F333763

General Info

Members Datasets Scaffolds Average Seq Length
221 126 173 1029

Family's Representative Sequence

Representative Sequence 3300048903|Ga0496100_0010349|Ga0496100_0010349_1183_4413
Length 1076
Sequence VQIICANREGEHFTGSVILRIVSALHLQDINMTLSQAAFSDILSRRDWENPVVTSLHRLDAHPPFASWRDEAAARDDSPSASLQSLNGEWGFRYFTQPEAVPASWLLQDLPDTTTLPVPANWQMHGFDAPIYTNVQYPIPVNPPLVPTENPTGCYSLTFSTDAAWLDNGQTRIIFDGVNSAFHLWCNGHWIGYSQDSRLPAEFDLTPYLRPGKNRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVTLMHKPQVHLADVQLETRLSPEFYRAELRARVRVALPAEVSSRYQLRLTLWQGEQQIAQCQQPLGSAIIDERGHYPERALLSLPVEKPALWSAETPHLYRATLALLDKNQQLIEVEAYDVGFRQVTIDNGLLCLNGKPLLIRGTNRHEHHPERGQVVDEATMRRDIELMKQHNFNAVRCSHYPNHPLWYRLCDQYGLYVVDEANIETHGMQPMNRLSDDPRWFAAYSERVTRMVQRDRNHCSIIIWSLGNESGHGATHDALYRWVKSSDPTRPVQYEGGGADTAATDIICPMYARVDEDQPFPAVPKWSLKKWIGLPGETRPLILCEYAHAMGNSFGGFAKYWQAFRQFPRLQGGFVWDWVDQSLTRYDDQGEPWQAYGGDFGDKPNDRQFCMNGLVFADRTPHPALYEAQCAQQFWQFAVDPGDPLSFTVSSDYLFRHSDNEVLRWRIEQAGRVVTEGEVPLDIAPQGQQRITLPSPPALQGVCWLNVAVHQIQPTQWSAAGWRVAWHQWALPSSLALPSKPESGEAPGLHDDTREIVITHQQQRWHFSRHSGELTQWFVDEQPTLLSPLQDCFIRAPLDNDIGTSEAERVDPNAWVERWKAAGYDQMSSQLVSMTANALPQAVQIETLHSWLAHGQIAFISRKRYLINAQGELQLQLSVEQSRGLPPPARIGLRCELTQIPQQVSWLGLGPHENYPDRQLAAQFSRWELPLDQLSTPYVFPGENGLRCGTRQLDSGSWQVSGDFAFSLSRFSLEQLREASHRHHLRPEAGCWLHLDACHMGVGGDDSWSPSVSPEFLLTQQRWQAELMICQPTRAALSSDAGKSASETAR

