F335006

General Info

Members Datasets Scaffolds Average Seq Length
222 150 197 490

Family's Representative Sequence

Representative Sequence 3300053080|Ga0500635_0000010|Ga0500635_0000010_28099_29751
Length 550
Sequence MSLARTYAVALNGLRGDLVEVEADIAAGLPTFVLIGLPDTALGESRKRVVAAAVNSGCPLTQRKLTINLSPAALRKQGSAFDLAIAVAALAAAGDISAESTARVVHLGELGLDGRLRPVPGVLPSVVAAKAAGFERVIVPEANADEARLVDGIDITSVTSLREAAIWHGSDLEPADALEPPVVVAATIDAPPQRDDLDMADVMGNEEVVEALAVAAAGGHHVSMIGPPGAGKTMIAARLPTILPDLTDRQALEVTSIRSLSGVRIGPDLIRRPPFEAPHHTASAVAMVGGGSTRIVPGAIVRASHGVLFLDEAAEFPSGVLDALRQPLESGSITIHRASGTATFPARFQLVLAANPCPCGRYGSADDECTCTPIARRRYLAKLSGPLLDRVDIRLTVRRLSIAALRDASASRVSTPVGSARYASDHRADEEPGTVIDGAPAGERAQASLRSSRAMKERVVSARGAAAERLLDTPWTRNAEVTGSWLRQRGNRLPTATTASLDRALERGSLTMRGYDRTLRLAWTVADLDGAAVPTSHHVGAALYLRRGIA

Samples

Sample ID Description Type Environment
1 2643221549 Agromyces sp. Root1464 Isolate Unclassified
2 2643221619 Agromyces sp. Root81 Isolate Unclassified
3 2643221679 Angustibacter sp. Root456 Isolate Unclassified
4 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
5 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
6 2808606372 Agromyces sp. 23-23 Isolate Unclassified
7 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
8 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
9 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
10 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
11 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
12 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
13 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
14 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
15 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
16 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
17 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
18 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
19 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
20 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
21 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
22 2928153084 Leifsonia sp. 563 Isolate Unclassified
23 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
24 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
25 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
26 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
27 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
28 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
29 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
30 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
31 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
32 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
33 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
34 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
35 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
36 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
37 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
38 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
39 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
40 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
41 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
42 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
43 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
44 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
68 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
71 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
91 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
92 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
93 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
94 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
100 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
101 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
107 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
108 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
109 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
110 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
120 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
121 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
122 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
125 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
126 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
147 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
148 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
150 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.84
Metatranscriptomes 0.9
Isolates 11.26

