F333897

General Info

Members Datasets Scaffolds Average Seq Length
221 157 202 231

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0005548|Ga0500616_0005548_2118_2885
Length 255
Sequence LKKYFLLRALNLAEGIFAGKRINNIMAKEKAGIPSSSFEFLNALKENNNRDWFNANKTVFQKEQQFIETFAEQLLQELNKHDQMETPSGKNSLHRIYRDTRFSKDKTPYKVNWSGSFKRATKYRRGGCYFHLEPGNSFVAGGFWAPSTQDLKRMRDDIAFDPAPLRKIISSKSFTTTFGTLEGEQLKTTPKGFEATHEAIDLLRYKQFLLIKRFTDKEVLSEHFLKEANQAFKNMRPFFDYMSEVLTTDVNGLAV

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
3 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
4 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
5 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
6 2738543023 Pedobacter sp. OK628 Isolate Unclassified
7 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
8 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
9 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
10 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
11 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
12 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
13 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
14 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
15 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
16 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
17 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
18 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
19 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
20 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
21 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
22 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
23 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
24 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
27 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
28 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
29 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
30 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
31 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
32 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
33 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
34 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
35 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
36 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
37 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
38 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
39 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
40 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
41 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
72 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
73 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
74 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
75 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
76 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
77 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
78 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
80 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
84 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
86 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
105 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
106 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
107 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
108 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
109 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
115 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
116 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
117 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
118 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
