F334690
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 222 | 156 | 444 | 335 |
Family's Representative Sequence
| Representative Sequence | 3300038443|Ga0395901_0134422|Ga0395901_0134422_765_1895 |
| Length | 376 |
| Sequence | VIDLVTRTQPDPRPATAPGHDAIVIGASAGGVDAVMALAAGLPARLPAAVFVVIHMSATAPGLLSGLVDRAGPLPAGYAQDGAEVLPGRIYLAPVDHHLLIERDGPRRRMRVWRGPKENGFRPAIDPLFRSAARAYGRRAVGVILSGYLDDGTLGLMLIKRRGGVAVVQDPRTAACPDMPRAAVENVDCDYVVPLEAMPQLFARLASEPPSPVTSQTGGVLAMTADIHSGAEDGPVEMTPNTIERKQARDGPPSALTCPECGGALWEQRVDTVLRYSCHVGHGYTGESLEEQYVREVEAALWSAMRHLVESAELHRRLAARMRESGPADRAADYEQRATETEHRAAVIRDLLVKDRVGGLIGRRHEPGVSRPTDPA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 2 | 3300002987 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB | Metagenome | Endosphere |
| 3 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 4 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 5 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 6 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 7 | 3300004625 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 | Metagenome | Endosphere |
| 8 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 9 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 18 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 20 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 21 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 22 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 33 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 34 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 35 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 36 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 37 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 38 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 39 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 50 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 51 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 52 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 53 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 54 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 55 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 56 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 57 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 58 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 59 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 60 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 61 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 62 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 63 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 64 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 65 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 66 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 67 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047446 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 119 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300049515 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought | Metagenome | Rhizosphere |
| 121 | 3300049522 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control | Metagenome | Rhizosphere |
| 122 | 3300049652 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought | Metagenome | Rhizosphere |
| 123 | 3300049667 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control | Metagenome | Rhizosphere |
| 124 | 3300049668 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought | Metagenome | Rhizosphere |
| 125 | 3300049669 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought | Metagenome | Rhizosphere |