Biome Distribution

Category Percentage (%)
Aerial Root 0.45
Bulb 0
Endosphere 13.51
Nodule 0
Rhizoplane 3.15
Rhizosphere 68.47
Stem 0
Stem Tuber 0.45
Unclassified 13.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10019564 3300001990 Bacteria 2165
2 JGI24735J21928_10005854 3300002067 Bacteria 4062
3 JGI25164J39214_1000468 3300002772 Bacteria 20314
4 JGI25165J46597_1000002 3300003214 Bacteria 765387
5 rootH1_10002170 3300003323 Bacteria 4654
6 Ga0006562J51391_1009081 3300003578 Bacteria 5000
7 Ga0055539_1000058 3300003752 Bacteria 149354
8 Ga0055533_1000001 3300003756 Bacteria 1863437
9 Ga0055525_1000600 3300003759 Bacteria 15244
10 Ga0055527_1000012 3300003760 Bacteria 348744
11 Ga0055542_1000017 3300003762 Bacteria 348744
12 Ga0055529_1000023 3300003763 Bacteria 314383
13 Ga0070658_10030550 3300005327 Bacteria 4328
14 Ga0070670_100092961 3300005331 Bacteria 2594
15 Ga0068868_100040762 3300005338 Bacteria 3615
16 Ga0070659_100004787 3300005366 Bacteria 9678
17 Ga0070714_100066755 3300005435 Bacteria 3100
18 Ga0070713_100080198 3300005436 Bacteria 2782
19 Ga0070713_100151954 3300005436 Bacteria 2060
20 Ga0068853_100008725 3300005539 Bacteria 8154
21 Ga0068855_100014429 3300005563 Bacteria 9513
22 Ga0068855_100107147 3300005563 Bacteria 3211
23 Ga0068857_100002864 3300005577 Bacteria 14183
24 Ga0068856_100020849 3300005614 Bacteria 6370
25 Ga0068852_100004370 3300005616 Bacteria 9985
26 Ga0068851_10000001 3300005834 Bacteria 495512
27 Ga0068858_100000276 3300005842 Bacteria 55258
28 Ga0105240_10002898 3300009093 Bacteria 27065
29 Ga0105240_10039120 3300009093 Bacteria 6076
30 Ga0105245_10020678 3300009098 Bacteria 5770
31 Ga0105241_10004538 3300009174 Bacteria 10274
32 Ga0105248_10013171 3300009177 Bacteria 9105
33 Ga0105248_10107256 3300009177 Bacteria 3149
34 Ga0105237_10001412 3300009545 Bacteria 31744
35 Ga0105238_10012883 3300009551 Bacteria 8441
36 Ga0105238_10046938 3300009551 Bacteria 4355
37 Ga0163163_10008322 3300014325 Bacteria 9210
38 Ga0157380_10064593 3300014326 Bacteria 2939
39 Ga0157379_10009067 3300014968 Bacteria 8668
40 Ga0206353_11483285 3300020082 Bacteria 10404
41 Ga0209566_100026 3300025225 Bacteria 367457
42 Ga0209674_100001 3300025226 Bacteria 4013750
43 Ga0209672_100003 3300025228 Bacteria 1560476
44 Ga0209147_100734 3300025229 Bacteria 16286
45 Ga0209563_100001 3300025230 Bacteria 4013775
46 Ga0209563_100592 3300025230 Bacteria 11923
47 Ga0207427_100089 3300025231 Bacteria 135504
48 Ga0209437_100684 3300025233 Bacteria 18061
49 Ga0209677_100001 3300025253 Bacteria 4013787
50 Ga0209677_101211 3300025253 Bacteria 11751
51 Ga0209148_1000004 3300025254 Bacteria 1844481
52 Ga0209148_1001063 3300025254 Bacteria 16857
53 Ga0209233_1000001 3300025261 Bacteria 2992747
54 Ga0209455_1000022 3300025272 Bacteria 688910
55 Ga0207656_10000002 3300025321 Bacteria 792178
56 Ga0207654_10000001 3300025911 Bacteria 1816198
57 Ga0207695_10002597 3300025913 Bacteria 26478
58 Ga0207695_10003601 3300025913 Bacteria 21679
59 Ga0207671_10000002 3300025914 Bacteria 1144816
60 Ga0207693_10128158 3300025915 Bacteria 1995
61 Ga0207694_10000274 3300025924 Bacteria 48845
62 Ga0207650_10083300 3300025925 Bacteria 2429
63 Ga0207700_10007208 3300025928 Bacteria 6779
64 Ga0207690_10001692 3300025932 Bacteria 13602
65 Ga0207711_10002762 3300025941 Bacteria 15463
66 Ga0207711_10032067 3300025941 Bacteria 4441
67 Ga0207667_10000272 3300025949 Bacteria 71730
68 Ga0207667_10012849 3300025949 Bacteria 9622
69 Ga0207667_10220472 3300025949 Bacteria 1943
70 Ga0207658_10095505 3300025986 Bacteria 2316
71 Ga0207658_10110453 3300025986 Bacteria 2172
72 Ga0207677_10021535 3300026023 Bacteria 3941
73 Ga0207703_10000141 3300026035 Bacteria 86068
74 Ga0207639_10008189 3300026041 Bacteria 7154
75 Ga0207702_10105345 3300026078 Bacteria 2498
76 Ga0207702_10129983 3300026078 Bacteria 2265
77 Ga0207641_10018261 3300026088 Bacteria 5749
78 Ga0207698_10002502 3300026142 Bacteria 10904
79 Ga0207698_10002624 3300026142 Bacteria 10681
80 Ga0265338_10033000 3300028800 Bacteria 5036
81 Ga0373953_0005713 3300035117 Bacteria 4056
82 Ga0373956_0001701 3300035119 Bacteria 9070
83 Ga0373957_0004890 3300035120 Bacteria 4113
84 Ga0373924_0003193 3300035410 Bacteria 5608
85 Ga0395900_0014994 3300037418 Bacteria 7899
86 Ga0395900_0179552 3300037418 Bacteria 2152
87 Ga0395898_0000473 3300037466 Bacteria 80586
88 Ga0436364_1345748 3300037853 Bacteria 2877
89 Ga0395901_0146422 3300038443 Bacteria 2482
90 Ga0451793_0568863 3300041452 Bacteria 2709
91 Ga0466965_0000009 3300044683 Bacteria 122488
92 Ga0466970_0007695 3300044765 Bacteria 5406
93 Ga0451576_0278705 3300045051 Bacteria 1748
94 Ga0466967_0254010 3300045976 Bacteria 1680
95 Ga0495590_0000743 3300046457 Bacteria 14782
96 Ga0495638_0033783 3300046460 Bacteria 3269
