F333603

General Info

Members Datasets Scaffolds Average Seq Length
221 156 442 331

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0955203|Ga0436365_0955203_2022_3176
Length 384
Sequence MGRLLPRKAAAPLSFRANQHREPGFDNIMAAGAWSRHSPPGKPGAGGAVERRLGVKIGVLQFFSWPEKRVELGQVYARALQRIETMDRTGYDAVWLAEHHFSSFSVCPSVHMMGVLAAARTTRLRIGTGVSLAPFYHPLRLAEEVALLDQVSGGRVNWGAGRGFARVEFENFGVPPDESTSRFREAVEIVLRAWTEERLTFKGQHFNFDGVEVLPKPLQQPHPPVWMAATSESAIDWAAGRGFSILMDPHAAHRDIGRKRKYYFEKLKEAGHSAEGRELPIARLVALGDTAEEARETARAGAQWIVDSYFGAQHNPVGIKDPAKPGADPVQRYINEVILHGTVESVLDELRRLKEEIGLDYLLAAPLSHKTFGLLTEKIVPHLP

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
56 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
92 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
93 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
94 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
96 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
97 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
98 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
99 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
100 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
105 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
114 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
115 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
116 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
117 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
118 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
119 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
120 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
121 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
122 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
140 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
141 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
142 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
143 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
148 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
149 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
150 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
151 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
152 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
153 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.1
Metatranscriptomes 0.9
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.95
Nodule 0
Rhizoplane 3.17
Rhizosphere 80.09
Stem 0
Stem Tuber 0
Unclassified 9.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0955203 3300039437 Bacteria 9662
2 rootH2_10008512 3300003320 Bacteria 28336
3 rootL2_10034935 3300003322 Bacteria 19433
4 rootH1_10003311 3300003323 Bacteria 9754
5 Ga0070680_100008727 3300005336 Bacteria 7771
6 Ga0070714_100135616 3300005435 Bacteria 2204
7 Ga0070714_100245419 3300005435 Unclassified 1654
8 Ga0070713_100277366 3300005436 Bacteria 1537
9 Ga0070710_10126200 3300005437 Bacteria 1555
10 Ga0070711_100005908 3300005439 Bacteria 7348
11 Ga0070711_100370222 3300005439 Bacteria 1156
12 Ga0070681_10018820 3300005458 Bacteria 6911
13 Ga0070681_10182404 3300005458 Bacteria 2020
14 Ga0070706_100134546 3300005467 Bacteria 2307
15 Ga0070706_100210535 3300005467 Bacteria 1815
16 Ga0070706_100229038 3300005467 Bacteria 1735
