F333236

General Info

Members Datasets Scaffolds Average Seq Length
221 166 442 180

Family's Representative Sequence

Representative Sequence 3300006058|Ga0075432_10163346|Ga0075432_101633462
Length 195
Sequence MIFTPTRLRDATIIDVERRGDERGFLARVFCEREFADHGLPTRFVQASTIFSPLRHTLRGLHFQEPPHAEGKLVRCTRGGVVVVIVDLRAGSPTHSEWLGVELSADNRRLLYVPEGFAQGYQTLMDDCEVAYQMTHEYVPAAARGVRWDDPAFGIEWPPAERRIISERDRSWPDYPVTRSSSARSSRSAARAMTG

Samples

Sample ID Description Type Environment
1 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
67 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
70 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
71 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
105 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
115 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
116 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
117 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
118 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
123 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
124 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
125 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
126 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
127 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
128 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
129 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
130 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
131 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
132 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
133 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
134 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
150 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
151 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
152 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
155 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
158 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
163 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
164 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
165 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
166 2791355197 Bradyrhizobium sp. C9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.55
Metatranscriptomes 0
Isolates 0.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.36
Rhizoplane 1.81
Rhizosphere 94.12
Stem 0
Stem Tuber 0
Unclassified 19.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075432_10163346 3300006058 Bacteria 862
2 MBSR1b_contig_9779121 2162886012 Bacteria 4031
3 Ga0065715_10005197 3300005293 Bacteria 4407
4 Ga0070690_100151041 3300005330 Bacteria 1585
5 Ga0068869_100767600 3300005334 Bacteria 827
6 Ga0070666_10113487 3300005335 Bacteria 1875
7 Ga0070680_100009465 3300005336 Bacteria 7484
8 Ga0070682_100020633 3300005337 Unclassified 3880
9 Ga0070682_100204129 3300005337 Bacteria 1396
10 Ga0068868_100047288 3300005338 Bacteria 3371
11 Ga0070689_100028659 3300005340 Bacteria 4211
12 Ga0070689_100587644 3300005340 Bacteria 963
13 Ga0070687_100116887 3300005343 Archaea 1519
14 Ga0070692_10024990 3300005345 Bacteria 2941
15 Ga0070692_10037629 3300005345 Unclassified 2461