97 Ga0495653_0124922 3300046463 Bacteria 1828
98 Ga0495650_0001193 3300046471 Bacteria 27506
99 Ga0495618_0020216 3300046514 Bacteria 4100
100 Ga0495667_0002632 3300046559 Bacteria 11987
101 Ga0495656_0008960 3300046615 Bacteria 3590
102 Ga0495604_0006419 3300047317 Bacteria 9334
103 Ga0495680_0008208 3300047322 Bacteria 9515
104 Ga0495684_0003810 3300047471 Bacteria 11752
105 Ga0496102_0065688 3300048905 Bacteria 3326
106 Ga0496104_0127080 3300048907 Bacteria 2448
107 Ga0496105_0248528 3300048908 Bacteria 1441
108 Ga0496107_0017283 3300048910 Bacteria 5072
109 Ga0496115_0018645 3300048918 Bacteria 5333
110 Ga0496115_0063366 3300048918 Bacteria 2983
111 Ga0496117_0001198 3300048920 Bacteria 39019
112 Ga0496117_0010667 3300048920 Bacteria 8324
113 Ga0496117_0047902 3300048920 Bacteria 3059
114 Ga0496117_0053915 3300048920 Bacteria 2821
115 Ga0496118_0001224 3300048921 Bacteria 39523
116 Ga0496118_0011502 3300048921 Bacteria 8628
117 Ga0496119_0001615 3300048922 Bacteria 26709
118 Ga0496119_0005816 3300048922 Bacteria 11660
119 Ga0496119_0019066 3300048922 Bacteria 5072
120 Ga0496120_0000426 3300048923 Bacteria 66901
121 Ga0496121_0000891 3300048924 Bacteria 53863
122 Ga0496121_0037298 3300048924 Bacteria 4320
123 Ga0496122_0092662 3300048925 Bacteria 2053
124 Ga0496122_0108971 3300048925 Bacteria 1825
125 Ga0496123_0010364 3300048926 Bacteria 8250
126 Ga0496124_0013546 3300048927 Bacteria 7952
127 Ga0496126_0096083 3300048929 Bacteria 2598
128 Ga0496126_0150547 3300048929 Bacteria 1995
129 Ga0501031_0004759 3300049568 Bacteria 8819
130 Ga0501032_0006456 3300049569 Bacteria 8623
131 Ga0501032_0032994 3300049569 Bacteria 3548
132 Ga0501033_0011820 3300049570 Bacteria 6673
133 Ga0501033_0013752 3300049570 Bacteria 6155
134 Ga0501033_0029380 3300049570 Bacteria 4131
135 Ga0501034_0008785 3300049571 Bacteria 10632
136 Ga0501034_0010472 3300049571 Bacteria 9655
137 Ga0501034_0019819 3300049571 Bacteria 6874
138 Ga0501034_0059948 3300049571 Bacteria 3822
139 Ga0501034_0064840 3300049571 Bacteria 3666
140 Ga0501034_0064862 3300049571 Bacteria 3665
141 Ga0501034_0075323 3300049571 Bacteria 3382
142 Ga0501034_0081876 3300049571 Bacteria 3230
143 Ga0501034_0192672 3300049571 Bacteria 2000
144 Ga0501036_0002259 3300049572 Bacteria 15044
145 Ga0501036_0057199 3300049572 Bacteria 3303
146 Ga0501037_0001317 3300049573 Bacteria 18219
147 Ga0501037_0002192 3300049573 Bacteria 14116
148 Ga0501037_0004862 3300049573 Bacteria 9777
149 Ga0501037_0008024 3300049573 Bacteria 7735
150 Ga0501037_0064240 3300049573 Bacteria 2676
151 Ga0501037_0066498 3300049573 Bacteria 2626
152 Ga0501037_0072077 3300049573 Bacteria 2513
153 Ga0501038_0000302 3300049574 Bacteria 41930
154 Ga0501038_0005822 3300049574 Bacteria 11409
155 Ga0501039_0003638 3300049575 Bacteria 11552
156 Ga0501042_0061691 3300049578 Bacteria 2678
157 Ga0501043_0002730 3300049579 Bacteria 14759
158 Ga0501043_0011016 3300049579 Bacteria 7083
159 Ga0501043_0033693 3300049579 Bacteria 4030
160 Ga0501043_0121353 3300049579 Bacteria 2050
161 Ga0501046_0000772 3300049580 Bacteria 30987
162 Ga0501046_0013263 3300049580 Bacteria 6982
163 Ga0501046_0074646 3300049580 Bacteria 2630
164 Ga0501047_0003979 3300049581 Bacteria 13890
165 Ga0501047_0009789 3300049581 Bacteria 9057
166 Ga0501047_0019312 3300049581 Bacteria 6538
167 Ga0501047_0019548 3300049581 Bacteria 6498
168 Ga0501047_0024776 3300049581 Bacteria 5759
169 Ga0501047_0028721 3300049581 Bacteria 5363
170 Ga0501047_0049232 3300049581 Bacteria 4069
171 Ga0501048_0002715 3300049582 Bacteria 13499
172 Ga0501048_0004488 3300049582 Bacteria 10622
173 Ga0501070_0006161 3300049586 Bacteria 10222
174 Ga0501070_0018390 3300049586 Bacteria 5863
175 Ga0501070_0082472 3300049586 Bacteria 2661
176 Ga0501073_0020475 3300049589 Bacteria 4770
177 Ga0501073_0030864 3300049589 Bacteria 3826
178 Ga0501080_0161070 3300049742 Bacteria 2072
179 Ga0501035_0001884 3300049822 Bacteria 21118
180 Ga0501035_0009756 3300049822 Bacteria 8923
181 Ga0501035_0012628 3300049822 Bacteria 7804
182 Ga0501035_0014765 3300049822 Bacteria 7213
183 Ga0501035_0017886 3300049822 Bacteria 6538
184 Ga0501035_0057229 3300049822 Bacteria 3476
185 Ga0501035_0091253 3300049822 Bacteria 2681
186 Ga0501044_0001106 3300049823 Bacteria 32051
187 Ga0501044_0005810 3300049823 Bacteria 13669
188 Ga0501044_0021539 3300049823 Bacteria 6874
189 Ga0501044_0046289 3300049823 Bacteria 4505
190 Ga0500635_0000010 3300053080 Bacteria 147500
191 Ga0500643_000072 3300053087 Bacteria 112810
192 Ga0500651_0000368 3300053093 Bacteria 24842
193 Ga0500568_0000028 3300053139 Bacteria 161589
194 Ga0500568_0000304 3300053139 Bacteria 39367
195 Ga0500568_0001635 3300053139 Bacteria 14132
196 Ga0500568_0006164 3300053139 Bacteria 6066
197 Ga0500620_000032 3300053155 Bacteria 27722

