F336431

General Info

Members Datasets Scaffolds Average Seq Length
224 151 448 82

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100472837|Ga0070708_1004728372
Length 94
Sequence MTERHMRHAATEMTCQELVELITEYLDGTLPESERSRFDAHVRTCSGCEAYIEQMRMTIRLLGKLSEESISAEARRDLLATFRTWKANGAEQGQ

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
56 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
57 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
88 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
89 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
93 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
94 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
95 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
96 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
97 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
98 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
99 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
100 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
101 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
102 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
103 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
106 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
107 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
108 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
111 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
112 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
113 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
114 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
115 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
116 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
117 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
118 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
143 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
144 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
147 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
148 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
149 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.55
Metatranscriptomes 0.45
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 20.09
Rhizosphere 79.46
Stem 0
Stem Tuber 0
Unclassified 28.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100472837 3300005445 Bacteria 1182
2 rootL2_10175335 3300003322 Bacteria 1203
3 Ga0070658_10663352 3300005327 Bacteria 905
4 Ga0070683_100003798 3300005329 Bacteria 12335
5 Ga0070683_100008887 3300005329 Bacteria 8558
6 Ga0070683_100491754 3300005329 Unclassified 1172
7 Ga0070683_100503011 3300005329 Bacteria 1158
8 Ga0070680_100695471 3300005336 Bacteria 875
9 Ga0070680_101342004 3300005336 Unclassified 619
10 Ga0070682_101163437 3300005337 Bacteria 649
11 Ga0070682_101215340 3300005337 Unclassified 637
12 Ga0068868_101170793 3300005338 Bacteria 710
13 Ga0070660_100817424 3300005339 Unclassified 784
14 Ga0070691_10006247 3300005341 Bacteria 5441
15 Ga0070691_10361597 3300005341 Bacteria 809
16 Ga0070661_100191398 3300005344 Bacteria 1560
17 Ga0070671_101593526 3300005355 Bacteria 579
18 Ga0070703_10004022 3300005406 Unclassified 4156
19 Ga0070714_100034895 3300005435 Bacteria 4213
20 Ga0070714_100836415 3300005435 Bacteria 892
21 Ga0070713_100001482 3300005436 Bacteria 14963
22 Ga0070713_100263449 3300005436 Unclassified 1576
23 Ga0070713_100412428 3300005436 Bacteria 1263
24 Ga0070713_100982043 3300005436 Bacteria 814
25 Ga0070710_10339557 3300005437 Bacteria 991
26 Ga0070711_100337539 3300005439 Bacteria 1208
27 Ga0070711_100858120 3300005439 Bacteria 773
28 Ga0070708_100165729 3300005445 Bacteria 2061