16 Ga0070675_100009586 3300005354 Bacteria 7537
17 Ga0070675_100065707 3300005354 Bacteria 2999
18 Ga0070675_100356362 3300005354 Bacteria 1298
19 Ga0070671_100629449 3300005355 Unclassified 928
20 Ga0070671_100778802 3300005355 Bacteria 832
21 Ga0070674_100137250 3300005356 Unclassified 1831
22 Ga0070674_100556667 3300005356 Unclassified 963
23 Ga0070688_100409864 3300005365 Unclassified 1005
24 Ga0070714_100025405 3300005435 Bacteria 4888
25 Ga0070701_10228449 3300005438 Bacteria 1113
26 Ga0070711_100258111 3300005439 Unclassified 1370
27 Ga0070694_100016314 3300005444 Bacteria 4675
28 Ga0070678_100500290 3300005456 Bacteria 1072
29 Ga0070662_100938863 3300005457 Bacteria 739
30 Ga0068867_100635014 3300005459 Unclassified 935
31 Ga0068867_100643843 3300005459 Bacteria 929
32 Ga0068867_101222188 3300005459 Unclassified 691
33 Ga0070685_10172229 3300005466 Bacteria 1388
34 Ga0070707_100021358 3300005468 Bacteria 6117
35 Ga0070699_100018590 3300005518 Bacteria 5970
36 Ga0070679_100001165 3300005530 Bacteria 23040
37 Ga0070697_100196317 3300005536 Unclassified 1714
38 Ga0070697_100499896 3300005536 Bacteria 1063
39 Ga0070686_100430555 3300005544 Unclassified 1010
40 Ga0070695_100001040 3300005545 Bacteria 15180
41 Ga0070695_100013484 3300005545 Bacteria 4914
42 Ga0070695_100448308 3300005545 Bacteria 988
43 Ga0070696_100027874 3300005546 Bacteria 3852
44 Ga0070693_100028210 3300005547 Bacteria 3050
45 Ga0070693_100033755 3300005547 Bacteria 2826
46 Ga0070664_100060363 3300005564 Bacteria 3229
47 Ga0068854_100083314 3300005578 Bacteria 2365
48 Ga0068866_10282315 3300005718 Bacteria 1029
49 Ga0068861_101293756 3300005719 Bacteria 709
50 Ga0068870_10839096 3300005840 Unclassified 645
51 Ga0068862_100166744 3300005844 Bacteria 1969
52 Ga0081538_10000754 3300005981 Bacteria 35313
53 Ga0081538_10028126 3300005981 Bacteria 3877
54 Ga0070716_100493840 3300006173 Unclassified 901
55 Ga0070712_100246563 3300006175 Bacteria 1425
56 Ga0075428_100009483 3300006844 Bacteria 10805
57 Ga0075430_100141184 3300006846 Bacteria 2006
58 Ga0075430_100613521 3300006846 Bacteria 897
59 Ga0075431_100300712 3300006847 Bacteria 1621
60 Ga0075431_100654361 3300006847 Bacteria 1031
61 Ga0075433_10222777 3300006852 Bacteria 1675
62 Ga0075433_10326739 3300006852 Bacteria 1357
63 Ga0075434_100156205 3300006871 Bacteria 2300
64 Ga0075434_100557676 3300006871 Unclassified 1165
65 Ga0075429_100084156 3300006880 Bacteria 2772
66 Ga0075429_100813906 3300006880 Unclassified 818
67 Ga0068865_100524394 3300006881 Unclassified 991
68 Ga0075435_101156891 3300007076 Bacteria 677
69 Ga0111539_10212113 3300009094 Bacteria 2256
70 Ga0111539_11174100 3300009094 Unclassified 892
71 Ga0105245_10067061 3300009098 Bacteria 3250
72 Ga0105245_10139381 3300009098 Bacteria 2282
73 Ga0105245_10162009 3300009098 Bacteria 2123
74 Ga0105245_10403450 3300009098 Bacteria 1367
75 Ga0114129_10230008 3300009147 Bacteria 2497
76 Ga0105243_10487921 3300009148 Bacteria 1164
77 Ga0105242_11004788 3300009176 Unclassified 842
78 Ga0105238_10451943 3300009551 Bacteria 1282
79 Ga0105249_10242110 3300009553 Bacteria 1784
