F334480

General Info

Members Datasets Scaffolds Average Seq Length
222 157 444 162

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10106751|Ga0157375_101067512
Length 181
Sequence MNDRSPRLDTPRETRRQPLLRRRPSYNSDAFGSFAEQFARYMGTARFLMWMTAVVVIWVLWNAFAPADWKFDEFPFIFLTLALSLQASYAAPLILLAQNRQEQRDKVIAEQDRQANARGHADMEFLAREVASLRMAVGEVATRDFLRSELRTLLSELDTRDSDSERGQGHPTPPDPDNPPT

Samples

Sample ID Description Type Environment
1 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
65 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
66 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
67 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
68 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
69 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
70 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
71 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
76 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
77 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
78 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
79 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
80 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
81 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
87 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
88 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
89 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
90 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
91 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
96 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
102 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
103 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
104 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
105 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
106 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
111 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
114 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
136 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
139 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
140 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
143 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
144 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
145 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
146 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
147 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
148 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
149 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
150 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
152 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
153 2643221615 Nocardioides sp. Root224 Isolate Unclassified
154 2643221641 Nocardioides sp. Root122 Isolate Unclassified
155 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
156 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
157 2739367898 Nocardioides sp. CF479 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.85
Metatranscriptomes 0.9
Isolates 2.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.12
Nodule 0
Rhizoplane 9.01