17 Ga0070707_100101736 3300005468 Bacteria 2785
18 Ga0070698_100000788 3300005471 Bacteria 34385
19 Ga0070698_100200888 3300005471 Bacteria 1929
20 Ga0070699_100133534 3300005518 Bacteria 2189
21 Ga0070679_100012252 3300005530 Bacteria 8192
22 Ga0070684_100103952 3300005535 Bacteria 2541
23 Ga0070695_100015250 3300005545 Bacteria 4637
24 Ga0070665_100005618 3300005548 Bacteria 12898
25 Ga0070665_100336688 3300005548 Bacteria 1513
26 Ga0068855_100040553 3300005563 Bacteria 5526
27 Ga0068857_100009732 3300005577 Bacteria 8350
28 Ga0068856_100066177 3300005614 Bacteria 3571
29 Ga0068858_100358185 3300005842 Unclassified 1398
30 Ga0068860_100016308 3300005843 Bacteria 7244
31 Ga0068862_100147901 3300005844 Bacteria 2089
32 Ga0081455_10000866 3300005937 Bacteria 39055
33 Ga0081455_10012093 3300005937 Bacteria 8628
34 Ga0081455_10012838 3300005937 Bacteria 8319
35 Ga0081455_10125197 3300005937 Bacteria 2018
36 Ga0081539_10000493 3300005985 Bacteria 83122
37 Ga0081539_10014204 3300005985 Bacteria 5913
38 Ga0070717_10000664 3300006028 Bacteria 22126
39 Ga0070717_10122737 3300006028 Bacteria 2227
40 Ga0070717_10145415 3300006028 Bacteria 2047
41 Ga0075365_10083607 3300006038 Bacteria 2165
42 Ga0075365_10119198 3300006038 Bacteria 1819
43 Ga0075365_10134025 3300006038 Bacteria 1716
44 Ga0075365_10152507 3300006038 Bacteria 1608
45 Ga0075368_10098378 3300006042 Bacteria 1200
46 Ga0075364_10155223 3300006051 Bacteria 1544
47 Ga0075364_10216911 3300006051 Bacteria 1298
48 Ga0075362_10014589 3300006177 Bacteria 3174
49 Ga0075362_10018492 3300006177 Bacteria 2884
50 Ga0075367_10055391 3300006178 Bacteria 2353
51 Ga0075366_10009369 3300006195 Bacteria 5464
52 Ga0075370_10029836 3300006353 Bacteria 3040
53 Ga0075428_100233221 3300006844 Bacteria 1986
54 Ga0075431_100055237 3300006847 Bacteria 4096
55 Ga0075434_100007991 3300006871 Bacteria 9806
56 Ga0075435_100071837 3300007076 Bacteria 2826
57 Ga0099794_10158548 3300007265 Bacteria 1151
58 Ga0105240_10008338 3300009093 Bacteria 14828
59 Ga0111539_10264739 3300009094 Bacteria 2001
60 Ga0111539_10365052 3300009094 Bacteria 1680
61 Ga0105245_10291411 3300009098 Bacteria 1599
62 Ga0114129_10127039 3300009147 Bacteria 3505
63 Ga0114129_10442781 3300009147 Bacteria 1705
64 Ga0105242_10163262 3300009176 Unclassified 1952
65 Ga0105238_10027223 3300009551 Bacteria 5825
66 Ga0105238_10041312 3300009551 Bacteria 4670
67 Ga0099796_10027555 3300010159 Bacteria 1816
68 Ga0099796_10068065 3300010159 Bacteria 1279
69 Ga0157373_10053390 3300013100 Bacteria 2874
70 Ga0157371_10429593 3300013102 Bacteria 969
71 Ga0157370_10031661 3300013104 Bacteria 5172
72 Ga0157376_10131941 3300014969 Bacteria 2230
73 Ga0163161_10022273 3300017792 Bacteria 4460
74 Ga0206353_11855688 3300020082 Unclassified 1064
75 Ga0213876_10017496 3300021384 Bacteria 3784
76 Ga0213875_10000152 3300021388 Bacteria 73219
77 Ga0213875_10016595 3300021388 Bacteria 3568
78 Ga0213871_10007588 3300021441 Bacteria 2354
79 Ga0207426_1017785 3300025302 Bacteria 2520
80 Ga0207684_10133552 3300025910 Bacteria 2130
81 Ga0207684_10187326 3300025910 Bacteria 1784
82 Ga0207707_10003151 3300025912 Bacteria 14635
83 Ga0207707_10033575 3300025912 Bacteria 4491
84 Ga0207695_10095683 3300025913 Bacteria 2973
85 Ga0207693_10023953 3300025915 Bacteria 4846