119 3300042128 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 Metagenome Rhizosphere
120 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
121 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
122 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
127 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
128 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
129 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
134 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
135 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
147 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
148 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
149 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
150 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
151 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
152 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
153 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
156 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
157 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.4
Metatranscriptomes 0
Isolates 8.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.91
Nodule 0
Rhizoplane 0
Rhizosphere 67.87
Stem 0
Stem Tuber 0
Unclassified 12.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_519107 2162886007 Bacteria 15803
2 JGI25162J39368_1000005 3300002737 Bacteria 435925
3 rootH2_10160211 3300003320 Bacteria 2490
4 rootL2_10046018 3300003322 Bacteria 5623
5 rootH1_10000705 3300003323 Bacteria 55845
6 rootH1_10095788 3300003323 Bacteria 10762
7 JGI25160J50197_1003635 3300003354 Bacteria 6845
8 JGI25160J50197_1013843 3300003354 Unclassified 2730
9 Ga0055526_1003610 3300003771 Bacteria 9696
10 Ga0055536_1000009 3300003781 Bacteria 311572
11 Ga0055528_1000189 3300003790 Bacteria 52496
12 Ga0055530_10000943 3300003791 Bacteria 23778
13 Ga0055530_10002898 3300003791 Bacteria 10420
14 Ga0055531_10017621 3300003794 Bacteria 3002
15 Ga0065165_1000038 3300005262 Bacteria 211664
16 Ga0065714_10003245 3300005288 Bacteria 9787
17 Ga0065714_10003470 3300005288 Bacteria 14235
18 Ga0065714_10005228 3300005288 Bacteria 8961
19 Ga0065704_10000223 3300005289 Bacteria 110188
20 Ga0065704_10072748 3300005289 Bacteria 8067
21 Ga0065704_10080501 3300005289 Bacteria 3936
22 Ga0065715_10277136 3300005293 Bacteria 1096
23 Ga0070658_10171945 3300005327 Bacteria 1820
24 Ga0070683_100171086 3300005329 Bacteria 2062
25 Ga0070670_100008856 3300005331 Bacteria 8592
26 Ga0070661_100318455 3300005344 Bacteria 1214
27 Ga0070668_100288671 3300005347 Bacteria 1372
28 Ga0070659_100323611 3300005366 Bacteria 1289
29 Ga0070667_100174171 3300005367 Bacteria 1901
30 Ga0070667_100787470 3300005367 Bacteria 882
31 Ga0070678_100439697 3300005456 Bacteria 1140
32 Ga0070684_100118239 3300005535 Bacteria 2382
33 Ga0068853_100039534 3300005539 Unclassified 4024
34 Ga0068857_100001923 3300005577 Bacteria 16746
35 Ga0068852_100001958 3300005616 Bacteria 14022
36 Ga0068852_100410886 3300005616 Bacteria 1333
37 Ga0068859_100135904 3300005617 Bacteria 2532
38 Ga0068864_100584294 3300005618 Bacteria 1083
39 Ga0068863_100003351 3300005841 Bacteria 15824
40 Ga0068860_100031323 3300005843 Bacteria 5112
41 Ga0097621_100009063 3300006237 Bacteria 7211
42 Ga0068871_100019883 3300006358 Bacteria 5134
43 Ga0068871_100078742 3300006358 Bacteria 2726
44 Ga0068865_100122050 3300006881 Bacteria 1939
45 Ga0097620_100135904 3300006931 Bacteria 2532
46 Ga0097620_100405471 3300006931 Unclassified 1459
47 Ga0105240_10000940 3300009093 Bacteria 51741
48 Ga0105240_10001435 3300009093 Bacteria 40778
49 Ga0105240_10008738 3300009093 Bacteria 14441
50 Ga0105240_10125690 3300009093 Bacteria 3082
51 Ga0105240_10265373 3300009093 Unclassified 1979