Rhizosphere 70.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157375_10106751 3300013308 Bacteria 2892
2 JGI24737J22298_10139260 3300001990 Bacteria 717
3 JGI24735J21928_10014036 3300002067 Bacteria 2511
4 Ga0070658_10050154 3300005327 Bacteria 3383
5 Ga0070658_10928798 3300005327 Bacteria 757
6 Ga0070683_100022437 3300005329 Bacteria 5642
7 Ga0070683_100026403 3300005329 Bacteria 5228
8 Ga0070689_100235383 3300005340 Bacteria 1507
9 Ga0070700_100059073 3300005441 Bacteria 2412
10 Ga0070708_101145262 3300005445 Bacteria 728
11 Ga0070663_100023233 3300005455 Bacteria 4154
12 Ga0070681_10094821 3300005458 Bacteria 2933
13 Ga0070698_100001164 3300005471 Bacteria 29171
14 Ga0070679_100013245 3300005530 Bacteria 7893
15 Ga0070684_100669252 3300005535 Bacteria 967
16 Ga0070672_101355857 3300005543 Bacteria 636
17 Ga0070665_100001445 3300005548 Bacteria 27861
18 Ga0070665_100009591 3300005548 Bacteria 9793
19 Ga0070665_100317210 3300005548 Bacteria 1563
20 Ga0068855_100003896 3300005563 Bacteria 18224
21 Ga0068857_100943386 3300005577 Bacteria 829
22 Ga0068854_100001546 3300005578 Bacteria 13970
23 Ga0068856_100146389 3300005614 Bacteria 2370
24 Ga0068852_100423720 3300005616 Bacteria 1313
25 Ga0068852_100640320 3300005616 Bacteria 1070
26 Ga0068870_10225221 3300005840 Bacteria 1150
27 Ga0068860_100002422 3300005843 Bacteria 19585
28 Ga0075365_10090814 3300006038 Bacteria 2080
29 Ga0075365_10091341 3300006038 Bacteria 2075
30 Ga0075365_10111128 3300006038 Bacteria 1883
31 Ga0075365_10186533 3300006038 Bacteria 1451
32 Ga0075365_10330171 3300006038 Bacteria 1074
33 Ga0075365_10408132 3300006038 Bacteria 959
34 Ga0075365_10485886 3300006038 Bacteria 873
35 Ga0075368_10002300 3300006042 Bacteria 6203
36 Ga0075368_10139195 3300006042 Bacteria 1011
37 Ga0075363_100003687 3300006048 Bacteria 6583
38 Ga0075363_100158566 3300006048 Bacteria 1280
39 Ga0075364_10001771 3300006051 Bacteria 11935
40 Ga0075364_10042024 3300006051 Bacteria 2969
41 Ga0075364_10182867 3300006051 Bacteria 1419
42 Ga0075367_10043802 3300006178 Bacteria 2621
43 Ga0075367_10156850 3300006178 Bacteria 1414
44 Ga0075370_10015108 3300006353 Bacteria 4127
45 Ga0068865_100073543 3300006881 Bacteria 2431
46 Ga0068865_100180595 3300006881 Bacteria 1625
47 Ga0105240_10006076 3300009093 Bacteria 17834
48 Ga0105241_10014178 3300009174 Bacteria 5840
49 Ga0105237_10094309 3300009545 Bacteria 2982
50 Ga0105237_11378701 3300009545 Bacteria 711
51 Ga0105238_10069905 3300009551 Bacteria 3511
52 Ga0105238_10405386 3300009551 Bacteria 1357
53 Ga0105238_11933617 3300009551 Bacteria 623
54 Ga0105239_10006209 3300010375 Bacteria 13902
55 Ga0157369_10532066 3300013105 Bacteria 1215
56 Ga0163162_10554982 3300013306 Bacteria 1277
57 Ga0163162_11085034 3300013306 Bacteria 907
58 Ga0157372_11060772 3300013307 Bacteria 938
59 Ga0157372_12634832 3300013307 Bacteria 577
60 Ga0157375_11164185 3300013308 Bacteria 904
61 Ga0157380_11817505 3300014326 Bacteria 669
62 Ga0206353_10525324 3300020082 Bacteria 1269
63 Ga0224712_10013045 3300022467 Bacteria 2634
64 Ga0207680_10665963 3300025903 Bacteria 745
65 Ga0207647_10019976 3300025904 Bacteria 4497
66 Ga0207643_10183085 3300025908 Bacteria 1269
