 Ga0068867_100001321 3300005459 Bacteria 17174
32 Ga0068867_100017027 3300005459 Bacteria 5165
33 Ga0068867_100020193 3300005459 Bacteria 4748
34 Ga0070706_100000208 3300005467 Bacteria 72971
35 Ga0070699_100000004 3300005518 Bacteria 404262
36 Ga0070679_100045435 3300005530 Bacteria 4377
37 Ga0070684_100000288 3300005535 Bacteria 35083
38 Ga0070684_100099923 3300005535 Bacteria 2590
39 Ga0070672_100015864 3300005543 Bacteria 5378
40 Ga0070672_100016818 3300005543 Bacteria 5247
41 Ga0070686_100023948 3300005544 Bacteria 3655
42 Ga0070695_100000274 3300005545 Bacteria 25892
43 Ga0070695_100044040 3300005545 Unclassified 2839
44 Ga0070696_100000129 3300005546 Bacteria 40516
45 Ga0070696_100026014 3300005546 Unclassified 3981
46 Ga0070696_100044365 3300005546 Bacteria 3079
47 Ga0070693_100002709 3300005547 Bacteria 8142
48 Ga0070704_100019898 3300005549 Bacteria 4320
49 Ga0070704_100025069 3300005549 Bacteria 3922
50 Ga0070664_100000649 3300005564 Bacteria 26683
51 Ga0070664_100020944 3300005564 Bacteria 5386
52 Ga0070664_100113694 3300005564 Unclassified 2364
53 Ga0068857_100002948 3300005577 Bacteria 14020
54 Ga0070702_100036172 3300005615 Bacteria 2733
55 Ga0068859_100002122 3300005617 Bacteria 20181
56 Ga0068859_100041324 3300005617 Bacteria 4631
57 Ga0068866_10005274 3300005718 Bacteria 5327
58 Ga0068861_100005777 3300005719 Bacteria 8395
59 Ga0068870_10000977 3300005840 Bacteria 11268
60 Ga0068863_100019976 3300005841 Bacteria 6407
61 Ga0068858_100108516 3300005842 Bacteria 2591
62 Ga0068860_100084265 3300005843 Bacteria 3024
63 Ga0068860_100122759 3300005843 Bacteria 2488
64 Ga0068862_100002091 3300005844 Bacteria 17993
65 Ga0075364_10002045 3300006051 Bacteria 11257
66 Ga0075367_10000731 3300006178 Bacteria 12765
67 Ga0075367_10007889 3300006178 Bacteria 5482
68 Ga0097621_100063337 3300006237 Bacteria 3039
69 Ga0068871_100022735 3300006358 Bacteria 4838
70 Ga0068871_100043329 3300006358 Unclassified 3614
71 Ga0075428_100000085 3300006844 Bacteria 78003
72 Ga0075428_100000672 3300006844 Bacteria 35089
73 Ga0075428_100001429 3300006844 Bacteria 25472
74 Ga0075428_100007026 3300006844 Bacteria 12486
75 Ga0075428_100009262 3300006844 Bacteria 10919
76 Ga0075428_100015604 3300006844 Bacteria 8421
77 Ga0075430_100000444 3300006846 Bacteria 30826
78 Ga0075430_100003373 3300006846 Bacteria 13371
79 Ga0075430_100028780 3300006846 Bacteria 4719
80 Ga0075431_100026848 3300006847 Bacteria 5906
81 Ga0075431_100029732 3300006847 Bacteria 5625
82 Ga0075431_100130438 3300006847 Bacteria 2593
83 Ga0075429_100000750 3300006880 Bacteria 25454
84 Ga0075429_100001775 3300006880 Bacteria 17862
85 Ga0068865_100010492 3300006881 Bacteria 5767
86 Ga0068865_100031466 3300006881 Bacteria 3538
87 Ga0068865_100052570 3300006881 Bacteria 2824
88 Ga0097620_100002122 3300006931 Bacteria 20181
89 Ga0097620_100041326 3300006931 Bacteria 4631
90 Ga0075435_100001689 3300007076 Bacteria 14336
91 Ga0105240_10088876 3300009093 Bacteria 3780
92 Ga0111539_10000043 3300009094 Bacteria 128570