| 126 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 127 | 3300049690 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought | Metagenome | Rhizosphere |
| 128 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 129 | 3300049707 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought | Metagenome | Rhizosphere |
| 130 | 3300049708 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control | Metagenome | Rhizosphere |
| 131 | 3300049775 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought | Metagenome | Rhizosphere |
| 132 | 2738541280 | Massilia sp. GV090 | Isolate | Unclassified |
| 133 | 2738541300 | Massilia sp. GV016 | Isolate | Unclassified |
| 134 | 2738543018 | Massilia sp. GV045 | Isolate | Unclassified |
| 135 | 2738543030 | Massilia sp. GV097 | Isolate | Unclassified |
| 136 | 2808606418 | Herbaspirillum sp. SJZ107 | Isolate | Rhizosphere |
| 137 | 2856320880 | Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 | Isolate | Nodule |
| 138 | 2857558681 | Duganella sp. R-74565 | Isolate | Unclassified |
| 139 | 2869278585 | Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 | Isolate | Nodule |
| 140 | 2874139085 | Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 | Isolate | Nodule |
| 141 | 2878738818 | Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 | Isolate | Nodule |
| 142 | 2924718760 | Mesorhizobium sp. M8A.F.Ca.ET.023.01.1.1 | Isolate | Nodule |
| 143 | 2924776078 | Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 | Isolate | Nodule |
| 144 | 2937877337 | Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 | Isolate | Nodule |
| 145 | 2937972304 | Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 | Isolate | Nodule |
| 146 | 2958034702 | Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 | Isolate | Nodule |
| 147 | 2958041894 | Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 | Isolate | Nodule |
| 148 | 2958084443 | Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 | Isolate | Nodule |
| 149 | 2958092219 | Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 | Isolate | Nodule |
| 150 | 2958144490 | Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 | Isolate | Nodule |
| 151 | 2968016561 | Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 | Isolate | Nodule |
| 152 | 2970469710 | Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 | Isolate | Nodule |
| 153 | 2970593180 | Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 | Isolate | Nodule |
| 154 | 2996348954 | Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 | Isolate | Nodule |
| 155 | 3004275668 | Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 | Isolate | Nodule |
| 156 | 3004289098 | Mesorhizobium sp. M8A.F.Ca.ET.023.02.2.1 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 88.74 |
| Metatranscriptomes | 0 |
| Isolates | 11.26 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.31 |
| Nodule | 8.56 |
| Rhizoplane | 0.45 |
| Rhizosphere | 81.08 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 8.11 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0395901_0134422 | 3300038443 | Bacteria | 2599 |
| 2 | JGI25159J45721_1005846 | 3300002987 | Bacteria | 3795 |
| 3 | JGI25406J46586_10000606 | 3300003203 | Bacteria | 16890 |
| 4 | JGI25406J46586_10016175 | 3300003203 | Bacteria | 3118 |
| 5 | Ga0055526_1000418 | 3300003771 | Bacteria | 34250 |
| 6 | Ga0055524_1001410 | 3300003775 | Bacteria | 13833 |
| 7 | Ga0055528_1000174 | 3300003790 | Bacteria | 54435 |
| 8 | Ga0055543_1010210 | 3300004625 | Bacteria | 1979 |
| 9 | Ga0065165_1000612 | 3300005262 | Bacteria | 51854 |
