F336571

General Info

Members Datasets Scaffolds Average Seq Length
224 153 448 523

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100028059|Ga0075430_1000280593
Length 549
Sequence MSRHRTHPTLPHPLLSLLTDKPMKTIRGAALASLLALSTSCKDFLDVNTNPNAPQSVSANLYLAPMLHWMVTSPQFDGRFVARYTQQWTAVSTSVTTWDRMGYDPSSDNGAQQWRDVYWTLGQNLVDMMTKAEAEERWDLLGVGYLLKAWGWLVLTDLHGEIIVKEAINQSTFSFSYDTQEYAYTEVLRLLDEAIELLQKTDGAVDMGYLARGDKIYNGDRTRWLKFAYGMKALTLNHYSNKSSYKPLDVIAAVNQSFTSNLDDALLTYPNTSNDDINFWGRTRGNTTATASTTNGPYRQTLFVLGLMNGTQFGGVVDPRMIRMLSPSPDGQYRGLDPNVVGFGALTTAQQPNNLHGFAGTGGTGVPGRYIFDDKAKIPVITYAQLQFIKAEAALRMGDQATALAAYRNGITSHIDFVNARNLDNNQSPSQITAAEKATFLAAPQIVPATLTLSHIMSQKYIAQWGWGHNELWMDMRRYHYTDLDAVSGTQVFRGFVPPTTLHADNSGKIVQRIRPRFNSEYVWNRPGLDAIGGLALDYHTKPLWITQP