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035410 Ga0373924_0003193 Ga0373924_0003193_829_2115 401
2 3300049580 Ga0501046_0074646 Ga0501046_0074646_1115_2452 407
3 3300048908 Ga0496105_0248528 Ga0496105_0248528_138_1421 421
4 3300038443 Ga0395901_0146422 Ga0395901_0146422_582_2120 437
5 3300045051 Ga0451576_0278705 Ga0451576_0278705_27_1409 441
6 3300037418 Ga0395900_0179552 Ga0395900_0179552_540_2075 444
7 3300025986 Ga0207658_10110453 Ga0207658_101104533 454
8 3300045976 Ga0466967_0254010 Ga0466967_0254010_92_1627 460
9 3300049569 Ga0501032_0006456 Ga0501032_0006456_812_2347 460
10 3300049571 Ga0501034_0010472 Ga0501034_0010472_1738_3273 460
11 3300049572 Ga0501036_0057199 Ga0501036_0057199_1044_2579 460
12 3300049573 Ga0501037_0004862 Ga0501037_0004862_2804_4339 460
13 3300049574 Ga0501038_0005822 Ga0501038_0005822_4432_5967 460
14 3300049575 Ga0501039_0003638 Ga0501039_0003638_1649_3184 460
15 3300049579 Ga0501043_0011016 Ga0501043_0011016_50_1585 460
16 3300049580 Ga0501046_0013263 Ga0501046_0013263_1153_2688 460
17 3300049581 Ga0501047_0003979 Ga0501047_0003979_6004_7539 460
18 3300049582 Ga0501048_0002715 Ga0501048_0002715_4671_6206 460
19 3300049586 Ga0501070_0082472 Ga0501070_0082472_258_1793 460
20 3300049822 Ga0501035_0012628 Ga0501035_0012628_1732_3267 460
21 3300028800 Ga0265338_10033000 Ga0265338_100330003 465
22 3300046615 Ga0495656_0008960 Ga0495656_0008960_1456_2988 467
23 3300048918 Ga0496115_0018645 Ga0496115_0018645_3626_5200 467
24 3300049571 Ga0501034_0064862 Ga0501034_0064862_1966_3498 467
25 3300049568 Ga0501031_0004759 Ga0501031_0004759_5339_6871 468
26 3300049571 Ga0501034_0059948 Ga0501034_0059948_1648_3180 468
27 3300049572 Ga0501036_0002259 Ga0501036_0002259_3496_5028 468
28 3300049573 Ga0501037_0002192 Ga0501037_0002192_5653_7185 468
29 3300049579 Ga0501043_0002730 Ga0501043_0002730_7951_9483 468
30 3300049580 Ga0501046_0000772 Ga0501046_0000772_5955_7487 468
31 3300049581 Ga0501047_0019312 Ga0501047_0019312_3359_4891 468
32 3300049582 Ga0501048_0004488 Ga0501048_0004488_6564_8096 468
33 3300049586 Ga0501070_0006161 Ga0501070_0006161_4225_5757 468
34 3300049822 Ga0501035_0017886 Ga0501035_0017886_1648_3180 468
35 3300049823 Ga0501044_0005810 Ga0501044_0005810_8891_10423 468
36 3300009177 Ga0105248_10013171 Ga0105248_100131715 469
37 3300025941 Ga0207711_10002762 Ga0207711_1000276213 469
38 3300026088 Ga0207641_10018261 Ga0207641_100182613 469
39 3300005616 Ga0068852_100004370 Ga0068852_1000043709 470
40 3300026142 Ga0207698_10002502 Ga0207698_1000250210 470
41 3300049570 Ga0501033_0029380 Ga0501033_0029380_2281_3816 472
42 3300049571 Ga0501034_0081876 Ga0501034_0081876_463_1998 472
43 3300049581 Ga0501047_0024776 Ga0501047_0024776_1188_2723 472
44 3300049742 Ga0501080_0161070 Ga0501080_0161070_218_1753 472
45 3300049822 Ga0501035_0057229 Ga0501035_0057229_687_2222 472
46 3300049571 Ga0501034_0019819 Ga0501034_0019819_4361_5896 473
47 3300049573 Ga0501037_0008024 Ga0501037_0008024_4477_6012 473
48 3300049579 Ga0501043_0033693 Ga0501043_0033693_1241_2776 473
49 3300049581 Ga0501047_0028721 Ga0501047_0028721_2701_4236 473
50 3300049589 Ga0501073_0020475 Ga0501073_0020475_2497_4032 473
51 3300049822 Ga0501035_0009756 Ga0501035_0009756_5519_7054 473
52 3300049823 Ga0501044_0021539 Ga0501044_0021539_4361_5896 473
53 3300005327 Ga0070658_10030550 Ga0070658_100305503 474
