F336566
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 224 | 202 | 448 | 306 |
Family's Representative Sequence
| Representative Sequence | 3300006844|Ga0075428_100295762|Ga0075428_1002957622 |
| Length | 329 |
| Sequence | MRVRIATRKSKLALAQTRWVGEQIRALFPHVEIEEVQLVTQGDKILDVPLANVGGKGLFVSEIERALVDGRADLAVHSLKDLPADLASGLDIACVPKREDPRDVLVTRDGGELDDLHAGARVGTSSLRRVCQLRARRNDLAYLPLRGNVDTRLRKLDSNDLDAVVLAHAGLKRLGLVDRPMWIIPPTICIPAVGQGALAIEARKGDERVRELLAPLEDPTTRIEIEAERAFLARLQGGCQVPLAAYARVSDGGARVRLDGMVGSIDGERMLSASSDRYVTDTGLDAHRARAQELGEEVALALLAQGAERVIAEAKLAAAQTGLGGGVLH |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 2 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 3 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 4 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 5 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 6 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 7 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 8 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 11 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 22 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 26 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 27 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 29 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 30 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 31 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 32 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 33 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 34 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 35 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 49 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 51 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 70 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 72 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 73 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 74 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 75 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 76 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 77 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 78 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 79 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 80 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 81 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 82 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 83 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 84 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 85 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 86 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 87 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 88 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 89 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 90 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 91 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 92 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 93 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 94 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 95 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 96 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 97 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 98 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 99 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 110 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 112 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 113 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 114 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 115 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 116 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 117 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 119 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 120 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 121 