67 Ga0207654_10005197 3300025911 Bacteria 6569
68 Ga0207695_10000481 3300025913 Bacteria 85421
69 Ga0207671_10000538 3300025914 Bacteria 51154
70 Ga0207649_10591885 3300025920 Bacteria 852
71 Ga0207652_10223122 3300025921 Bacteria 1698
72 Ga0207694_10000642 3300025924 Bacteria 31537
73 Ga0207694_10406106 3300025924 Bacteria 1133
74 Ga0207704_10267109 3300025938 Bacteria 1293
75 Ga0207661_10005457 3300025944 Bacteria 8966
76 Ga0207661_10136904 3300025944 Bacteria 2104
77 Ga0207661_10504984 3300025944 Bacteria 1105
78 Ga0207667_10062981 3300025949 Bacteria 3876
79 Ga0207667_10634723 3300025949 Bacteria 1075
80 Ga0207640_10002801 3300025981 Bacteria 9350
81 Ga0207678_10031724 3300026067 Bacteria 4607
82 Ga0207708_10200880 3300026075 Bacteria 1590
83 Ga0207702_10351617 3300026078 Bacteria 1410
84 Ga0207674_10771163 3300026116 Bacteria 928
85 Ga0207675_100001638 3300026118 Bacteria 22449
86 Ga0207683_10121420 3300026121 Bacteria 2346
87 Ga0207698_10014997 3300026142 Bacteria 5174
88 Ga0209813_10004118 3300027866 Bacteria 3453
89 Ga0268266_10001767 3300028379 Bacteria 24551
90 Ga0268266_10009599 3300028379 Bacteria 8510
91 Ga0268266_10757352 3300028379 Bacteria 937
92 Ga0268264_10000552 3300028381 Bacteria 46800
93 Ga0316575_10002683 3300031665 Bacteria 6001
94 Ga0316579_10320947 3300031691 Bacteria 749
95 Ga0316576_10000409 3300031727 Bacteria 19808
96 Ga0316576_10002106 3300031727 Bacteria 11203
97 Ga0316578_10001918 3300031728 Bacteria 8790
98 Ga0316577_10018609 3300031733 Bacteria 3842
99 Ga0307413_10153862 3300031824 Bacteria 1606
100 Ga0307412_10701522 3300031911 Bacteria 869
101 Ga0307412_11084325 3300031911 Bacteria 712
102 Ga0307409_100030550 3300031995 Bacteria 3873
103 Ga0307409_100529064 3300031995 Bacteria 1153
104 Ga0307409_101964155 3300031995 Bacteria 615
105 Ga0307416_100697417 3300032002 Bacteria 1104
106 Ga0307414_10369849 3300032004 Bacteria 1236
107 Ga0307414_10711552 3300032004 Bacteria 910
108 Ga0307415_100054358 3300032126 Bacteria 2733
109 Ga0316583_10001567 3300032133 Bacteria 7701
110 Ga0316580_10002052 3300032139 Bacteria 5456
111 Ga0373944_0137918 3300035089 Bacteria 852
112 Ga0316574_0234900 3300035398 Bacteria 1172
113 Ga0373947_0451618 3300035725 Bacteria 871
114 Ga0316582_0012298 3300036647 Bacteria 4768
115 Ga0316584_0005530 3300036712 Bacteria 8492
116 Ga0373925_0495608 3300037068 Bacteria 1003
117 Ga0395900_0915512 3300037418 Bacteria 800
118 Ga0316581_0000865 3300037588 Bacteria 6373
119 Ga0436365_1331936 3300039437 Bacteria 3395
120 Ga0451791_0649677 3300041451 Bacteria 594
121 Ga0451798_0737293 3300041458 Bacteria 553
122 Ga0451806_176280 3300041462 Bacteria 852
123 Ga0451806_832492 3300041462 Bacteria 594
124 Ga0451835_0619571 3300041492 Bacteria 616
125 Ga0451847_0020313 3300041503 Bacteria 1179
126 Ga0466969_0004299 3300044656 Bacteria 7577
127 Ga0466969_0031817 3300044656 Bacteria 2684
128 Ga0466966_0301931 3300044684 Bacteria 962
129 Ga0466961_0092143 3300044693 Bacteria 1913
130 Ga0466961_0145197 3300044693 Bacteria 1484
131 Ga0466963_0190840 3300044694 Bacteria 1431
132 Ga0466963_0427116 3300044694 Bacteria 934
133 Ga0466971_0005577 3300044719 Bacteria 5468