93 Ga0111539_10002048 3300009094 Bacteria 26960
94 Ga0111539_10002386 3300009094 Bacteria 24942
95 Ga0111539_10003468 3300009094 Bacteria 20768
96 Ga0111539_10004808 3300009094 Bacteria 17619
97 Ga0111539_10004982 3300009094 Bacteria 17277
98 Ga0111539_10031509 3300009094 Bacteria 6440
99 Ga0111539_10040980 3300009094 Bacteria 5571
100 Ga0105245_10010109 3300009098 Bacteria 8218
101 Ga0114129_10001091 3300009147 Bacteria 35628
102 Ga0114129_10017441 3300009147 Bacteria 10223
103 Ga0114129_10042296 3300009147 Bacteria 6416
104 Ga0114129_10124558 3300009147 Bacteria 3544
105 Ga0105243_10029530 3300009148 Bacteria 4217
106 Ga0105243_10041985 3300009148 Bacteria 3578
107 Ga0105242_10006020 3300009176 Bacteria 9352
108 Ga0105248_10052421 3300009177 Bacteria 4578
109 Ga0105248_10058630 3300009177 Bacteria 4324
110 Ga0105248_10098580 3300009177 Bacteria 3293
111 Ga0105249_10002617 3300009553 Bacteria 15593
112 Ga0105249_10122162 3300009553 Bacteria 2476
113 Ga0157375_10001047 3300013308 Bacteria 23871
114 Ga0157380_10003373 3300014326 Bacteria 10961
115 Ga0157380_10011680 3300014326 Bacteria 6350
116 Ga0157380_10026594 3300014326 Bacteria 4394
117 Ga0157380_10032833 3300014326 Bacteria 3994
118 Ga0157380_10125080 3300014326 Bacteria 2184
119 Ga0157379_10004033 3300014968 Bacteria 12515
120 Ga0213876_10017343 3300021384 Bacteria 3802
121 Ga0207653_10000310 3300025885 Bacteria 27298
122 Ga0207645_10007576 3300025907 Bacteria 7654
123 Ga0207643_10002916 3300025908 Bacteria 9237
124 Ga0207684_10000248 3300025910 Bacteria 80978
125 Ga0207662_10005058 3300025918 Bacteria 6987
126 Ga0207657_10013744 3300025919 Bacteria 7925
127 Ga0207652_10030362 3300025921 Bacteria 4526
128 Ga0207681_10002293 3300025923 Bacteria 12160
129 Ga0207659_10000538 3300025926 Bacteria 22634
130 Ga0207670_10027554 3300025936 Bacteria 3594
131 Ga0207670_10033332 3300025936 Unclassified 3318
132 Ga0207704_10014598 3300025938 Bacteria 3971
133 Ga0207691_10010041 3300025940 Bacteria 9084
134 Ga0207691_10013085 3300025940 Bacteria 7943
135 Ga0207691_10075446 3300025940 Bacteria 3040
136 Ga0207679_10004864 3300025945 Bacteria 8374
137 Ga0207667_10088255 3300025949 Bacteria 3208
138 Ga0207651_10050773 3300025960 Bacteria 2818
139 Ga0207712_10019519 3300025961 Bacteria 4428
140 Ga0207712_10034577 3300025961 Bacteria 3425
141 Ga0207677_10037326 3300026023 Bacteria 3175
142 Ga0207703_10068878 3300026035 Unclassified 2916
143 Ga0207708_10011937 3300026075 Bacteria 6471
144 Ga0207708_10012174 3300026075 Bacteria 6416
145 Ga0207708_10035454 3300026075 Bacteria 3796
146 Ga0207708_10042509 3300026075 Bacteria 3464
147 Ga0207708_10070166 3300026075 Unclassified 2683
148 Ga0207641_10010584 3300026088 Bacteria 7568
149 Ga0207648_10003185 3300026089 Bacteria 17290
150 Ga0207648_10021140 3300026089 Bacteria 5851
151 Ga0207648_10025441 3300026089 Bacteria 5272
152 Ga0207676_10048402 3300026095 Unclassified 3300
153 Ga0207674_10021974 3300026116 Bacteria 6860
154 Ga0207674_10041792 3300026116 Bacteria 4739