80 Ga0105249_10243473 3300009553 Bacteria 1779
81 Ga0105249_10813725 3300009553 Unclassified 999
82 Ga0105239_10563644 3300010375 Bacteria 1298
83 Ga0105246_11126077 3300011119 Bacteria 718
84 Ga0157373_10666332 3300013100 Bacteria 761
85 Ga0157369_10226054 3300013105 Bacteria 1958
86 Ga0157369_10665962 3300013105 Unclassified 1073
87 Ga0157374_10341361 3300013296 Unclassified 1487
88 Ga0157374_10645606 3300013296 Unclassified 1070
89 Ga0157378_10000946 3300013297 Bacteria 26663
90 Ga0157378_10100788 3300013297 Bacteria 2637
91 Ga0157378_10346366 3300013297 Unclassified 1450
92 Ga0157372_10050565 3300013307 Bacteria 4623
93 Ga0157372_10174118 3300013307 Bacteria 2490
94 Ga0157372_10554092 3300013307 Unclassified 1340
95 Ga0157375_10516682 3300013308 Unclassified 1358
96 Ga0157379_10749382 3300014968 Bacteria 919
97 Ga0214542_1000081 3300021321 Bacteria 121242
98 Ga0214543_1000042 3300021327 Bacteria 164433
99 Ga0213876_10078129 3300021384 Bacteria 1749
100 Ga0213875_10000154 3300021388 Bacteria 72534
101 Ga0213871_10137023 3300021441 Unclassified 738
102 Ga0207653_10019491 3300025885 Bacteria 2139
103 Ga0207642_10169225 3300025899 Bacteria 1181
104 Ga0207680_10376402 3300025903 Bacteria 1000
105 Ga0207645_10117834 3300025907 Bacteria 1722
106 Ga0207645_10186241 3300025907 Bacteria 1363
107 Ga0207707_10004100 3300025912 Bacteria 12909
108 Ga0207693_10255390 3300025915 Bacteria 1375
109 Ga0207663_10329565 3300025916 Unclassified 1150
110 Ga0207660_10012999 3300025917 Bacteria 5452
111 Ga0207646_10227088 3300025922 Unclassified 1687
112 Ga0207659_10004027 3300025926 Bacteria 8865
113 Ga0207659_10117323 3300025926 Bacteria 2034
114 Ga0207659_10291660 3300025926 Bacteria 1337
115 Ga0207687_10232634 3300025927 Bacteria 1456
116 Ga0207700_10615968 3300025928 Bacteria 967
117 Ga0207644_11331918 3300025931 Unclassified 603
118 Ga0207670_10044491 3300025936 Bacteria 2937
119 Ga0207704_10076662 3300025938 Bacteria 2143
120 Ga0207704_10452647 3300025938 Unclassified 1025
121 Ga0207689_10015793 3300025942 Bacteria 6393
122 Ga0207679_10487409 3300025945 Unclassified 1098
123 Ga0207651_10040430 3300025960 Bacteria 3085
124 Ga0207712_10181854 3300025961 Bacteria 1652
125 Ga0207640_10182029 3300025981 Unclassified 1576
126 Ga0207677_10343830 3300026023 Unclassified 1247
127 Ga0207708_10102786 3300026075 Bacteria 2213
128 Ga0207641_10076441 3300026088 Bacteria 2895
129 Ga0207648_10100842 3300026089 Bacteria 2530
130 Ga0207648_10442390 3300026089 Bacteria 1182
131 Ga0207648_10450627 3300026089 Bacteria 1172
132 Ga0207648_10538328 3300026089 Bacteria 1072
133 Ga0207676_10129514 3300026095 Bacteria 2143
134 Ga0207675_100325540 3300026118 Bacteria 1501
135 Ga0207675_100506315 3300026118 Bacteria 1202
136 Ga0207683_10619875 3300026121 Bacteria 1002
137 Ga0207428_10323888 3300027907 Bacteria 1138
138 Ga0207428_10372897 3300027907 Bacteria 1048
139 Ga0268265_10235529 3300028380 Bacteria 1612
140 Ga0307406_10720013 3300031901 Bacteria 835
141 Ga0307409_100113469 3300031995 Bacteria 2278
142 Ga0307409_100292482 3300031995 Bacteria 1511
143 Ga0307416_100272848 3300032002 Bacteria 1662