52 Ga0105240_10291352 3300009093 Bacteria 1871
53 Ga0105245_10863450 3300009098 Bacteria 945
54 Ga0114129_10002413 3300009147 Bacteria 25964
55 Ga0105241_10000801 3300009174 Bacteria 23852
56 Ga0105241_10182155 3300009174 Bacteria 1743
57 Ga0105237_10026377 3300009545 Bacteria 5938
58 Ga0105237_10164937 3300009545 Bacteria 2214
59 Ga0105237_10333565 3300009545 Bacteria 1521
60 Ga0105238_10004486 3300009551 Bacteria 13831
61 Ga0105238_10666846 3300009551 Bacteria 1051
62 Ga0105239_10000032 3300010375 Bacteria 225528
63 Ga0105239_10000222 3300010375 Bacteria 83623
64 Ga0105239_10020453 3300010375 Bacteria 7300
65 Ga0105239_10112777 3300010375 Unclassified 3015
66 Ga0105246_10073282 3300011119 Bacteria 2417
67 Ga0157373_10000175 3300013100 Bacteria 52539
68 Ga0157373_10000253 3300013100 Bacteria 43594
69 Ga0157373_10035692 3300013100 Bacteria 3568
70 Ga0157371_10003940 3300013102 Bacteria 13184
71 Ga0157371_10045017 3300013102 Bacteria 3141
72 Ga0157371_10121411 3300013102 Bacteria 1858
73 Ga0157370_10004061 3300013104 Bacteria 16966
74 Ga0157370_10005140 3300013104 Bacteria 14752
75 Ga0157370_10016327 3300013104 Bacteria 7520
76 Ga0157370_10049250 3300013104 Bacteria 4033
77 Ga0157370_10260677 3300013104 Bacteria 1602
78 Ga0157370_10337104 3300013104 Unclassified 1390
79 Ga0157369_10190164 3300013105 Bacteria 2157
80 Ga0157378_10005406 3300013297 Bacteria 11200
81 Ga0157372_10000495 3300013307 Bacteria 43372
82 Ga0157372_10004907 3300013307 Bacteria 14218
83 Ga0157372_10057694 3300013307 Bacteria 4340
84 Ga0157380_10025207 3300014326 Unclassified 4508
85 Ga0157380_11233680 3300014326 Bacteria 792
86 Ga0182008_10000233 3300014497 Bacteria 43334
87 Ga0182008_10038640 3300014497 Bacteria 2386
88 Ga0157376_10012772 3300014969 Bacteria 6246
89 Ga0182006_1000202 3300015261 Bacteria 61447
90 Ga0182005_1000521 3300015265 Bacteria 19636
91 Ga0163161_10000184 3300017792 Bacteria 57293
92 Ga0163161_10000218 3300017792 Bacteria 52323
93 Ga0163161_10000902 3300017792 Bacteria 23001
94 Ga0163161_10260921 3300017792 Unclassified 1353
95 Ga0209436_105347 3300025208 Bacteria 2974
96 Ga0209436_116409 3300025208 Unclassified 1111
97 Ga0209437_100043 3300025233 Bacteria 440454
98 Ga0209026_1000386 3300025250 Bacteria 40046
99 Ga0209129_1016440 3300025258 Bacteria 1486
100 Ga0209673_1000123 3300025273 Bacteria 169208
101 Ga0209130_1004174 3300025284 Bacteria 5647
102 Ga0209675_1029572 3300025291 Bacteria 1317
103 Ga0209676_1000001 3300025292 Bacteria 1852142
104 Ga0209564_1004555 3300025295 Bacteria 8411
105 Ga0209564_1005909 3300025295 Bacteria 6781
106 Ga0209758_1005462 3300025297 Bacteria 9768
107 Ga0209758_1010986 3300025297 Bacteria 5316
108 Ga0209050_1000018 3300025298 Bacteria 723263
109 Ga0209050_1000800 3300025298 Bacteria 44353
110 Ga0207426_1000288 3300025302 Bacteria 100477
111 Ga0207426_1000993 3300025302 Bacteria 27797
112 Ga0207426_1028113 3300025302 Bacteria 1866
113 Ga0209257_1001352 3300025304 Bacteria 29651
114 Ga0207647_10069647 3300025904 Bacteria 2126
115 Ga0207647_10163381 3300025904 Unclassified 1298
116 Ga0207654_10009827 3300025911 Bacteria 4865
117 Ga0207695_10000067 3300025913 Bacteria 330915
118 Ga0207695_10001408 3300025913 Bacteria 40540
119 Ga0207695_10048705 3300025913 Bacteria 4474
120 Ga0207671_10017286 3300025914 Bacteria 5566
121 Ga0207671_10099598 3300025914 Bacteria 2200
122 Ga0207671_10125200 3300025914 Bacteria 1968
123 Ga0207694_10338604 3300025924 Bacteria 1244
124 Ga0207694_10415282 3300025924 Bacteria 1120
125 Ga0207650_10102576 3300025925 Bacteria 2204
126 Ga0207687_10544418 3300025927 Bacteria 973
127 Ga0207690_10444673 3300025932 Bacteria 1041
128 Ga0207704_10096334 3300025938 Bacteria 1959