54 3300005834 Ga0068851_10000001 Ga0068851_10000001481 474
55 3300009545 Ga0105237_10001412 Ga0105237_100014126 474
56 3300009551 Ga0105238_10012883 Ga0105238_1001288310 474
57 3300025321 Ga0207656_10000002 Ga0207656_10000002448 474
58 3300025914 Ga0207671_10000002 Ga0207671_10000002742 474
59 3300025924 Ga0207694_10000274 Ga0207694_1000027425 474
60 3300026142 Ga0207698_10002624 Ga0207698_1000262410 474
61 3300049570 Ga0501033_0011820 Ga0501033_0011820_2892_4427 474
62 3300049571 Ga0501034_0064840 Ga0501034_0064840_1870_3405 474
63 3300049573 Ga0501037_0064240 Ga0501037_0064240_471_2006 474
64 3300049581 Ga0501047_0049232 Ga0501047_0049232_2250_3785 474
65 3300049822 Ga0501035_0091253 Ga0501035_0091253_248_1783 474
66 3300049571 Ga0501034_0075323 Ga0501034_0075323_1254_2786 475
67 3300049571 Ga0501034_0192672 Ga0501034_0192672_185_1717 475
68 3300049589 Ga0501073_0030864 Ga0501073_0030864_729_2261 475
69 3300053139 Ga0500568_0001635 Ga0500568_0001635_10280_11812 475
70 3300002772 JGI25164J39214_1000468 JGI25164J39214_100046812 476
71 3300003214 JGI25165J46597_1000002 JGI25165J46597_1000002400 476
72 3300025231 Ga0207427_100089 Ga0207427_100089110 476
73 3300025233 Ga0209437_100684 Ga0209437_1006842 476
74 3300025261 Ga0209233_1000001 Ga0209233_10000012405 476
75 3300048918 Ga0496115_0063366 Ga0496115_0063366_649_2196 476
76 3300025913 Ga0207695_10002597 Ga0207695_1000259725 477
77 3300049578 Ga0501042_0061691 Ga0501042_0061691_128_1663 478
78 3300014325 Ga0163163_10008322 Ga0163163_100083225 480
79 3300049573 Ga0501037_0001317 Ga0501037_0001317_1229_2761 480
80 3300049581 Ga0501047_0009789 Ga0501047_0009789_6183_7715 480
81 3300049822 Ga0501035_0001884 Ga0501035_0001884_7984_9516 480
82 3300049823 Ga0501044_0001106 Ga0501044_0001106_11451_12983 480
83 3300049571 Ga0501034_0008785 Ga0501034_0008785_4373_5902 481
84 3300053155 Ga0500620_000032 Ga0500620_000032_14008_15540 481
85 3300025230 Ga0209563_100592 Ga0209563_10059210 482
86 3300046471 Ga0495650_0001193 Ga0495650_0001193_22759_24291 482
87 3300048924 Ga0496121_0000891 Ga0496121_0000891_37910_39442 482
88 3300005435 Ga0070714_100066755 Ga0070714_1000667552 483
89 3300049573 Ga0501037_0072077 Ga0501037_0072077_43_1572 484
90 3300048920 Ga0496117_0053915 Ga0496117_0053915_491_2032 485
91 3300003760 Ga0055527_1000012 Ga0055527_1000012274 486
92 3300003762 Ga0055542_1000017 Ga0055542_1000017274 486
93 3300003763 Ga0055529_1000023 Ga0055529_1000023241 486
94 3300025228 Ga0209672_100003 Ga0209672_10000372 486
95 3300025229 Ga0209147_100734 Ga0209147_10073413 486
96 3300025254 Ga0209148_1000004 Ga0209148_1000004367 486
97 3300025272 Ga0209455_1000022 Ga0209455_1000022617 486
98 3300005338 Ga0068868_100040762 Ga0068868_1000407622 487
99 3300005366 Ga0070659_100004787 Ga0070659_1000047876 487
100 3300005539 Ga0068853_100008725 Ga0068853_1000087253 487
101 3300005563 Ga0068855_100014429 Ga0068855_1000144294 487
102 3300005563 Ga0068855_100107147 Ga0068855_1001071472 487
103 3300005577 Ga0068857_100002864 Ga0068857_1000028643 487
104 3300005614 Ga0068856_100020849 Ga0068856_1000208495 487
105 3300005842 Ga0068858_100000276 Ga0068858_10000027638 487
106 3300009093 Ga0105240_10002898 Ga0105240_1000289829 487
107 3300009093 Ga0105240_10039120 Ga0105240_100391205 487
108 3300009098 Ga0105245_10020678 Ga0105245_100206786 487