Samples

Sample ID Description Type Environment
1 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
2 2506520008 Serratia plymuthica AS12 Isolate Unclassified
3 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
4 2511231035 Pantoea sp. GM01 Isolate Rhizosphere
5 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
6 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
7 2602042067 Enterobacter sp. NFIX58 Isolate Rhizoplane
8 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
9 2608642108 Pantoea agglomerans NFPP29 Isolate Rhizoplane
10 2609459761 Enterobacter sp. NFR05 Isolate Rhizoplane
11 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
12 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
13 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
14 2706794495 Dickeya zeae ZJU1202 Isolate Unclassified
15 2711768156 Atlantibacter hermannii DDE1 Isolate Unclassified
16 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
17 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
18 2791355275 Enterobacter sp. Sa187 Isolate Unclassified
19 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
20 2844528606 Pantoea sp. R-72498 v. 2 Isolate Unclassified
21 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
22 2865014394 Pantoea sp. R-71966 Isolate Unclassified
23 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
24 2876601092 Pantoea endophytica 596 Isolate Unclassified
25 2881609920 Pantoea sp. ARC607 Isolate Rhizosphere
26 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
27 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
28 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
29 2904504865 Serratia marcescens 1822 Isolate Unclassified
30 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
31 2919150387 Rahnella aceris 1817 Isolate Unclassified
32 2927143783 Rahnella sp. 2050 Isolate Unclassified
33 2932406140 Serratia sp. 2723 Isolate Rhizosphere
34 2937967321 Serratia sp. YC16 Isolate Unclassified
35 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
36 2939577877 Serratia sp. 509 Isolate Rhizosphere
37 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
38 2945874760 Phytobacter diazotrophicus UAEU22 Isolate Rhizosphere
39 2945951305 Pantoea agglomerans W2I1 Isolate Rhizosphere
40 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
41 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
42 2978975091 Pantoea anthophila SORGH_AS 797 Isolate Unclassified
43 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
44 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
45 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
46 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
47 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
48 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
49 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
50 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
51 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
52 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
53 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
54 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
55 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
56 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
57 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
64 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
65 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
66 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
67 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
71 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
77 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
79 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
85 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
86 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
89 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
90 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
91 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
92 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
95 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
96 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
97 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
98 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
99 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
100 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
101 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
102 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
103 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
104 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
105 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
106 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
