F335506

General Info

Members Datasets Scaffolds Average Seq Length
223 128 446 309

Family's Representative Sequence

Representative Sequence 3300007076|Ga0075435_100023056|Ga0075435_1000230563
Length 348
Sequence MERPGIRSNRFARESKKGIIRFEYTLRQVARGKATGVECRPYPMLRSFGCVSLLSVALSAGGAPNGQQPPLFRTGIDLVNLGVTIADKRSNLITDLTQDDFEIYEDGKKQTIRYFAAGEAEIGPALHLGVLIDVSESMGEDIEFTKTASIKFLNRLLDAVDITVVDFDTEVRVARYSQNEFARVVERIRRKKVSGWTALYDAIGVYLDGAAGQDGRKVMLLYTDGGDTRSAIAFHELTDLLKASDATIYAIGELEHQLQSTRTDQRMKLQQIAEITGGQAFFPTAVKELDSVYDKVVSQIRAQYTLGYLSTNEKTDGAWRKVEVKVVRKDGRDLRVRARKGYFAPFKQ

Samples

Sample ID Description Type Environment
1 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
116 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
117 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
118 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
119 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
120 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
121 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
122 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
127 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
128 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.9
Nodule 0
Rhizoplane 0
Rhizosphere 99.1
Stem 0
Stem Tuber 0
Unclassified 12.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075435_100023056 3300007076 Bacteria 4806
2 SwRhRL2b_contig_981105 2162886007 Unclassified 2348
3 JGI24751J29686_10008246 3300002459 Bacteria 2131
4 Ga0065704_10094507 3300005289 Unclassified 2539
5 Ga0065715_10110197 3300005293 Bacteria 2631
6 Ga0065715_10111788 3300005293 Bacteria 2558
7 Ga0065715_10139573 3300005293 Bacteria 1874
8 Ga0065707_10010609 3300005295 Bacteria 5161
9 Ga0070690_100038542 3300005330 Unclassified 3016
10 Ga0070670_100016461 3300005331 Bacteria 6349
11 Ga0070670_100160576 3300005331 Bacteria 1948
12 Ga0068869_100072670 3300005334 Bacteria 2549
13 Ga0070660_100008741 3300005339 Bacteria 7092
14 Ga0070689_100030230 3300005340 Bacteria 4110
15 Ga0070689_100101168 3300005340 Unclassified 2281
16 Ga0070687_100006828 3300005343 Unclassified 4707
17 Ga0070687_100120686 3300005343 Bacteria 1499
18 Ga0070692_10036598 3300005345 Bacteria 2491
19 Ga0070668_100196811 3300005347 Bacteria 1653
20 Ga0070669_100001597 3300005353 Bacteria 16382
21 Ga0070669_100270648 3300005353 Bacteria 1358
22 Ga0070669_100339695 3300005353 Bacteria 1217
23 Ga0070675_100006049 3300005354 Bacteria 9271
24 Ga0070675_100008522 3300005354 Bacteria 7961
25 Ga0070675_100168267 3300005354 Bacteria 1889
26 Ga0070671_100007012 3300005355 Bacteria 9025
27 Ga0070671_100142117 3300005355 Bacteria 2025
28 Ga0070673_100236300 3300005364 Bacteria 1587
29 Ga0070688_100012408 3300005365 Bacteria 4775
30 Ga0070688_100038050 3300005365 Bacteria 2936
31 Ga0070659_100236643 3300005366 Unclassified 1510
32 Ga0070659_100436956 3300005366 Bacteria 1108
33 Ga0070667_100009555 3300005367 Bacteria 8041
34 Ga0070701_10030829 3300005438 Unclassified 2656
35 Ga0070705_100073243 3300005440 Unclassified 2078
36 Ga0070700_100006316 3300005441 Bacteria 6327
37 Ga0070700_100072818 3300005441 Bacteria 2197
38 Ga0070694_100075539 3300005444 Bacteria 2331
39 Ga0070694_100108538 3300005444 Unclassified 1974
40 Ga0070678_100169465 3300005456 Bacteria 1777
41 Ga0070662_100003704 3300005457 Bacteria 9561
42 Ga0068867_100020982 3300005459 Unclassified 4659
43 Ga0070707_100221477 3300005468 Bacteria 1843
44 Ga0070698_100073340 3300005471 Bacteria 3430
45 Ga0070699_100005740 3300005518 Bacteria 10863