Samples

Sample ID Description Type Environment
1 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
52 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
104 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
107 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
108 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
115 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
116 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
121 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
124 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
125 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
126 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
129 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
130 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
136 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
137 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
138 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
139 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
140 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
141 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
142 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
143 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
144 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
151 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 2818991437 Pedobacter terrae 518 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.21
Metatranscriptomes 1.34
Isolates 0.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.89
Rhizosphere 97.77
Stem 0
Stem Tuber 0
Unclassified 4.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075430_100028059 3300006846 Bacteria 4782
2 Ga0058863_10168554 3300004799 Bacteria 4577
3 Ga0058862_10077823 3300004803 Bacteria 6147
4 Ga0058862_12576472 3300004803 Bacteria 5025
5 Ga0065714_10064525 3300005288 Bacteria 41731
6 Ga0065712_10008739 3300005290 Unclassified 2610
7 Ga0065715_10089266 3300005293 Bacteria 11762
8 Ga0070658_10006606 3300005327 Bacteria 9403
9 Ga0070676_10002547 3300005328 Bacteria 9374
10 Ga0070683_100003244 3300005329 Bacteria 13137
11 Ga0070683_100012729 3300005329 Bacteria 7316
12 Ga0070683_100016022 3300005329 Bacteria 6597
13 Ga0070683_100024396 3300005329 Bacteria 5417
14 Ga0070683_100045345 3300005329 Bacteria 4057
15 Ga0070690_100069444 3300005330 Bacteria 2286
16 Ga0070670_100066047 3300005331 Bacteria 3104
17 Ga0070680_100019298 3300005336 Bacteria 5402
18 Ga0070680_100019648 3300005336 Bacteria 5358
19 Ga0070680_100019816 3300005336 Bacteria 5334
20 Ga0070682_100001078 3300005337 Bacteria 15730
21 Ga0068868_100006312 3300005338 Bacteria 8380
22 Ga0068868_100021930 3300005338 Bacteria 4815
23 Ga0070660_100050586 3300005339 Bacteria 3198
24 Ga0070687_100013030 3300005343 Bacteria 3693
25 Ga0070661_100003070 3300005344 Bacteria 11488
26 Ga0070674_100064671 3300005356 Bacteria 2564
27 Ga0070709_10002086 3300005434 Bacteria 10828
28 Ga0070709_10002230 3300005434 Bacteria 10504
29 Ga0070714_100040582 3300005435 Bacteria 3923
30 Ga0070713_100003693 3300005436 Bacteria 10130
31 Ga0070710_10055853 3300005437 Bacteria 2233
32 Ga0070705_100015327 3300005440 Bacteria 3961
33 Ga0070705_100045864 3300005440 Bacteria 2517
34 Ga0070700_100005203 3300005441 Bacteria 6877
35 Ga0070708_100001261 3300005445 Bacteria 19463
36 Ga0070662_100026843 3300005457 Unclassified 3991
37 Ga0070681_10020423 3300005458 Bacteria 6638
38 Ga0070681_10020709 3300005458 Bacteria 6588
39 Ga0070681_10028235 3300005458 Bacteria 5640
40 Ga0070681_10051505 3300005458 Bacteria 4106
41 Ga0070681_10081919 3300005458 Bacteria 3183
42 Ga0070681_10117587 3300005458 Unclassified 2595
43 Ga0068867_100035462 3300005459 Bacteria 3618
44 Ga0070707_100026156 3300005468 Bacteria 5538
45 Ga0070698_100000089 3300005471 Bacteria 72282
46 Ga0070698_100016161 3300005471 Bacteria 7881
47 Ga0070698_100025234 3300005471 Bacteria 6193
48 Ga0070698_100187348 3300005471 Bacteria 2007
49 Ga0070699_100043866 3300005518 Unclassified 3871
50 Ga0070699_100049133 3300005518 Bacteria 3651
51 Ga0070699_100053159 3300005518 Bacteria 3506
52 Ga0070679_100002135 3300005530 Bacteria 17827
53 Ga0070679_100002878 3300005530 Bacteria 15647
54 Ga0070679_100004676 3300005530 Bacteria 12633
55 Ga0070679_100062783 3300005530 Bacteria 3703
56 Ga0070684_100010168 3300005535 Bacteria 7442
57 Ga0070684_100018987 3300005535 Bacteria 5678