155 Ga0207675_100008322 3300026118 Bacteria 9772
156 Ga0207675_100009733 3300026118 Bacteria 8998
157 Ga0207675_100014591 3300026118 Bacteria 7322
158 Ga0207675_100042049 3300026118 Bacteria 4266
159 Ga0207675_100069748 3300026118 Bacteria 3285
160 Ga0207683_10014987 3300026121 Bacteria 6598
161 Ga0207428_10000163 3300027907 Bacteria 92085
162 Ga0207428_10009459 3300027907 Bacteria 8731
163 Ga0207428_10010672 3300027907 Bacteria 8192
164 Ga0207428_10011131 3300027907 Bacteria 7983
165 Ga0207428_10011741 3300027907 Bacteria 7725
166 Ga0207428_10036521 3300027907 Bacteria 4007
167 Ga0268266_10016855 3300028379 Bacteria 6243
168 Ga0268266_10064766 3300028379 Unclassified 3158
169 Ga0268265_10000593 3300028380 Bacteria 36472
170 Ga0268265_10028558 3300028380 Bacteria 3995
171 Ga0307405_10006370 3300031731 Bacteria 5801
172 Ga0307410_10056561 3300031852 Bacteria 2668
173 Ga0307407_10001032 3300031903 Bacteria 9616
174 Ga0307412_10014747 3300031911 Bacteria 4617
175 Ga0307412_10061652 3300031911 Unclassified 2522
176 Ga0307409_100031806 3300031995 Bacteria 3815
177 Ga0307409_100036550 3300031995 Unclassified 3611
178 Ga0307411_10021902 3300032005 Unclassified 3752
179 Ga0373930_0003141 3300034816 Bacteria 2604
180 Ga0373928_0003941 3300035084 Unclassified 2832
181 Ga0373929_0000629 3300035085 Bacteria 6806
182 Ga0373951_0003419 3300035091 Bacteria 3852
183 Ga0373932_0004361 3300035112 Unclassified 3354
184 Ga0373939_0001084 3300035114 Bacteria 6695
185 Ga0373960_0000677 3300035121 Bacteria 7029
186 Ga0373942_0000209 3300035207 Bacteria 15209
187 Ga0373937_0033865 3300036401 Bacteria 4644
188 Ga0436365_1206393 3300039437 Bacteria 4020
189 Ga0495643_0005313 3300046522 Bacteria 8736
190 Ga0495645_0014719 3300046543 Bacteria 5555
191 Ga0496108_0000572 3300048911 Bacteria 28789
192 Ga0496109_0037497 3300048912 Bacteria 4379
193 Ga0496113_0117815 3300048916 Bacteria 2074
194 Ga0501031_0033022 3300049568 Bacteria 3375
195 Ga0501034_0004570 3300049571 Bacteria 15340
196 Ga0501034_0021170 3300049571 Bacteria 6632
197 Ga0501043_0024581 3300049579 Bacteria 4727
198 Ga0501047_0003623 3300049581 Bacteria 14552
199 Ga0501075_0007099 3300049591 Bacteria 7747
200 Ga0501044_0010853 3300049823 Bacteria 9883
201 nmdc:mga06z11_9832_c1 3300050494 Bacteria 4046
202 nmdc:mga05p37_1330_c1 3300050507 Bacteria 28719
203 nmdc:mga05p37_60735_c1 3300050507 Bacteria 4653
204 nmdc:mga05p37_87943_c1 3300050507 Bacteria 3830
205 nmdc:mga09592_1225_c1 3300050508 Bacteria 20570
206 nmdc:mga09592_2165_c1 3300050508 Bacteria 15852
207 nmdc:mga0qj67_113145_c1 3300050509 Unclassified 2191
208 nmdc:mga0qj67_2977_c1 3300050509 Bacteria 12158
209 nmdc:mga06r32_123357_c1 3300050510 Unclassified 2557
210 nmdc:mga06r32_15474_c1 3300050510 Bacteria 6925
211 nmdc:mga06r32_669_c1 3300050510 Bacteria 29873
212 nmdc:mga08y16_1116_c1 3300050511 Bacteria 26484
213 nmdc:mga08y16_22217_c1 3300050511 Bacteria 6695
214 nmdc:mga08y16_25_c1 3300050511 Bacteria 235789
215 nmdc:mga08y16_26666_c1 3300050511 Bacteria 6089
216 nmdc:mga08y16_3218_c1 3300050511 Bacteria 16904