46 Ga0070699_100117876 3300005518 Bacteria 2333
47 Ga0070672_100006430 3300005543 Bacteria 7900
48 Ga0070672_100171111 3300005543 Bacteria 1807
49 Ga0070686_100159113 3300005544 Unclassified 1589
50 Ga0070695_100062186 3300005545 Bacteria 2424
51 Ga0070704_100001837 3300005549 Bacteria 11703
52 Ga0070704_100036239 3300005549 Bacteria 3360
53 Ga0070704_100083083 3300005549 Bacteria 2364
54 Ga0068855_100043982 3300005563 Bacteria 5287
55 Ga0070664_100032634 3300005564 Bacteria 4355
56 Ga0068857_100151464 3300005577 Bacteria 2101
57 Ga0068859_100007496 3300005617 Bacteria 11074
58 Ga0068859_100018107 3300005617 Bacteria 7080
59 Ga0068859_100161098 3300005617 Bacteria 2323
60 Ga0068864_100035511 3300005618 Bacteria 4243
61 Ga0068864_100090225 3300005618 Bacteria 2702
62 Ga0068861_100007837 3300005719 Bacteria 7344
63 Ga0068870_10002590 3300005840 Bacteria 7566
64 Ga0068870_10041038 3300005840 Bacteria 2402
65 Ga0068858_100027200 3300005842 Bacteria 5314
66 Ga0068858_100053013 3300005842 Bacteria 3754
67 Ga0068858_100323160 3300005842 Bacteria 1475
68 Ga0068858_100335431 3300005842 Bacteria 1447
69 Ga0068860_100072703 3300005843 Bacteria 3269
70 Ga0068860_100114712 3300005843 Bacteria 2576
71 Ga0068862_100002713 3300005844 Bacteria 15541
72 Ga0068862_100269406 3300005844 Bacteria 1557
73 Ga0081455_10046876 3300005937 Bacteria 3746
74 Ga0097621_100268747 3300006237 Unclassified 1498
75 Ga0068871_100237137 3300006358 Bacteria 1585
76 Ga0068871_100307155 3300006358 Bacteria 1394
77 Ga0075428_100014918 3300006844 Bacteria 8633
78 Ga0075428_100085723 3300006844 Bacteria 3435
79 Ga0075431_100083042 3300006847 Bacteria 3307
80 Ga0075433_10085180 3300006852 Unclassified 2790
81 Ga0075433_10135199 3300006852 Bacteria 2191
82 Ga0075433_10203612 3300006852 Bacteria 1759
83 Ga0075434_100029803 3300006871 Bacteria 5371
84 Ga0075434_100111148 3300006871 Bacteria 2751
85 Ga0075434_100124534 3300006871 Bacteria 2594
86 Ga0075434_100147869 3300006871 Bacteria 2370
87 Ga0075429_100018651 3300006880 Bacteria 6008
88 Ga0075436_100003568 3300006914 Bacteria 10659
89 Ga0097620_100007496 3300006931 Bacteria 11074
90 Ga0097620_100018108 3300006931 Bacteria 7080
91 Ga0097620_100161104 3300006931 Bacteria 2323
92 Ga0075435_100227992 3300007076 Bacteria 1582
93 Ga0105240_10012235 3300009093 Bacteria 11861
94 Ga0111539_10035959 3300009094 Bacteria 5993
95 Ga0111539_10126383 3300009094 Bacteria 2995
96 Ga0111539_10245506 3300009094 Unclassified 2084
97 Ga0105245_10109635 3300009098 Bacteria 2565
98 Ga0105245_10240129 3300009098 Bacteria 1756
99 Ga0114129_10002964 3300009147 Bacteria 23755
100 Ga0114129_10006983 3300009147 Bacteria 16069
101 Ga0114129_10011851 3300009147 Bacteria 12401
102 Ga0114129_10013240 3300009147 Bacteria 11748
103 Ga0114129_10020054 3300009147 Bacteria 9514
104 Ga0114129_10036744 3300009147 Bacteria 6916
105 Ga0114129_10046158 3300009147 Bacteria 6123
106 Ga0114129_10046927 3300009147 Bacteria 6071
107 Ga0114129_10158947 3300009147 Bacteria 3089
108 Ga0114129_10218357 3300009147 Bacteria 2574
109 Ga0105248_10059501 3300009177 Bacteria 4291
110 Ga0105248_10090401 3300009177 Bacteria 3447
111 Ga0105248_10103892 3300009177 Bacteria 3203
112 Ga0105238_10490709 3300009551 Unclassified 1228
113 Ga0105249_10031855 3300009553 Bacteria 4770
114 Ga0105246_10296320 3300011119 Bacteria 1304
115 Ga0157378_10075481 3300013297 Unclassified 3035
116 Ga0157378_10444025 3300013297 Bacteria 1286
117 Ga0163162_10017867 3300013306 Bacteria 6939
118 Ga0163162_10150021 3300013306 Unclassified 2448