109 3300009174 Ga0105241_10004538 Ga0105241_100045389 487
110 3300009177 Ga0105248_10107256 Ga0105248_101072562 487
111 3300009551 Ga0105238_10046938 Ga0105238_100469385 487
112 3300014968 Ga0157379_10009067 Ga0157379_100090675 487
113 3300025254 Ga0209148_1001063 Ga0209148_100106311 487
114 3300025911 Ga0207654_10000001 Ga0207654_100000011418 487
115 3300025913 Ga0207695_10003601 Ga0207695_1000360110 487
116 3300025932 Ga0207690_10001692 Ga0207690_100016923 487
117 3300025941 Ga0207711_10032067 Ga0207711_100320675 487
118 3300025949 Ga0207667_10000272 Ga0207667_1000027266 487
119 3300025949 Ga0207667_10012849 Ga0207667_100128494 487
120 3300025949 Ga0207667_10220472 Ga0207667_102204722 487
121 3300025986 Ga0207658_10095505 Ga0207658_100955052 487
122 3300026023 Ga0207677_10021535 Ga0207677_100215352 487
123 3300026035 Ga0207703_10000141 Ga0207703_1000014137 487
124 3300026041 Ga0207639_10008189 Ga0207639_100081892 487
125 3300026078 Ga0207702_10129983 Ga0207702_101299832 487
126 3300048922 Ga0496119_0001615 Ga0496119_0001615_22717_24249 487
127 3300048922 Ga0496119_0005816 Ga0496119_0005816_9968_11500 487
128 3300048923 Ga0496120_0000426 Ga0496120_0000426_49704_51236 487
129 3300048927 Ga0496124_0013546 Ga0496124_0013546_3246_4769 487
130 3300048929 Ga0496126_0150547 Ga0496126_0150547_68_1600 487
131 3300053093 Ga0500651_0000368 Ga0500651_0000368_23141_24673 487
132 3300003323 rootH1_10002170 rootH1_100021702 488
133 3300048925 Ga0496122_0108971 Ga0496122_0108971_40_1563 488
134 3300053139 Ga0500568_0006164 Ga0500568_0006164_2528_4060 488
135 3300037853 Ga0436364_1345748 Ga0436364_1345748_616_2169 489
136 3300044765 Ga0466970_0007695 Ga0466970_0007695_1285_2811 489
137 3300046457 Ga0495590_0000743 Ga0495590_0000743_4597_6132 489
138 3300005331 Ga0070670_100092961 Ga0070670_1000929612 490
139 3300005436 Ga0070713_100080198 Ga0070713_1000801982 490
140 3300005436 Ga0070713_100151954 Ga0070713_1001519541 490
141 3300025915 Ga0207693_10128158 Ga0207693_101281582 490
142 3300025925 Ga0207650_10083300 Ga0207650_100833002 490
143 3300025928 Ga0207700_10007208 Ga0207700_100072084 490
144 3300035117 Ga0373953_0005713 Ga0373953_0005713_128_1681 490
145 3300035119 Ga0373956_0001701 Ga0373956_0001701_848_2401 490
146 3300035120 Ga0373957_0004890 Ga0373957_0004890_2303_3856 490
147 3300046463 Ga0495653_0124922 Ga0495653_0124922_162_1715 490
148 3300046514 Ga0495618_0020216 Ga0495618_0020216_2223_3776 490
149 3300046559 Ga0495667_0002632 Ga0495667_0002632_9823_11376 490
150 3300047317 Ga0495604_0006419 Ga0495604_0006419_5858_7411 490
151 3300047322 Ga0495680_0008208 Ga0495680_0008208_6511_8064 490
152 3300047471 Ga0495684_0003810 Ga0495684_0003810_3890_5443 490
153 3300048924 Ga0496121_0037298 Ga0496121_0037298_2510_4042 490
154 iso_pu_bacteria 2808606306 2808631014 490
155 3300049579 Ga0501043_0121353 Ga0501043_0121353_327_1856 492
156 3300014326 Ga0157380_10064593 Ga0157380_100645933 493
157 3300025253 Ga0209677_101211 Ga0209677_1012118 493
158 3300041452 Ga0451793_0568863 Ga0451793_0568863_11_1546 493
159 iso_pu_bacteria 2643221679 2644446569 493
160 iso_pu_bacteria 2904501621 2904503342 493
161 iso_pu_bacteria 2908674828 2908675481 493
162 iso_pu_bacteria 2909074476 2909074539 493
163 iso_pu_bacteria 2919039151 2919041449 493
164 iso_pu_bacteria 2928500415 2928500466 493