144 Ga0307416_102573279 3300032002 Bacteria 607
145 Ga0307415_100251170 3300032126 Bacteria 1437
146 Ga0373929_0000030 3300035085 Bacteria 50118
147 Ga0373931_0298862 3300035691 Bacteria 994
148 Ga0373935_0068521 3300035692 Bacteria 2283
149 Ga0395900_0171088 3300037418 Bacteria 2211
150 Ga0395898_0092987 3300037466 Bacteria 2899
151 Ga0395898_1447360 3300037466 Unclassified 614
152 Ga0395905_0118270 3300037471 Bacteria 2491
153 Ga0395905_0708610 3300037471 Bacteria 909
154 Ga0436364_0026673 3300037853 Bacteria 28953
155 Ga0395901_0177355 3300038443 Bacteria 2235
156 Ga0400487_37685 3300039110 Bacteria 1174
157 Ga0436365_1255558 3300039437 Bacteria 8261
158 Ga0436360_0629652 3300039438 Bacteria 1233
159 Ga0436362_0242240 3300039453 Bacteria 1243
160 Ga0451853_4066480 3300041512 Bacteria 875
161 Ga0453683_0002964 3300044673 Bacteria 12743
162 Ga0466963_0003370 3300044694 Bacteria 9123
163 Ga0453684_0007497 3300044712 Bacteria 20015
164 Ga0466957_0170325 3300044842 Bacteria 1418
165 Ga0451576_0011728 3300045051 Bacteria 9928
166 Ga0451576_0188371 3300045051 Unclassified 2155
167 Ga0451576_0269538 3300045051 Bacteria 1780
168 Ga0466958_0025508 3300045836 Bacteria 3486
169 Ga0466958_0102729 3300045836 Bacteria 1779
170 Ga0466967_0139645 3300045976 Bacteria 2256
171 Ga0466967_0904502 3300045976 Bacteria 878
172 Ga0495584_0157905 3300046491 Bacteria 1152
173 Ga0495596_0123513 3300046500 Bacteria 1005
174 Ga0495616_0062849 3300046513 Bacteria 1817
175 Ga0495628_0485901 3300046516 Unclassified 893
176 Ga0495642_0035701 3300046528 Bacteria 2007
177 Ga0495652_0475837 3300046529 Unclassified 870
178 Ga0495587_0160953 3300046536 Bacteria 1277
179 Ga0495667_0433761 3300046559 Unclassified 826
180 Ga0495668_0343585 3300046616 Bacteria 819
181 Ga0495589_0302333 3300046794 Bacteria 741
182 Ga0495604_0533741 3300047317 Unclassified 758
183 Ga0495674_0623600 3300047319 Unclassified 852
184 Ga0495677_0134700 3300047445 Unclassified 947
185 Ga0495677_0161280 3300047445 Bacteria 865
186 Ga0496101_0876885 3300048904 Unclassified 707
187 Ga0496108_0067012 3300048911 Bacteria 3028
188 Ga0496112_0004756 3300048915 Bacteria 11579
189 Ga0496113_0300649 3300048916 Bacteria 1285
190 Ga0501031_0025882 3300049568 Bacteria 3828
191 Ga0501032_0133931 3300049569 Bacteria 1634
192 Ga0501039_0149061 3300049575 Bacteria 1838
193 Ga0501040_0007846 3300049576 Bacteria 6916
194 Ga0501042_0150173 3300049578 Bacteria 1680
195 Ga0501043_0102734 3300049579 Bacteria 2246
196 Ga0501048_0056920 3300049582 Bacteria 2773
197 Ga0501048_0292123 3300049582 Bacteria 1159
198 Ga0501068_0038695 3300049584 Bacteria 2858
199 Ga0501071_0181449 3300049587 Bacteria 1577
200 Ga0501072_0024104 3300049588 Bacteria 4731
201 Ga0501072_0207582 3300049588 Bacteria 1561
202 Ga0501075_0021831 3300049591 Bacteria 4670
203 Ga0501079_0020082 3300049741 Bacteria 5104
204 Ga0501079_0241636 3300049741 Bacteria 1411
205 Ga0501080_0265891 3300049742 Bacteria 1562
206 Ga0501081_0683417 3300049743 Unclassified 770
207 Ga0501083_0099101 3300049744 Bacteria 1922
208 Ga0501045_0080187 3300049824 Bacteria 2406
209 Ga0501045_0197004 3300049824 Bacteria 1501