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 122 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 123 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 124 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 125 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 126 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 127 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 128 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 129 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 130 | 3300049132 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 131 | 3300049529 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 132 | 3300049531 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 133 | 3300049532 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 134 | 3300049549 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 135 | 3300049550 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 136 | 3300049551 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 137 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 139 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 140 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 143 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 144 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 145 | 2511231119 | Bacillus velezensis CAU B946 | Isolate | Rhizosphere |
| 146 | 2540341094 | Bacillus subtilis XF-1 | Isolate | Rhizosphere |
| 147 | 2545555800 | Bacillus amyloliquefaciens EGD-AQ14 | Isolate | Rhizosphere |
| 148 | 2554235283 | Bacillus safensis VK | Isolate | Rhizosphere |
| 149 | 2576861599 | Bacillus amyloliquefaciens EGD-AQ14 | Isolate | Rhizosphere |
| 150 | 2630968484 | Bacillus methylotrophicus KACC 13105 | Isolate | Rhizosphere |
| 151 | 2643221731 | Bacillus sp. Root147 | Isolate | Unclassified |
| 152 | 2643221732 | Bacillus sp. Root239 | Isolate | Unclassified |
| 153 | 2643221735 | Bacillus sp. Root920 | Isolate | Unclassified |
| 154 | 2648501850 | Bacillus amyloliquefaciens RHNK22 | Isolate | Rhizosphere |
| 155 | 2671180844 | Bacillus amyloliquefaciens Bs006 | Isolate | Unclassified |
| 156 | 2684623153 | Bacillus pumilus SH-B9 | Isolate | Unclassified |
| 157 | 2687453109 | Bacillus pumilus SH-B11 | Isolate | Unclassified |
| 158 | 2695420354 | Bacillus sp. Co1-6 | Isolate | Unclassified |
| 159 | 2716884898 | Bacillus methylotrophicus FKM10 | Isolate | Rhizosphere |
| 160 | 2808606399 | Bacillus sp. SJZ110 | Isolate | Rhizosphere |
| 161 | 2811994870 | Bacillus sp. JB4 | Isolate | Unclassified |
| 162 | 2816332295 | Bacillus paralicheniformis MDJK30 | Isolate | Rhizosphere |
| 163 | 2818991465 | Priestia megaterium 3291 | Isolate | Rhizosphere |
| 164 | 2818991468 | Bacillus safensis 3300 | Isolate | Rhizosphere |
| 165 | 2823526263 | Bacillus altitudinis P-10 | Isolate | Unclassified |
| 166 | 2842882022 | Bacillus sp. R-71893 | Isolate | Unclassified |
| 167 | 2857604169 | Domibacillus sp. R-71921 | Isolate | Unclassified |
| 168 | 2857609550 | Domibacillus sp. R-71929 | Isolate | Unclassified |
| 169 | 2860837431 | Bacillus sp. WR11 | Isolate | Unclassified |
| 170 | 2877768649 | Bacillus amyloliquefaciens Y14 | Isolate | Rhizosphere |
| 171 | 2880169592 | Bacillus velezensis T20E-257 | Isolate | Unclassified |
| 172 | 2897109615 | Bacillus amyloliquefaciens YP6 | Isolate | Unclassified |
| 173 | 2904524088 | Priestia megaterium 1428 | Isolate | Rhizosphere |
| 174 | 2904560550 | Bacillus velezensis 1780 | Isolate | Rhizosphere |
| 175 | 2908665501 | Bacillus pumilus 1391 | Isolate | Rhizosphere |
| 176 | 2911138879 | Spirosoma sp. KUDC1026 | Isolate | Rhizosphere |
| 177 | 2919093281 | Bacillus safensis 1383 | Isolate | Rhizosphere |
| 178 | 2919143609 | Priestia megaterium 1751 | Isolate | Rhizosphere |
| 179 | 2919517244 | Priestia aryabhattai 3820 | Isolate | Unclassified |
| 180 | 2919720352 | Priestia megaterium 4340 | Isolate | Unclassified |
| 181 | 2919726948 | Bacillus pumilus 4489 | Isolate | Unclassified |