107 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
108 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
113 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
114 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
115 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
116 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
117 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
118 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
119 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
120 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
121 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
122 640753048 Serratia proteamaculans 568 Isolate Endosphere
123 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
124 8016733728 Pantoea sp. SORGH_AS 659 Isolate Unclassified
125 8019499862 Kluyvera sp. 1366 Isolate Rhizosphere
126 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.73
Metatranscriptomes 0
Isolates 21.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.14
Nodule 2.71
Rhizoplane 4.07
Rhizosphere 49.77
Stem 0
Stem Tuber 0.45
Unclassified 34.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25163J39215_1000012 3300002771 Bacteria 86410
2 JGI25164J39214_1000009 3300002772 Bacteria 303437
3 rootH2_10005144 3300003320 Bacteria 31230
4 Ga0055538_1000005 3300003751 Bacteria 575218
5 Ga0055539_1000007 3300003752 Bacteria 575218
6 Ga0055533_1000009 3300003756 Bacteria 575218
7 Ga0055525_1000010 3300003759 Bacteria 575218
8 Ga0055541_1000005 3300003841 Bacteria 575218
9 Ga0058692_1000105 3300003856 Bacteria 55652
10 Ga0058692_1000242 3300003856 Bacteria 30656
11 Ga0058692_1000322 3300003856 Bacteria 23773
12 Ga0058692_1000699 3300003856 Bacteria 13786
13 Ga0070668_100048181 3300005347 Bacteria 3277
14 Ga0070665_100016012 3300005548 Bacteria 7527
15 Ga0079104_1000248 3300006946 Bacteria 72191
16 Ga0079104_1000699 3300006946 Bacteria 30533
17 Ga0079104_1001557 3300006946 Bacteria 15046
18 Ga0105251_10000426 3300009011 Bacteria 40879
19 Ga0105251_10000478 3300009011 Bacteria 37893
20 Ga0105251_10001497 3300009011 Bacteria 20068
21 Ga0105251_10001916 3300009011 Bacteria 17055
22 Ga0105251_10009659 3300009011 Bacteria 5672
23 Ga0105244_10000019 3300009036 Bacteria 242333
24 Ga0105244_10000590 3300009036 Bacteria 32567
25 Ga0105244_10000835 3300009036 Bacteria 26067
26 Ga0105244_10007945 3300009036 Bacteria 6681
27 Ga0105250_10000009 3300009092 Bacteria 330307
28 Ga0105250_10000021 3300009092 Bacteria 239960
29 Ga0105247_10000030 3300009101 Bacteria 187803
30 Ga0105241_10000001 3300009174 Bacteria 879793
31 Ga0157373_10000401 3300013100 Bacteria 34739
32 Ga0157373_10008678 3300013100 Bacteria 7542
33 Ga0157371_10000007 3300013102 Bacteria 401847
34 Ga0157371_10000391 3300013102 Bacteria 55062
35 Ga0157371_10005848 3300013102 Bacteria 10280
36 Ga0157371_10011582 3300013102 Bacteria 6779
37 Ga0157370_10000742 3300013104 Bacteria 40766
38 Ga0182006_1000020 3300015261 Bacteria 285318
39 Ga0183366_1001 3300015679 Bacteria 2743932
40 Ga0183370_1001 3300015680 Bacteria 2743932
41 Ga0183369_1001 3300015685 Bacteria 2743932
42 Ga0183368_1001 3300015687 Bacteria 2743932
43 Ga0163161_10000031 3300017792 Bacteria 166584
44 Ga0213876_10000025 3300021384 Bacteria 236747
45 Ga0209760_100029 3300025207 Bacteria 149076
46 Ga0209784_100001 3300025224 Bacteria 3600592
47 Ga0209566_100001 3300025225 Bacteria 3600765
48 Ga0209674_100002 3300025226 Bacteria 3600592
49 Ga0209563_100008 3300025230 Bacteria 1554545
50 Ga0207427_100002 3300025231 Bacteria 1355321
51 Ga0209437_100007 3300025233 Bacteria 938377
52 Ga0209437_100199 3300025233 Bacteria 120313
53 Ga0209677_100004 3300025253 Bacteria 1554545
54 Ga0209233_1000943 3300025261 Bacteria 12615
55 Ga0207696_1000001 3300025711 Bacteria 2579611
56 Ga0207696_1000005 3300025711 Bacteria 642078
57 Ga0207696_1000061 3300025711 Bacteria 241730
58 Ga0207696_1000254 3300025711 Bacteria 69759
59 Ga0207696_1001074 3300025711 Bacteria 16130
60 Ga0207655_1000023 3300025728 Bacteria 467070
61 Ga0207655_1000025 3300025728 Bacteria 449261
62 Ga0207655_1000041 3300025728 Bacteria 333962
63 Ga0207655_1000521 3300025728 Bacteria 49022
64 Ga0207655_1001438 3300025728 Bacteria 22066
65 Ga0207655_1007337 3300025728 Bacteria 7158
66 Ga0207713_1000001 3300025735 Bacteria 2295391
67 Ga0207713_1000018 3300025735 Bacteria 362635
68 Ga0207713_1000022 3300025735 Bacteria 351775
69 Ga0207713_1002304 3300025735 Bacteria 14033
70 Ga0207713_1008400 3300025735 Bacteria 5954
71 Ga0207713_1008973 3300025735 Bacteria 5687
72 Ga0207710_10000068 3300025900 Bacteria 152636
73 Ga0207654_10000004 3300025911 Bacteria 902334
74 Ga0209281_1000001 3300027111 Bacteria 1933496