| 10 | Ga0065165_1002874 | 3300005262 | Bacteria | 13269 |
| 11 | Ga0070658_10058584 | 3300005327 | Bacteria | 3135 |
| 12 | Ga0070658_10117341 | 3300005327 | Bacteria | 2209 |
| 13 | Ga0070683_100060959 | 3300005329 | Unclassified | 3507 |
| 14 | Ga0070661_100100479 | 3300005344 | Bacteria | 2150 |
| 15 | Ga0070659_100183340 | 3300005366 | Bacteria | 1718 |
| 16 | Ga0070700_100072056 | 3300005441 | Unclassified | 2207 |
| 17 | Ga0070684_100006667 | 3300005535 | Bacteria | 8949 |
| 18 | Ga0070672_100052193 | 3300005543 | Bacteria | 3192 |
| 19 | Ga0070693_100157565 | 3300005547 | Bacteria | 1443 |
| 20 | Ga0068855_100003405 | 3300005563 | Bacteria | 19474 |
| 21 | Ga0068855_100020787 | 3300005563 | Bacteria | 7871 |
| 22 | Ga0070664_100048624 | 3300005564 | Bacteria | 3584 |
| 23 | Ga0068852_100000017 | 3300005616 | Bacteria | 132313 |
| 24 | Ga0068852_100224030 | 3300005616 | Bacteria | 1790 |
| 25 | Ga0068864_100458028 | 3300005618 | Bacteria | 1221 |
| 26 | Ga0081539_10000053 | 3300005985 | Bacteria | 264549 |
| 27 | Ga0081539_10004684 | 3300005985 | Bacteria | 14845 |
| 28 | Ga0081539_10010158 | 3300005985 | Bacteria | 7717 |
| 29 | Ga0081539_10025151 | 3300005985 | Unclassified | 3843 |
| 30 | Ga0105244_10027525 | 3300009036 | Bacteria | 3062 |
| 31 | Ga0105250_10076057 | 3300009092 | Bacteria | 1358 |
| 32 | Ga0105240_10023605 | 3300009093 | Bacteria | 8126 |
| 33 | Ga0105241_10016735 | 3300009174 | Bacteria | 5381 |
| 34 | Ga0157373_10126489 | 3300013100 | Bacteria | 1797 |
| 35 | Ga0157370_10000001 | 3300013104 | Bacteria | 529517 |
| 36 | Ga0157369_10007379 | 3300013105 | Bacteria | 12653 |
| 37 | Ga0157374_10028065 | 3300013296 | Bacteria | 5083 |
| 38 | Ga0157372_10003834 | 3300013307 | Bacteria | 16163 |
| 39 | Ga0157376_10629318 | 3300014969 | Unclassified | 1071 |
| 40 | Ga0213875_10043852 | 3300021388 | Unclassified | 2100 |
| 41 | Ga0209565_1000017 | 3300025263 | Bacteria | 462438 |
| 42 | Ga0209673_1000007 | 3300025273 | Bacteria | 634477 |
| 43 | Ga0209130_1000078 | 3300025284 | Bacteria | 169374 |
| 44 | Ga0209675_1000009 | 3300025291 | Bacteria | 562872 |
| 45 | Ga0209564_1000036 | 3300025295 | Bacteria | 423455 |
| 46 | Ga0209564_1000055 | 3300025295 | Bacteria | 343782 |
| 47 | Ga0209256_1000167 | 3300025299 | Bacteria | 133419 |
| 48 | Ga0207653_10000974 | 3300025885 | Bacteria | 9453 |
| 49 | Ga0207705_10010481 | 3300025909 | Bacteria | 6740 |
| 50 | Ga0207654_10007170 | 3300025911 | Bacteria | 5614 |
| 51 | Ga0207695_10017322 | 3300025913 | Bacteria | 8388 |
| 52 | Ga0207649_10087853 | 3300025920 | Bacteria | 2029 |
| 53 | Ga0207661_10068173 | 3300025944 | Unclassified | 2896 |
| 54 | Ga0207679_10106401 | 3300025945 | Bacteria | 2205 |
| 55 | Ga0207679_10398249 | 3300025945 | Bacteria | 1210 |
| 56 | Ga0207667_10003589 | 3300025949 | Bacteria | 19169 |
| 57 | Ga0207667_10087200 | 3300025949 | Bacteria | 3229 |
| 58 | Ga0207708_10063657 | 3300026075 | Bacteria | 2817 |
| 59 | Ga0207698_10000050 | 3300026142 | Bacteria | 88275 |
| 60 | Ga0207698_10128302 | 3300026142 | Bacteria | 2162 |
| 61 | Ga0307410_10017653 | 3300031852 | Unclassified | 4292 |
| 62 | Ga0307410_10204697 | 3300031852 | Bacteria | 1509 |
| 63 | Ga0307406_10018301 | 3300031901 | Bacteria | 4091 |
| 64 | Ga0307409_100014802 | 3300031995 | Bacteria | 5091 |
| 65 | Ga0307416_100026994 | 3300032002 | Unclassified | 4243 |
| 66 | Ga0307414_10065029 | 3300032004 | Bacteria | 2600 |
| 67 | Ga0307414_10148993 | 3300032004 | Bacteria | 1843 |
| 68 | Ga0307415_100044477 | 3300032126 | Unclassified | 2969 |
| 69 | Ga0436364_0832385 | 3300037853 | Bacteria | 4410 |