129 Ga0207667_10000190 3300025949 Bacteria 90197
130 Ga0207667_10016869 3300025949 Bacteria 8238
131 Ga0207640_10376044 3300025981 Unclassified 1150
132 Ga0207677_10463182 3300026023 Bacteria 1089
133 Ga0207639_10149831 3300026041 Bacteria 1953
134 Ga0207698_11098364 3300026142 Bacteria 808
135 Ga0209969_1024933 3300027360 Bacteria 900
136 Ga0209968_1002792 3300027526 Bacteria 2618
137 Ga0268264_10017723 3300028381 Bacteria 5830
138 Ga0268264_10221591 3300028381 Bacteria 1742
139 Ga0307517_10146862 3300028786 Bacteria 1633
140 Ga0307515_10000107 3300028794 Bacteria 197046
141 Ga0316177_1039223 3300030731 Bacteria 2094
142 Ga0316181_1193775 3300030744 Bacteria 1144
143 Ga0265327_10000089 3300031251 Bacteria 197227
144 Ga0307509_10019787 3300031507 Bacteria 7659
145 Ga0307405_10000005 3300031731 Bacteria 376536
146 Ga0307412_10000237 3300031911 Bacteria 36026
147 Ga0307414_10000656 3300032004 Bacteria 17688
148 Ga0395905_0000003 3300037471 Bacteria 1347396
149 Ga0395905_0021319 3300037471 Bacteria 6130
150 Ga0439439_0029247 3300041406 Bacteria 1398
151 Ga0439439_0049196 3300041406 Bacteria 1103
152 Ga0451853_2189248 3300041512 Unclassified 1482
153 Ga0439445_0021301 3300042004 Bacteria 1628
154 Ga0439449_0043242 3300042007 Bacteria 1673
155 Ga0439457_009145 3300042014 Unclassified 2313
156 Ga0439457_010959 3300042014 Unclassified 2072
157 Ga0450897_004050 3300042128 Bacteria 1205
158 Ga0450894_003876 3300042131 Bacteria 1957
159 Ga0439434_0016287 3300042435 Bacteria 2221
160 Ga0466972_0007167 3300044658 Bacteria 5598
161 Ga0453684_0149475 3300044712 Bacteria 2778
162 Ga0466970_0138794 3300044765 Bacteria 1338
163 Ga0466959_0007181 3300045049 Bacteria 7800
164 Ga0495638_0205286 3300046460 Bacteria 1110
165 Ga0495607_0139164 3300046501 Bacteria 1254
166 Ga0495610_0000047 3300046512 Bacteria 151516
167 Ga0495610_0000904 3300046512 Bacteria 27595
168 Ga0495616_0002896 3300046513 Bacteria 11203
169 Ga0495668_0000676 3300046616 Bacteria 41126
170 Ga0495668_0001248 3300046616 Bacteria 25500
171 Ga0495611_0000421 3300046648 Bacteria 26276
172 Ga0495625_0000009 3300046660 Bacteria 404954
173 Ga0495625_0007060 3300046660 Bacteria 9869
174 Ga0495625_0098976 3300046660 Bacteria 2005
175 Ga0495671_0065728 3300046692 Bacteria 1785
176 Ga0495649_0000008 3300046694 Bacteria 483706
177 Ga0495686_0000752 3300047472 Bacteria 42761
178 Ga0496122_0001595 3300048925 Bacteria 35529
179 Ga0496123_0006808 3300048926 Bacteria 10973
180 Ga0496125_0099732 3300048928 Bacteria 2144
181 Ga0495678_005711 3300049459 Bacteria 6768
182 Ga0501047_0088913 3300049581 Bacteria 2966
183 Ga0501241_001184 3300049758 Bacteria 5424
184 Ga0501035_0205617 3300049822 Bacteria 1687
185 Ga0501044_0289719 3300049823 Bacteria 1569
186 nmdc:mga0k408_1007_c1 3300050493 Bacteria 15485
187 nmdc:mga05p37_2920_c1 3300050507 Bacteria 19838
188 Ga0500646_0063336 3300053090 Bacteria 1093
189 Ga0500583_0000032 3300053092 Bacteria 102260
190 Ga0500651_0000581 3300053093 Bacteria 18430
191 Ga0500556_0011702 3300053104 Bacteria 2603
192 Ga0500608_004041 3300053122 Bacteria 5616
193 Ga0500618_000424 3300053125 Bacteria 28474
194 Ga0500577_0109186 3300053142 Bacteria 1140
195 Ga0500589_086079 3300053147 Bacteria 1395
196 Ga0500616_0005548 3300053153 Bacteria 8543
197 Ga0500616_0101551 3300053153 Bacteria 1405
198 Ga0500616_0117502 3300053153 Bacteria 1275
199 Ga0500616_0127025 3300053153 Bacteria 1210
200 Ga0500622_0002142 3300053156 Bacteria 14668
201 Ga0500622_0047427 3300053156 Bacteria 2219
202 Ga0500627_0005093 3300053158 Bacteria 4317

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053092 Ga0500583_0000032 Ga0500583_0000032_36957_37658 207
2 iso_pu_bacteria 2890737413 2890740485 214