86 Ga0207693_10071573 3300025915 Bacteria 2714
87 Ga0207663_10283758 3300025916 Bacteria 1231
88 Ga0207660_10107742 3300025917 Bacteria 2091
89 Ga0207646_10007788 3300025922 Bacteria 10833
90 Ga0207694_10141084 3300025924 Bacteria 1937
91 Ga0207659_10107558 3300025926 Bacteria 2114
92 Ga0207659_10145344 3300025926 Unclassified 1846
93 Ga0207687_10193551 3300025927 Bacteria 1584
94 Ga0207687_10198860 3300025927 Bacteria 1565
95 Ga0207700_10006517 3300025928 Bacteria 7055
96 Ga0207664_10029053 3300025929 Bacteria 4209
97 Ga0207664_10398337 3300025929 Bacteria 1224
98 Ga0207690_10280783 3300025932 Bacteria 1297
99 Ga0207670_10067907 3300025936 Bacteria 2454
100 Ga0207661_10011868 3300025944 Bacteria 6328
101 Ga0207679_10098788 3300025945 Bacteria 2277
102 Ga0207667_10032320 3300025949 Bacteria 5640
103 Ga0207651_10161883 3300025960 Bacteria 1755
104 Ga0207658_10255868 3300025986 Unclassified 1490
105 Ga0207703_10266299 3300026035 Unclassified 1551
106 Ga0207702_10160868 3300026078 Bacteria 2050
107 Ga0207641_10403701 3300026088 Bacteria 1313
108 Ga0207648_10255141 3300026089 Bacteria 1564
109 Ga0207676_10140949 3300026095 Bacteria 2064
110 Ga0207674_10014436 3300026116 Bacteria 8725
111 Ga0207674_10221884 3300026116 Bacteria 1838
112 Ga0207675_100517447 3300026118 Bacteria 1189
113 Ga0207683_10173857 3300026121 Bacteria 1951
114 Ga0207428_10106701 3300027907 Unclassified 2159
115 Ga0268266_10018231 3300028379 Bacteria 5985
116 Ga0268266_10224913 3300028379 Bacteria 1726
117 Ga0268265_10085921 3300028380 Bacteria 2499
118 Ga0268264_10481000 3300028381 Bacteria 1208
119 Ga0265338_10029089 3300028800 Bacteria 5490
120 Ga0265760_10062649 3300031090 Unclassified 1132
121 Ga0307408_100137125 3300031548 Bacteria 1916
122 Ga0307406_10137651 3300031901 Bacteria 1724
123 Ga0373949_0025735 3300035090 Unclassified 1375
124 Ga0373951_0024109 3300035091 Unclassified 1408
125 Ga0373936_0066481 3300035113 Bacteria 1480
126 Ga0373939_0015593 3300035114 Bacteria 1991
127 Ga0373957_0026655 3300035120 Bacteria 2093
128 Ga0373943_0018650 3300035170 Bacteria 3190
129 Ga0373943_0114261 3300035170 Bacteria 1428
130 Ga0373942_0062160 3300035207 Unclassified 1072
131 Ga0373961_0010224 3300035241 Unclassified 2308
132 Ga0373924_0043422 3300035410 Bacteria 1846
133 Ga0373931_0038981 3300035691 Bacteria 2488
134 Ga0373931_0172236 3300035691 Unclassified 1276
135 Ga0373935_0090281 3300035692 Bacteria 2005
136 Ga0373935_0276404 3300035692 Bacteria 1182
137 Ga0373927_0148632 3300035695 Bacteria 1534
138 Ga0373933_0033843 3300035724 Unclassified 2975
139 Ga0373947_0026100 3300035725 Bacteria 3411
140 Ga0373937_0003730 3300036401 Bacteria 12873
141 Ga0373937_0031201 3300036401 Bacteria 4827
142 Ga0373937_0163466 3300036401 Bacteria 2087
143 Ga0373937_0239653 3300036401 Bacteria 1709
144 Ga0373925_0018559 3300037068 Bacteria 5056
145 Ga0373925_0083716 3300037068 Bacteria 2430
146 Ga0373925_0203599 3300037068 Bacteria 1575
147 Ga0395899_0003543 3300037312 Bacteria 12368
148 Ga0395900_0058450 3300037418 Bacteria 3970
149 Ga0395898_0019683 3300037466 Bacteria 6865
150 Ga0436364_0022724 3300037853 Bacteria 40434
151 Ga0436364_0638468 3300037853 Bacteria 1394
152 Ga0436364_0898450 3300037853 Bacteria 5985
153 Ga0436364_1013423 3300037853 Bacteria 35685