58 Ga0070697_100009780 3300005536 Bacteria 7480
59 Ga0070686_100001425 3300005544 Bacteria 13485
60 Ga0070695_100002409 3300005545 Bacteria 10746
61 Ga0070696_100009906 3300005546 Bacteria 6375
62 Ga0070696_100010285 3300005546 Bacteria 6264
63 Ga0070696_100017892 3300005546 Bacteria 4785
64 Ga0070704_100010736 3300005549 Bacteria 5580
65 Ga0070704_100068832 3300005549 Unclassified 2562
66 Ga0068855_100032788 3300005563 Bacteria 6201
67 Ga0068855_100043061 3300005563 Bacteria 5349
68 Ga0068855_100073658 3300005563 Bacteria 3967
69 Ga0070664_100003488 3300005564 Bacteria 12702
70 Ga0070664_100127486 3300005564 Bacteria 2233
71 Ga0068856_100146833 3300005614 Unclassified 2366
72 Ga0068866_10012324 3300005718 Bacteria 3724
73 Ga0070716_100003107 3300006173 Bacteria 7755
74 Ga0070712_100025308 3300006175 Bacteria 3944
75 Ga0075430_100027165 3300006846 Bacteria 4865
76 Ga0075430_100048002 3300006846 Bacteria 3605
77 Ga0075431_100031665 3300006847 Bacteria 5447
78 Ga0075431_100042090 3300006847 Bacteria 4710
79 Ga0075433_10014339 3300006852 Bacteria 6473
80 Ga0075434_100012746 3300006871 Bacteria 7979
81 Ga0075434_100043378 3300006871 Bacteria 4461
82 Ga0068865_100004925 3300006881 Bacteria 8071
83 Ga0075436_100056343 3300006914 Bacteria 2715
84 Ga0075435_100051191 3300007076 Bacteria 3326
85 Ga0099794_10079324 3300007265 Unclassified 1617
86 Ga0105244_10012999 3300009036 Bacteria 4890
87 Ga0105240_10180031 3300009093 Bacteria 2495
88 Ga0105245_10003097 3300009098 Bacteria 14881
89 Ga0105245_10018569 3300009098 Bacteria 6082
90 Ga0105245_10069947 3300009098 Bacteria 3183
91 Ga0114129_10099089 3300009147 Unclassified 4034
92 Ga0105238_10009967 3300009551 Bacteria 9528
93 Ga0157371_10000151 3300013102 Bacteria 101401
94 Ga0157370_10010523 3300013104 Bacteria 9741
95 Ga0157370_10018067 3300013104 Bacteria 7098
96 Ga0157369_10018855 3300013105 Bacteria 7732
97 Ga0157369_10068083 3300013105 Bacteria 3825
98 Ga0157374_10041473 3300013296 Bacteria 4242
99 Ga0157378_10004108 3300013297 Bacteria 12854
100 Ga0157378_10014343 3300013297 Bacteria 6939
101 Ga0163162_10000011 3300013306 Bacteria 299877
102 Ga0157372_10009885 3300013307 Bacteria 10148
103 Ga0157372_10064562 3300013307 Bacteria 4107
104 Ga0157375_10069222 3300013308 Bacteria 3534
105 Ga0157379_10127946 3300014968 Bacteria 2286
106 Ga0157376_10051419 3300014969 Bacteria 3423
107 Ga0182006_1000310 3300015261 Bacteria 42614
108 Ga0213876_10002171 3300021384 Bacteria 11586
109 Ga0207653_10000204 3300025885 Bacteria 40118
110 Ga0207642_10015660 3300025899 Bacteria 2833
111 Ga0207699_10004312 3300025906 Bacteria 6801
112 Ga0207645_10002636 3300025907 Bacteria 13984
113 Ga0207705_10049918 3300025909 Bacteria 3011
114 Ga0207654_10023017 3300025911 Bacteria 3332
115 Ga0207707_10001365 3300025912 Bacteria 22660
116 Ga0207707_10011491 3300025912 Bacteria 7710
117 Ga0207707_10014742 3300025912 Bacteria 6812
118 Ga0207707_10103622 3300025912 Bacteria 2487
119 Ga0207707_10150783 3300025912 Bacteria 2033
120 Ga0207695_10026627 3300025913 Bacteria 6453
121 Ga0207663_10024038 3300025916 Bacteria 3506
122 Ga0207660_10007736 3300025917 Bacteria 6957
123 Ga0207660_10022788 3300025917 Bacteria 4222
124 Ga0207662_10021079 3300025918 Bacteria 3720
125 Ga0207649_10051257 3300025920 Bacteria 2555
126 Ga0207649_10051730 3300025920 Bacteria 2545
127 Ga0207652_10001046 3300025921 Bacteria 25320
128 Ga0207652_10009200 3300025921 Bacteria 7952
129 Ga0207652_10019831 3300025921 Bacteria 5535
130 Ga0207652_10023027 3300025921 Bacteria 5160
131 Ga0207652_10070942 3300025921 Bacteria 3026
132 Ga0207681_10025312 3300025923 Bacteria 3816
133 Ga0207694_10009493 3300025924 Bacteria 7335
134 Ga0207687_10058182 3300025927 Bacteria 2718
135 Ga0207687_10117582 3300025927 Bacteria 1983
136 Ga0207706_10005487 3300025933 Bacteria 11827
137 Ga0207669_10013304 3300025937 Bacteria 4081
138 Ga0207669_10039515 3300025937 Bacteria 2728
139 Ga0207704_10001235 3300025938 Bacteria 11383
140 Ga0207704_10020723 3300025938 Bacteria 3485
141 Ga0207665_10008076 3300025939 Bacteria 6945
142 Ga0207691_10018764 3300025940 Bacteria 6551
143 Ga0207689_10077420 3300025942 Bacteria 2734
144 Ga0207661_10000940 3300025944 Bacteria 19172
145 Ga0207661_10029166 3300025944 Bacteria 4235
146 Ga0207661_10047928 3300025944 Bacteria 3394
147 Ga0207661_10050934 3300025944 Bacteria 3301
148 Ga0207667_10017605 3300025949 Bacteria 8036
149 Ga0207677_10003420 3300026023 Bacteria 8415