29 Ga0070708_100513375 3300005445 Bacteria 1130
30 Ga0070663_101614229 3300005455 Unclassified 578
31 Ga0070678_100350071 3300005456 Bacteria 1270
32 Ga0070681_10062706 3300005458 Bacteria 3691
33 Ga0070681_11780873 3300005458 Unclassified 543
34 Ga0070706_100565344 3300005467 Bacteria 1057
35 Ga0070706_101476813 3300005467 Unclassified 621
36 Ga0070707_100029405 3300005468 Bacteria 5231
37 Ga0070707_100707326 3300005468 Bacteria 970
38 Ga0070698_100704967 3300005471 Unclassified 951
39 Ga0070698_100909620 3300005471 Bacteria 826
40 Ga0070698_101742071 3300005471 Unclassified 576
41 Ga0070699_100793699 3300005518 Unclassified 866
42 Ga0070679_100679435 3300005530 Bacteria 972
43 Ga0070684_100001199 3300005535 Bacteria 18632
44 Ga0070684_100117034 3300005535 Bacteria 2394
45 Ga0070684_100890521 3300005535 Bacteria 834
46 Ga0070684_101872114 3300005535 Unclassified 566
47 Ga0070686_101885473 3300005544 Bacteria 510
48 Ga0070693_100998121 3300005547 Unclassified 633
49 Ga0070665_101754037 3300005548 Bacteria 628
50 Ga0070704_101088820 3300005549 Bacteria 725
51 Ga0070704_101419093 3300005549 Unclassified 637
52 Ga0070664_100009485 3300005564 Bacteria 7893
53 Ga0068857_100001059 3300005577 Bacteria 21298
54 Ga0068856_100001108 3300005614 Bacteria 28441
55 Ga0070702_100776972 3300005615 Bacteria 738
56 Ga0068864_100427274 3300005618 Unclassified 1263
57 Ga0068866_11185735 3300005718 Bacteria 551
58 Ga0081455_10081283 3300005937 Unclassified 2654
59 Ga0070717_10320406 3300006028 Bacteria 1381
60 Ga0070716_100213035 3300006173 Bacteria 1292
61 Ga0070716_101196675 3300006173 Unclassified 610
62 Ga0070712_100869453 3300006175 Unclassified 776
63 Ga0068871_102388854 3300006358 Unclassified 504
64 Ga0075433_10873073 3300006852 Bacteria 785
65 Ga0075434_102340525 3300006871 Unclassified 537
66 Ga0099794_10030106 3300007265 Bacteria 2532
67 Ga0105248_12872646 3300009177 Bacteria 549
68 Ga0105238_10276745 3300009551 Bacteria 1659
69 Ga0105239_10450183 3300010375 Bacteria 1460
70 Ga0105239_11640532 3300010375 Bacteria 744
71 Ga0157370_10313277 3300013104 Bacteria 1448
72 Ga0157369_10046301 3300013105 Bacteria 4727
73 Ga0157369_10374995 3300013105 Unclassified 1477
74 Ga0157369_11085677 3300013105 Bacteria 818
75 Ga0157378_11985070 3300013297 Bacteria 632
76 Ga0157372_10108923 3300013307 Bacteria 3171
77 Ga0157372_10435211 3300013307 Bacteria 1529
78 Ga0157372_10639536 3300013307 Unclassified 1239
79 Ga0157372_12453762 3300013307 Unclassified 599
80 Ga0163163_10063830 3300014325 Bacteria 3654
81 Ga0182008_10317177 3300014497 Bacteria 819
82 Ga0157379_11476291 3300014968 Bacteria 661
83 Ga0157376_11754290 3300014969 Bacteria 656
84 Ga0182007_10127062 3300015262 Bacteria 856
85 Ga0182005_1091898 3300015265 Bacteria 844
86 Ga0224712_10017040 3300022467 Bacteria 2400
87 Ga0207653_10011977 3300025885 Unclassified 2704
88 Ga0207692_10825711 3300025898 Bacteria 607
89 Ga0207688_10253027 3300025901 Bacteria 1067
90 Ga0207699_10524563 3300025906 Unclassified 857
91 Ga0207684_10001506 3300025910 Bacteria 24978
92 Ga0207684_10001918 3300025910 Bacteria 21575
93 Ga0207684_10531128 3300025910 Unclassified 1007
94 Ga0207707_10197348 3300025912 Bacteria 1755
95 Ga0207707_10666923 3300025912 Bacteria 875
96 Ga0207693_11449818 3300025915 Unclassified 508
97 Ga0207663_10134964 3300025916 Unclassified 1711
98 Ga0207660_11489828 3300025917 Unclassified 547
99 Ga0207649_10260482 3300025920 Bacteria 1253
100 Ga0207652_10165244 3300025921 Unclassified 1984
101 Ga0207652_11512962 3300025921 Unclassified 575
102 Ga0207646_10000312 3300025922 Bacteria 66106
103 Ga0207646_10170187 3300025922 Bacteria 1967