| 182 | 2928093941 | Priestia aryabhattai 1389 | Isolate | Rhizosphere |
| 183 | 2929004312 | Priestia megaterium 1104 | Isolate | Unclassified |
| 184 | 2954773129 | Bacillus sp. TBS-096 | Isolate | Rhizosphere |
| 185 | 2960319331 | Priestia megaterium AFS057444 | Isolate | Unclassified |
| 186 | 2960375949 | Priestia megaterium AFS067084 | Isolate | Unclassified |
| 187 | 2962290636 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 188 | 2969136845 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 189 | 2969141011 | Bacillus velezensis MH25 | Isolate | Unclassified |
| 190 | 2969765954 | Bacillus intestinalis GM2 | Isolate | Rhizosphere |
| 191 | 2969770375 | Bacillus subtilis GM5 | Isolate | Rhizosphere |
| 192 | 2971893375 | Bacillus sp. HNA3 | Isolate | Rhizosphere |
| 193 | 2980492589 | Bacillus subtilis GQJK2 | Isolate | Rhizosphere |
| 194 | 3006858327 | Bacillus paralicheniformis SUBG0010 | Isolate | Unclassified |
| 195 | 3006879489 | Bacillus atrophaeus UCMB-5137 | Isolate | Rhizosphere |
| 196 | 3006969106 | Bacillus sp. FJAT-50079 | Isolate | Rhizosphere |
| 197 | 8022630665 | Bacillus sp. PW192 | Isolate | Rhizosphere |
| 198 | 8022653035 | Bacillus sp. Rc4 | Isolate | Unclassified |
| 199 | 8022893055 | Bacillus aryabhattai AFS007213 | Isolate | Unclassified |
| 200 | 8022914991 | Bacillus aryabhattai SQU-R12 | Isolate | Unclassified |
| 201 | 8051952484 | Bacillus amyloliquefaciens K2 | Isolate | Rhizosphere |
| 202 | 8052174270 | Bacillus velezensis CH13 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 70.09 |
| Metatranscriptomes | 4.02 |
| Isolates | 25.89 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.02 |
| Nodule | 0 |
| Rhizoplane | 5.8 |
| Rhizosphere | 70.98 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 3.12 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0075428_100295762 | 3300006844 | Bacteria | 1741 |
| 2 | JGI25151J46595_10000060 | 3300003187 | Bacteria | 146867 |
| 3 | rootH1_10001425 | 3300003316 | Bacteria | 61502 |
| 4 | rootH2_10122751 | 3300003320 | Bacteria | 3510 |
| 5 | rootL2_10028662 | 3300003322 | Bacteria | 33682 |
| 6 | Ga0006562J51391_1002336 | 3300003578 | Bacteria | 14410 |
| 7 | Ga0006562J51391_1003162 | 3300003578 | Bacteria | 6307 |
| 8 | Ga0055528_1002774 | 3300003790 | Bacteria | 9179 |
| 9 | Ga0070676_10102932 | 3300005328 | Bacteria | 1767 |
| 10 | Ga0070683_100421353 | 3300005329 | Bacteria | 1274 |
| 11 | Ga0070680_100033350 | 3300005336 | Bacteria | 4149 |
| 12 | Ga0070680_100206773 | 3300005336 | Bacteria | 1656 |
| 13 | Ga0070675_100354523 | 3300005354 | Bacteria | 1301 |
| 14 | Ga0070671_100037598 | 3300005355 | Bacteria | 4014 |
| 15 | Ga0070671_100470011 | 3300005355 | Bacteria | 1080 |
| 16 | Ga0070710_10223976 | 3300005437 | Bacteria | 1198 |
| 17 | Ga0070708_100014990 | 3300005445 | Bacteria | 6391 |
| 18 | Ga0070662_100256655 | 3300005457 | Bacteria | 1407 |
| 19 | Ga0070681_10040990 | 3300005458 | Bacteria | 4640 |
| 20 | Ga0070706_100000014 | 3300005467 | Bacteria | 191079 |
| 21 | Ga0070707_100016330 | 3300005468 | Bacteria | 6968 |
| 22 | Ga0070698_100159921 | 3300005471 | Bacteria | 2197 |
| 23 | Ga0070699_100051502 | 3300005518 | Bacteria | 3564 |
| 24 | Ga0070679_100003874 | 3300005530 | Bacteria | 13745 |
| 25 | Ga0070679_100329132 | 3300005530 | Bacteria | 1476 |
| 26 | Ga0070684_100016552 | 3300005535 | Bacteria | 6029 |
| 27 | Ga0070684_100315361 | 3300005535 | Bacteria | 1436 |
| 28 | Ga0070697_100002574 | 3300005536 | Bacteria | 13953 |
| 29 | Ga0070664_100097466 | 3300005564 | Bacteria | 2553 |
| 30 | Ga0068857_100313869 | 3300005577 | Bacteria | 1447 |
| 31 | Ga0068856_100386766 | 3300005614 | Bacteria | 1418 |
| 32 | Ga0070702_100025910 | 3300005615 | Bacteria | 3147 |
| 33 | Ga0068860_100090186 | 3300005843 | Bacteria | 2919 |
| 34 | Ga0081538_10029093 | 3300005981 | Bacteria | 3783 |
| 35 | Ga0075428_100154720 | 3300006844 | Bacteria | 2491 |