3 iso_pu_bacteria 2977243572 2977244702 214
4 iso_pu_bacteria 8055588893 8055588979 214
5 3300005289 Ga0065704_10080501 Ga0065704_100805012 218
6 3300005329 Ga0070683_100171086 Ga0070683_1001710862 218
7 3300006931 Ga0097620_100405471 Ga0097620_1004054712 220
8 3300014326 Ga0157380_10025207 Ga0157380_100252072 220
9 3300027360 Ga0209969_1024933 Ga0209969_10249331 220
10 3300027526 Ga0209968_1002792 Ga0209968_10027922 220
11 3300044712 Ga0453684_0149475 Ga0453684_0149475_648_1322 220
12 iso_pu_bacteria 2840677318 2840677656 223
13 iso_pu_bacteria 2896085136 2896085474 223
14 iso_pu_bacteria 2896109856 2896111027 223
15 3300005577 Ga0068857_100001923 Ga0068857_1000019237 224
16 3300009093 Ga0105240_10008738 Ga0105240_100087387 224
17 3300009093 Ga0105240_10291352 Ga0105240_102913523 224
18 3300009174 Ga0105241_10182155 Ga0105241_101821552 224
19 3300009545 Ga0105237_10333565 Ga0105237_103335652 224
20 3300013104 Ga0157370_10016327 Ga0157370_100163272 224
21 3300013105 Ga0157369_10190164 Ga0157369_101901642 224
22 iso_pu_bacteria 2643221667 2644371080 224
23 iso_pu_bacteria 2738541279 2738735412 224
24 iso_pu_bacteria 2738541285 2738767989 224
25 iso_pu_bacteria 2738543007 2739216994 224
26 iso_pu_bacteria 2818991442 2819577613 224
27 iso_pu_bacteria 2821136567 2821142213 224
28 iso_pu_bacteria 2904467357 2904470618 224
29 iso_pu_bacteria 2929150217 2929151110 224
30 iso_pu_bacteria 2929239360 2929245550 224
31 3300025904 Ga0207647_10163381 Ga0207647_101633812 226
32 iso_pu_bacteria 2883068021 2883071799 226
33 iso_pu_bacteria 2884791551 2884792589 226
34 3300013102 Ga0157371_10045017 Ga0157371_100450171 227
35 3300017792 Ga0163161_10000218 Ga0163161_1000021852 227
36 3300037471 Ga0395905_0000003 Ga0395905_0000003_911958_912647 227
37 3300037471 Ga0395905_0021319 Ga0395905_0021319_1223_1915 227
38 3300046512 Ga0495610_0000047 Ga0495610_0000047_134628_135314 227
39 3300046512 Ga0495610_0000904 Ga0495610_0000904_6143_6829 227
40 3300046660 Ga0495625_0000009 Ga0495625_0000009_230621_231307 227
41 3300046692 Ga0495671_0065728 Ga0495671_0065728_288_974 227
42 3300046694 Ga0495649_0000008 Ga0495649_0000008_17781_18467 227
43 3300002737 JGI25162J39368_1000005 JGI25162J39368_1000005303 228
44 3300003323 rootH1_10095788 rootH1_100957888 228
45 3300005288 Ga0065714_10005228 Ga0065714_100052282 228
46 3300005293 Ga0065715_10277136 Ga0065715_102771361 228
47 3300005327 Ga0070658_10171945 Ga0070658_101719452 228
48 3300005535 Ga0070684_100118239 Ga0070684_1001182393 228
49 3300010375 Ga0105239_10000032 Ga0105239_10000032143 228
50 3300010375 Ga0105239_10112777 Ga0105239_101127774 228
51 3300013100 Ga0157373_10000175 Ga0157373_1000017520 228
52 3300013307 Ga0157372_10004907 Ga0157372_100049072 228
53 3300015265 Ga0182005_1000521 Ga0182005_10005219 228
54 3300017792 Ga0163161_10000184 Ga0163161_1000018433 228
55 3300025208 Ga0209436_105347 Ga0209436_1053472 228
56 3300025233 Ga0209437_100043 Ga0209437_100043104 228
57 3300025250 Ga0209026_1000386 Ga0209026_100038631 228
58 3300025258 Ga0209129_1016440 Ga0209129_10164401 228
59 3300025302 Ga0207426_1028113 Ga0207426_10281132 228
60 3300046460 Ga0495638_0205286 Ga0495638_0205286_389_1075 228
61 3300046513 Ga0495616_0002896 Ga0495616_0002896_4249_4935 228
62 3300046660 Ga0495625_0007060 Ga0495625_0007060_2714_3400 228
63 3300046660 Ga0495625_0098976 Ga0495625_0098976_425_1120 228
64 3300049459 Ga0495678_005711 Ga0495678_005711_1270_1965 228
65 3300050493 nmdc:mga0k408_1007_c1 nmdc:mga0k408_1007_c1_6949_7635 228
66 3300053122 Ga0500608_004041 Ga0500608_004041_1977_2672 228
67 3300053153 Ga0500616_0117502 Ga0500616_0117502_327_1019 228
68 3300053156 Ga0500622_0002142 Ga0500622_0002142_3339_4025 228
69 iso_pu_bacteria 2738543023 2739301628 228