154 Ga0395901_0007353 3300038443 Bacteria 11115
155 Ga0395901_0038853 3300038443 Bacteria 4922
156 Ga0395901_0054823 3300038443 Bacteria 4144
157 Ga0395901_0066589 3300038443 Bacteria 3751
158 Ga0395901_0083193 3300038443 Bacteria 3345
159 Ga0436365_0253442 3300039437 Bacteria 1711
160 Ga0436365_0955618 3300039437 Bacteria 3320
161 Ga0436360_0243387 3300039438 Bacteria 2883
162 Ga0436360_0352428 3300039438 Bacteria 1096
163 Ga0436360_0974729 3300039438 Bacteria 1559
164 Ga0436360_1101456 3300039438 Bacteria 6210
165 Ga0436361_0422788 3300039447 Bacteria 1534
166 Ga0436363_0336171 3300039450 Unclassified 1471
167 Ga0436362_0165241 3300039453 Bacteria 1578
168 Ga0436362_0503504 3300039453 Bacteria 2277
169 Ga0466963_0026230 3300044694 Bacteria 3725
170 Ga0466957_0012784 3300044842 Bacteria 4864
171 Ga0495592_0055143 3300046454 Bacteria 2942
172 Ga0495667_0117410 3300046559 Unclassified 1719
173 Ga0495635_0048936 3300046663 Bacteria 2914
174 Ga0495635_0121186 3300046663 Bacteria 1784
175 Ga0495635_0228366 3300046663 Unclassified 1258
176 Ga0495600_0094022 3300046809 Unclassified 1955
177 Ga0496108_0367121 3300048911 Bacteria 1257
178 Ga0496109_0458666 3300048912 Bacteria 1204
179 Ga0496110_0071484 3300048913 Bacteria 3077
180 Ga0496110_0442315 3300048913 Bacteria 1185
181 Ga0496112_0033525 3300048915 Bacteria 4993
182 Ga0496113_0160516 3300048916 Bacteria 1777
183 Ga0496113_0200553 3300048916 Bacteria 1586
184 Ga0496126_0118846 3300048929 Bacteria 2294
185 Ga0501033_0043357 3300049570 Bacteria 3351
186 Ga0501034_0003907 3300049571 Bacteria 16743
187 Ga0501034_0005670 3300049571 Bacteria 13585
188 Ga0501038_0412544 3300049574 Bacteria 1043
189 Ga0501043_0078324 3300049579 Bacteria 2597
190 Ga0501046_0124149 3300049580 Bacteria 1963
191 Ga0501047_0122656 3300049581 Bacteria 2480
192 Ga0501048_0112386 3300049582 Bacteria 1924
193 Ga0501048_0198270 3300049582 Bacteria 1423
194 Ga0501072_0038648 3300049588 Bacteria 3746
195 Ga0501072_0082788 3300049588 Bacteria 2544
196 Ga0501076_0133028 3300049592 Bacteria 2017
197 Ga0501079_0322517 3300049741 Bacteria 1209
198 Ga0501081_0306078 3300049743 Bacteria 1166
199 nmdc:mga03683_2651_c1 3300050489 Bacteria 5600
200 nmdc:mga03683_69103_c1 3300050489 Bacteria 1506
201 nmdc:mga00v17_186095_c1 3300050491 Bacteria 1340
202 nmdc:mga0k408_2067_c1 3300050493 Bacteria 10743
203 nmdc:mga07m45_33691_c1 3300050496 Bacteria 2845
204 nmdc:mga05p37_106571_c2 3300050507 Unclassified 2155
205 nmdc:mga0qj67_125675_c1 3300050509 Bacteria 2075
206 nmdc:mga0qj67_7849_c1 3300050509 Bacteria 7883
207 nmdc:mga06r32_36988_c1 3300050510 Bacteria 4618
208 nmdc:mga06r32_44503_c1 3300050510 Bacteria 4227
209 nmdc:mga0n895_78395_c1 3300050512 Bacteria 3288
210 nmdc:mga0a205_3089_c1 3300050515 Bacteria 14774
211 nmdc:mga0sz30_399_c1 3300050516 Bacteria 16539
212 Ga0495601_0017056 3300053077 Bacteria 4405
213 Ga0495601_0029200 3300053077 Bacteria 3419
214 Ga0495601_0339588 3300053077 Bacteria 977
215 Ga0495619_0040147 3300053085 Bacteria 3058
216 Ga0495619_0099759 3300053085 Bacteria 1975
217 Ga0500647_0067849 3300053091 Bacteria 1715
218 Ga0500568_0002161 3300053139 Bacteria 11856
219 Ga0500616_0000845 3300053153 Bacteria 34364
220 Ga0501082_0130777 3300060353 Bacteria 2178
221 Ga0530510_0063776 3300061734 Bacteria 2668