119 Ga0157375_10053161 3300013308 Unclassified 3984
120 Ga0157375_10495412 3300013308 Bacteria 1386
121 Ga0157380_10139009 3300014326 Unclassified 2084
122 Ga0157380_10211434 3300014326 Bacteria 1729
123 Ga0157377_10086709 3300014745 Bacteria 1841
124 Ga0157377_10122314 3300014745 Bacteria 1579
125 Ga0157379_10520917 3300014968 Bacteria 1104
126 Ga0157376_10027566 3300014969 Bacteria 4505
127 Ga0207680_10067187 3300025903 Bacteria 2207
128 Ga0207643_10006244 3300025908 Bacteria 6375
129 Ga0207643_10007578 3300025908 Bacteria 5827
130 Ga0207705_10069500 3300025909 Bacteria 2551
131 Ga0207684_10450941 3300025910 Bacteria 1104
132 Ga0207660_10078859 3300025917 Bacteria 2414
133 Ga0207662_10005789 3300025918 Bacteria 6615
134 Ga0207662_10007870 3300025918 Bacteria 5807
135 Ga0207662_10150963 3300025918 Bacteria 1477
136 Ga0207657_10020849 3300025919 Bacteria 6185
137 Ga0207652_10133594 3300025921 Bacteria 2214
138 Ga0207646_10052064 3300025922 Bacteria 3663
139 Ga0207646_10169077 3300025922 Bacteria 1974
140 Ga0207681_10000382 3300025923 Bacteria 31063
141 Ga0207681_10049063 3300025923 Bacteria 2852
142 Ga0207650_10023823 3300025925 Bacteria 4346
143 Ga0207650_10038765 3300025925 Bacteria 3482
144 Ga0207659_10000105 3300025926 Bacteria 50176
145 Ga0207659_10271352 3300025926 Bacteria 1384
146 Ga0207664_10028843 3300025929 Bacteria 4221
147 Ga0207644_10014646 3300025931 Bacteria 5252
148 Ga0207690_10160980 3300025932 Bacteria 1673
149 Ga0207690_10390706 3300025932 Bacteria 1108
150 Ga0207706_10009837 3300025933 Bacteria 8770
151 Ga0207670_10004897 3300025936 Bacteria 7282
152 Ga0207691_10009800 3300025940 Bacteria 9197
153 Ga0207691_10036117 3300025940 Bacteria 4579
154 Ga0207691_10044204 3300025940 Bacteria 4101
155 Ga0207691_10045022 3300025940 Bacteria 4059
156 Ga0207711_10240252 3300025941 Bacteria 1660
157 Ga0207711_10280478 3300025941 Bacteria 1534
158 Ga0207689_10301921 3300025942 Bacteria 1327
159 Ga0207679_10021211 3300025945 Bacteria 4399
160 Ga0207667_10044025 3300025949 Bacteria 4734
161 Ga0207651_10033177 3300025960 Bacteria 3327
162 Ga0207651_10136210 3300025960 Bacteria 1889
163 Ga0207651_10170022 3300025960 Bacteria 1718
164 Ga0207651_10211181 3300025960 Bacteria 1562
165 Ga0207712_10038129 3300025961 Unclassified 3284
166 Ga0207668_10059461 3300025972 Bacteria 2678
167 Ga0207703_10056867 3300026035 Bacteria 3188
168 Ga0207703_10274163 3300026035 Bacteria 1529
169 Ga0207708_10017146 3300026075 Bacteria 5451
170 Ga0207708_10056818 3300026075 Bacteria 2986
171 Ga0207641_10085812 3300026088 Bacteria 2744
172 Ga0207648_10000246 3300026089 Bacteria 58501
173 Ga0207648_10333939 3300026089 Bacteria 1364
174 Ga0207676_10008219 3300026095 Bacteria 7427
175 Ga0207676_10126387 3300026095 Unclassified 2166
176 Ga0207676_10141316 3300026095 Bacteria 2061
177 Ga0207676_10422030 3300026095 Unclassified 1251
178 Ga0207674_10041187 3300026116 Bacteria 4779
179 Ga0207675_100027315 3300026118 Bacteria 5316
180 Ga0207675_100085636 3300026118 Unclassified 2958
181 Ga0207698_10431294 3300026142 Unclassified 1267
182 Ga0207428_10009758 3300027907 Bacteria 8603
183 Ga0268265_10002093 3300028380 Bacteria 15550
184 Ga0268264_10022224 3300028381 Bacteria 5178
185 Ga0307408_100102254 3300031548 Bacteria 2185
186 Ga0307416_100076816 3300032002 Bacteria 2801
187 Ga0439460_0019741 3300042461 Bacteria 1828
188 Ga0466967_0752853 3300045976 Bacteria 966
189 Ga0495633_0081101 3300046558 Bacteria 1510
190 Ga0501034_0126127 3300049571 Bacteria 2545