165 3300053139 Ga0500568_0000028 Ga0500568_0000028_73392_74921 494
166 iso_pu_bacteria 2883821847 2883824124 494
167 3300049581 Ga0501047_0019548 Ga0501047_0019548_4690_6219 495
168 3300053087 Ga0500643_000072 Ga0500643_000072_66316_67851 495
169 iso_pu_bacteria 2904430863 2904432889 495
170 3300046460 Ga0495638_0033783 Ga0495638_0033783_55_1599 496
171 iso_pu_bacteria 2751185788 2753302420 496
172 iso_pu_bacteria 2919042368 2919045573 496
173 iso_pu_bacteria 2928104781 2928108227 496
174 iso_pu_bacteria 2984551494 2984554585 496
175 3300048920 Ga0496117_0001198 Ga0496117_0001198_16678_18201 498
176 3300048921 Ga0496118_0001224 Ga0496118_0001224_16675_18198 498
177 3300048922 Ga0496119_0019066 Ga0496119_0019066_3473_4996 498
178 3300048926 Ga0496123_0010364 Ga0496123_0010364_5894_7417 498
179 iso_pu_bacteria 2966924647 2966926286 498
180 iso_pu_bacteria 2808606372 2808901784 499
181 iso_pu_bacteria 2919443155 2919446482 499
182 iso_pu_bacteria 2857737099 2857738722 500
183 iso_pu_bacteria 2643221549 2643767973 501
184 iso_pu_bacteria 2643221619 2644111370 501
185 3300044683 Ga0466965_0000009 Ga0466965_0000009_99113_100642 502
186 3300049569 Ga0501032_0032994 Ga0501032_0032994_324_1853 502
187 3300049570 Ga0501033_0013752 Ga0501033_0013752_653_2182 502
188 3300049573 Ga0501037_0066498 Ga0501037_0066498_64_1593 502
189 3300049574 Ga0501038_0000302 Ga0501038_0000302_6541_8070 502
190 3300049823 Ga0501044_0046289 Ga0501044_0046289_1004_2533 502
191 3300053139 Ga0500568_0000304 Ga0500568_0000304_14094_15623 502
192 iso_pu_bacteria 2884763398 2884765115 502
193 iso_pu_bacteria 2919523602 2919524171 502
194 3300003752 Ga0055539_1000058 Ga0055539_1000058119 503
195 3300003756 Ga0055533_1000001 Ga0055533_1000001462 503
196 3300003759 Ga0055525_1000600 Ga0055525_100060012 503
197 3300025225 Ga0209566_100026 Ga0209566_100026261 503
198 3300025226 Ga0209674_100001 Ga0209674_100001463 503
199 3300025230 Ga0209563_100001 Ga0209563_100001463 503
200 3300025253 Ga0209677_100001 Ga0209677_100001463 503
201 iso_pu_bacteria 2844841374 2844842124 503
202 iso_pu_bacteria 2919055335 2919057770 503
203 iso_pu_bacteria 2928153084 2928155661 503
204 3300053080 Ga0500635_0000010 Ga0500635_0000010_28099_29751 505
205 iso_pu_bacteria 2852677369 2852680163 505
206 3300048905 Ga0496102_0065688 Ga0496102_0065688_1691_3232 506
207 3300048920 Ga0496117_0010667 Ga0496117_0010667_2334_3875 506
208 3300048921 Ga0496118_0011502 Ga0496118_0011502_2387_3928 506
209 3300001990 JGI24737J22298_10019564 JGI24737J22298_100195643 507
210 3300002067 JGI24735J21928_10005854 JGI24735J21928_100058541 507
211 3300003578 Ga0006562J51391_1009081 Ga0006562J51391_10090813 507
212 3300020082 Ga0206353_11483285 Ga0206353_114832857 507
213 3300026078 Ga0207702_10105345 Ga0207702_101053452 507
214 3300037418 Ga0395900_0014994 Ga0395900_0014994_2870_4411 507
215 3300037466 Ga0395898_0000473 Ga0395898_0000473_66688_68229 507
216 3300048907 Ga0496104_0127080 Ga0496104_0127080_619_2160 507
217 3300048910 Ga0496107_0017283 Ga0496107_0017283_299_1840 507
218 3300048920 Ga0496117_0047902 Ga0496117_0047902_168_1709 507
219 3300048925 Ga0496122_0092662 Ga0496122_0092662_182_1723 507
220 3300048929 Ga0496126_0096083 Ga0496126_0096083_208_1749 507
221 3300049586 Ga0501070_0018390 Ga0501070_0018390_1157_2698 507
222 3300049822 Ga0501035_0014765 Ga0501035_0014765_3602_5143 507