| 36 | Ga0075430_100079214 | 3300006846 | Bacteria | 2754 |
| 37 | Ga0075434_100144884 | 3300006871 | Bacteria | 2395 |
| 38 | Ga0075429_100214531 | 3300006880 | Bacteria | 1686 |
| 39 | Ga0075435_100021027 | 3300007076 | Bacteria | 5012 |
| 40 | Ga0099794_10000023 | 3300007265 | Bacteria | 65487 |
| 41 | Ga0111539_10010997 | 3300009094 | Bacteria | 11393 |
| 42 | Ga0111539_11257037 | 3300009094 | Bacteria | 859 |
| 43 | Ga0105245_10416133 | 3300009098 | Bacteria | 1346 |
| 44 | Ga0105247_10005255 | 3300009101 | Bacteria | 8168 |
| 45 | Ga0105243_10000855 | 3300009148 | Bacteria | 28932 |
| 46 | Ga0105242_10030894 | 3300009176 | Bacteria | 4278 |
| 47 | Ga0105237_10538346 | 3300009545 | Bacteria | 1174 |
| 48 | Ga0105249_10334027 | 3300009553 | Bacteria | 1530 |
| 49 | Ga0157374_10094414 | 3300013296 | Bacteria | 2858 |
| 50 | Ga0157374_10245573 | 3300013296 | Bacteria | 1761 |
| 51 | Ga0157378_10004637 | 3300013297 | Bacteria | 12050 |
| 52 | Ga0157372_10302232 | 3300013307 | Bacteria | 1861 |
| 53 | Ga0157375_10677380 | 3300013308 | Bacteria | 1186 |
| 54 | Ga0157377_10000630 | 3300014745 | Bacteria | 14652 |
| 55 | Ga0157376_10221195 | 3300014969 | Bacteria | 1753 |
| 56 | Ga0213876_10041753 | 3300021384 | Bacteria | 2423 |
| 57 | Ga0209147_101958 | 3300025229 | Bacteria | 6078 |
| 58 | Ga0209147_104078 | 3300025229 | Bacteria | 2550 |
| 59 | Ga0209673_1001923 | 3300025273 | Bacteria | 16488 |
| 60 | Ga0209025_1000001 | 3300025294 | Bacteria | 1888151 |
| 61 | Ga0209025_1000219 | 3300025294 | Bacteria | 137235 |
| 62 | Ga0209025_1010162 | 3300025294 | Bacteria | 6420 |
| 63 | Ga0207426_1012197 | 3300025302 | Bacteria | 3239 |
| 64 | Ga0207696_1002044 | 3300025711 | Bacteria | 10188 |
| 65 | Ga0207655_1002687 | 3300025728 | Bacteria | 13966 |
| 66 | Ga0207713_1001500 | 3300025735 | Bacteria | 18439 |
| 67 | Ga0207710_10047841 | 3300025900 | Bacteria | 1913 |
| 68 | Ga0207645_10114976 | 3300025907 | Bacteria | 1744 |
| 69 | Ga0207684_10000067 | 3300025910 | Bacteria | 191345 |
| 70 | Ga0207649_10193299 | 3300025920 | Bacteria | 1433 |
| 71 | Ga0207646_10017293 | 3300025922 | Bacteria | 6751 |
| 72 | Ga0207659_10184389 | 3300025926 | Bacteria | 1656 |
| 73 | Ga0207687_10344589 | 3300025927 | Bacteria | 1212 |
| 74 | Ga0207709_10008603 | 3300025935 | Bacteria | 5636 |
| 75 | Ga0207670_10038338 | 3300025936 | Bacteria | 3129 |
| 76 | Ga0207679_10066482 | 3300025945 | Bacteria | 2701 |
| 77 | Ga0207702_10038097 | 3300026078 | Bacteria | 4027 |
| 78 | Ga0207674_10664046 | 3300026116 | Bacteria | 1007 |
| 79 | Ga0209588_1000007 | 3300027671 | Bacteria | 183924 |
| 80 | Ga0207428_10005909 | 3300027907 | Bacteria | 11336 |
| 81 | Ga0268264_10077002 | 3300028381 | Bacteria | 2839 |
| 82 | Ga0265336_10066171 | 3300028666 | Bacteria | 1081 |
| 83 | Ga0265338_10001146 | 3300028800 | Bacteria | 43787 |
| 84 | Ga0265338_10026690 | 3300028800 | Bacteria | 5815 |
| 85 | Ga0265338_10031356 | 3300028800 | Bacteria | 5213 |
| 86 | Ga0265330_10019849 | 3300031235 | Bacteria | 3073 |
| 87 | Ga0265332_10000162 | 3300031238 | Bacteria | 54127 |
| 88 | Ga0265332_10041824 | 3300031238 | Bacteria | 1982 |
| 89 | Ga0265328_10009938 | 3300031239 | Bacteria | 3848 |
| 90 | Ga0265328_10054333 | 3300031239 | Bacteria | 1469 |
| 91 | Ga0265320_10009366 | 3300031240 | Bacteria | 5913 |
| 92 | Ga0265320_10042011 | 3300031240 | Bacteria | 2271 |
| 93 | Ga0265340_10074673 | 3300031247 | Bacteria | 1603 |
| 94 | Ga0265339_10123220 | 3300031249 | Bacteria | 1330 |
| 95 | Ga0265331_10000034 | 3300031250 | Bacteria | 200155 |
| 96 | Ga0265316_10001087 | 3300031344 | Bacteria | 29442 |
| 97 | Ga0265316_10118911 | 3300031344 | Bacteria | 1997 |
| 98 | Ga0307408_100334651 | 3300031548 | Bacteria | 1280 |
| 99 | Ga0307408_100519572 | 3300031548 | Bacteria | 1045 |
| 100 | Ga0316579_10006938 | 3300031691 | Bacteria | 4650 |
| 101 | Ga0265314_10000639 | 3300031711 | Bacteria | 43005 |
| 102 | Ga0265314_10005623 | 3300031711 | Bacteria | 11259 |