104 Ga0207694_10206173 3300025924 Bacteria 1601
105 Ga0207687_11204879 3300025927 Bacteria 651
106 Ga0207700_10059982 3300025928 Bacteria 2879
107 Ga0207700_10553761 3300025928 Unclassified 1021
108 Ga0207664_10127315 3300025929 Bacteria 2140
109 Ga0207644_10021592 3300025931 Bacteria 4389
110 Ga0207644_10718681 3300025931 Bacteria 833
111 Ga0207686_10447590 3300025934 Bacteria 993
112 Ga0207665_10448814 3300025939 Bacteria 989
113 Ga0207689_10608468 3300025942 Bacteria 919
114 Ga0207661_10000933 3300025944 Bacteria 19214
115 Ga0207661_10205617 3300025944 Unclassified 1733
116 Ga0207661_10599776 3300025944 Bacteria 1011
117 Ga0207679_10018408 3300025945 Bacteria 4679
118 Ga0207677_10365795 3300026023 Bacteria 1213
119 Ga0207702_10007644 3300026078 Bacteria 9199
120 Ga0207702_12320474 3300026078 Unclassified 524
121 Ga0207676_10204490 3300026095 Bacteria 1747
122 Ga0207674_10000172 3300026116 Bacteria 78347
123 Ga0207674_10851962 3300026116 Bacteria 879
124 Ga0207683_11388714 3300026121 Bacteria 649
125 Ga0307412_11667607 3300031911 Unclassified 584
126 Ga0307415_102242221 3300032126 Unclassified 535
127 Ga0373953_0243957 3300035117 Bacteria 780
128 Ga0373954_0113508 3300035118 Unclassified 1312
129 Ga0373954_0196151 3300035118 Unclassified 992
130 Ga0373955_0263057 3300035172 Unclassified 1036
131 Ga0395898_0870532 3300037466 Bacteria 840
132 Ga0395901_0676781 3300038443 Bacteria 1032
133 Ga0395901_0727154 3300038443 Unclassified 988
134 Ga0395901_1819812 3300038443 Bacteria 558
135 Ga0436362_1025072 3300039453 Unclassified 539
136 Ga0439439_0009176 3300041406 Unclassified 2348
137 Ga0439465_0268620 3300041413 Unclassified 634
138 Ga0439431_0004884 3300041997 Unclassified 2956
139 Ga0439433_0008783 3300041999 Bacteria 2196
140 Ga0439442_037898 3300042002 Bacteria 1010
141 Ga0439449_0102147 3300042007 Bacteria 1060
142 Ga0439462_0001367 3300042015 Bacteria 5388
143 Ga0439446_0002928 3300042156 Bacteria 4169
144 Ga0439434_0015062 3300042435 Unclassified 2304
145 Ga0453683_0151433 3300044673 Bacteria 1466
146 Ga0466968_0042537 3300044735 Bacteria 1921
147 Ga0466967_0023681 3300045976 Bacteria 5036
148 Ga0466967_0080062 3300045976 Unclassified 2947
149 Ga0495664_0662964 3300046477 Unclassified 618
150 Ga0495584_0467475 3300046491 Bacteria 642
151 Ga0495585_0300820 3300046492 Unclassified 789
152 Ga0495596_0152333 3300046500 Unclassified 898
153 Ga0495630_0170995 3300046517 Bacteria 1656
154 Ga0495637_0290629 3300046520 Unclassified 582
155 Ga0495663_0174201 3300046525 Bacteria 743
156 Ga0495598_0078095 3300046537 Unclassified 1057
157 Ga0495609_0161090 3300046538 Bacteria 951
158 Ga0495597_0285144 3300046542 Unclassified 643
159 Ga0495656_0205403 3300046615 Bacteria 979
160 Ga0495668_0148043 3300046616 Unclassified 1286
161 Ga0495659_0254493 3300046664 Bacteria 733
162 Ga0495588_0400326 3300046674 Bacteria 721
163 Ga0495599_0636828 3300046678 Bacteria 619
164 Ga0495636_0134367 3300047318 Bacteria 1102
165 Ga0496100_0016385 3300048903 Bacteria 4352
166 Ga0496100_0162409 3300048903 Bacteria 1602
167 Ga0496101_0048766 3300048904 Bacteria 3044
168 Ga0496101_0060921 3300048904 Bacteria 2739
169 Ga0496102_0198817 3300048905 Bacteria 1889
170 Ga0496103_0035231 3300048906 Bacteria 3064
171 Ga0496104_0016018 3300048907 Bacteria 6807
172 Ga0496104_0376867 3300048907 Bacteria 1331
173 Ga0496105_0003307 3300048908 Bacteria 11908
174 Ga0496105_0283573 3300048908 Bacteria 1335
175 Ga0496105_0724948 3300048908 Bacteria 761
176 Ga0496105_1338215 3300048908 Bacteria 521
177 Ga0496106_0013197 3300048909 Bacteria 6096
178 Ga0496106_0329850 3300048909 Bacteria 1225