217 nmdc:mga08y16_50472_c1 3300050511 Bacteria 4354
218 nmdc:mga08y16_5328_c1 3300050511 Bacteria 13456
219 nmdc:mga08y16_5912_c1 3300050511 Bacteria 12829
220 nmdc:mga08y16_7445_c1 3300050511 Bacteria 11466
221 nmdc:mga08y16_90821_c1 3300050511 Bacteria 3183
222 nmdc:mga0n895_55207_c1 3300050512 Bacteria 3909
223 nmdc:mga0rr50_5161_c1 3300050513 Bacteria 7753
224 Ga0495619_0014578 3300053085 Bacteria 4965
225 Ga0111539_10018466
226 Ga0065707_10002316
227 Ga0070683_100022622
228 Ga0070690_100008942
229 Ga0070670_100010674
230 Ga0070670_100015689
231 Ga0070666_10003120
232 Ga0070660_100002797
233 Ga0070689_100042230
234 Ga0070691_10008292
235 Ga0070669_100000771
236 Ga0070675_100002293
237 Ga0070675_100017327
238 Ga0070674_100007351
239 Ga0070674_100017065
240 Ga0070673_100007624
241 Ga0070673_100026684
242 Ga0070673_100056568
243 Ga0070659_100074112
244 Ga0070667_100114647
245 Ga0070703_10000226
246 Ga0070701_10000444
247 Ga0070705_100000530
248 Ga0070705_100047197
249 Ga0070705_100075728
250 Ga0070700_100022243
251 Ga0070708_100055555
252 Ga0070663_100041824
253 Ga0070678_100026652
254 Ga0070662_100042513
255 Ga0068867_100001321
256 Ga0068867_100017027
257 Ga0068867_100020193
258 Ga0070706_100000208
259 Ga0070699_100000004
260 Ga0070679_100045435
261 Ga0070684_100000288
262 Ga0070684_100099923
263 Ga0070672_100015864
264 Ga0070672_100016818
265 Ga0070686_100023948
266 Ga0070695_100000274
267 Ga0070695_100044040
268 Ga0070696_100000129
269 Ga0070696_100026014
270 Ga0070696_100044365
271 Ga0070693_100002709
272 Ga0070704_100019898
273 Ga0070704_100025069
274 Ga0070664_100000649
275 Ga0070664_100020944
276 Ga0070664_100113694
277 Ga0068857_100002948
278 Ga0070702_100036172
279 Ga0068859_100002122
280 Ga0068859_100041324
281 Ga0068866_10005274
282 Ga0068861_100005777
283 Ga0068870_10000977
284 Ga0068863_100019976
285 Ga0068858_100108516
286 Ga0068860_100084265
287 Ga0068860_100122759
288 Ga0068862_100002091
289 Ga0075364_10002045
290 Ga0075367_10000731
291 Ga0075367_10007889
292 Ga0097621_100063337
293 Ga0068871_100022735
294 Ga0068871_100043329
295 Ga0075428_100000085
296 Ga0075428_100000672
297 Ga0075428_100001429
298 Ga0075428_100007026
299 Ga0075428_100009262
300 Ga0075428_100015604
301 Ga0075430_100000444
302 Ga0075430_100003373
303 Ga0075430_100028780
304 Ga0075431_100026848
305 Ga0075431_100029732
306 Ga0075431_100130438
307 Ga0075429_100000750
308 Ga0075429_100001775
309 Ga0068865_100010492
310 Ga0068865_100031466
311 Ga0068865_100052570
312 Ga0097620_100002122
313 Ga0097620_100041326
314 Ga0075435_100001689
315 Ga0105240_10088876
316 Ga0111539_10000043
317 Ga0111539_10002048
318 Ga0111539_10002386
319 Ga0111539_10003468
320 Ga0111539_10004808
321 Ga0111539_10004982
322 Ga0111539_10031509
323 Ga0111539_10040980
324 Ga0105245_10010109
325 Ga0114129_10001091
326 Ga0114129_10017441
327 Ga0114129_10042296
328 Ga0114129_10124558
329 Ga0105243_10029530
330 Ga0105243_10041985
331 Ga0105242_10006020
332 Ga0105248_10052421
333 Ga0105248_10058630