70 iso_pu_bacteria 2775506987 2776613708 228
71 3300031251 Ga0265327_10000089 Ga0265327_1000008968 229
72 3300053090 Ga0500646_0063336 Ga0500646_0063336_181_870 229
73 3300003354 JGI25160J50197_1013843 JGI25160J50197_10138433 230
74 3300005539 Ga0068853_100039534 Ga0068853_1000395342 230
75 3300005616 Ga0068852_100410886 Ga0068852_1004108862 230
76 3300006237 Ga0097621_100009063 Ga0097621_1000090634 230
77 3300006358 Ga0068871_100019883 Ga0068871_1000198836 230
78 3300006881 Ga0068865_100122050 Ga0068865_1001220503 230
79 3300009093 Ga0105240_10001435 Ga0105240_100014357 230
80 3300009093 Ga0105240_10265373 Ga0105240_102653732 230
81 3300009098 Ga0105245_10863450 Ga0105245_108634502 230
82 3300009174 Ga0105241_10000801 Ga0105241_1000080113 230
83 3300009551 Ga0105238_10004486 Ga0105238_1000448612 230
84 3300010375 Ga0105239_10020453 Ga0105239_100204538 230
85 3300013100 Ga0157373_10035692 Ga0157373_100356922 230
86 3300013307 Ga0157372_10057694 Ga0157372_100576945 230
87 3300014969 Ga0157376_10012772 Ga0157376_100127722 230
88 3300017792 Ga0163161_10260921 Ga0163161_102609212 230
89 3300025208 Ga0209436_116409 Ga0209436_1164092 230
90 3300025284 Ga0209130_1004174 Ga0209130_10041745 230
91 3300025302 Ga0207426_1000288 Ga0207426_10002885 230
92 3300025911 Ga0207654_10009827 Ga0207654_100098274 230
93 3300025913 Ga0207695_10001408 Ga0207695_1000140829 230
94 3300025914 Ga0207671_10017286 Ga0207671_100172863 230
95 3300025924 Ga0207694_10415282 Ga0207694_104152822 230
96 3300025927 Ga0207687_10544418 Ga0207687_105444181 230
97 3300025938 Ga0207704_10096334 Ga0207704_100963342 230
98 3300026041 Ga0207639_10149831 Ga0207639_101498312 230
99 3300044658 Ga0466972_0007167 Ga0466972_0007167_680_1372 230
100 3300045049 Ga0466959_0007181 Ga0466959_0007181_6561_7256 230
101 3300046501 Ga0495607_0139164 Ga0495607_0139164_237_929 230
102 3300046616 Ga0495668_0000676 Ga0495668_0000676_37863_38555 230
103 3300053104 Ga0500556_0011702 Ga0500556_0011702_1341_2033 230
104 3300053142 Ga0500577_0109186 Ga0500577_0109186_82_774 230
105 3300053153 Ga0500616_0005548 Ga0500616_0005548_2118_2885 230
106 3300053153 Ga0500616_0101551 Ga0500616_0101551_89_781 230
107 3300053158 Ga0500627_0005093 Ga0500627_0005093_3140_3832 230
108 3300003354 JGI25160J50197_1003635 JGI25160J50197_10036351 231
109 3300003771 Ga0055526_1003610 Ga0055526_10036104 231
110 3300003781 Ga0055536_1000009 Ga0055536_1000009204 231
111 3300003790 Ga0055528_1000189 Ga0055528_10001899 231
112 3300003791 Ga0055530_10000943 Ga0055530_1000094313 231
113 3300003791 Ga0055530_10002898 Ga0055530_100028984 231
114 3300003794 Ga0055531_10017621 Ga0055531_100176212 231
115 3300005262 Ga0065165_1000038 Ga0065165_1000038191 231
116 3300005288 Ga0065714_10003245 Ga0065714_100032455 231
117 3300005344 Ga0070661_100318455 Ga0070661_1003184552 231
118 3300005366 Ga0070659_100323611 Ga0070659_1003236111 231
119 3300005616 Ga0068852_100001958 Ga0068852_10000195815 231
120 3300009093 Ga0105240_10125690 Ga0105240_101256903 231
121 3300009147 Ga0114129_10002413 Ga0114129_1000241312 231
122 3300009545 Ga0105237_10026377 Ga0105237_100263776 231
123 3300010375 Ga0105239_10000222 Ga0105239_1000022243 231
124 3300013104 Ga0157370_10005140 Ga0157370_100051408 231
125 3300013104 Ga0157370_10049250 Ga0157370_100492502 231
126 3300013307 Ga0157372_10000495 Ga0157372_1000049535 231
127 3300025273 Ga0209673_1000123 Ga0209673_1000123105 231
128 3300025291 Ga0209675_1029572 Ga0209675_10295721 231
129 3300025292 Ga0209676_1000001 Ga0209676_10000011146 231
130 3300025295 Ga0209564_1004555 Ga0209564_10045557 231
131 3300025295 Ga0209564_1005909 Ga0209564_10059099 231
132 3300025297 Ga0209758_1005462 Ga0209758_10054626 231