179 Ga0496107_0013606 3300048910 Bacteria 5688
180 Ga0496107_0054075 3300048910 Bacteria 2897
181 Ga0496108_0187550 3300048911 Bacteria 1792
182 Ga0496108_0632352 3300048911 Bacteria 931
183 Ga0496108_1091082 3300048911 Unclassified 679
184 Ga0496108_1596762 3300048911 Bacteria 540
185 Ga0496109_0059304 3300048912 Bacteria 3496
186 Ga0496109_0291904 3300048912 Bacteria 1537
187 Ga0496109_0310327 3300048912 Unclassified 1488
188 Ga0496109_0707455 3300048912 Unclassified 945
189 Ga0496109_1296308 3300048912 Unclassified 664
190 Ga0496109_1561155 3300048912 Bacteria 595
191 Ga0496110_0053419 3300048913 Bacteria 3552
192 Ga0496110_0261936 3300048913 Bacteria 1574
193 Ga0496110_0686696 3300048913 Bacteria 925
194 Ga0496110_0741964 3300048913 Bacteria 885
195 Ga0496111_0154654 3300048914 Bacteria 1702
196 Ga0496111_0158239 3300048914 Unclassified 1681
197 Ga0496112_0005457 3300048915 Bacteria 11004
198 Ga0496112_0067679 3300048915 Bacteria 3525
199 Ga0496112_0068645 3300048915 Bacteria 3501
200 Ga0496112_1408081 3300048915 Bacteria 612
201 Ga0496112_1761227 3300048915 Bacteria 532
202 Ga0496113_0150692 3300048916 Bacteria 1834
203 Ga0496114_0011141 3300048917 Bacteria 7178
204 Ga0496114_0176227 3300048917 Bacteria 1866
205 Ga0496114_0360109 3300048917 Bacteria 1287
206 Ga0496115_0117389 3300048918 Bacteria 2189
207 Ga0496115_0179038 3300048918 Bacteria 1753
208 Ga0496115_0319660 3300048918 Unclassified 1270
209 Ga0496115_0534048 3300048918 Bacteria 939
210 Ga0501031_0658922 3300049568 Archaea 673
211 Ga0501036_0322652 3300049572 Bacteria 1290
212 Ga0501038_1288404 3300049574 Unclassified 528
213 Ga0501039_0189801 3300049575 Bacteria 1616
214 Ga0501040_0032299 3300049576 Bacteria 3543
215 Ga0501067_0021205 3300049583 Unclassified 3595
216 Ga0501068_0034392 3300049584 Unclassified 3022
217 Ga0501069_0723744 3300049585 Unclassified 601
218 Ga0501071_0803517 3300049587 Bacteria 725
219 Ga0501075_0169313 3300049591 Bacteria 1667
220 Ga0501077_0391441 3300049593 Bacteria 888
221 Ga0501079_0286463 3300049741 Bacteria 1288
222 Ga0501081_0938301 3300049743 Bacteria 653
223 Ga0495619_0195522 3300053085 Bacteria 1400
224 Ga0501084_0914503 3300054114 Bacteria 738
225 Ga0070708_100472837
226 rootL2_10175335
227 Ga0070658_10663352
228 Ga0070683_100003798
229 Ga0070683_100008887
230 Ga0070683_100491754
231 Ga0070683_100503011
232 Ga0070680_100695471
233 Ga0070680_101342004
234 Ga0070682_101163437
235 Ga0070682_101215340
236 Ga0068868_101170793
237 Ga0070660_100817424
238 Ga0070691_10006247
239 Ga0070691_10361597
240 Ga0070661_100191398
241 Ga0070671_101593526
242 Ga0070703_10004022
243 Ga0070714_100034895
244 Ga0070714_100836415
245 Ga0070713_100001482
246 Ga0070713_100263449
247 Ga0070713_100412428
248 Ga0070713_100982043
249 Ga0070710_10339557
250 Ga0070711_100337539
251 Ga0070711_100858120
252 Ga0070708_100165729
253 Ga0070708_100513375
254 Ga0070663_101614229
255 Ga0070678_100350071
256 Ga0070681_10062706
257 Ga0070681_11780873
258 Ga0070706_100565344
259 Ga0070706_101476813
260 Ga0070707_100029405
261 Ga0070707_100707326
262 Ga0070698_100704967
263 Ga0070698_100909620
264 Ga0070698_101742071
265 Ga0070699_100793699
266 Ga0070679_100679435
267 Ga0070684_100001199
268 Ga0070684_100117034
269 Ga0070684_100890521
270 Ga0070684_101872114
271 Ga0070686_101885473
272 Ga0070693_100998121
273 Ga0070665_101754037
274 Ga0070704_101088820
275 Ga0070704_101419093
276 Ga0070664_100009485
277 Ga0068857_100001059
278 Ga0068856_100001108
279 Ga0070702_100776972
280 Ga0068864_100427274
281 Ga0068866_11185735
282 Ga0081455_10081283
283 Ga0070717_10320406
284 Ga0070716_100213035
285 Ga0070716_101196675
286 Ga0070712_100869453