191 Ga0501043_0136958 3300049579 Bacteria 1918
192 Ga0501047_0043476 3300049581 Bacteria 4340
193 Ga0501076_0063865 3300049592 Bacteria 2934
194 Ga0501080_0372803 3300049742 Unclassified 1287
195 Ga0501044_0065663 3300049823 Bacteria 3700
196 nmdc:mga0k408_9336_c1 3300050493 Bacteria 5285
197 nmdc:mga06z11_4720_c1 3300050494 Bacteria 5387
198 nmdc:mga05p37_118244_c1 3300050507 Bacteria 3257
199 nmdc:mga05p37_1282_c2 3300050507 Bacteria 12642
200 nmdc:mga05p37_140241_c1 3300050507 Bacteria 2962
201 nmdc:mga05p37_21445_c1 3300050507 Bacteria 7824
202 nmdc:mga05p37_279897_c1 3300050507 Bacteria 1990
203 nmdc:mga05p37_4516_c1 3300050507 Bacteria 16267
204 nmdc:mga05p37_54192_c1 3300050507 Bacteria 4934
205 nmdc:mga05p37_5694_c1 3300050507 Bacteria 14644
206 nmdc:mga09592_355452_c1 3300050508 Bacteria 1268
207 nmdc:mga06r32_91539_c1 3300050510 Bacteria 2972
208 nmdc:mga08y16_42078_c1 3300050511 Unclassified 4785
209 nmdc:mga08y16_52165_c1 3300050511 Unclassified 4279
210 nmdc:mga0n895_127581_c1 3300050512 Bacteria 2568
211 nmdc:mga0n895_272909_c1 3300050512 Bacteria 1715
212 nmdc:mga0n895_45885_c1 3300050512 Bacteria 4267
213 nmdc:mga0n895_59376_c1 3300050512 Bacteria 3773
214 nmdc:mga0rr50_156028_c1 3300050513 Bacteria 1849
215 nmdc:mga0rr50_370958_c1 3300050513 Bacteria 1206
216 nmdc:mga0rr50_43064_c1 3300050513 Bacteria 3301
217 nmdc:mga0rr50_75804_c1 3300050513 Bacteria 2580
218 nmdc:mga08x19_10588_c1 3300050514 Bacteria 5543
219 nmdc:mga08x19_16154_c1 3300050514 Bacteria 4548
220 nmdc:mga0a205_348061_c1 3300050515 Bacteria 1350
221 nmdc:mga0a205_3960_c2 3300050515 Bacteria 7327
222 nmdc:mga0a205_7159_c2 3300050515 Unclassified 2881
223 Ga0501084_0401401 3300054114 Bacteria 1159
224 Ga0075435_100023056
225 SwRhRL2b_contig_981105
226 JGI24751J29686_10008246
227 Ga0065704_10094507
228 Ga0065715_10110197
229 Ga0065715_10111788
230 Ga0065715_10139573
231 Ga0065707_10010609
232 Ga0070690_100038542
233 Ga0070670_100016461
234 Ga0070670_100160576
235 Ga0068869_100072670
236 Ga0070660_100008741
237 Ga0070689_100030230
238 Ga0070689_100101168
239 Ga0070687_100006828
240 Ga0070687_100120686
241 Ga0070692_10036598
242 Ga0070668_100196811
243 Ga0070669_100001597
244 Ga0070669_100270648
245 Ga0070669_100339695
246 Ga0070675_100006049
247 Ga0070675_100008522
248 Ga0070675_100168267
249 Ga0070671_100007012
250 Ga0070671_100142117
251 Ga0070673_100236300
252 Ga0070688_100012408
253 Ga0070688_100038050
254 Ga0070659_100236643
255 Ga0070659_100436956
256 Ga0070667_100009555
257 Ga0070701_10030829
258 Ga0070705_100073243
259 Ga0070700_100006316
260 Ga0070700_100072818
261 Ga0070694_100075539
262 Ga0070694_100108538
263 Ga0070678_100169465
264 Ga0070662_100003704
265 Ga0068867_100020982
266 Ga0070707_100221477
267 Ga0070698_100073340
268 Ga0070699_100005740
269 Ga0070699_100117876
270 Ga0070672_100006430
271 Ga0070672_100171111
272 Ga0070686_100159113
273 Ga0070695_100062186
274 Ga0070704_100001837
275 Ga0070704_100036239
276 Ga0070704_100083083
277 Ga0068855_100043982
278 Ga0070664_100032634
279 Ga0068857_100151464
280 Ga0068859_100007496
281 Ga0068859_100018107
282 Ga0068859_100161098
283 Ga0068864_100035511
284 Ga0068864_100090225
285 Ga0068861_100007837
286 Ga0068870_10002590
287 Ga0068870_10041038
288 Ga0068858_100027200
289 Ga0068858_100053013
290 Ga0068858_100323160
291 Ga0068858_100335431
292 Ga0068860_100072703
293 Ga0068860_100114712
294 Ga0068862_100002713
295 Ga0068862_100269406
296 Ga0081455_10046876
297 Ga0097621_100268747
298 Ga0068871_100237137
299 Ga0068871_100307155