| 70 | Ga0436364_1235847 | 3300037853 | Bacteria | 4790 |
| 71 | Ga0439448_0024178 | 3300042005 | Bacteria | 1899 |
| 72 | Ga0466965_0004253 | 3300044683 | Bacteria | 6366 |
| 73 | Ga0466966_0013845 | 3300044684 | Bacteria | 5338 |
| 74 | Ga0466966_0033930 | 3300044684 | Bacteria | 3302 |
| 75 | Ga0466963_0064459 | 3300044694 | Bacteria | 2455 |
| 76 | Ga0466963_0113706 | 3300044694 | Bacteria | 1859 |
| 77 | Ga0466964_0030748 | 3300044706 | Bacteria | 2126 |
| 78 | Ga0466970_0091531 | 3300044765 | Bacteria | 1651 |
| 79 | Ga0466957_0001994 | 3300044842 | Bacteria | 10865 |
| 80 | Ga0466957_0049245 | 3300044842 | Bacteria | 2562 |
| 81 | Ga0466957_0099950 | 3300044842 | Bacteria | 1827 |
| 82 | Ga0466960_0090185 | 3300044901 | Unclassified | 1561 |
| 83 | Ga0466959_0019104 | 3300045049 | Bacteria | 5037 |
| 84 | Ga0466958_0010773 | 3300045836 | Bacteria | 5129 |
| 85 | Ga0466958_0038057 | 3300045836 | Bacteria | 2885 |
| 86 | Ga0466967_0006803 | 3300045976 | Bacteria | 8150 |
| 87 | Ga0466967_0016828 | 3300045976 | Bacteria | 5781 |
| 88 | Ga0466967_0039020 | 3300045976 | Bacteria | 4079 |
| 89 | Ga0466967_0314592 | 3300045976 | Bacteria | 1509 |
| 90 | Ga0495627_053728 | 3300046453 | Bacteria | 1205 |
| 91 | Ga0495629_0068529 | 3300046459 | Bacteria | 2476 |
| 92 | Ga0495638_0000017 | 3300046460 | Bacteria | 391117 |
| 93 | Ga0495650_0000124 | 3300046471 | Bacteria | 180310 |
| 94 | Ga0495650_0002527 | 3300046471 | Bacteria | 14627 |
| 95 | Ga0495605_0002493 | 3300046474 | Bacteria | 11384 |
| 96 | Ga0495605_0022852 | 3300046474 | Bacteria | 3295 |
| 97 | Ga0495605_0130618 | 3300046474 | Unclassified | 1133 |
| 98 | Ga0495584_0002693 | 3300046491 | Bacteria | 9988 |
| 99 | Ga0495584_0006391 | 3300046491 | Bacteria | 6173 |
| 100 | Ga0495584_0031612 | 3300046491 | Bacteria | 2679 |
| 101 | Ga0495584_0091667 | 3300046491 | Bacteria | 1532 |
| 102 | Ga0495585_0000255 | 3300046492 | Bacteria | 54956 |
| 103 | Ga0495585_0017441 | 3300046492 | Bacteria | 4147 |
| 104 | Ga0495585_0112868 | 3300046492 | Bacteria | 1443 |
| 105 | Ga0495594_0020714 | 3300046499 | Bacteria | 3504 |
| 106 | Ga0495594_0028990 | 3300046499 | Bacteria | 2989 |
| 107 | Ga0495596_0023735 | 3300046500 | Bacteria | 2487 |
| 108 | Ga0495596_0047392 | 3300046500 | Bacteria | 1686 |
| 109 | Ga0495607_0029912 | 3300046501 | Bacteria | 3350 |
| 110 | Ga0495607_0099108 | 3300046501 | Bacteria | 1564 |
| 111 | Ga0495583_0000098 | 3300046506 | Bacteria | 148776 |
| 112 | Ga0495583_0000186 | 3300046506 | Bacteria | 105198 |
| 113 | Ga0495606_0009593 | 3300046507 | Bacteria | 8159 |
| 114 | Ga0495606_0026202 | 3300046507 | Bacteria | 4158 |
| 115 | Ga0495606_0059287 | 3300046507 | Bacteria | 2456 |
| 116 | Ga0495610_0005445 | 3300046512 | Bacteria | 9039 |
| 117 | Ga0495616_0011006 | 3300046513 | Bacteria | 5203 |
| 118 | Ga0495631_0000569 | 3300046518 | Bacteria | 24781 |
| 119 | Ga0495631_0010559 | 3300046518 | Bacteria | 4567 |
| 120 | Ga0495631_0010935 | 3300046518 | Bacteria | 4479 |
| 121 | Ga0495631_0070135 | 3300046518 | Bacteria | 1515 |
| 122 | Ga0495631_0085824 | 3300046518 | Unclassified | 1356 |
| 123 | Ga0495632_0001932 | 3300046519 | Bacteria | 16552 |
| 124 | Ga0495632_0006617 | 3300046519 | Bacteria | 7414 |
| 125 | Ga0495643_0079783 | 3300046522 | Bacteria | 1705 |
| 126 | Ga0495644_0007403 | 3300046523 | Bacteria | 4234 |
| 127 | Ga0495644_0015265 | 3300046523 | Bacteria | 2941 |
| 128 | Ga0495648_0000001 | 3300046524 | Bacteria | 696872 |
| 129 | Ga0495648_0013347 | 3300046524 | Bacteria | 6081 |
| 130 | Ga0495666_0004398 | 3300046526 | Bacteria | 7122 |