210 nmdc:mga05p37_576786_c1 3300050507 Bacteria 1275
211 nmdc:mga0qj67_264512_c1 3300050509 Bacteria 1395
212 nmdc:mga06r32_392735_c1 3300050510 Bacteria 1370
213 nmdc:mga06r32_81920_c1 3300050510 Bacteria 3143
214 nmdc:mga08y16_145106_c1 3300050511 Bacteria 2467
215 nmdc:mga08y16_25227_c1 3300050511 Bacteria 6268
216 nmdc:mga0a205_5255_c1 3300050515 Bacteria 11656
217 Ga0495612_0038518 3300053078 Bacteria 1943
218 Ga0495595_0009032 3300053084 Bacteria 4115
219 Ga0590071_021541 3300059421 Bacteria 1520
220 Ga0530510_0088884 3300061734 Bacteria 2252
221 2793069068 2791355197 Bacteria 8420563
222 Ga0075432_10163346
223 MBSR1b_contig_9779121
224 Ga0065715_10005197
225 Ga0070690_100151041
226 Ga0068869_100767600
227 Ga0070666_10113487
228 Ga0070680_100009465
229 Ga0070682_100020633
230 Ga0070682_100204129
231 Ga0068868_100047288
232 Ga0070689_100028659
233 Ga0070689_100587644
234 Ga0070687_100116887
235 Ga0070692_10024990
236 Ga0070692_10037629
237 Ga0070675_100009586
238 Ga0070675_100065707
239 Ga0070675_100356362
240 Ga0070671_100629449
241 Ga0070671_100778802
242 Ga0070674_100137250
243 Ga0070674_100556667
244 Ga0070688_100409864
245 Ga0070714_100025405
246 Ga0070701_10228449
247 Ga0070711_100258111
248 Ga0070694_100016314
249 Ga0070678_100500290
250 Ga0070662_100938863
251 Ga0068867_100635014
252 Ga0068867_100643843
253 Ga0068867_101222188
254 Ga0070685_10172229
255 Ga0070707_100021358
256 Ga0070699_100018590
257 Ga0070679_100001165
258 Ga0070697_100196317
259 Ga0070697_100499896
260 Ga0070686_100430555
261 Ga0070695_100001040
262 Ga0070695_100013484
263 Ga0070695_100448308
264 Ga0070696_100027874
265 Ga0070693_100028210
266 Ga0070693_100033755
267 Ga0070664_100060363
268 Ga0068854_100083314
269 Ga0068866_10282315
270 Ga0068861_101293756
271 Ga0068870_10839096
272 Ga0068862_100166744
273 Ga0081538_10000754
274 Ga0081538_10028126
275 Ga0070716_100493840
276 Ga0070712_100246563
277 Ga0075428_100009483
278 Ga0075430_100141184
279 Ga0075430_100613521
280 Ga0075431_100300712
281 Ga0075431_100654361
282 Ga0075433_10222777
283 Ga0075433_10326739
284 Ga0075434_100156205
285 Ga0075434_100557676
286 Ga0075429_100084156
287 Ga0075429_100813906
288 Ga0068865_100524394
289 Ga0075435_101156891
290 Ga0111539_10212113
291 Ga0111539_11174100
292 Ga0105245_10067061
293 Ga0105245_10139381
294 Ga0105245_10162009
295 Ga0105245_10403450
296 Ga0114129_10230008
297 Ga0105243_10487921
298 Ga0105242_11004788
299 Ga0105238_10451943
300 Ga0105249_10242110
301 Ga0105249_10243473
302 Ga0105249_10813725
303 Ga0105239_10563644
304 Ga0105246_11126077
305 Ga0157373_10666332
306 Ga0157369_10226054
307 Ga0157369_10665962
308 Ga0157374_10341361
309 Ga0157374_10645606
310 Ga0157378_10000946
311 Ga0157378_10100788
312 Ga0157378_10346366
313 Ga0157372_10050565
314 Ga0157372_10174118
315 Ga0157372_10554092
316 Ga0157375_10516682
317 Ga0157379_10749382
318 Ga0214542_1000081
319 Ga0214543_1000042
320 Ga0213876_10078129
321 Ga0213875_10000154
322 Ga0213871_10137023
323 Ga0207653_10019491
324 Ga0207642_10169225
325 Ga0207680_10376402
326 Ga0207645_10117834
327 Ga0207645_10186241
328 Ga0207707_10004100
329 Ga0207693_10255390