287 Ga0068871_102388854
288 Ga0075433_10873073
289 Ga0075434_102340525
290 Ga0099794_10030106
291 Ga0105248_12872646
292 Ga0105238_10276745
293 Ga0105239_10450183
294 Ga0105239_11640532
295 Ga0157370_10313277
296 Ga0157369_10046301
297 Ga0157369_10374995
298 Ga0157369_11085677
299 Ga0157378_11985070
300 Ga0157372_10108923
301 Ga0157372_10435211
302 Ga0157372_10639536
303 Ga0157372_12453762
304 Ga0163163_10063830
305 Ga0182008_10317177
306 Ga0157379_11476291
307 Ga0157376_11754290
308 Ga0182007_10127062
309 Ga0182005_1091898
310 Ga0224712_10017040
311 Ga0207653_10011977
312 Ga0207692_10825711
313 Ga0207688_10253027
314 Ga0207699_10524563
315 Ga0207684_10001506
316 Ga0207684_10001918
317 Ga0207684_10531128
318 Ga0207707_10197348
319 Ga0207707_10666923
320 Ga0207693_11449818
321 Ga0207663_10134964
322 Ga0207660_11489828
323 Ga0207649_10260482
324 Ga0207652_10165244
325 Ga0207652_11512962
326 Ga0207646_10000312
327 Ga0207646_10170187
328 Ga0207694_10206173
329 Ga0207687_11204879
330 Ga0207700_10059982
331 Ga0207700_10553761
332 Ga0207664_10127315
333 Ga0207644_10021592
334 Ga0207644_10718681
335 Ga0207686_10447590
336 Ga0207665_10448814
337 Ga0207689_10608468
338 Ga0207661_10000933
339 Ga0207661_10205617
340 Ga0207661_10599776
341 Ga0207679_10018408
342 Ga0207677_10365795
343 Ga0207702_10007644
344 Ga0207702_12320474
345 Ga0207676_10204490
346 Ga0207674_10000172
347 Ga0207674_10851962
348 Ga0207683_11388714
349 Ga0307412_11667607
350 Ga0307415_102242221
351 Ga0373953_0243957
352 Ga0373954_0113508
353 Ga0373954_0196151
354 Ga0373955_0263057
355 Ga0395898_0870532
356 Ga0395901_0676781
357 Ga0395901_0727154
358 Ga0395901_1819812
359 Ga0436362_1025072
360 Ga0439439_0009176
361 Ga0439465_0268620
362 Ga0439431_0004884
363 Ga0439433_0008783
364 Ga0439442_037898
365 Ga0439449_0102147
366 Ga0439462_0001367
367 Ga0439446_0002928
368 Ga0439434_0015062
369 Ga0453683_0151433
370 Ga0466968_0042537
371 Ga0466967_0023681
372 Ga0466967_0080062
373 Ga0495664_0662964
374 Ga0495584_0467475
375 Ga0495585_0300820
376 Ga0495596_0152333
377 Ga0495630_0170995
378 Ga0495637_0290629
379 Ga0495663_0174201
380 Ga0495598_0078095
381 Ga0495609_0161090
382 Ga0495597_0285144
383 Ga0495656_0205403
384 Ga0495668_0148043
385 Ga0495659_0254493
386 Ga0495588_0400326
387 Ga0495599_0636828
388 Ga0495636_0134367
389 Ga0496100_0016385
390 Ga0496100_0162409
391 Ga0496101_0048766
392 Ga0496101_0060921
393 Ga0496102_0198817
394 Ga0496103_0035231
395 Ga0496104_0016018
396 Ga0496104_0376867
397 Ga0496105_0003307
398 Ga0496105_0283573
399 Ga0496105_0724948
400 Ga0496105_1338215
401 Ga0496106_0013197
402 Ga0496106_0329850
403 Ga0496107_0013606
404 Ga0496107_0054075
405 Ga0496108_0187550
406 Ga0496108_0632352
407 Ga0496108_1091082
408 Ga0496108_1596762
409 Ga0496109_0059304
410 Ga0496109_0291904
411 Ga0496109_0310327
412 Ga0496109_0707455
413 Ga0496109_1296308
414 Ga0496109_1561155
415 Ga0496110_0053419
416 Ga0496110_0261936
417 Ga0496110_0686696
418 Ga0496110_0741964
419 Ga0496111_0154654
420 Ga0496111_0158239
421 Ga0496112_0005457
422 Ga0496112_0067679
423 Ga0496112_0068645
424 Ga0496112_1408081
425 Ga0496112_1761227
426 Ga0496113_0150692
427 Ga0496114_0011141
428 Ga0496114_0176227
429 Ga0496114_0360109
430 Ga0496115_0117389
431 Ga0496115_0179038
432 Ga0496115_0319660
433 Ga0496115_0534048
434 Ga0501031_0658922
435 Ga0501036_0322652
436 Ga0501038_1288404
437 Ga0501039_0189801
438 Ga0501040_0032299
439 Ga0501067_0021205
440 Ga0501068_0034392
441 Ga0501069_0723744
442 Ga0501071_0803517
443 Ga0501075_0169313
444 Ga0501077_0391441
445 Ga0501079_0286463
446 Ga0501081_0938301
447 Ga0495619_0195522
448 Ga0501084_0914503