300 Ga0075428_100014918
301 Ga0075428_100085723
302 Ga0075431_100083042
303 Ga0075433_10085180
304 Ga0075433_10135199
305 Ga0075433_10203612
306 Ga0075434_100029803
307 Ga0075434_100111148
308 Ga0075434_100124534
309 Ga0075434_100147869
310 Ga0075429_100018651
311 Ga0075436_100003568
312 Ga0097620_100007496
313 Ga0097620_100018108
314 Ga0097620_100161104
315 Ga0075435_100227992
316 Ga0105240_10012235
317 Ga0111539_10035959
318 Ga0111539_10126383
319 Ga0111539_10245506
320 Ga0105245_10109635
321 Ga0105245_10240129
322 Ga0114129_10002964
323 Ga0114129_10006983
324 Ga0114129_10011851
325 Ga0114129_10013240
326 Ga0114129_10020054
327 Ga0114129_10036744
328 Ga0114129_10046158
329 Ga0114129_10046927
330 Ga0114129_10158947
331 Ga0114129_10218357
332 Ga0105248_10059501
333 Ga0105248_10090401
334 Ga0105248_10103892
335 Ga0105238_10490709
336 Ga0105249_10031855
337 Ga0105246_10296320
338 Ga0157378_10075481
339 Ga0157378_10444025
340 Ga0163162_10017867
341 Ga0163162_10150021
342 Ga0157375_10053161
343 Ga0157375_10495412
344 Ga0157380_10139009
345 Ga0157380_10211434
346 Ga0157377_10086709
347 Ga0157377_10122314
348 Ga0157379_10520917
349 Ga0157376_10027566
350 Ga0207680_10067187
351 Ga0207643_10006244
352 Ga0207643_10007578
353 Ga0207705_10069500
354 Ga0207684_10450941
355 Ga0207660_10078859
356 Ga0207662_10005789
357 Ga0207662_10007870
358 Ga0207662_10150963
359 Ga0207657_10020849
360 Ga0207652_10133594
361 Ga0207646_10052064
362 Ga0207646_10169077
363 Ga0207681_10000382
364 Ga0207681_10049063
365 Ga0207650_10023823
366 Ga0207650_10038765
367 Ga0207659_10000105
368 Ga0207659_10271352
369 Ga0207664_10028843
370 Ga0207644_10014646
371 Ga0207690_10160980
372 Ga0207690_10390706
373 Ga0207706_10009837
374 Ga0207670_10004897
375 Ga0207691_10009800
376 Ga0207691_10036117
377 Ga0207691_10044204
378 Ga0207691_10045022
379 Ga0207711_10240252
380 Ga0207711_10280478
381 Ga0207689_10301921
382 Ga0207679_10021211
383 Ga0207667_10044025
384 Ga0207651_10033177
385 Ga0207651_10136210
386 Ga0207651_10170022
387 Ga0207651_10211181
388 Ga0207712_10038129
389 Ga0207668_10059461
390 Ga0207703_10056867
391 Ga0207703_10274163
392 Ga0207708_10017146
393 Ga0207708_10056818
394 Ga0207641_10085812
395 Ga0207648_10000246
396 Ga0207648_10333939
397 Ga0207676_10008219
398 Ga0207676_10126387
399 Ga0207676_10141316
400 Ga0207676_10422030
401 Ga0207674_10041187
402 Ga0207675_100027315
403 Ga0207675_100085636
404 Ga0207698_10431294
405 Ga0207428_10009758
406 Ga0268265_10002093
407 Ga0268264_10022224
408 Ga0307408_100102254
409 Ga0307416_100076816
410 Ga0439460_0019741
411 Ga0466967_0752853
412 Ga0495633_0081101
413 Ga0501034_0126127
414 Ga0501043_0136958
415 Ga0501047_0043476
416 Ga0501076_0063865
417 Ga0501080_0372803
418 Ga0501044_0065663
419 nmdc:mga0k408_9336_c1
420 nmdc:mga06z11_4720_c1
421 nmdc:mga05p37_118244_c1
422 nmdc:mga05p37_1282_c2
423 nmdc:mga05p37_140241_c1
424 nmdc:mga05p37_21445_c1
425 nmdc:mga05p37_279897_c1
426 nmdc:mga05p37_4516_c1
427 nmdc:mga05p37_54192_c1
428 nmdc:mga05p37_5694_c1
429 nmdc:mga09592_355452_c1
430 nmdc:mga06r32_91539_c1
431 nmdc:mga08y16_42078_c1
432 nmdc:mga08y16_52165_c1
433 nmdc:mga0n895_127581_c1
434 nmdc:mga0n895_272909_c1
435 nmdc:mga0n895_45885_c1
436 nmdc:mga0n895_59376_c1
437 nmdc:mga0rr50_156028_c1
438 nmdc:mga0rr50_370958_c1
439 nmdc:mga0rr50_43064_c1
440 nmdc:mga0rr50_75804_c1
441 nmdc:mga08x19_10588_c1
442 nmdc:mga08x19_16154_c1
443 nmdc:mga0a205_348061_c1
444 nmdc:mga0a205_3960_c2
445 nmdc:mga0a205_7159_c2
446 Ga0501084_0401401