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01078

Mg_chelatase

Magnesium chelatase, subunit ChlI

198

405

0.98

PF13541

ChlI

Subunit ChlI of Mg-chelatase

21

143

0.98

PF13335

Mg_chelatase_C

Magnesium chelatase, subunit ChlI C-terminal

449

546

0.95

PF00493

MCM

MCM P-loop domain

277

404

0.82

PF05362

Lon_C

Lon protease (S16) C-terminal proteolytic domain

4

162

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6on2-assembly1.cif.gz_D lon protease from yersinia pestis with y2853 substrate 0.8501 5 168
5lkq-assembly1.cif.gz_B protease domain of rada 0.8284 2 168
7sxo-assembly1.cif.gz_A yeast lon (pim1) with endogenous substrate 0.8268 5 164
5lkm-assembly1.cif.gz_B-2 rada bound to dtdp 0.8265 5 168
6v11-assembly1.cif.gz_F lon protease from yersinia pestis 0.8263 2 168
ID Description Score Start End Superfamily
af_P9WPR1_2_172_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9424 2 162 3.30.230.10
af_P22787_5_170_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9353 6 167 3.30.230.10
af_P9WPR1_187_501_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9255 191 502 3.40.50.300
af_P9WPR1_187_501_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9112 191 502 3.40.50.300
af_P22787_5_170_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9031 6 167 3.30.230.10
ID Description Score Start End GO Terms
AF-U2RKS2-F1-model_v4 Putative Mg chelatase-like protein 0.9739 113 448 GO:0003677
GO:0005524
GO:0016887
GO:0032508
AF-A0A841AIY2-F1-model_v4 Magnesium chelatase family protein 0.9672 1 507 GO:0005524
GO:0016887
AF-Q6AEA9-F1-model_v4 Competence protein M 0.9658 1 504 GO:0003677
GO:0005524
GO:0016887
GO:0032508
AF-A0A841AIY2-F1-model_v4 Magnesium chelatase family protein 0.9653 1 507 GO:0005524
GO:0016887
AF-Q7V5G3-F1-model_v4 Competence protein ComM 0.9651 50 167

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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