150 Ga0207639_10030647 3300026041 Unclassified 3946
151 Ga0207708_10001402 3300026075 Bacteria 18079
152 Ga0207702_10075364 3300026078 Bacteria 2914
153 Ga0207648_10004961 3300026089 Bacteria 13535
154 Ga0207648_10022410 3300026089 Bacteria 5672
155 Ga0207674_10034210 3300026116 Bacteria 5316
156 Ga0207683_10030138 3300026121 Bacteria 4700
157 Ga0207683_10046054 3300026121 Bacteria 3815
158 Ga0209995_1000934 3300027471 Bacteria 4541
159 Ga0209998_10000938 3300027717 Bacteria 7417
160 Ga0209974_10016202 3300027876 Bacteria 2475
161 Ga0307405_10045043 3300031731 Bacteria 2701
162 Ga0307406_10071150 3300031901 Bacteria 2279
163 Ga0307416_100062896 3300032002 Bacteria 3037
164 Ga0373934_0000860 3300035086 Bacteria 10989
165 Ga0373923_0002344 3300035111 Bacteria 5806
166 Ga0373933_0004694 3300035724 Bacteria 7483
167 Ga0373937_0030819 3300036401 Bacteria 4858
168 Ga0395899_0005153 3300037312 Bacteria 10168
169 Ga0395900_0053350 3300037418 Bacteria 4161
170 Ga0395905_0003492 3300037471 Bacteria 16780
171 Ga0436365_0406697 3300039437 Bacteria 16757
172 Ga0453683_0018617 3300044673 Bacteria 4457
173 Ga0453684_0000617 3300044712 Bacteria 130120
174 Ga0453684_0011514 3300044712 Bacteria 14810
175 Ga0453684_0198211 3300044712 Bacteria 2342
176 Ga0466967_0012613 3300045976 Bacteria 6478
177 Ga0466967_0114267 3300045976 Bacteria 2485
178 Ga0495651_0112396 3300046462 Bacteria 2012
179 Ga0495664_0052180 3300046477 Bacteria 2429
180 Ga0495652_0002090 3300046529 Bacteria 21114
181 Ga0495587_0006425 3300046536 Bacteria 7663
182 Ga0495587_0006887 3300046536 Bacteria 7391
183 Ga0495645_0001595 3300046543 Bacteria 15339
184 Ga0495667_0049939 3300046559 Bacteria 2762
185 Ga0495667_0055131 3300046559 Bacteria 2614
186 Ga0495599_0004890 3300046678 Bacteria 7967
187 Ga0495623_0017642 3300046679 Bacteria 4610
188 Ga0495600_0103606 3300046809 Bacteria 1854
189 Ga0495581_0032639 3300047315 Bacteria 3015
190 Ga0495604_0033012 3300047317 Bacteria 4098
191 Ga0495675_0005807 3300047444 Bacteria 7542
192 Ga0495675_0022723 3300047444 Bacteria 3999
193 Ga0495684_0007975 3300047471 Bacteria 8182
194 Ga0495684_0035421 3300047471 Bacteria 3828
195 Ga0495602_0022505 3300048088 Bacteria 6165
196 Ga0496112_0005444 3300048915 Bacteria 11014
197 Ga0496112_0084311 3300048915 Bacteria 3143
198 Ga0501033_0021317 3300049570 Bacteria 4888
199 Ga0501043_0074592 3300049579 Bacteria 2665
200 Ga0501070_0087254 3300049586 Bacteria 2583
201 Ga0501227_009347 3300049665 Bacteria 2111
202 Ga0501233_000412 3300049668 Bacteria 6717
203 Ga0501235_002176 3300049669 Bacteria 4207
204 Ga0501249_004147 3300049679 Bacteria 2934
205 Ga0501261_004968 3300049690 Bacteria 1661
206 Ga0501221_000378 3300049704 Bacteria 6825
207 Ga0501225_0000515 3300049705 Bacteria 12082
208 Ga0501267_003289 3300049764 Bacteria 1470
209 Ga0501268_000112 3300049765 Bacteria 6774
210 Ga0501270_000419 3300049767 Bacteria 3636
211 Ga0501035_0191197 3300049822 Bacteria 1760
212 nmdc:mga05p37_81864_c1 3300050507 Unclassified 3977
213 nmdc:mga0qj67_17083_c1 3300050509 Bacteria 5514
214 nmdc:mga0qj67_30803_c1 3300050509 Bacteria 4177
215 nmdc:mga0qj67_36343_c1 3300050509 Bacteria 3853
216 nmdc:mga06r32_27098_c1 3300050510 Bacteria 5349
217 nmdc:mga06r32_69160_c1 3300050510 Bacteria 3412
218 nmdc:mga0n895_11437_c1 3300050512 Bacteria 7919
219 nmdc:mga0n895_176276_c1 3300050512 Unclassified 2169
220 nmdc:mga0rr50_53757_c1 3300050513 Bacteria 2997
221 nmdc:mga0rr50_9171_c1 3300050513 Bacteria 6203
222 nmdc:mga08x19_19899_c1 3300050514 Bacteria 4126
223 nmdc:mga0a205_50606_c1 3300050515 Bacteria 4011
224 2819547254 2818991437 Bacteria 5805520
225 Ga0075430_100028059
226 Ga0058863_10168554
227 Ga0058862_10077823
228 Ga0058862_12576472
229 Ga0065714_10064525
230 Ga0065712_10008739
231 Ga0065715_10089266
232 Ga0070658_10006606
233 Ga0070676_10002547
234 Ga0070683_100003244
235 Ga0070683_100012729
236 Ga0070683_100016022
237 Ga0070683_100024396
238 Ga0070683_100045345
239 Ga0070690_100069444
240 Ga0070670_100066047
241 Ga0070680_100019298
242 Ga0070680_100019648
243 Ga0070680_100019816
244 Ga0070682_100001078
245 Ga0068868_100006312
246 Ga0068868_100021930
247 Ga0070660_100050586
248 Ga0070687_100013030
249 Ga0070661_100003070
250 Ga0070674_100064671
251 Ga0070709_10002086
252 Ga0070709_10002230
253 Ga0070714_100040582
254 Ga0070713_100003693
255 Ga0070710_10055853
256 Ga0070705_100015327
257 Ga0070705_100045864