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00092

VWA

von Willebrand factor type A domain

127

295

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wfq-assembly1.cif.gz_A crystal structure of tfiih subunit 0.8251 75 251
8byq-assembly1.cif.gz_4 rna polymerase ii pre-initiation complex with the proximal +1 nucleosome (pic-nuc10w) 0.8156 81 251
8e56-assembly1.cif.gz_F rabbit l-type voltage-gated calcium channel cav1.1 in the presence of amiodarone at 2.8 angstrom resolution 0.8024 73 254
8ce6-assembly1.cif.gz_A crystal structure of human cd11b i domain in p212121 space group 0.8 79 254
1aox-assembly1.cif.gz_A i domain from integrin alpha2-beta1 0.7987 79 255
ID Description Score Start End Superfamily
af_I1LHY4_78_263_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8538 80 250 3.40.50.410
af_A0A0P0WT04_289_392_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8447 82 162 3.40.50.410
af_P34567_58_244_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8368 79 250 3.40.50.410
af_Q13349_134_288_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8298 80 207 3.40.50.410
af_Q8IEG6_79_264_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8296 80 250 3.40.50.410
ID Description Score Start End GO Terms
AF-A0A6L4AXY4-F1-model_v4 VWA domain-containing protein 0.9432 30 297
AF-A0A2V8G896-F1-model_v4 VWFA domain-containing protein 0.9394 17 302
AF-A0A355F794-F1-model_v4 VWFA domain-containing protein 0.9374 31 297
AF-A0A2V8GPM3-F1-model_v4 VWFA domain-containing protein 0.9366 31 302
AF-A0A2V8JTE5-F1-model_v4 VWFA domain-containing protein 0.9338 32 298

Map