| 131 | Ga0495642_0004207 | 3300046528 | Bacteria | 5601 |
| 132 | Ga0495642_0008719 | 3300046528 | Bacteria | 3874 |
| 133 | Ga0495665_0069234 | 3300046531 | Bacteria | 1860 |
| 134 | Ga0495640_0069226 | 3300046533 | Bacteria | 2374 |
| 135 | Ga0495586_0009658 | 3300046535 | Bacteria | 5137 |
| 136 | Ga0495609_0009488 | 3300046538 | Bacteria | 4707 |
| 137 | Ga0495609_0016329 | 3300046538 | Bacteria | 3459 |
| 138 | Ga0495597_0030596 | 3300046542 | Bacteria | 2453 |
| 139 | Ga0495633_0000248 | 3300046558 | Bacteria | 64518 |
| 140 | Ga0495633_0003580 | 3300046558 | Bacteria | 10275 |
| 141 | Ga0495611_0000773 | 3300046648 | Bacteria | 17861 |
| 142 | Ga0495611_0013151 | 3300046648 | Bacteria | 3520 |
| 143 | Ga0495611_0015152 | 3300046648 | Bacteria | 3295 |
| 144 | Ga0495625_0000065 | 3300046660 | Bacteria | 173230 |
| 145 | Ga0495625_0023285 | 3300046660 | Bacteria | 4733 |
| 146 | Ga0495625_0025720 | 3300046660 | Bacteria | 4459 |
| 147 | Ga0495625_0148224 | 3300046660 | Bacteria | 1579 |
| 148 | Ga0495635_0006366 | 3300046663 | Bacteria | 8224 |
| 149 | Ga0495659_0000001 | 3300046664 | Bacteria | 325846 |
| 150 | Ga0495661_0000974 | 3300046665 | Bacteria | 25862 |
| 151 | Ga0495661_0075558 | 3300046665 | Unclassified | 1958 |
| 152 | Ga0495661_0192693 | 3300046665 | Bacteria | 1072 |
| 153 | Ga0495588_0049184 | 3300046674 | Bacteria | 2167 |
| 154 | Ga0495669_0005440 | 3300046684 | Bacteria | 5315 |
| 155 | Ga0495613_0071742 | 3300046689 | Bacteria | 2524 |
| 156 | Ga0495670_0001237 | 3300046691 | Bacteria | 12455 |
| 157 | Ga0495670_0022797 | 3300046691 | Bacteria | 3092 |
| 158 | Ga0495671_0000035 | 3300046692 | Bacteria | 188543 |
| 159 | Ga0495649_0001617 | 3300046694 | Bacteria | 16769 |
| 160 | Ga0495649_0001735 | 3300046694 | Bacteria | 16090 |
| 161 | Ga0495649_0138922 | 3300046694 | Unclassified | 1280 |
| 162 | Ga0495589_0010373 | 3300046794 | Bacteria | 4839 |
| 163 | Ga0495589_0014317 | 3300046794 | Bacteria | 4086 |
| 164 | Ga0495660_0001314 | 3300046810 | Bacteria | 17188 |
| 165 | Ga0495604_0077029 | 3300047317 | Bacteria | 2507 |
| 166 | Ga0495672_0000066 | 3300047320 | Bacteria | 193318 |
| 167 | Ga0495672_0001659 | 3300047320 | Bacteria | 21644 |
| 168 | Ga0495676_0115106 | 3300047321 | Bacteria | 1966 |
| 169 | Ga0495680_0016713 | 3300047322 | Bacteria | 6294 |
| 170 | Ga0495683_0022782 | 3300047323 | Bacteria | 3220 |
| 171 | Ga0495675_0001050 | 3300047444 | Bacteria | 16778 |
| 172 | Ga0495677_0000152 | 3300047445 | Bacteria | 32933 |
| 173 | Ga0495677_0005670 | 3300047445 | Bacteria | 4731 |
| 174 | Ga0495677_0016300 | 3300047445 | Bacteria | 2696 |
| 175 | Ga0495679_002193 | 3300047446 | Bacteria | 10211 |
| 176 | Ga0495681_0003838 | 3300047470 | Bacteria | 10399 |
| 177 | Ga0495681_0038905 | 3300047470 | Bacteria | 2327 |
| 178 | Ga0495593_0113380 | 3300047673 | Unclassified | 1383 |
| 179 | Ga0495626_0005095 | 3300048091 | Bacteria | 7830 |
| 180 | Ga0495626_0013184 | 3300048091 | Bacteria | 4305 |
| 181 | Ga0495626_0014755 | 3300048091 | Bacteria | 4017 |
| 182 | Ga0495626_0026088 | 3300048091 | Bacteria | 2851 |
| 183 | Ga0496112_0327550 | 3300048915 | Bacteria | 1476 |
| 184 | Ga0495678_004255 | 3300049459 | Bacteria | 8375 |
| 185 | Ga0495678_007613 | 3300049459 | Bacteria | 5590 |
| 186 | Ga0501292_004893 | 3300049515 | Bacteria | 1850 |
| 187 | Ga0501299_003926 | 3300049522 | Bacteria | 2188 |
| 188 | Ga0501202_004802 | 3300049652 | Bacteria | 2376 |
| 189 | Ga0501230_006613 | 3300049667 | Bacteria | 1688 |
| 190 | Ga0501233_002493 | 3300049668 | Viruses | 3252 |