75 Ga0209281_1000003 3300027111 Bacteria 1260089
76 Ga0209281_1000041 3300027111 Bacteria 347825
77 Ga0209371_1000010 3300027312 Bacteria 922021
78 Ga0209371_1000117 3300027312 Bacteria 134858
79 Ga0209371_1000140 3300027312 Bacteria 119103
80 Ga0209371_1000403 3300027312 Bacteria 45182
81 Ga0209371_1000542 3300027312 Bacteria 35419
82 Ga0209371_1000644 3300027312 Bacteria 30722
83 Ga0209371_1001178 3300027312 Bacteria 19095
84 Ga0209371_1004409 3300027312 Bacteria 6154
85 Ga0209371_1007352 3300027312 Bacteria 3855
86 Ga0268256_1000022 3300030500 Bacteria 531115
87 Ga0268256_1000094 3300030500 Bacteria 140741
88 Ga0268256_1000102 3300030500 Bacteria 129989
89 Ga0268256_1000357 3300030500 Bacteria 43782
90 Ga0268256_1000549 3300030500 Bacteria 30722
91 Ga0268256_1003725 3300030500 Bacteria 6708
92 Ga0436365_1279401 3300039437 Bacteria 294819
93 Ga0439438_000020 3300041405 Bacteria 111381
94 Ga0439438_000279 3300041405 Bacteria 22963
95 Ga0439439_0001857 3300041406 Bacteria 4348
96 Ga0439466_0000012 3300041411 Bacteria 179902
97 Ga0439452_000003 3300042010 Bacteria 942815
98 Ga0450907_000084 3300042146 Bacteria 36905
99 Ga0466959_0010186 3300045049 Bacteria 6711
100 Ga0495627_000019 3300046453 Bacteria 309691
101 Ga0495591_000011 3300046458 Bacteria 309685
102 Ga0495591_000028 3300046458 Bacteria 182419
103 Ga0495596_0001292 3300046500 Bacteria 14468
104 Ga0495648_0013692 3300046524 Bacteria 5981
105 Ga0495654_0000032 3300046530 Bacteria 205780
106 Ga0495654_0000066 3300046530 Bacteria 126103
107 Ga0495668_0007553 3300046616 Bacteria 6937
108 Ga0495625_0001638 3300046660 Bacteria 26305
109 Ga0495588_0002217 3300046674 Bacteria 8320
110 Ga0495589_0000003 3300046794 Bacteria 453448
111 Ga0495660_0000062 3300046810 Bacteria 129883
112 Ga0495672_0000020 3300047320 Bacteria 432845
113 Ga0495672_0000061 3300047320 Bacteria 212024
114 Ga0495679_000018 3300047446 Bacteria 239433
115 Ga0495681_0009335 3300047470 Bacteria 6054
116 Ga0496100_0010349 3300048903 Bacteria 5278
117 Ga0496101_0000165 3300048904 Bacteria 56240
118 Ga0496102_0001985 3300048905 Bacteria 17670
119 Ga0496104_0019833 3300048907 Bacteria 6158
120 Ga0496105_0001349 3300048908 Bacteria 17228
121 Ga0496116_0000007 3300048919 Bacteria 795464
122 Ga0496116_0000170 3300048919 Bacteria 131308
123 Ga0496116_0001093 3300048919 Bacteria 32614
124 Ga0496117_0000199 3300048920 Bacteria 118320
125 Ga0496117_0000241 3300048920 Bacteria 103487
126 Ga0496117_0037973 3300048920 Bacteria 3580
127 Ga0496118_0000381 3300048921 Bacteria 74577
128 Ga0496118_0003584 3300048921 Bacteria 19328
129 Ga0496118_0004695 3300048921 Bacteria 16013
130 Ga0496118_0016734 3300048921 Bacteria 6708
131 Ga0496118_0020744 3300048921 Bacteria 5817
132 Ga0496118_0040578 3300048921 Bacteria 3699
133 Ga0496119_0000078 3300048922 Bacteria 140556
134 Ga0496119_0000110 3300048922 Bacteria 115586
135 Ga0496119_0000145 3300048922 Bacteria 99245
136 Ga0496119_0000195 3300048922 Bacteria 85376
137 Ga0496119_0000273 3300048922 Bacteria 73280
138 Ga0496119_0000335 3300048922 Bacteria 65774
139 Ga0496119_0002233 3300048922 Bacteria 21569
140 Ga0496119_0011472 3300048922 Bacteria 7329
141 Ga0496119_0015935 3300048922 Bacteria 5752
142 Ga0496119_0020241 3300048922 Bacteria 4860
143 Ga0496120_0000009 3300048923 Bacteria 386727
144 Ga0496120_0000151 3300048923 Bacteria 115582
145 Ga0496120_0000246 3300048923 Bacteria 91306
146 Ga0496120_0000265 3300048923 Bacteria 87441
147 Ga0496120_0000287 3300048923 Bacteria 84850
148 Ga0496120_0000417 3300048923 Bacteria 67929
149 Ga0496120_0000568 3300048923 Bacteria 56359
150 Ga0496120_0001297 3300048923 Bacteria 31060
151 Ga0496120_0006410 3300048923 Bacteria 9042
152 Ga0496121_0000131 3300048924 Bacteria 167955
153 Ga0496121_0008201 3300048924 Bacteria 12392
154 Ga0496122_0000026 3300048925 Bacteria 360871
155 Ga0496122_0000520 3300048925 Bacteria 79579
156 Ga0496122_0000925 3300048925 Bacteria 53549
157 Ga0496122_0001968 3300048925 Bacteria 30698
158 Ga0496122_0015431 3300048925 Bacteria 7304
159 Ga0496123_0000005 3300048926 Bacteria 658131
160 Ga0496123_0000152 3300048926 Bacteria 140376
161 Ga0496123_0000801 3300048926 Bacteria 50851
162 Ga0496123_0003930 3300048926 Bacteria 16129
163 Ga0496123_0005551 3300048926 Bacteria 12641
164 Ga0496123_0009546 3300048926 Bacteria 8725
165 Ga0496123_0015912 3300048926 Bacteria 6137
166 Ga0496123_0019783 3300048926 Bacteria 5291
167 Ga0496124_0000008 3300048927 Bacteria 864372
168 Ga0496124_0000307 3300048927 Bacteria 90604
169 Ga0496124_0004694 3300048927 Bacteria 15783
170 Ga0496124_0005018 3300048927 Bacteria 15135
171 Ga0496124_0034890 3300048927 Bacteria 4406
172 Ga0496125_0001697 3300048928 Bacteria 30731
173 Ga0496125_0009337 3300048928 Bacteria 10107