| 103 | Ga0265342_10000342 | 3300031712 | Bacteria | 52184 |
| 104 | Ga0265342_10011142 | 3300031712 | Bacteria | 6170 |
| 105 | Ga0265342_10050494 | 3300031712 | Bacteria | 2484 |
| 106 | Ga0307409_100131358 | 3300031995 | Bacteria | 2141 |
| 107 | Ga0307416_100013393 | 3300032002 | Bacteria | 5572 |
| 108 | Ga0307415_100106466 | 3300032126 | Unclassified | 2070 |
| 109 | Ga0316580_10013796 | 3300032139 | Bacteria | 2463 |
| 110 | Ga0373943_0088148 | 3300035170 | Bacteria | 1603 |
| 111 | Ga0316574_0008021 | 3300035398 | Bacteria | 5834 |
| 112 | Ga0373933_0006365 | 3300035724 | Bacteria | 6425 |
| 113 | Ga0373933_0069289 | 3300035724 | Bacteria | 2144 |
| 114 | Ga0316584_0019073 | 3300036712 | Bacteria | 4954 |
| 115 | Ga0400489_18295 | 3300039093 | Bacteria | 4436 |
| 116 | Ga0436365_0728883 | 3300039437 | Bacteria | 6384 |
| 117 | Ga0436363_0971564 | 3300039450 | Bacteria | 2789 |
| 118 | Ga0466961_0156251 | 3300044693 | Bacteria | 1423 |
| 119 | Ga0466963_0346634 | 3300044694 | Bacteria | 1046 |
| 120 | Ga0466959_0157193 | 3300045049 | Bacteria | 1600 |
| 121 | Ga0495603_0008317 | 3300046455 | Bacteria | 6272 |
| 122 | Ga0495651_0028793 | 3300046462 | Bacteria | 4330 |
| 123 | Ga0495639_0036339 | 3300046475 | Unclassified | 2206 |
| 124 | Ga0495584_0026453 | 3300046491 | Bacteria | 2939 |
| 125 | Ga0495630_0343423 | 3300046517 | Unclassified | 1142 |
| 126 | Ga0495586_0030171 | 3300046535 | Unclassified | 2902 |
| 127 | Ga0495633_0014075 | 3300046558 | Bacteria | 4195 |
| 128 | Ga0495658_0072426 | 3300046683 | Unclassified | 2004 |
| 129 | Ga0495604_0265916 | 3300047317 | Bacteria | 1164 |
| 130 | Ga0495685_015828 | 3300047447 | Bacteria | 2576 |
| 131 | Ga0496100_0191878 | 3300048903 | Bacteria | 1483 |
| 132 | Ga0496101_0008083 | 3300048904 | Bacteria | 6860 |
| 133 | Ga0496102_0092512 | 3300048905 | Bacteria | 2800 |
| 134 | Ga0496103_0053729 | 3300048906 | Bacteria | 2496 |
| 135 | Ga0496104_0033862 | 3300048907 | Bacteria | 4761 |
| 136 | Ga0496105_0000579 | 3300048908 | Bacteria | 24293 |
| 137 | Ga0496106_0093515 | 3300048909 | Bacteria | 2323 |
| 138 | Ga0496107_0002433 | 3300048910 | Bacteria | 12063 |
| 139 | Ga0496108_0000370 | 3300048911 | Bacteria | 37629 |
| 140 | Ga0496109_0232468 | 3300048912 | Bacteria | 1734 |
| 141 | Ga0496110_0035515 | 3300048913 | Bacteria | 4324 |
| 142 | Ga0496111_0092687 | 3300048914 | Bacteria | 2214 |
| 143 | Ga0496112_0093313 | 3300048915 | Bacteria | 2980 |
| 144 | Ga0496116_0021970 | 3300048919 | Bacteria | 4797 |
| 145 | Ga0496119_0009055 | 3300048922 | Bacteria | 8626 |
| 146 | Ga0496120_0102861 | 3300048923 | Bacteria | 1506 |
| 147 | Ga0496121_0172226 | 3300048924 | Bacteria | 1571 |
| 148 | Ga0496122_0066038 | 3300048925 | Bacteria | 2617 |
| 149 | Ga0496124_0038812 | 3300048927 | Bacteria | 4132 |
| 150 | Ga0496125_0007900 | 3300048928 | Bacteria | 11236 |
| 151 | Ga0496126_0008439 | 3300048929 | Bacteria | 11112 |
| 152 | Ga0501343_000055 | 3300049132 | Bacteria | 4640 |
| 153 | Ga0501313_000121 | 3300049529 | Bacteria | 4006 |
| 154 | Ga0501315_000145 | 3300049531 | Bacteria | 3997 |
| 155 | Ga0501316_000152 | 3300049532 | Bacteria | 3778 |
| 156 | Ga0501333_000106 | 3300049549 | Bacteria | 2788 |
| 157 | Ga0501334_00090 | 3300049550 | Bacteria | 2917 |
| 158 | Ga0501335_000091 | 3300049551 | Bacteria | 4069 |
| 159 | Ga0501040_0336606 | 3300049576 | Bacteria | 1080 |
| 160 | Ga0501072_0176016 | 3300049588 | Unclassified | 1707 |
| 161 | Ga0501081_0305610 | 3300049743 | Bacteria | 1167 |
| 162 | nmdc:mga0n895_38343_c1 | 3300050512 | Bacteria | 4642 |
| 163 | nmdc:mga0rr50_8944_c1 | 3300050513 | Bacteria | 6260 |
| 164 | nmdc:mga0a205_743494_c1 | 3300050515 | Bacteria | 830 |
| 165 | Ga0501082_0145821 | 3300060353 | Unclassified | 2055 |
| 166 | Ga0530510_0059538 | 3300061734 | Bacteria | 2763 |
| 167 | 2511700486 | 2511231119 | Bacteria | 4019861 |
| 168 | 2540607698 | 2540341094 | Bacteria | 4061186 |