133 3300025297 Ga0209758_1010986 Ga0209758_10109861 231
134 3300025298 Ga0209050_1000018 Ga0209050_1000018438 231
135 3300025298 Ga0209050_1000800 Ga0209050_100080014 231
136 3300025302 Ga0207426_1000993 Ga0207426_10009931 231
137 3300025304 Ga0209257_1001352 Ga0209257_100135219 231
138 3300025904 Ga0207647_10069647 Ga0207647_100696473 231
139 3300025914 Ga0207671_10125200 Ga0207671_101252001 231
140 3300025932 Ga0207690_10444673 Ga0207690_104446731 231
141 3300025949 Ga0207667_10016869 Ga0207667_100168692 231
142 3300026023 Ga0207677_10463182 Ga0207677_104631821 231
143 3300026142 Ga0207698_11098364 Ga0207698_110983641 231
144 3300028786 Ga0307517_10146862 Ga0307517_101468622 231
145 3300031731 Ga0307405_10000005 Ga0307405_10000005280 231
146 3300044765 Ga0466970_0138794 Ga0466970_0138794_215_913 231
147 3300046616 Ga0495668_0001248 Ga0495668_0001248_23786_24484 231
148 3300046648 Ga0495611_0000421 Ga0495611_0000421_22617_23315 231
149 3300049581 Ga0501047_0088913 Ga0501047_0088913_1617_2312 231
150 3300050507 nmdc:mga05p37_2920_c1 nmdc:mga05p37_2920_c1_15802_16497 231
151 2162886007 SwRhRL2b_contig_519107 SwRhRL2b_0013.00000560 232
152 3300003320 rootH2_10160211 rootH2_101602113 232
153 3300003322 rootL2_10046018 rootL2_100460183 232
154 3300003323 rootH1_10000705 rootH1_1000070512 232
155 3300005288 Ga0065714_10003470 Ga0065714_1000347017 232
156 3300005289 Ga0065704_10000223 Ga0065704_1000022386 232
157 3300005289 Ga0065704_10072748 Ga0065704_100727483 232
158 3300005331 Ga0070670_100008856 Ga0070670_1000088567 232
159 3300005347 Ga0070668_100288671 Ga0070668_1002886711 232
160 3300005367 Ga0070667_100174171 Ga0070667_1001741711 232
161 3300005367 Ga0070667_100787470 Ga0070667_1007874701 232
162 3300005456 Ga0070678_100439697 Ga0070678_1004396971 232
163 3300005617 Ga0068859_100135904 Ga0068859_1001359042 232
164 3300005618 Ga0068864_100584294 Ga0068864_1005842942 232
165 3300005841 Ga0068863_100003351 Ga0068863_1000033518 232
166 3300005843 Ga0068860_100031323 Ga0068860_1000313233 232
167 3300006358 Ga0068871_100078742 Ga0068871_1000787422 232
168 3300006931 Ga0097620_100135904 Ga0097620_1001359042 232
169 3300009093 Ga0105240_10000940 Ga0105240_1000094036 232
170 3300009545 Ga0105237_10164937 Ga0105237_101649372 232
171 3300009551 Ga0105238_10666846 Ga0105238_106668462 232
172 3300011119 Ga0105246_10073282 Ga0105246_100732821 232
173 3300013100 Ga0157373_10000253 Ga0157373_100002539 232
174 3300013102 Ga0157371_10003940 Ga0157371_100039402 232
175 3300013102 Ga0157371_10121411 Ga0157371_101214112 232
176 3300013104 Ga0157370_10004061 Ga0157370_1000406110 232
177 3300013104 Ga0157370_10260677 Ga0157370_102606771 232
178 3300013104 Ga0157370_10337104 Ga0157370_103371042 232
179 3300013297 Ga0157378_10005406 Ga0157378_100054062 232
180 3300014326 Ga0157380_11233680 Ga0157380_112336801 232
181 3300014497 Ga0182008_10000233 Ga0182008_1000023313 232
182 3300014497 Ga0182008_10038640 Ga0182008_100386402 232
183 3300015261 Ga0182006_1000202 Ga0182006_100020252 232
184 3300017792 Ga0163161_10000902 Ga0163161_1000090216 232
185 3300025913 Ga0207695_10000067 Ga0207695_1000006735 232
186 3300025913 Ga0207695_10048705 Ga0207695_100487051 232
187 3300025914 Ga0207671_10099598 Ga0207671_100995982 232
188 3300025924 Ga0207694_10338604 Ga0207694_103386042 232
189 3300025925 Ga0207650_10102576 Ga0207650_101025762 232
190 3300025949 Ga0207667_10000190 Ga0207667_100001908 232
191 3300025981 Ga0207640_10376044 Ga0207640_103760441 232
192 3300028381 Ga0268264_10017723 Ga0268264_100177233 232
193 3300028381 Ga0268264_10221591 Ga0268264_102215913 232
194 3300028794 Ga0307515_10000107 Ga0307515_10000107127 232
195 3300030731 Ga0316177_1039223 Ga0316177_10392233 232