258 Ga0070700_100005203
259 Ga0070708_100001261
260 Ga0070662_100026843
261 Ga0070681_10020423
262 Ga0070681_10020709
263 Ga0070681_10028235
264 Ga0070681_10051505
265 Ga0070681_10081919
266 Ga0070681_10117587
267 Ga0068867_100035462
268 Ga0070707_100026156
269 Ga0070698_100000089
270 Ga0070698_100016161
271 Ga0070698_100025234
272 Ga0070698_100187348
273 Ga0070699_100043866
274 Ga0070699_100049133
275 Ga0070699_100053159
276 Ga0070679_100002135
277 Ga0070679_100002878
278 Ga0070679_100004676
279 Ga0070679_100062783
280 Ga0070684_100010168
281 Ga0070684_100018987
282 Ga0070697_100009780
283 Ga0070686_100001425
284 Ga0070695_100002409
285 Ga0070696_100009906
286 Ga0070696_100010285
287 Ga0070696_100017892
288 Ga0070704_100010736
289 Ga0070704_100068832
290 Ga0068855_100032788
291 Ga0068855_100043061
292 Ga0068855_100073658
293 Ga0070664_100003488
294 Ga0070664_100127486
295 Ga0068856_100146833
296 Ga0068866_10012324
297 Ga0070716_100003107
298 Ga0070712_100025308
299 Ga0075430_100027165
300 Ga0075430_100048002
301 Ga0075431_100031665
302 Ga0075431_100042090
303 Ga0075433_10014339
304 Ga0075434_100012746
305 Ga0075434_100043378
306 Ga0068865_100004925
307 Ga0075436_100056343
308 Ga0075435_100051191
309 Ga0099794_10079324
310 Ga0105244_10012999
311 Ga0105240_10180031
312 Ga0105245_10003097
313 Ga0105245_10018569
314 Ga0105245_10069947
315 Ga0114129_10099089
316 Ga0105238_10009967
317 Ga0157371_10000151
318 Ga0157370_10010523
319 Ga0157370_10018067
320 Ga0157369_10018855
321 Ga0157369_10068083
322 Ga0157374_10041473
323 Ga0157378_10004108
324 Ga0157378_10014343
325 Ga0163162_10000011
326 Ga0157372_10009885
327 Ga0157372_10064562
328 Ga0157375_10069222
329 Ga0157379_10127946
330 Ga0157376_10051419
331 Ga0182006_1000310
332 Ga0213876_10002171
333 Ga0207653_10000204
334 Ga0207642_10015660
335 Ga0207699_10004312
336 Ga0207645_10002636
337 Ga0207705_10049918
338 Ga0207654_10023017
339 Ga0207707_10001365
340 Ga0207707_10011491
341 Ga0207707_10014742
342 Ga0207707_10103622
343 Ga0207707_10150783
344 Ga0207695_10026627
345 Ga0207663_10024038
346 Ga0207660_10007736
347 Ga0207660_10022788
348 Ga0207662_10021079
349 Ga0207649_10051257
350 Ga0207649_10051730
351 Ga0207652_10001046
352 Ga0207652_10009200
353 Ga0207652_10019831
354 Ga0207652_10023027
355 Ga0207652_10070942
356 Ga0207681_10025312
357 Ga0207694_10009493
358 Ga0207687_10058182
359 Ga0207687_10117582
360 Ga0207706_10005487
361 Ga0207669_10013304
362 Ga0207669_10039515
363 Ga0207704_10001235
364 Ga0207704_10020723
365 Ga0207665_10008076
366 Ga0207691_10018764
367 Ga0207689_10077420
368 Ga0207661_10000940
369 Ga0207661_10029166
370 Ga0207661_10047928
371 Ga0207661_10050934
372 Ga0207667_10017605
373 Ga0207677_10003420
374 Ga0207639_10030647
375 Ga0207708_10001402
376 Ga0207702_10075364
377 Ga0207648_10004961
378 Ga0207648_10022410
379 Ga0207674_10034210
380 Ga0207683_10030138
381 Ga0207683_10046054
382 Ga0209995_1000934
383 Ga0209998_10000938
384 Ga0209974_10016202
385 Ga0307405_10045043
386 Ga0307406_10071150
387 Ga0307416_100062896
388 Ga0373934_0000860
389 Ga0373923_0002344
390 Ga0373933_0004694
391 Ga0373937_0030819
392 Ga0395899_0005153
393 Ga0395900_0053350
394 Ga0395905_0003492
395 Ga0436365_0406697
396 Ga0453683_0018617
397 Ga0453684_0000617
398 Ga0453684_0011514
399 Ga0453684_0198211
400 Ga0466967_0012613
401 Ga0466967_0114267
402 Ga0495651_0112396
403 Ga0495664_0052180
404 Ga0495652_0002090
405 Ga0495587_0006425
406 Ga0495587_0006887
407 Ga0495645_0001595
408 Ga0495667_0049939
409 Ga0495667_0055131
410 Ga0495599_0004890
411 Ga0495623_0017642
412 Ga0495600_0103606
413 Ga0495581_0032639
414 Ga0495604_0033012
415 Ga0495675_0005807
416 Ga0495675_0022723
417 Ga0495684_0007975
418 Ga0495684_0035421
419 Ga0495602_0022505
420 Ga0496112_0005444
421 Ga0496112_0084311
422 Ga0501033_0021317
423 Ga0501043_0074592
424 Ga0501070_0087254
425 Ga0501227_009347
426 Ga0501233_000412
427 Ga0501235_002176
428 Ga0501249_004147
429 Ga0501261_004968
430 Ga0501221_000378
431 Ga0501225_0000515
432 Ga0501267_003289
433 Ga0501268_000112
434 Ga0501270_000419
435 Ga0501035_0191197
436 nmdc:mga05p37_81864_c1
437 nmdc:mga0qj67_17083_c1
438 nmdc:mga0qj67_30803_c1
439 nmdc:mga0qj67_36343_c1
440 nmdc:mga06r32_27098_c1
441 nmdc:mga06r32_69160_c1
442 nmdc:mga0n895_11437_c1
443 nmdc:mga0n895_176276_c1
444 nmdc:mga0rr50_53757_c1
445 nmdc:mga0rr50_9171_c1
446 nmdc:mga08x19_19899_c1
447 nmdc:mga0a205_50606_c1
448 2819547254