| 169 | 2545557185 | 2545555800 | Bacteria | 4222588 |
| 170 | 2555467906 | 2554235283 | Bacteria | 3683090 |
| 171 | 2578931444 | 2576861599 | Bacteria | 4217202 |
| 172 | 2631982933 | 2630968484 | Bacteria | 3876276 |
| 173 | 2644715633 | 2643221731 | Bacteria | 5623886 |
| 174 | 2644726937 | 2643221732 | Bacteria | 5756404 |
| 175 | 2644741348 | 2643221735 | Bacteria | 3676263 |
| 176 | 2651532791 | 2648501850 | Bacteria | 3975476 |
| 177 | 2674418693 | 2671180844 | Bacteria | 4164150 |
| 178 | 2686997718 | 2684623153 | Bacteria | 3878815 |
| 179 | 2687499109 | 2687453109 | Bacteria | 3860091 |
| 180 | 2695628479 | 2695420354 | Bacteria | 3922431 |
| 181 | 2717915825 | 2716884898 | Bacteria | 3928789 |
| 182 | 2809056075 | 2808606399 | Bacteria | 4021018 |
| 183 | 2812316920 | 2811994870 | Bacteria | 3776934 |
| 184 | 2817481071 | 2816332295 | Bacteria | 4352468 |
| 185 | 2819709101 | 2818991465 | Bacteria | 5388835 |
| 186 | 2819723984 | 2818991468 | Bacteria | 3723169 |
| 187 | 2823528927 | 2823526263 | Bacteria | 3765752 |
| 188 | 2842884655 | 2842882022 | Bacteria | 6158489 |
| 189 | 2857606206 | 2857604169 | Bacteria | 5111450 |
| 190 | 2857610622 | 2857609550 | Bacteria | 3753890 |
| 191 | 2860840472 | 2860837431 | Bacteria | 4202080 |
| 192 | 2877771377 | 2877768649 | Bacteria | 3957164 |
| 193 | 2880172244 | 2880169592 | Bacteria | 3900066 |
| 194 | 2897112519 | 2897109615 | Bacteria | 4009619 |
| 195 | 2904524315 | 2904524088 | Bacteria | 5887454 |
| 196 | 2904564440 | 2904560550 | Bacteria | 4029838 |
| 197 | 2908667868 | 2908665501 | Bacteria | 3678115 |
| 198 | 2911143783 | 2911138879 | Bacteria | 5811561 |
| 199 | 2919095657 | 2919093281 | Bacteria | 3660974 |
| 200 | 2919147108 | 2919143609 | Bacteria | 6219228 |
| 201 | 2919519012 | 2919517244 | Bacteria | 5858162 |
| 202 | 2919723380 | 2919720352 | Bacteria | 5986006 |
| 203 | 2919728624 | 2919726948 | Bacteria | 3696050 |
| 204 | 2928096094 | 2928093941 | Bacteria | 5965005 |
| 205 | 2929006535 | 2929004312 | Bacteria | 5678476 |
| 206 | 2954773545 | 2954773129 | Bacteria | 3741715 |
| 207 | 2960319712 | 2960319331 | Bacteria | 5502575 |
| 208 | 2960381076 | 2960375949 | Bacteria | 5361395 |
| 209 | 2962293674 | 2962290636 | Bacteria | 4072939 |
| 210 | 2969139677 | 2969136845 | Bacteria | 3923176 |
| 211 | 2969143829 | 2969141011 | Bacteria | 4118468 |
| 212 | 2969767718 | 2969765954 | Bacteria | 4216713 |
| 213 | 2969772919 | 2969770375 | Bacteria | 4271280 |
| 214 | 2971896046 | 2971893375 | Bacteria | 3929648 |
| 215 | 2980495464 | 2980492589 | Bacteria | 4072961 |
| 216 | 3006861481 | 3006858327 | Bacteria | 4317835 |
| 217 | 3006882357 | 3006879489 | Bacteria | 4064221 |
| 218 | 3006972058 | 3006969106 | Bacteria | 4739423 |
| 219 | 8022632118 | 8022630665 | Bacteria | 3886130 |
| 220 | 8022654640 | 8022653035 | Bacteria | 4035078 |
| 221 | 8022898335 | 8022893055 | Bacteria | 5300455 |
| 222 | 8022917509 | 8022914991 | Bacteria | 5584517 |
| 223 | 8051955053 | 8051952484 | Bacteria | 3926774 |
| 224 | 8052176304 | 8052174270 | Bacteria | 3881265 |
| 225 | Ga0075428_100295762 | |||
| 226 | JGI25151J46595_10000060 | |||
| 227 | rootH1_10001425 | |||
| 228 | rootH2_10122751 | |||
| 229 | rootL2_10028662 | |||
| 230 | Ga0006562J51391_1002336 | |||
| 231 | Ga0006562J51391_1003162 | |||
| 232 | Ga0055528_1002774 | |||
| 233 | Ga0070676_10102932 | |||
| 234 | Ga0070683_100421353 | |||
| 235 | Ga0070680_100033350 | |||
| 236 | Ga0070680_100206773 | |||
| 237 | Ga0070675_100354523 | |||
| 238 | Ga0070671_100037598 | |||
| 239 | Ga0070671_100470011 | |||
| 240 | Ga0070710_10223976 | |||
| 241 | Ga0070708_100014990 | |||
| 242 | Ga0070662_100256655 | |||
| 243 | Ga0070681_10040990 | |||
| 244 | Ga0070706_100000014 | |||
| 245 | Ga0070707_100016330 | |||
| 246 | Ga0070698_100159921 | |||
| 247 | Ga0070699_100051502 | |||
| 248 | Ga0070679_100003874 | |||
| 249 | Ga0070679_100329132 | |||
| 250 | Ga0070684_100016552 | |||