| 191 | Ga0501235_008453 | 3300049669 | Unclassified | 2247 |
| 192 | Ga0501257_014510 | 3300049686 | Bacteria | 1813 |
| 193 | Ga0501261_007995 | 3300049690 | Bacteria | 1361 |
| 194 | Ga0501225_0025321 | 3300049705 | Unclassified | 1632 |
| 195 | Ga0501234_002976 | 3300049707 | Bacteria | 2661 |
| 196 | Ga0501245_001910 | 3300049708 | Bacteria | 2746 |
| 197 | Ga0501279_005525 | 3300049775 | Unclassified | 1662 |
| 198 | 2738739968 | 2738541280 | Bacteria | 6630198 |
| 199 | 2738844279 | 2738541300 | Bacteria | 6675882 |
| 200 | 2739274161 | 2738543018 | Bacteria | 6718814 |
| 201 | 2739343205 | 2738543030 | Bacteria | 6719714 |
| 202 | 2809146702 | 2808606418 | Bacteria | 6724496 |
| 203 | 2856327058 | 2856320880 | Bacteria | 7263508 |
| 204 | 2857559281 | 2857558681 | Bacteria | 6617694 |
| 205 | 2869283395 | 2869278585 | Bacteria | 7077053 |
| 206 | 2874143912 | 2874139085 | Bacteria | 7021506 |
| 207 | 2878744911 | 2878738818 | Bacteria | 7136951 |
| 208 | 2924719049 | 2924718760 | Bacteria | 6331356 |
| 209 | 2924783048 | 2924776078 | Bacteria | 7492003 |
| 210 | 2937884006 | 2937877337 | Bacteria | 7246526 |
| 211 | 2937975807 | 2937972304 | Bacteria | 7532020 |
| 212 | 2958039908 | 2958034702 | Bacteria | 6989922 |
| 213 | 2958054252 | 2958041894 | Bacteria | 13082850 |
| 214 | 2958091317 | 2958084443 | Bacteria | 7312792 |
| 215 | 2958095417 | 2958092219 | Bacteria | 6861151 |
| 216 | 2958151849 | 2958144490 | Bacteria | 6677056 |
| 217 | 2968018756 | 2968016561 | Bacteria | 7022047 |
| 218 | 2970471071 | 2970469710 | Bacteria | 6969209 |
| 219 | 2970598179 | 2970593180 | Bacteria | 7073582 |
| 220 | 2996349329 | 2996348954 | Bacteria | 7239054 |
| 221 | 3004276041 | 3004275668 | Bacteria | 7114440 |
| 222 | 3004289488 | 3004289098 | Bacteria | 6135450 |
| 223 | Ga0395901_0134422 | |||
| 224 | JGI25159J45721_1005846 | |||
| 225 | JGI25406J46586_10000606 | |||
| 226 | JGI25406J46586_10016175 | |||
| 227 | Ga0055526_1000418 | |||
| 228 | Ga0055524_1001410 | |||
| 229 | Ga0055528_1000174 | |||
| 230 | Ga0055543_1010210 | |||
| 231 | Ga0065165_1000612 | |||
| 232 | Ga0065165_1002874 | |||
| 233 | Ga0070658_10058584 | |||
| 234 | Ga0070658_10117341 | |||
| 235 | Ga0070683_100060959 | |||
| 236 | Ga0070661_100100479 | |||
| 237 | Ga0070659_100183340 | |||
| 238 | Ga0070700_100072056 | |||
| 239 | Ga0070684_100006667 | |||
| 240 | Ga0070672_100052193 | |||
| 241 | Ga0070693_100157565 | |||
| 242 | Ga0068855_100003405 | |||
| 243 | Ga0068855_100020787 | |||
| 244 | Ga0070664_100048624 | |||
| 245 | Ga0068852_100000017 | |||
| 246 | Ga0068852_100224030 | |||
| 247 | Ga0068864_100458028 | |||
| 248 | Ga0081539_10000053 | |||
| 249 | Ga0081539_10004684 | |||
| 250 | Ga0081539_10010158 | |||
| 251 | Ga0081539_10025151 | |||
| 252 | Ga0105244_10027525 | |||
| 253 | Ga0105250_10076057 | |||
| 254 | Ga0105240_10023605 | |||
| 255 | Ga0105241_10016735 | |||
| 256 | Ga0157373_10126489 | |||
| 257 | Ga0157370_10000001 | |||
| 258 | Ga0157369_10007379 | |||
| 259 | Ga0157374_10028065 | |||
| 260 | Ga0157372_10003834 | |||
| 261 | Ga0157376_10629318 | |||
| 262 | Ga0213875_10043852 | |||
| 263 | Ga0209565_1000017 | |||
| 264 | Ga0209673_1000007 | |||
| 265 | Ga0209130_1000078 | |||
| 266 | Ga0209675_1000009 | |||
| 267 | Ga0209564_1000036 | |||
| 268 | Ga0209564_1000055 | |||
| 269 | Ga0209256_1000167 | |||
| 270 | Ga0207653_10000974 | |||
| 271 | Ga0207705_10010481 | |||
| 272 | Ga0207654_10007170 | |||
| 273 | Ga0207695_10017322 | |||
| 274 | Ga0207649_10087853 | |||
| 275 | Ga0207661_10068173 | |||
| 276 | Ga0207679_10106401 | |||
| 277 | Ga0207679_10398249 | |||