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12771

SusD-like_2

Starch-binding associating with outer membrane

51

501

0.77

PF12741

SusD-like

Susd and RagB outer membrane lipoprotein

75

494

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
4q69-assembly1.cif.gz_B crystal structure of a susd homolog (bt2259) from bacteroides thetaiotaomicron vpi-5482 at 2.50 a resolution 0.8294 33 524
4q69-assembly1.cif.gz_B crystal structure of a susd homolog (bt2259) from bacteroides thetaiotaomicron vpi-5482 at 2.50 a resolution 0.8208 33 524
3ejn-assembly1.cif.gz_A crystal structure of a susd homolog (bf3025) from bacteroides fragilis nctc 9343 at 1.50 a resolution 0.8084 33 526
3ejn-assembly1.cif.gz_A crystal structure of a susd homolog (bf3025) from bacteroides fragilis nctc 9343 at 1.50 a resolution 0.8035 33 526
5j5u-assembly3.cif.gz_C fjoh_4561 chitin-binding protein 0.784 35 527
ID Description Score Start End Superfamily
af_Q8NEE8_336_416_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9919 356 385 1.25.40.10
af_Q8C1F5_7_99_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9683 356 385 1.25.40.10
af_K7K8D4_782_884_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8821 352 384 1.25.40.10
af_F1QHY2_844_986_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8192 90 236 1.25.40.10
4q69A00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.7944 28 524 1.25.40.390
ID Description Score Start End GO Terms
AF-A0A2V9XD08-F1-model_v4 SusD/RagB family nutrient-binding outer membrane lipoprotein 0.9759 88 527
AF-A0A2V9XD08-F1-model_v4 SusD/RagB family nutrient-binding outer membrane lipoprotein 0.9737 88 527
AF-A0A2V7KQU6-F1-model_v4 SusD/RagB family nutrient-binding outer membrane lipoprotein 0.9727 135 527
AF-A0A4Q5RDS5-F1-model_v4 SusD/RagB family nutrient-binding outer membrane lipoprotein 0.9722 244 527
AF-A0A519VX56-F1-model_v4 SusD/RagB family nutrient-binding outer membrane lipoprotein 0.9694 96 446

Map