196 3300030744 Ga0316181_1193775 Ga0316181_11937752 232
197 3300031507 Ga0307509_10019787 Ga0307509_100197873 232
198 3300031911 Ga0307412_10000237 Ga0307412_1000023725 232
199 3300032004 Ga0307414_10000656 Ga0307414_1000065617 232
200 3300041406 Ga0439439_0029247 Ga0439439_0029247_391_1092 232
201 3300041406 Ga0439439_0049196 Ga0439439_0049196_167_931 232
202 3300041512 Ga0451853_2189248 Ga0451853_2189248_635_1336 232
203 3300042004 Ga0439445_0021301 Ga0439445_0021301_173_874 232
204 3300042007 Ga0439449_0043242 Ga0439449_0043242_316_1017 232
205 3300042014 Ga0439457_009145 Ga0439457_009145_908_1609 232
206 3300042014 Ga0439457_010959 Ga0439457_010959_459_1160 232
207 3300042128 Ga0450897_004050 Ga0450897_004050_337_1038 232
208 3300042131 Ga0450894_003876 Ga0450894_003876_847_1548 232
209 3300042435 Ga0439434_0016287 Ga0439434_0016287_460_1161 232
210 3300047472 Ga0495686_0000752 Ga0495686_0000752_4992_5696 232
211 3300048925 Ga0496122_0001595 Ga0496122_0001595_33878_34582 232
212 3300048926 Ga0496123_0006808 Ga0496123_0006808_9486_10190 232
213 3300048928 Ga0496125_0099732 Ga0496125_0099732_291_995 232
214 3300049758 Ga0501241_001184 Ga0501241_001184_190_891 232
215 3300049822 Ga0501035_0205617 Ga0501035_0205617_606_1325 232
216 3300049823 Ga0501044_0289719 Ga0501044_0289719_518_1237 232
217 3300053093 Ga0500651_0000581 Ga0500651_0000581_13387_14085 232
218 3300053125 Ga0500618_000424 Ga0500618_000424_3321_4022 232
219 3300053147 Ga0500589_086079 Ga0500589_086079_562_1260 232
220 3300053153 Ga0500616_0127025 Ga0500616_0127025_110_808 232
221 3300053156 Ga0500622_0047427 Ga0500622_0047427_305_1003 232

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09365

DUF2461

Conserved hypothetical protein (DUF2461)

36

241

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1jyo-assembly1.cif.gz_D structure of the salmonella virulence effector sptp in complex with its secretion chaperone sicp 0.6198 91 218
4akx-assembly1.cif.gz_A structure of the heterodimeric complex exou-spcu from the type iii secretion system (t3ss) of pseudomonas aeruginosa 0.5431 104 222
2xga-assembly1.cif.gz_B mtsl spin-labelled shigella flexneri spa15 0.5389 73 215
2a8e-assembly1.cif.gz_A three-dimensional structure of bacillus subtilis q45498 putative protein at resolution 2.5a. northeast structural genomics consortium target sr204. 0.5156 6 225
2a8e-assembly1.cif.gz_A three-dimensional structure of bacillus subtilis q45498 putative protein at resolution 2.5a. northeast structural genomics consortium target sr204. 0.5142 6 225
ID Description Score Start End Superfamily
1jyoD00 Alpha Beta;2-Layer Sandwich;Yope Regulator; Chain: A,; 0.6198 91 218 3.30.1460.10
af_A0A0B4LGH8_107_272_2.40.160.120 Mainly Beta;Beta Barrel;Porin; 0.6055 70 119 2.40.160.120
af_P9WGE9_70_239_2.60.40.200 Mainly Beta;Sandwich;Immunoglobulin-like;Superoxide dismutase, copper/zinc binding domain 0.5935 103 119 2.60.40.200
3mqzA00 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Protein of unknown function DUF1054 0.4939 41 221 3.30.930.20
1jyoD00 Alpha Beta;2-Layer Sandwich;Yope Regulator; Chain: A,; 0.4895 91 218 3.30.1460.10
ID Description Score Start End GO Terms
AF-A0A4Q3U7Z4-F1-model_v4 deleted 0.9868 9 207
AF-A0A3L9ZDH3-F1-model_v4 deleted 0.9837 4 232
AF-A0A401UCS2-F1-model_v4 TIGR02453 family protein 0.9817 9 232
AF-A0A5C7FPH3-F1-model_v4 DUF2461 domain-containing protein 0.9809 8 232
AF-A0A3C2AQB2-F1-model_v4 TIGR02453 family protein 0.9772 85 232

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pLDDT pTM Quality
94.08 0.89 High
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Predicted Structure (AlphaFold2)

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