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 8046991243 8046991668 923
2 iso_pu_bacteria 2971403814 2971408482 983
3 iso_pu_bacteria 2643221676 2644424899 984
4 iso_pu_bacteria 2938649242 2938655013 984
5 3300041406 Ga0439439_0001857 Ga0439439_0001857_465_3566 988
6 3300045049 Ga0466959_0010186 Ga0466959_0010186_1689_4790 988
7 3300048926 Ga0496123_0009546 Ga0496123_0009546_5488_8469 991
8 3300048907 Ga0496104_0019833 Ga0496104_0019833_2454_5561 993
9 3300048922 Ga0496119_0000145 Ga0496119_0000145_45453_48560 993
10 3300048923 Ga0496120_0000417 Ga0496120_0000417_43798_46905 993
11 3300009011 Ga0105251_10000426 Ga0105251_100004262 999
12 3300009174 Ga0105241_10000001 Ga0105241_10000001551 999
13 3300025735 Ga0207713_1000018 Ga0207713_100001893 999
14 3300025911 Ga0207654_10000004 Ga0207654_10000004579 999
15 3300027111 Ga0209281_1000003 Ga0209281_10000031231 999
16 3300048921 Ga0496118_0016734 Ga0496118_0016734_2931_6038 999
17 3300048922 Ga0496119_0000195 Ga0496119_0000195_215_3304 1000
18 3300048923 Ga0496120_0000287 Ga0496120_0000287_80226_83315 1000
19 3300048927 Ga0496124_0000008 Ga0496124_0000008_861069_864158 1000
20 3300030500 Ga0268256_1003725 Ga0268256_10037253 1004
21 3300047446 Ga0495679_000018 Ga0495679_000018_10189_13296 1005
22 3300046660 Ga0495625_0001638 Ga0495625_0001638_7369_10476 1006
23 3300048926 Ga0496123_0000801 Ga0496123_0000801_35871_38945 1007
24 3300009092 Ga0105250_10000009 Ga0105250_100000095 1008
25 3300025711 Ga0207696_1000005 Ga0207696_1000005460 1008
26 3300027312 Ga0209371_1000644 Ga0209371_10006445 1009
27 3300030500 Ga0268256_1000549 Ga0268256_100054925 1009
28 3300048919 Ga0496116_0000170 Ga0496116_0000170_68441_71524 1011
29 3300048922 Ga0496119_0000335 Ga0496119_0000335_12980_16063 1011
30 3300048923 Ga0496120_0000265 Ga0496120_0000265_82605_85688 1011
31 3300009011 Ga0105251_10009659 Ga0105251_100096595 1013
32 3300025735 Ga0207713_1008973 Ga0207713_10089735 1013
33 3300048921 Ga0496118_0040578 Ga0496118_0040578_224_3304 1013
34 3300048925 Ga0496122_0000026 Ga0496122_0000026_328743_331829 1014
35 3300048926 Ga0496123_0000005 Ga0496123_0000005_629058_632144 1014
36 3300009036 Ga0105244_10000019 Ga0105244_10000019145 1015
37 3300013102 Ga0157371_10000007 Ga0157371_1000000723 1015
38 3300013104 Ga0157370_10000742 Ga0157370_1000074234 1015
39 3300025728 Ga0207655_1000025 Ga0207655_1000025253 1015
40 3300048921 Ga0496118_0004695 Ga0496118_0004695_1821_4919 1015
41 3300048922 Ga0496119_0020241 Ga0496119_0020241_1752_4832 1015
42 3300048923 Ga0496120_0000568 Ga0496120_0000568_35956_39036 1015
43 3300006946 Ga0079104_1000248 Ga0079104_100024826 1017
44 3300015679 Ga0183366_1001 Ga0183366_1001207 1017
45 3300015680 Ga0183370_1001 Ga0183370_1001207 1017
46 3300015685 Ga0183369_1001 Ga0183369_1001207 1017
47 3300015687 Ga0183368_1001 Ga0183368_1001207 1017
48 3300027111 Ga0209281_1000041 Ga0209281_100004137 1017
49 3300048922 Ga0496119_0011472 Ga0496119_0011472_1448_4537 1017
50 3300048924 Ga0496121_0008201 Ga0496121_0008201_3974_7063 1017
51 3300048925 Ga0496122_0000925 Ga0496122_0000925_46135_49227 1017
52 3300048925 Ga0496122_0015431 Ga0496122_0015431_2793_5882 1017
53 3300048926 Ga0496123_0019783 Ga0496123_0019783_410_3499 1017
54 3300048928 Ga0496125_0009337 Ga0496125_0009337_3390_6479 1017
55 iso_pu_bacteria 2884086401 2884088459 1017
56 3300048922 Ga0496119_0000273 Ga0496119_0000273_67322_70411 1018
57 3300048923 Ga0496120_0006410 Ga0496120_0006410_4418_7507 1018
58 iso_pu_bacteria 2609459761 2609912480 1018
59 iso_pu_bacteria 2791355275 2793406550 1018
60 iso_pu_bacteria 2945874760 2945879329 1018
61 3300013102 Ga0157371_10005848 Ga0157371_100058484 1019
62 3300041405 Ga0439438_000020 Ga0439438_000020_33465_36548 1019
63 iso_pu_bacteria 2508501071 2508853228 1019
64 iso_pu_bacteria 2711768156 2712470478 1019
65 iso_pu_bacteria 2772190666 2772439801 1019
66 iso_pu_bacteria 2806310673 2807176766 1019
67 iso_pu_bacteria 2888366609 2888369912 1019
68 iso_pu_bacteria 2932406140 2932408882 1019
69 iso_pu_bacteria 2937967321 2937968450 1019
70 iso_pu_bacteria 2939577877 2939582014 1019
71 iso_pu_bacteria 640753048 640938716 1019
72 iso_pu_bacteria 8015394850 8015399193 1019
73 3300009036 Ga0105244_10007945 Ga0105244_100079455 1020
74 3300025728 Ga0207655_1000041 Ga0207655_1000041266 1020