| 278 | Ga0207667_10003589 | |||
| 279 | Ga0207667_10087200 | |||
| 280 | Ga0207708_10063657 | |||
| 281 | Ga0207698_10000050 | |||
| 282 | Ga0207698_10128302 | |||
| 283 | Ga0307410_10017653 | |||
| 284 | Ga0307410_10204697 | |||
| 285 | Ga0307406_10018301 | |||
| 286 | Ga0307409_100014802 | |||
| 287 | Ga0307416_100026994 | |||
| 288 | Ga0307414_10065029 | |||
| 289 | Ga0307414_10148993 | |||
| 290 | Ga0307415_100044477 | |||
| 291 | Ga0436364_0832385 | |||
| 292 | Ga0436364_1235847 | |||
| 293 | Ga0439448_0024178 | |||
| 294 | Ga0466965_0004253 | |||
| 295 | Ga0466966_0013845 | |||
| 296 | Ga0466966_0033930 | |||
| 297 | Ga0466963_0064459 | |||
| 298 | Ga0466963_0113706 | |||
| 299 | Ga0466964_0030748 | |||
| 300 | Ga0466970_0091531 | |||
| 301 | Ga0466957_0001994 | |||
| 302 | Ga0466957_0049245 | |||
| 303 | Ga0466957_0099950 | |||
| 304 | Ga0466960_0090185 | |||
| 305 | Ga0466959_0019104 | |||
| 306 | Ga0466958_0010773 | |||
| 307 | Ga0466958_0038057 | |||
| 308 | Ga0466967_0006803 | |||
| 309 | Ga0466967_0016828 | |||
| 310 | Ga0466967_0039020 | |||
| 311 | Ga0466967_0314592 | |||
| 312 | Ga0495627_053728 | |||
| 313 | Ga0495629_0068529 | |||
| 314 | Ga0495638_0000017 | |||
| 315 | Ga0495650_0000124 | |||
| 316 | Ga0495650_0002527 | |||
| 317 | Ga0495605_0002493 | |||
| 318 | Ga0495605_0022852 | |||
| 319 | Ga0495605_0130618 | |||
| 320 | Ga0495584_0002693 | |||
| 321 | Ga0495584_0006391 | |||
| 322 | Ga0495584_0031612 | |||
| 323 | Ga0495584_0091667 | |||
| 324 | Ga0495585_0000255 | |||
| 325 | Ga0495585_0017441 | |||
| 326 | Ga0495585_0112868 | |||
| 327 | Ga0495594_0020714 | |||
| 328 | Ga0495594_0028990 | |||
| 329 | Ga0495596_0023735 | |||
| 330 | Ga0495596_0047392 | |||
| 331 | Ga0495607_0029912 | |||
| 332 | Ga0495607_0099108 | |||
| 333 | Ga0495583_0000098 | |||
| 334 | Ga0495583_0000186 | |||
| 335 | Ga0495606_0009593 | |||
| 336 | Ga0495606_0026202 | |||
| 337 | Ga0495606_0059287 | |||
| 338 | Ga0495610_0005445 | |||
| 339 | Ga0495616_0011006 | |||
| 340 | Ga0495631_0000569 | |||
| 341 | Ga0495631_0010559 | |||
| 342 | Ga0495631_0010935 | |||
| 343 | Ga0495631_0070135 | |||
| 344 | Ga0495631_0085824 | |||
| 345 | Ga0495632_0001932 | |||
| 346 | Ga0495632_0006617 | |||
| 347 | Ga0495643_0079783 | |||
| 348 | Ga0495644_0007403 | |||
| 349 | Ga0495644_0015265 | |||
| 350 | Ga0495648_0000001 | |||
| 351 | Ga0495648_0013347 | |||
| 352 | Ga0495666_0004398 | |||
| 353 | Ga0495642_0004207 | |||
| 354 | Ga0495642_0008719 | |||
| 355 | Ga0495665_0069234 | |||
| 356 | Ga0495640_0069226 | |||
| 357 | Ga0495586_0009658 | |||
| 358 | Ga0495609_0009488 | |||
| 359 | Ga0495609_0016329 | |||
| 360 | Ga0495597_0030596 | |||
| 361 | Ga0495633_0000248 | |||
| 362 | Ga0495633_0003580 | |||
| 363 | Ga0495611_0000773 | |||
| 364 | Ga0495611_0013151 | |||
| 365 | Ga0495611_0015152 | |||
| 366 | Ga0495625_0000065 | |||
| 367 | Ga0495625_0023285 | |||
| 368 | Ga0495625_0025720 | |||
| 369 | Ga0495625_0148224 | |||
| 370 | Ga0495635_0006366 | |||
| 371 | Ga0495659_0000001 | |||
| 372 | Ga0495661_0000974 | |||
| 373 | Ga0495661_0075558 | |||
| 374 | Ga0495661_0192693 | |||
| 375 | Ga0495588_0049184 | |||
| 376 | Ga0495669_0005440 | |||
| 377 | Ga0495613_0071742 | |||
| 378 | Ga0495670_0001237 | |||
| 379 | Ga0495670_0022797 | |||
| 380 | Ga0495671_0000035 | |||
| 381 | Ga0495649_0001617 | |||
| 382 | Ga0495649_0001735 | |||
| 383 | Ga0495649_0138922 | |||
| 384 | Ga0495589_0010373 | |||
| 385 | Ga0495589_0014317 | |||
| 386 | Ga0495660_0001314 | |||
| 387 | Ga0495604_0077029 | |||
| 388 | Ga0495672_0000066 | |||
| 389 | Ga0495672_0001659 | |||