134 Ga0466970_0070777 3300044765 Bacteria 1875
135 Ga0466957_0161882 3300044842 Bacteria 1454
136 Ga0466957_0328859 3300044842 Bacteria 1033
137 Ga0466960_0023815 3300044901 Bacteria 2754
138 Ga0466960_0255961 3300044901 Bacteria 974
139 Ga0466960_0581476 3300044901 Bacteria 663
140 Ga0466958_0025781 3300045836 Bacteria 3469
141 Ga0466958_0091539 3300045836 Bacteria 1883
142 Ga0466967_0001389 3300045976 Bacteria 13984
143 Ga0466967_0006323 3300045976 Bacteria 8363
144 Ga0466967_0113138 3300045976 Bacteria 2496
145 Ga0466967_0135759 3300045976 Bacteria 2287
146 Ga0466967_0624432 3300045976 Bacteria 1064
147 Ga0466967_0984530 3300045976 Bacteria 840
148 Ga0495603_0076169 3300046455 Bacteria 1969
149 Ga0495603_0719970 3300046455 Bacteria 570
150 Ga0495629_0379974 3300046459 Bacteria 961
151 Ga0495641_0171017 3300046461 Bacteria 972
152 Ga0495651_0000855 3300046462 Bacteria 23604
153 Ga0495651_0161304 3300046462 Bacteria 1606
154 Ga0495580_0623296 3300046472 Bacteria 711
155 Ga0495596_0162120 3300046500 Bacteria 869
156 Ga0495628_0001343 3300046516 Bacteria 22559
157 Ga0495652_0002935 3300046529 Bacteria 17163
158 Ga0495645_0155260 3300046543 Bacteria 1586
159 Ga0495622_0076103 3300046557 Bacteria 1547
160 Ga0495646_0034671 3300046680 Bacteria 3134
161 Ga0495658_0025464 3300046683 Bacteria 3162
162 Ga0495613_0487856 3300046689 Bacteria 831
163 Ga0495604_0014007 3300047317 Bacteria 6394
164 Ga0495674_0186437 3300047319 Bacteria 1726
165 Ga0496101_0521829 3300048904 Bacteria 939
166 Ga0496101_1570652 3300048904 Bacteria 511
167 Ga0496102_0777418 3300048905 Bacteria 880
168 Ga0496103_0422499 3300048906 Bacteria 856
169 Ga0496106_0298264 3300048909 Bacteria 1292
170 Ga0496106_0700387 3300048909 Bacteria 807
171 Ga0496107_0261891 3300048910 Bacteria 1287
172 Ga0496107_0409077 3300048910 Bacteria 1009
173 Ga0496108_0258913 3300048911 Bacteria 1514
174 Ga0496108_0273788 3300048911 Bacteria 1469
175 Ga0496109_0061557 3300048912 Bacteria 3432
176 Ga0496110_0481793 3300048913 Bacteria 1130
177 Ga0496110_0546923 3300048913 Bacteria 1052
178 Ga0496111_1012730 3300048914 Bacteria 595
179 Ga0496112_1396976 3300048915 Bacteria 615
180 Ga0496114_0043105 3300048917 Bacteria 3742
181 Ga0501032_0320214 3300049569 Bacteria 1001
182 Ga0501039_0174953 3300049575 Bacteria 1688
183 Ga0501040_0753065 3300049576 Bacteria 705
184 Ga0501041_0300179 3300049577 Bacteria 1012
185 Ga0501069_0551956 3300049585 Bacteria 689
186 Ga0501070_0008409 3300049586 Bacteria 8716
187 Ga0501071_0161820 3300049587 Bacteria 1673
188 Ga0501072_0165083 3300049588 Bacteria 1767
189 Ga0501074_0004110 3300049590 Bacteria 10386
190 Ga0501074_0958528 3300049590 Bacteria 602
191 Ga0501075_0727070 3300049591 Bacteria 756
192 Ga0501076_0696231 3300049592 Bacteria 839
193 nmdc:mga03683_341062_c1 3300050489 Bacteria 708
194 nmdc:mga03n38_76182_c1 3300050490 Bacteria 1564
195 nmdc:mga03n38_84872_c1 3300050490 Bacteria 1496
196 nmdc:mga00v17_355265_c1 3300050491 Bacteria 953
197 nmdc:mga00v17_518662_c1 3300050491 Bacteria 772
198 nmdc:mga00v17_64208_c1 3300050491 Bacteria 2262
199 nmdc:mga00v17_72940_c1 3300050491 Bacteria 2131