75 3300046458 Ga0495591_000011 Ga0495591_000011_5008_8127 1020
76 3300048920 Ga0496117_0037973 Ga0496117_0037973_129_3209 1020
77 3300048921 Ga0496118_0020744 Ga0496118_0020744_1208_4294 1020
78 3300013100 Ga0157373_10000401 Ga0157373_100004011 1021
79 3300013102 Ga0157371_10000391 Ga0157371_1000039129 1021
80 3300025711 Ga0207696_1000254 Ga0207696_100025433 1021
81 3300027312 Ga0209371_1004409 Ga0209371_10044092 1021
82 3300048904 Ga0496101_0000165 Ga0496101_0000165_35956_39036 1021
83 3300048927 Ga0496124_0005018 Ga0496124_0005018_11557_14637 1021
84 iso_pu_bacteria 2791354903 2791924582 1021
85 3300009011 Ga0105251_10000478 Ga0105251_1000047830 1022
86 3300015261 Ga0182006_1000020 Ga0182006_1000020158 1022
87 3300021384 Ga0213876_10000025 Ga0213876_10000025193 1022
88 3300025735 Ga0207713_1008400 Ga0207713_10084001 1022
89 3300039437 Ga0436365_1279401 Ga0436365_1279401_256958_260032 1022
90 3300042010 Ga0439452_000003 Ga0439452_000003_783027_786104 1022
91 iso_pu_bacteria 2511231035 2511433951 1022
92 iso_pu_bacteria 2602042067 2603704154 1022
93 iso_pu_bacteria 2602042109 2603866678 1022
94 iso_pu_bacteria 2876601092 2876601370 1022
95 iso_pu_bacteria 2908669403 2908671357 1022
96 iso_pu_bacteria 2969079654 2969082408 1022
97 iso_pu_bacteria 8016733728 8016736992 1022
98 iso_pu_bacteria 8019499862 8019502199 1022
99 3300046530 Ga0495654_0000066 Ga0495654_0000066_806_3895 1023
100 3300046794 Ga0495589_0000003 Ga0495589_0000003_84136_87225 1023
101 iso_pu_bacteria 2608642108 2608668441 1023
102 iso_pu_bacteria 2844528606 2844532970 1023
103 iso_pu_bacteria 2865014394 2865018196 1023
104 iso_pu_bacteria 2881609920 2881613125 1023
105 iso_pu_bacteria 2939602548 2939606721 1023
106 iso_pu_bacteria 2945951305 2945954065 1023
107 iso_pu_bacteria 2978975091 2978976543 1023
108 3300003856 Ga0058692_1000699 Ga0058692_10006998 1024
109 3300027312 Ga0209371_1000010 Ga0209371_1000010792 1024
110 3300027312 Ga0209371_1000117 Ga0209371_100011795 1024
111 3300030500 Ga0268256_1000022 Ga0268256_100002273 1024
112 3300030500 Ga0268256_1000357 Ga0268256_100035739 1024
113 3300006946 Ga0079104_1000699 Ga0079104_100069914 1025
114 3300013102 Ga0157371_10011582 Ga0157371_100115823 1025
115 3300027111 Ga0209281_1000001 Ga0209281_10000011799 1025
116 3300003320 rootH2_10005144 rootH2_1000514420 1026
117 3300003856 Ga0058692_1000242 Ga0058692_100024221 1026
118 3300006946 Ga0079104_1001557 Ga0079104_10015577 1026
119 3300009036 Ga0105244_10000590 Ga0105244_1000059020 1026
120 3300009036 Ga0105244_10000835 Ga0105244_1000083518 1026
121 3300013100 Ga0157373_10008678 Ga0157373_100086783 1026
122 3300025728 Ga0207655_1000023 Ga0207655_1000023376 1026
123 3300025728 Ga0207655_1007337 Ga0207655_10073372 1026
124 3300025735 Ga0207713_1002304 Ga0207713_10023046 1026
125 3300027312 Ga0209371_1000403 Ga0209371_100040312 1026
126 3300027312 Ga0209371_1007352 Ga0209371_10073522 1026
127 3300030500 Ga0268256_1000094 Ga0268256_1000094109 1026
128 3300041405 Ga0439438_000279 Ga0439438_000279_8319_11426 1026
129 3300046458 Ga0495591_000028 Ga0495591_000028_81716_84796 1026
130 3300046530 Ga0495654_0000032 Ga0495654_0000032_142439_145519 1026
131 3300046616 Ga0495668_0007553 Ga0495668_0007553_870_3950 1026
132 3300046674 Ga0495588_0002217 Ga0495588_0002217_4681_7788 1026
133 3300047320 Ga0495672_0000020 Ga0495672_0000020_266302_269430 1026
134 3300048919 Ga0496116_0001093 Ga0496116_0001093_3220_6312 1026
135 3300048922 Ga0496119_0000078 Ga0496119_0000078_63010_66099 1026
136 3300048922 Ga0496119_0015935 Ga0496119_0015935_1789_4881 1026
137 3300048923 Ga0496120_0000009 Ga0496120_0000009_74070_77159 1026
138 3300048923 Ga0496120_0000246 Ga0496120_0000246_72058_75150 1026
139 3300048926 Ga0496123_0005551 Ga0496123_0005551_3134_6214 1026
140 3300048927 Ga0496124_0004694 Ga0496124_0004694_11699_14791 1026
141 iso_pu_bacteria 2506520007 2506579334 1026
142 iso_pu_bacteria 2506520008 2506584473 1026
143 iso_pu_bacteria 2654587920 2656277555 1026
144 iso_pu_bacteria 2687453601 2689445868 1026
145 iso_pu_bacteria 2869551831 2869555258 1026
146 3300003856 Ga0058692_1000105 Ga0058692_100010530 1027
147 3300003856 Ga0058692_1000322 Ga0058692_10003222 1027
148 3300005347 Ga0070668_100048181 Ga0070668_1000481811 1027
149 3300005548 Ga0070665_100016012 Ga0070665_1000160127 1027
150 3300009011 Ga0105251_10001916 Ga0105251_1000191613 1027