334 Ga0105248_10098580
335 Ga0105249_10002617
336 Ga0105249_10122162
337 Ga0157375_10001047
338 Ga0157380_10003373
339 Ga0157380_10011680
340 Ga0157380_10026594
341 Ga0157380_10032833
342 Ga0157380_10125080
343 Ga0157379_10004033
344 Ga0213876_10017343
345 Ga0207653_10000310
346 Ga0207645_10007576
347 Ga0207643_10002916
348 Ga0207684_10000248
349 Ga0207662_10005058
350 Ga0207657_10013744
351 Ga0207652_10030362
352 Ga0207681_10002293
353 Ga0207659_10000538
354 Ga0207670_10027554
355 Ga0207670_10033332
356 Ga0207704_10014598
357 Ga0207691_10010041
358 Ga0207691_10013085
359 Ga0207691_10075446
360 Ga0207679_10004864
361 Ga0207667_10088255
362 Ga0207651_10050773
363 Ga0207712_10019519
364 Ga0207712_10034577
365 Ga0207677_10037326
366 Ga0207703_10068878
367 Ga0207708_10011937
368 Ga0207708_10012174
369 Ga0207708_10035454
370 Ga0207708_10042509
371 Ga0207708_10070166
372 Ga0207641_10010584
373 Ga0207648_10003185
374 Ga0207648_10021140
375 Ga0207648_10025441
376 Ga0207676_10048402
377 Ga0207674_10021974
378 Ga0207674_10041792
379 Ga0207675_100008322
380 Ga0207675_100009733
381 Ga0207675_100014591
382 Ga0207675_100042049
383 Ga0207675_100069748
384 Ga0207683_10014987
385 Ga0207428_10000163
386 Ga0207428_10009459
387 Ga0207428_10010672
388 Ga0207428_10011131
389 Ga0207428_10011741
390 Ga0207428_10036521
391 Ga0268266_10016855
392 Ga0268266_10064766
393 Ga0268265_10000593
394 Ga0268265_10028558
395 Ga0307405_10006370
396 Ga0307410_10056561
397 Ga0307407_10001032
398 Ga0307412_10014747
399 Ga0307412_10061652
400 Ga0307409_100031806
401 Ga0307409_100036550
402 Ga0307411_10021902
403 Ga0373930_0003141
404 Ga0373928_0003941
405 Ga0373929_0000629
406 Ga0373951_0003419
407 Ga0373932_0004361
408 Ga0373939_0001084
409 Ga0373960_0000677
410 Ga0373942_0000209
411 Ga0373937_0033865
412 Ga0436365_1206393
413 Ga0495643_0005313
414 Ga0495645_0014719
415 Ga0496108_0000572
416 Ga0496109_0037497
417 Ga0496113_0117815
418 Ga0501031_0033022
419 Ga0501034_0004570
420 Ga0501034_0021170
421 Ga0501043_0024581
422 Ga0501047_0003623
423 Ga0501075_0007099
424 Ga0501044_0010853
425 nmdc:mga06z11_9832_c1
426 nmdc:mga05p37_1330_c1
427 nmdc:mga05p37_60735_c1
428 nmdc:mga05p37_87943_c1
429 nmdc:mga09592_1225_c1
430 nmdc:mga09592_2165_c1
431 nmdc:mga0qj67_113145_c1
432 nmdc:mga0qj67_2977_c1
433 nmdc:mga06r32_123357_c1
434 nmdc:mga06r32_15474_c1
435 nmdc:mga06r32_669_c1
436 nmdc:mga08y16_1116_c1
437 nmdc:mga08y16_22217_c1
438 nmdc:mga08y16_25_c1
439 nmdc:mga08y16_26666_c1
440 nmdc:mga08y16_3218_c1
441 nmdc:mga08y16_50472_c1
442 nmdc:mga08y16_5328_c1
443 nmdc:mga08y16_5912_c1
444 nmdc:mga08y16_7445_c1
445 nmdc:mga08y16_90821_c1
446 nmdc:mga0n895_55207_c1
447 nmdc:mga0rr50_5161_c1
448 Ga0495619_0014578

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01584

CheW

CheW-like domain

543

672

0.95

PF02895

H-kinase_dim

Signal transducing histidine kinase, homodimeric domain

286

353

0.94

PF01627

Hpt

Hpt domain

23

144

0.89

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

396

539

0.89

Map