200 nmdc:mga0yw44_161726_c1 3300050492 Bacteria 1466
201 nmdc:mga0yw44_177508_c1 3300050492 Bacteria 1401
202 nmdc:mga0yw44_261631_c1 3300050492 Bacteria 1153
203 nmdc:mga0yw44_73046_c1 3300050492 Bacteria 2133
204 nmdc:mga0yw44_94143_c1 3300050492 Bacteria 1898
205 nmdc:mga06z11_13791_c1 3300050494 Bacteria 3561
206 nmdc:mga06z11_7744_c1 3300050494 Bacteria 4438
207 nmdc:mga04h51_8910_c1 3300050495 Bacteria 2699
208 nmdc:mga07m45_491039_c1 3300050496 Bacteria 711
209 nmdc:mga07m45_8376_c1 3300050496 Bacteria 5314
210 Ga0495612_0003617 3300053078 Bacteria 6412
211 Ga0495619_0057170 3300053085 Bacteria 2588
212 Ga0500593_000119 3300053117 Bacteria 30716
213 Ga0500568_0271617 3300053139 Bacteria 616
214 Ga0500573_0022514 3300053140 Bacteria 3616
215 Ga0501084_0980355 3300054114 Bacteria 710
216 Ga0501082_0792959 3300060353 Bacteria 829
217 Ga0530510_0561309 3300061734 Bacteria 867
218 2644090772 2643221615 Bacteria 5487866
219 2644231486 2643221641 Bacteria 4490190
220 2644320576 2643221657 Bacteria 5490246
221 2644456182 2643221681 Bacteria 3707866
222 2740167431 2739367898 Bacteria 4367674
223 Ga0157375_10106751
224 JGI24737J22298_10139260
225 JGI24735J21928_10014036
226 Ga0070658_10050154
227 Ga0070658_10928798
228 Ga0070683_100022437
229 Ga0070683_100026403
230 Ga0070689_100235383
231 Ga0070700_100059073
232 Ga0070708_101145262
233 Ga0070663_100023233
234 Ga0070681_10094821
235 Ga0070698_100001164
236 Ga0070679_100013245
237 Ga0070684_100669252
238 Ga0070672_101355857
239 Ga0070665_100001445
240 Ga0070665_100009591
241 Ga0070665_100317210
242 Ga0068855_100003896
243 Ga0068857_100943386
244 Ga0068854_100001546
245 Ga0068856_100146389
246 Ga0068852_100423720
247 Ga0068852_100640320
248 Ga0068870_10225221
249 Ga0068860_100002422
250 Ga0075365_10090814
251 Ga0075365_10091341
252 Ga0075365_10111128
253 Ga0075365_10186533
254 Ga0075365_10330171
255 Ga0075365_10408132
256 Ga0075365_10485886
257 Ga0075368_10002300
258 Ga0075368_10139195
259 Ga0075363_100003687
260 Ga0075363_100158566
261 Ga0075364_10001771
262 Ga0075364_10042024
263 Ga0075364_10182867
264 Ga0075367_10043802
265 Ga0075367_10156850
266 Ga0075370_10015108
267 Ga0068865_100073543
268 Ga0068865_100180595
269 Ga0105240_10006076
270 Ga0105241_10014178
271 Ga0105237_10094309
272 Ga0105237_11378701
273 Ga0105238_10069905
274 Ga0105238_10405386
275 Ga0105238_11933617
276 Ga0105239_10006209
277 Ga0157369_10532066
278 Ga0163162_10554982
279 Ga0163162_11085034
280 Ga0157372_11060772
281 Ga0157372_12634832
282 Ga0157375_11164185
283 Ga0157380_11817505
284 Ga0206353_10525324
285 Ga0224712_10013045
286 Ga0207680_10665963
287 Ga0207647_10019976
288 Ga0207643_10183085
289 Ga0207654_10005197
290 Ga0207695_10000481
291 Ga0207671_10000538
292 Ga0207649_10591885
293 Ga0207652_10223122
294 Ga0207694_10000642
295 Ga0207694_10406106
296 Ga0207704_10267109
297 Ga0207661_10005457
298 Ga0207661_10136904
299 Ga0207661_10504984
300 Ga0207667_10062981
301 Ga0207667_10634723
302 Ga0207640_10002801
303 Ga0207678_10031724
304 Ga0207708_10200880
305 Ga0207702_10351617
306 Ga0207674_10771163
307 Ga0207675_100001638
308 Ga0207683_10121420
309 Ga0207698_10014997
310 Ga0209813_10004118