151 3300009101 Ga0105247_10000030 Ga0105247_1000003089 1027
152 3300017792 Ga0163161_10000031 Ga0163161_1000003154 1027
153 3300025233 Ga0209437_100199 Ga0209437_10019982 1027
154 3300025711 Ga0207696_1000001 Ga0207696_10000012115 1027
155 3300025711 Ga0207696_1001074 Ga0207696_10010743 1027
156 3300025728 Ga0207655_1001438 Ga0207655_100143814 1027
157 3300025735 Ga0207713_1000001 Ga0207713_100000179 1027
158 3300025735 Ga0207713_1000022 Ga0207713_1000022178 1027
159 3300025900 Ga0207710_10000068 Ga0207710_1000006889 1027
160 3300027312 Ga0209371_1000140 Ga0209371_100014079 1027
161 3300027312 Ga0209371_1000542 Ga0209371_100054214 1027
162 3300027312 Ga0209371_1001178 Ga0209371_10011786 1027
163 3300030500 Ga0268256_1000102 Ga0268256_100010255 1027
164 3300041411 Ga0439466_0000012 Ga0439466_0000012_162647_165769 1027
165 3300046453 Ga0495627_000019 Ga0495627_000019_260000_263119 1027
166 3300047320 Ga0495672_0000061 Ga0495672_0000061_133403_136525 1027
167 3300048905 Ga0496102_0001985 Ga0496102_0001985_3724_6858 1027
168 3300048919 Ga0496116_0000007 Ga0496116_0000007_48007_51126 1027
169 3300048920 Ga0496117_0000199 Ga0496117_0000199_73838_76972 1027
170 3300048921 Ga0496118_0000381 Ga0496118_0000381_30095_33229 1027
171 3300048922 Ga0496119_0000110 Ga0496119_0000110_67775_70912 1027
172 3300048922 Ga0496119_0002233 Ga0496119_0002233_11540_14662 1027
173 3300048923 Ga0496120_0000151 Ga0496120_0000151_67771_70908 1027
174 3300048925 Ga0496122_0001968 Ga0496122_0001968_26001_29135 1027
175 3300048926 Ga0496123_0003930 Ga0496123_0003930_3057_6191 1027
176 3300048927 Ga0496124_0000307 Ga0496124_0000307_11605_14742 1027
177 3300048927 Ga0496124_0034890 Ga0496124_0034890_560_3697 1027
178 3300047446 Ga0495679_000018 Ga0495679_000018_95192_98335 1028
179 3300048925 Ga0496122_0000520 Ga0496122_0000520_54514_57627 1028
180 3300048926 Ga0496123_0000152 Ga0496123_0000152_25416_28529 1028
181 iso_pu_bacteria 2585427591 2585829299 1028
182 iso_pu_bacteria 2585427592 2585834609 1028
183 iso_pu_bacteria 2904474040 2904474681 1028
184 iso_pu_bacteria 2904504865 2904506101 1028
185 iso_pu_bacteria 2919150387 2919151027 1028
186 iso_pu_bacteria 2927143783 2927145901 1028
187 iso_pu_bacteria 2706794495 2707101719 1029
188 iso_pu_bacteria 2854601825 2854602246 1030
189 3300009011 Ga0105251_10001497 Ga0105251_100014974 1031
190 3300042146 Ga0450907_000084 Ga0450907_000084_11608_14823 1031
191 3300046500 Ga0495596_0001292 Ga0495596_0001292_2514_5684 1031
192 3300046524 Ga0495648_0013692 Ga0495648_0013692_2302_5517 1031
193 3300048903 Ga0496100_0010349 Ga0496100_0010349_1183_4413 1031
194 3300048908 Ga0496105_0001349 Ga0496105_0001349_2951_6127 1031
195 3300048920 Ga0496117_0000241 Ga0496117_0000241_67349_70579 1031
196 3300048921 Ga0496118_0003584 Ga0496118_0003584_15445_18621 1031
197 3300048923 Ga0496120_0001297 Ga0496120_0001297_15935_19111 1031
198 3300048924 Ga0496121_0000131 Ga0496121_0000131_106337_109513 1031
199 3300048926 Ga0496123_0015912 Ga0496123_0015912_1986_5162 1031
200 3300048928 Ga0496125_0001697 Ga0496125_0001697_26434_29595 1031
201 3300002771 JGI25163J39215_1000012 JGI25163J39215_100001260 1032
202 3300002772 JGI25164J39214_1000009 JGI25164J39214_1000009233 1032
203 3300003751 Ga0055538_1000005 Ga0055538_100000558 1032
204 3300003752 Ga0055539_1000007 Ga0055539_100000758 1032
205 3300003756 Ga0055533_1000009 Ga0055533_100000958 1032
206 3300003759 Ga0055525_1000010 Ga0055525_100001058 1032
207 3300003841 Ga0055541_1000005 Ga0055541_1000005506 1032
208 3300009092 Ga0105250_10000021 Ga0105250_10000021206 1032
209 3300025207 Ga0209760_100029 Ga0209760_10002974 1032
210 3300025224 Ga0209784_100001 Ga0209784_100001602 1032
211 3300025225 Ga0209566_100001 Ga0209566_100001602 1032
212 3300025226 Ga0209674_100002 Ga0209674_100002602 1032
213 3300025230 Ga0209563_100008 Ga0209563_100008606 1032
214 3300025231 Ga0207427_100002 Ga0207427_100002674 1032
215 3300025233 Ga0209437_100007 Ga0209437_10000758 1032
216 3300025253 Ga0209677_100004 Ga0209677_100004606 1032
217 3300025261 Ga0209233_1000943 Ga0209233_10009432 1032
218 3300025711 Ga0207696_1000061 Ga0207696_1000061206 1032
219 3300025728 Ga0207655_1000521 Ga0207655_100052116 1032
220 3300046810 Ga0495660_0000062 Ga0495660_0000062_60072_63170 1032
221 3300047470 Ga0495681_0009335 Ga0495681_0009335_1943_5047 1032