| 251 | Ga0070684_100315361 | |||
| 252 | Ga0070697_100002574 | |||
| 253 | Ga0070664_100097466 | |||
| 254 | Ga0068857_100313869 | |||
| 255 | Ga0068856_100386766 | |||
| 256 | Ga0070702_100025910 | |||
| 257 | Ga0068860_100090186 | |||
| 258 | Ga0081538_10029093 | |||
| 259 | Ga0075428_100154720 | |||
| 260 | Ga0075430_100079214 | |||
| 261 | Ga0075434_100144884 | |||
| 262 | Ga0075429_100214531 | |||
| 263 | Ga0075435_100021027 | |||
| 264 | Ga0099794_10000023 | |||
| 265 | Ga0111539_10010997 | |||
| 266 | Ga0111539_11257037 | |||
| 267 | Ga0105245_10416133 | |||
| 268 | Ga0105247_10005255 | |||
| 269 | Ga0105243_10000855 | |||
| 270 | Ga0105242_10030894 | |||
| 271 | Ga0105237_10538346 | |||
| 272 | Ga0105249_10334027 | |||
| 273 | Ga0157374_10094414 | |||
| 274 | Ga0157374_10245573 | |||
| 275 | Ga0157378_10004637 | |||
| 276 | Ga0157372_10302232 | |||
| 277 | Ga0157375_10677380 | |||
| 278 | Ga0157377_10000630 | |||
| 279 | Ga0157376_10221195 | |||
| 280 | Ga0213876_10041753 | |||
| 281 | Ga0209147_101958 | |||
| 282 | Ga0209147_104078 | |||
| 283 | Ga0209673_1001923 | |||
| 284 | Ga0209025_1000001 | |||
| 285 | Ga0209025_1000219 | |||
| 286 | Ga0209025_1010162 | |||
| 287 | Ga0207426_1012197 | |||
| 288 | Ga0207696_1002044 | |||
| 289 | Ga0207655_1002687 | |||
| 290 | Ga0207713_1001500 | |||
| 291 | Ga0207710_10047841 | |||
| 292 | Ga0207645_10114976 | |||
| 293 | Ga0207684_10000067 | |||
| 294 | Ga0207649_10193299 | |||
| 295 | Ga0207646_10017293 | |||
| 296 | Ga0207659_10184389 | |||
| 297 | Ga0207687_10344589 | |||
| 298 | Ga0207709_10008603 | |||
| 299 | Ga0207670_10038338 | |||
| 300 | Ga0207679_10066482 | |||
| 301 | Ga0207702_10038097 | |||
| 302 | Ga0207674_10664046 | |||
| 303 | Ga0209588_1000007 | |||
| 304 | Ga0207428_10005909 | |||
| 305 | Ga0268264_10077002 | |||
| 306 | Ga0265336_10066171 | |||
| 307 | Ga0265338_10001146 | |||
| 308 | Ga0265338_10026690 | |||
| 309 | Ga0265338_10031356 | |||
| 310 | Ga0265330_10019849 | |||
| 311 | Ga0265332_10000162 | |||
| 312 | Ga0265332_10041824 | |||
| 313 | Ga0265328_10009938 | |||
| 314 | Ga0265328_10054333 | |||
| 315 | Ga0265320_10009366 | |||
| 316 | Ga0265320_10042011 | |||
| 317 | Ga0265340_10074673 | |||
| 318 | Ga0265339_10123220 | |||
| 319 | Ga0265331_10000034 | |||
| 320 | Ga0265316_10001087 | |||
| 321 | Ga0265316_10118911 | |||
| 322 | Ga0307408_100334651 | |||
| 323 | Ga0307408_100519572 | |||
| 324 | Ga0316579_10006938 | |||
| 325 | Ga0265314_10000639 | |||
| 326 | Ga0265314_10005623 | |||
| 327 | Ga0265342_10000342 | |||
| 328 | Ga0265342_10011142 | |||
| 329 | Ga0265342_10050494 | |||
| 330 | Ga0307409_100131358 | |||
| 331 | Ga0307416_100013393 | |||
| 332 | Ga0307415_100106466 | |||
| 333 | Ga0316580_10013796 | |||
| 334 | Ga0373943_0088148 | |||
| 335 | Ga0316574_0008021 | |||
| 336 | Ga0373933_0006365 | |||
| 337 | Ga0373933_0069289 | |||
| 338 | Ga0316584_0019073 | |||
| 339 | Ga0400489_18295 | |||
| 340 | Ga0436365_0728883 | |||
| 341 | Ga0436363_0971564 | |||
| 342 | Ga0466961_0156251 | |||
| 343 | Ga0466963_0346634 | |||
| 344 | Ga0466959_0157193 | |||
| 345 | Ga0495603_0008317 | |||
| 346 | Ga0495651_0028793 | |||
| 347 | Ga0495639_0036339 | |||
| 348 | Ga0495584_0026453 | |||
| 349 | Ga0495630_0343423 | |||
| 350 | Ga0495586_0030171 | |||
| 351 | Ga0495633_0014075 | |||
| 352 | Ga0495658_0072426 | |||
| 353 | Ga0495604_0265916 | |||
| 354 | Ga0495685_015828 | |||
| 355 | Ga0496100_0191878 | |||
| 356 | Ga0496101_0008083 | |||
| 357 | Ga0496102_0092512 | |||
| 358 | Ga0496103_0053729 | |||
| 359 | Ga0496104_0033862 | |||
| 360 | Ga0496105_0000579 | |||
| 361 | Ga0496106_0093515 | |||
| 362 | Ga0496107_0002433 | |||
| 363 | Ga0496108_0000370 | |||
| 364 | Ga0496109_0232468 | |||
| 365 | Ga0496110_0035515 | |||
| 366 | Ga0496111_0092687 | |||
| 367 | Ga0496112_0093313 | |||
| 368 | Ga0496116_0021970 | |||
| 369 | Ga0496119_0009055 | |||
| 370 | Ga0496120_0102861 | |||
| 371 | Ga0496121_0172226 | |||