311 Ga0268266_10001767
312 Ga0268266_10009599
313 Ga0268266_10757352
314 Ga0268264_10000552
315 Ga0316575_10002683
316 Ga0316579_10320947
317 Ga0316576_10000409
318 Ga0316576_10002106
319 Ga0316578_10001918
320 Ga0316577_10018609
321 Ga0307413_10153862
322 Ga0307412_10701522
323 Ga0307412_11084325
324 Ga0307409_100030550
325 Ga0307409_100529064
326 Ga0307409_101964155
327 Ga0307416_100697417
328 Ga0307414_10369849
329 Ga0307414_10711552
330 Ga0307415_100054358
331 Ga0316583_10001567
332 Ga0316580_10002052
333 Ga0373944_0137918
334 Ga0316574_0234900
335 Ga0373947_0451618
336 Ga0316582_0012298
337 Ga0316584_0005530
338 Ga0373925_0495608
339 Ga0395900_0915512
340 Ga0316581_0000865
341 Ga0436365_1331936
342 Ga0451791_0649677
343 Ga0451798_0737293
344 Ga0451806_176280
345 Ga0451806_832492
346 Ga0451835_0619571
347 Ga0451847_0020313
348 Ga0466969_0004299
349 Ga0466969_0031817
350 Ga0466966_0301931
351 Ga0466961_0092143
352 Ga0466961_0145197
353 Ga0466963_0190840
354 Ga0466963_0427116
355 Ga0466971_0005577
356 Ga0466970_0070777
357 Ga0466957_0161882
358 Ga0466957_0328859
359 Ga0466960_0023815
360 Ga0466960_0255961
361 Ga0466960_0581476
362 Ga0466958_0025781
363 Ga0466958_0091539
364 Ga0466967_0001389
365 Ga0466967_0006323
366 Ga0466967_0113138
367 Ga0466967_0135759
368 Ga0466967_0624432
369 Ga0466967_0984530
370 Ga0495603_0076169
371 Ga0495603_0719970
372 Ga0495629_0379974
373 Ga0495641_0171017
374 Ga0495651_0000855
375 Ga0495651_0161304
376 Ga0495580_0623296
377 Ga0495596_0162120
378 Ga0495628_0001343
379 Ga0495652_0002935
380 Ga0495645_0155260
381 Ga0495622_0076103
382 Ga0495646_0034671
383 Ga0495658_0025464
384 Ga0495613_0487856
385 Ga0495604_0014007
386 Ga0495674_0186437
387 Ga0496101_0521829
388 Ga0496101_1570652
389 Ga0496102_0777418
390 Ga0496103_0422499
391 Ga0496106_0298264
392 Ga0496106_0700387
393 Ga0496107_0261891
394 Ga0496107_0409077
395 Ga0496108_0258913
396 Ga0496108_0273788
397 Ga0496109_0061557
398 Ga0496110_0481793
399 Ga0496110_0546923
400 Ga0496111_1012730
401 Ga0496112_1396976
402 Ga0496114_0043105
403 Ga0501032_0320214
404 Ga0501039_0174953
405 Ga0501040_0753065
406 Ga0501041_0300179
407 Ga0501069_0551956
408 Ga0501070_0008409
409 Ga0501071_0161820
410 Ga0501072_0165083
411 Ga0501074_0004110
412 Ga0501074_0958528
413 Ga0501075_0727070
414 Ga0501076_0696231
415 nmdc:mga03683_341062_c1
416 nmdc:mga03n38_76182_c1
417 nmdc:mga03n38_84872_c1
418 nmdc:mga00v17_355265_c1
419 nmdc:mga00v17_518662_c1
420 nmdc:mga00v17_64208_c1
421 nmdc:mga00v17_72940_c1
422 nmdc:mga0yw44_161726_c1
423 nmdc:mga0yw44_177508_c1
424 nmdc:mga0yw44_261631_c1
425 nmdc:mga0yw44_73046_c1
426 nmdc:mga0yw44_94143_c1
427 nmdc:mga06z11_13791_c1
428 nmdc:mga06z11_7744_c1
429 nmdc:mga04h51_8910_c1
430 nmdc:mga07m45_491039_c1
431 nmdc:mga07m45_8376_c1
432 Ga0495612_0003617
433 Ga0495619_0057170
434 Ga0500593_000119
435 Ga0500568_0271617
436 Ga0500573_0022514
437 Ga0501084_0980355
438 Ga0501082_0792959
439 Ga0530510_0561309
440 2644090772
441 2644231486
442 2644320576
443 2644456182
444 2740167431

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06210

DUF1003

Protein of unknown function (DUF1003)

42

144

0.98

Map