222 Ga0436365_0955203
223 rootH2_10008512
224 rootL2_10034935
225 rootH1_10003311
226 Ga0070680_100008727
227 Ga0070714_100135616
228 Ga0070714_100245419
229 Ga0070713_100277366
230 Ga0070710_10126200
231 Ga0070711_100005908
232 Ga0070711_100370222
233 Ga0070681_10018820
234 Ga0070681_10182404
235 Ga0070706_100134546
236 Ga0070706_100210535
237 Ga0070706_100229038
238 Ga0070707_100101736
239 Ga0070698_100000788
240 Ga0070698_100200888
241 Ga0070699_100133534
242 Ga0070679_100012252
243 Ga0070684_100103952
244 Ga0070695_100015250
245 Ga0070665_100005618
246 Ga0070665_100336688
247 Ga0068855_100040553
248 Ga0068857_100009732
249 Ga0068856_100066177
250 Ga0068858_100358185
251 Ga0068860_100016308
252 Ga0068862_100147901
253 Ga0081455_10000866
254 Ga0081455_10012093
255 Ga0081455_10012838
256 Ga0081455_10125197
257 Ga0081539_10000493
258 Ga0081539_10014204
259 Ga0070717_10000664
260 Ga0070717_10122737
261 Ga0070717_10145415
262 Ga0075365_10083607
263 Ga0075365_10119198
264 Ga0075365_10134025
265 Ga0075365_10152507
266 Ga0075368_10098378
267 Ga0075364_10155223
268 Ga0075364_10216911
269 Ga0075362_10014589
270 Ga0075362_10018492
271 Ga0075367_10055391
272 Ga0075366_10009369
273 Ga0075370_10029836
274 Ga0075428_100233221
275 Ga0075431_100055237
276 Ga0075434_100007991
277 Ga0075435_100071837
278 Ga0099794_10158548
279 Ga0105240_10008338
280 Ga0111539_10264739
281 Ga0111539_10365052
282 Ga0105245_10291411
283 Ga0114129_10127039
284 Ga0114129_10442781
285 Ga0105242_10163262
286 Ga0105238_10027223
287 Ga0105238_10041312
288 Ga0099796_10027555
289 Ga0099796_10068065
290 Ga0157373_10053390
291 Ga0157371_10429593
292 Ga0157370_10031661
293 Ga0157376_10131941
294 Ga0163161_10022273
295 Ga0206353_11855688
296 Ga0213876_10017496
297 Ga0213875_10000152
298 Ga0213875_10016595
299 Ga0213871_10007588
300 Ga0207426_1017785
301 Ga0207684_10133552
302 Ga0207684_10187326
303 Ga0207707_10003151
304 Ga0207707_10033575
305 Ga0207695_10095683
306 Ga0207693_10023953
307 Ga0207693_10071573
308 Ga0207663_10283758
309 Ga0207660_10107742
310 Ga0207646_10007788
311 Ga0207694_10141084
312 Ga0207659_10107558
313 Ga0207659_10145344
314 Ga0207687_10193551
315 Ga0207687_10198860
316 Ga0207700_10006517
317 Ga0207664_10029053
318 Ga0207664_10398337
319 Ga0207690_10280783
320 Ga0207670_10067907
321 Ga0207661_10011868
322 Ga0207679_10098788
323 Ga0207667_10032320
324 Ga0207651_10161883
325 Ga0207658_10255868
326 Ga0207703_10266299
327 Ga0207702_10160868
328 Ga0207641_10403701
329 Ga0207648_10255141
330 Ga0207676_10140949
331 Ga0207674_10014436
332 Ga0207674_10221884
333 Ga0207675_100517447
334 Ga0207683_10173857
335 Ga0207428_10106701
336 Ga0268266_10018231
337 Ga0268266_10224913
338 Ga0268265_10085921
339 Ga0268264_10481000
340 Ga0265338_10029089
341 Ga0265760_10062649
342 Ga0307408_100137125
343 Ga0307406_10137651
344 Ga0373949_0025735
345 Ga0373951_0024109
346 Ga0373936_0066481
347 Ga0373939_0015593
348 Ga0373957_0026655
349 Ga0373943_0018650
350 Ga0373943_0114261
351 Ga0373942_0062160
352 Ga0373961_0010224
353 Ga0373924_0043422
354 Ga0373931_0038981
355 Ga0373931_0172236
356 Ga0373935_0090281
357 Ga0373935_0276404
358 Ga0373927_0148632
359 Ga0373933_0033843
360 Ga0373947_0026100
361 Ga0373937_0003730
362 Ga0373937_0031201
363 Ga0373937_0163466
364 Ga0373937_0239653