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02837

Glyco_hydro_2_N

Glycosyl hydrolases family 2, sugar binding domain

83

250

0.99

PF02836

Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

369

664

0.95

PF16353

LacZ_4

Beta-galactosidase, domain 4

673

758

0.94

PF00703

Glyco_hydro_2

Glycosyl hydrolases family 2

252

367

0.88

PF02929

Bgal_small_N

Beta galactosidase small chain

785

1055

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
6cvm-assembly1.cif.gz_A atomic resolution cryo-em structure of beta-galactosidase 0.9733 11 1031
6drv-assembly1.cif.gz_A beta-galactosidase 0.9724 9 1032
3vd7-assembly1.cif.gz_B e. coli (lacz) beta-galactosidase (n460s) in complex with galactotetrazole 0.9714 18 1032
3t0a-assembly1.cif.gz_B e. coli (lacz) beta-galactosidase (s796t) 0.9712 15 1032
7brs-assembly4.cif.gz_D e.coli beta-galactosidase (e537q) in complex with fluorescent probe ksa02 0.9712 9 1032
ID Description Score Start End Superfamily
1bglC05 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.967 742 1032 2.70.98.10
6drvA01 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.9668 9 223 2.60.120.260
3t0dA02 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9629 225 340 2.60.40.10
1bglC05 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.9573 742 1032 2.70.98.10
af_P00722_335_625_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9496 341 628 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A380AMD5-F1-model_v4 beta-galactosidase (EC 3.2.1.23) 0.9798 4 500 GO:0004565
GO:0005990
GO:0009341
AF-A0A3D2B5I4-F1-model_v4 beta-galactosidase (EC 3.2.1.23) 0.9797 8 427 GO:0004565
GO:0005990
GO:0009341
AF-A0A6M1HW25-F1-model_v4 deleted 0.9778 274 503
AF-A0A1W9F4R6-F1-model_v4 deleted 0.9725 261 361
AF-A0A379AJT8-F1-model_v4 beta-galactosidase (EC 3.2.1.23) 0.9711 662 1031 GO:0004565
GO:0005990
GO:0009341
GO:0030246

Feature Viewer

pLDDT pTM Quality
86.1 0.89 High
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Predicted Structure (AlphaFold2)

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