| 390 | Ga0495676_0115106 | |||
| 391 | Ga0495680_0016713 | |||
| 392 | Ga0495683_0022782 | |||
| 393 | Ga0495675_0001050 | |||
| 394 | Ga0495677_0000152 | |||
| 395 | Ga0495677_0005670 | |||
| 396 | Ga0495677_0016300 | |||
| 397 | Ga0495679_002193 | |||
| 398 | Ga0495681_0003838 | |||
| 399 | Ga0495681_0038905 | |||
| 400 | Ga0495593_0113380 | |||
| 401 | Ga0495626_0005095 | |||
| 402 | Ga0495626_0013184 | |||
| 403 | Ga0495626_0014755 | |||
| 404 | Ga0495626_0026088 | |||
| 405 | Ga0496112_0327550 | |||
| 406 | Ga0495678_004255 | |||
| 407 | Ga0495678_007613 | |||
| 408 | Ga0501292_004893 | |||
| 409 | Ga0501299_003926 | |||
| 410 | Ga0501202_004802 | |||
| 411 | Ga0501230_006613 | |||
| 412 | Ga0501233_002493 | |||
| 413 | Ga0501235_008453 | |||
| 414 | Ga0501257_014510 | |||
| 415 | Ga0501261_007995 | |||
| 416 | Ga0501225_0025321 | |||
| 417 | Ga0501234_002976 | |||
| 418 | Ga0501245_001910 | |||
| 419 | Ga0501279_005525 | |||
| 420 | 2738739968 | |||
| 421 | 2738844279 | |||
| 422 | 2739274161 | |||
| 423 | 2739343205 | |||
| 424 | 2809146702 | |||
| 425 | 2856327058 | |||
| 426 | 2857559281 | |||
| 427 | 2869283395 | |||
| 428 | 2874143912 | |||
| 429 | 2878744911 | |||
| 430 | 2924719049 | |||
| 431 | 2924783048 | |||
| 432 | 2937884006 | |||
| 433 | 2937975807 | |||
| 434 | 2958039908 | |||
| 435 | 2958054252 | |||
| 436 | 2958091317 | |||
| 437 | 2958095417 | |||
| 438 | 2958151849 | |||
| 439 | 2968018756 | |||
| 440 | 2970471071 | |||
| 441 | 2970598179 | |||
| 442 | 2996349329 | |||
| 443 | 3004276041 | |||
| 444 | 3004289488 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6ymz-assembly4.cif.gz_D | structure of the cheb methylsterase from p. atrosepticum scri1043 | 0.9723 | 36 | 179 |
| 6ymz-assembly3.cif.gz_C | structure of the cheb methylsterase from p. atrosepticum scri1043 | 0.971 | 36 | 179 |
| 2hr5-assembly1.cif.gz_A | pf1283- rubrerythrin from pyrococcus furiosus iron bound form | 0.9667 | 260 | 316 |
| 1jgc-assembly1.cif.gz_A | the 2.6 a structure resolution of rhodobacter capsulatus bacterioferritin with metal-free dinuclear site and heme iron in a crystallographic special position | 0.9588 | 258 | 316 |
| 8sqp-assembly1.cif.gz_A | crystal structure of bacterioferritin (bfr) from brucella abortus (apo, f16l mutant) | 0.9584 | 260 | 316 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3qvdE01 | Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle | 0.9698 | 260 | 316 | 1.20.1260.10 |
| 3qvdC01 | Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle | 0.9689 | 260 | 316 | 1.20.1260.10 |
| 3pwfA01 | Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle | 0.9689 | 260 | 316 | 1.20.1260.10 |
| 3pwfB01 | Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle | 0.9688 | 260 | 316 | 1.20.1260.10 |
| 3qvdD01 | Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle | 0.9687 | 260 | 316 | 1.20.1260.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7T9ICI6-F1-model_v4 | deleted | 0.9812 | 36 | 179 |
|
| AF-A0A0F9FXW1-F1-model_v4 | protein-glutamate methylesterase (EC 3.1.1.61) | 0.9794 | 35 | 181 |
GO:0000156
GO:0005737 GO:0006935 GO:0008984 |
| AF-A0A4Z0D4Q0-F1-model_v4 | Protein-glutamate methylesterase/protein-glutamine glutaminase (EC 3.1.1.61) (EC 3.5.1.44) | 0.9774 | 35 | 176 |
GO:0000156
GO:0005737 GO:0006935 GO:0008984 GO:0050568 |
| AF-A0A7C6KHG1-F1-model_v4 | deleted | 0.9771 | 35 | 178 |
|
| AF-A0A6N0DWT2-F1-model_v4 | Protein-glutamate methylesterase/protein-glutamine glutaminase (EC 3.1.1.61) (EC 3.5.1.44) | 0.9764 | 35 | 178 |
GO:0000156
GO:0005737 GO:0006935 GO:0008984 GO:0050568 |