365 Ga0373925_0018559
366 Ga0373925_0083716
367 Ga0373925_0203599
368 Ga0395899_0003543
369 Ga0395900_0058450
370 Ga0395898_0019683
371 Ga0436364_0022724
372 Ga0436364_0638468
373 Ga0436364_0898450
374 Ga0436364_1013423
375 Ga0395901_0007353
376 Ga0395901_0038853
377 Ga0395901_0054823
378 Ga0395901_0066589
379 Ga0395901_0083193
380 Ga0436365_0253442
381 Ga0436365_0955618
382 Ga0436360_0243387
383 Ga0436360_0352428
384 Ga0436360_0974729
385 Ga0436360_1101456
386 Ga0436361_0422788
387 Ga0436363_0336171
388 Ga0436362_0165241
389 Ga0436362_0503504
390 Ga0466963_0026230
391 Ga0466957_0012784
392 Ga0495592_0055143
393 Ga0495667_0117410
394 Ga0495635_0048936
395 Ga0495635_0121186
396 Ga0495635_0228366
397 Ga0495600_0094022
398 Ga0496108_0367121
399 Ga0496109_0458666
400 Ga0496110_0071484
401 Ga0496110_0442315
402 Ga0496112_0033525
403 Ga0496113_0160516
404 Ga0496113_0200553
405 Ga0496126_0118846
406 Ga0501033_0043357
407 Ga0501034_0003907
408 Ga0501034_0005670
409 Ga0501038_0412544
410 Ga0501043_0078324
411 Ga0501046_0124149
412 Ga0501047_0122656
413 Ga0501048_0112386
414 Ga0501048_0198270
415 Ga0501072_0038648
416 Ga0501072_0082788
417 Ga0501076_0133028
418 Ga0501079_0322517
419 Ga0501081_0306078
420 nmdc:mga03683_2651_c1
421 nmdc:mga03683_69103_c1
422 nmdc:mga00v17_186095_c1
423 nmdc:mga0k408_2067_c1
424 nmdc:mga07m45_33691_c1
425 nmdc:mga05p37_106571_c2
426 nmdc:mga0qj67_125675_c1
427 nmdc:mga0qj67_7849_c1
428 nmdc:mga06r32_36988_c1
429 nmdc:mga06r32_44503_c1
430 nmdc:mga0n895_78395_c1
431 nmdc:mga0a205_3089_c1
432 nmdc:mga0sz30_399_c1
433 Ga0495601_0017056
434 Ga0495601_0029200
435 Ga0495601_0339588
436 Ga0495619_0040147
437 Ga0495619_0099759
438 Ga0500647_0067849
439 Ga0500568_0002161
440 Ga0500616_0000845
441 Ga0501082_0130777
442 Ga0530510_0063776

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

55

361

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xkj-assembly1.cif.gz_B bacterial luciferase beta2 homodimer 0.8781 9 344
6fri-assembly2.cif.gz_D structure of luxb from photobacterium leiognathi 0.8769 9 344
6fri-assembly2.cif.gz_D structure of luxb from photobacterium leiognathi 0.8719 9 344
1luc-assembly1.cif.gz_A bacterial luciferase 0.8617 9 346
1xkj-assembly1.cif.gz_B bacterial luciferase beta2 homodimer 0.8603 9 344
ID Description Score Start End Superfamily
6friA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8744 9 344 3.20.20.30
6friA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8643 9 344 3.20.20.30
1bslA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8476 9 327 3.20.20.30
af_Q2G136_3_353_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8356 3 345 3.20.20.30
af_Q2G136_3_353_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8174 3 345 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A528B4J3-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9527 67 222 GO:0004497
GO:0005829
GO:0016705
AF-A0A528B4J3-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9297 67 222 GO:0004497
GO:0005829
GO:0016705
AF-A0A537UZ35-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9282 9 193 GO:0005829
GO:0016705
AF-A0A800EFR5-F1-model_v4 deleted 0.9277 9 146
AF-A0A2D8PVK1-F1-model_v4 Luciferase-like domain-containing protein 0.9262 9 234 GO:0004497
GO:0005829
GO:0016705

Map