| 372 | Ga0496122_0066038 | |||
| 373 | Ga0496124_0038812 | |||
| 374 | Ga0496125_0007900 | |||
| 375 | Ga0496126_0008439 | |||
| 376 | Ga0501343_000055 | |||
| 377 | Ga0501313_000121 | |||
| 378 | Ga0501315_000145 | |||
| 379 | Ga0501316_000152 | |||
| 380 | Ga0501333_000106 | |||
| 381 | Ga0501334_00090 | |||
| 382 | Ga0501335_000091 | |||
| 383 | Ga0501040_0336606 | |||
| 384 | Ga0501072_0176016 | |||
| 385 | Ga0501081_0305610 | |||
| 386 | nmdc:mga0n895_38343_c1 | |||
| 387 | nmdc:mga0rr50_8944_c1 | |||
| 388 | nmdc:mga0a205_743494_c1 | |||
| 389 | Ga0501082_0145821 | |||
| 390 | Ga0530510_0059538 | |||
| 391 | 2511700486 | |||
| 392 | 2540607698 | |||
| 393 | 2545557185 | |||
| 394 | 2555467906 | |||
| 395 | 2578931444 | |||
| 396 | 2631982933 | |||
| 397 | 2644715633 | |||
| 398 | 2644726937 | |||
| 399 | 2644741348 | |||
| 400 | 2651532791 | |||
| 401 | 2674418693 | |||
| 402 | 2686997718 | |||
| 403 | 2687499109 | |||
| 404 | 2695628479 | |||
| 405 | 2717915825 | |||
| 406 | 2809056075 | |||
| 407 | 2812316920 | |||
| 408 | 2817481071 | |||
| 409 | 2819709101 | |||
| 410 | 2819723984 | |||
| 411 | 2823528927 | |||
| 412 | 2842884655 | |||
| 413 | 2857606206 | |||
| 414 | 2857610622 | |||
| 415 | 2860840472 | |||
| 416 | 2877771377 | |||
| 417 | 2880172244 | |||
| 418 | 2897112519 | |||
| 419 | 2904524315 | |||
| 420 | 2904564440 | |||
| 421 | 2908667868 | |||
| 422 | 2911143783 | |||
| 423 | 2919095657 | |||
| 424 | 2919147108 | |||
| 425 | 2919519012 | |||
| 426 | 2919723380 | |||
| 427 | 2919728624 | |||
| 428 | 2928096094 | |||
| 429 | 2929006535 | |||
| 430 | 2954773545 | |||
| 431 | 2960319712 | |||
| 432 | 2960381076 | |||
| 433 | 2962293674 | |||
| 434 | 2969139677 | |||
| 435 | 2969143829 | |||
| 436 | 2969767718 | |||
| 437 | 2969772919 | |||
| 438 | 2971896046 | |||
| 439 | 2980495464 | |||
| 440 | 3006861481 | |||
| 441 | 3006882357 | |||
| 442 | 3006972058 | |||
| 443 | 8022632118 | |||
| 444 | 8022654640 | |||
| 445 | 8022898335 | |||
| 446 | 8022917509 | |||
| 447 | 8051955053 | |||
| 448 | 8052176304 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4mlq-assembly1.cif.gz_A | crystal structure of bacillus megaterium porphobilinogen deaminase | 0.9916 | 1 | 297 |
| 5ov5-assembly1.cif.gz_A | bacillus megaterium porphobilinogen deaminase d82e mutant | 0.9797 | 1 | 297 |
| 5ov6-assembly1.cif.gz_A | bacillus megaterium porphobilinogen deaminase d82n mutant | 0.9774 | 1 | 297 |
| 5ov4-assembly1.cif.gz_A | bacillus megaterium porphobilinogen deaminase d82a mutant | 0.9753 | 1 | 297 |
| 5h6o-assembly1.cif.gz_A | porphobilinogen deaminase from vibrio cholerae | 0.9733 | 3 | 297 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_O34090_221_303_3.30.160.40 | Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Porphobilinogen deaminase, C-terminal domain | 0.9969 | 221 | 297 | 3.30.160.40 |
| 5ov6A03 | Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Porphobilinogen deaminase, C-terminal domain | 0.9773 | 220 | 297 | 3.30.160.40 |
| 1ah5A02 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.9658 | 98 | 198 | 3.40.190.10 |
| af_Q9LK73_1_246_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.9594 | 2 | 36 | 3.40.50.2000 |
| 1ah5A02 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.9565 | 98 | 198 | 3.40.190.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-Q5KWK6-F1-model_v4 | Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) | 0.9964 | 1 | 297 |
GO:0004418
GO:0005737 GO:0006782 |
| AF-A0A0B0HHN6-F1-model_v4 | deleted | 0.9953 | 92 | 297 |
|
| AF-A0A385NU27-F1-model_v4 | Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) | 0.9951 | 1 | 297 |
GO:0004418
GO:0005737 GO:0006782 |
| AF-A0A3A0UXZ7-F1-model_v4 | Hydroxymethylbilane synthase (EC 2.5.1.61) | 0.993 | 73 | 297 |
GO:0004418
GO:0005737 GO:0006783 |
| AF-B9DNE1-F1-model_v4 | Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) | 0.9917 | 1 | 297 |
GO:0004418
GO:0005737 GO:0006782 |