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13490

zf-HC2

Putative zinc-finger

15

48

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
5wur-assembly1.cif.gz_C crystal structure of sigw in complex with its anti-sigma rsiw, an oxdized form 0.7473 2 67
5wuq-assembly2.cif.gz_D crystal structure of sigw in complex with its anti-sigma rsiw, a zinc binding form 0.7425 2 68
3hug-assembly6.cif.gz_P crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.7379 6 55
3hug-assembly6.cif.gz_F crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.7373 7 55
5wuq-assembly2.cif.gz_D crystal structure of sigw in complex with its anti-sigma rsiw, a zinc binding form 0.7133 2 68
ID Description Score Start End Superfamily
2z2sD01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Anti-sigma factor, zinc-finger domain 0.7475 9 59 1.10.10.1320
3hugH00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Anti-sigma factor, zinc-finger domain 0.7397 5 55 1.10.10.1320
3hugN00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Anti-sigma factor, zinc-finger domain 0.7387 4 55 1.10.10.1320
3hugP00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Anti-sigma factor, zinc-finger domain 0.7379 6 55 1.10.10.1320
3hugF00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Anti-sigma factor, zinc-finger domain 0.7373 7 55 1.10.10.1320
ID Description Score Start End GO Terms
AF-A0A2Z3V4P6-F1-model_v4 Putative zinc-finger domain-containing protein 0.8372 1 65
AF-A0A317J8Z3-F1-model_v4 Anti-sigma factor 0.828 1 65
AF-A0A3B0SFY0-F1-model_v4 Putative zinc-finger domain-containing protein 0.8246 1 70
AF-A0A537CKL7-F1-model_v4 Anti-sigma factor 0.8124 1 61
AF-A0A521SLU5-F1-model_v4 Putative zinc-finger domain-containing protein 0.7977 1 68 GO:0016020
GO:0016788

Map