330 Ga0207663_10329565
331 Ga0207660_10012999
332 Ga0207646_10227088
333 Ga0207659_10004027
334 Ga0207659_10117323
335 Ga0207659_10291660
336 Ga0207687_10232634
337 Ga0207700_10615968
338 Ga0207644_11331918
339 Ga0207670_10044491
340 Ga0207704_10076662
341 Ga0207704_10452647
342 Ga0207689_10015793
343 Ga0207679_10487409
344 Ga0207651_10040430
345 Ga0207712_10181854
346 Ga0207640_10182029
347 Ga0207677_10343830
348 Ga0207708_10102786
349 Ga0207641_10076441
350 Ga0207648_10100842
351 Ga0207648_10442390
352 Ga0207648_10450627
353 Ga0207648_10538328
354 Ga0207676_10129514
355 Ga0207675_100325540
356 Ga0207675_100506315
357 Ga0207683_10619875
358 Ga0207428_10323888
359 Ga0207428_10372897
360 Ga0268265_10235529
361 Ga0307406_10720013
362 Ga0307409_100113469
363 Ga0307409_100292482
364 Ga0307416_100272848
365 Ga0307416_102573279
366 Ga0307415_100251170
367 Ga0373929_0000030
368 Ga0373931_0298862
369 Ga0373935_0068521
370 Ga0395900_0171088
371 Ga0395898_0092987
372 Ga0395898_1447360
373 Ga0395905_0118270
374 Ga0395905_0708610
375 Ga0436364_0026673
376 Ga0395901_0177355
377 Ga0400487_37685
378 Ga0436365_1255558
379 Ga0436360_0629652
380 Ga0436362_0242240
381 Ga0451853_4066480
382 Ga0453683_0002964
383 Ga0466963_0003370
384 Ga0453684_0007497
385 Ga0466957_0170325
386 Ga0451576_0011728
387 Ga0451576_0188371
388 Ga0451576_0269538
389 Ga0466958_0025508
390 Ga0466958_0102729
391 Ga0466967_0139645
392 Ga0466967_0904502
393 Ga0495584_0157905
394 Ga0495596_0123513
395 Ga0495616_0062849
396 Ga0495628_0485901
397 Ga0495642_0035701
398 Ga0495652_0475837
399 Ga0495587_0160953
400 Ga0495667_0433761
401 Ga0495668_0343585
402 Ga0495589_0302333
403 Ga0495604_0533741
404 Ga0495674_0623600
405 Ga0495677_0134700
406 Ga0495677_0161280
407 Ga0496101_0876885
408 Ga0496108_0067012
409 Ga0496112_0004756
410 Ga0496113_0300649
411 Ga0501031_0025882
412 Ga0501032_0133931
413 Ga0501039_0149061
414 Ga0501040_0007846
415 Ga0501042_0150173
416 Ga0501043_0102734
417 Ga0501048_0056920
418 Ga0501048_0292123
419 Ga0501068_0038695
420 Ga0501071_0181449
421 Ga0501072_0024104
422 Ga0501072_0207582
423 Ga0501075_0021831
424 Ga0501079_0020082
425 Ga0501079_0241636
426 Ga0501080_0265891
427 Ga0501081_0683417
428 Ga0501083_0099101
429 Ga0501045_0080187
430 Ga0501045_0197004
431 nmdc:mga05p37_576786_c1
432 nmdc:mga0qj67_264512_c1
433 nmdc:mga06r32_392735_c1
434 nmdc:mga06r32_81920_c1
435 nmdc:mga08y16_145106_c1
436 nmdc:mga08y16_25227_c1
437 nmdc:mga0a205_5255_c1
438 Ga0495612_0038518
439 Ga0495595_0009032
440 Ga0590071_021541
441 Ga0530510_0088884
442 2793069068

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00908

dTDP_sugar_isom

dTDP-4-dehydrorhamnose 3,5-epimerase

5

176

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6c46-assembly3.cif.gz_E-2 crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase from elizabethkingia anophelis nuhp1 0.975 1 174
6c46-assembly2.cif.gz_C crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase from elizabethkingia anophelis nuhp1 0.9692 1 174
3ryk-assembly1.cif.gz_B 1.63 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase (rfbc) from bacillus anthracis str. ames with tdp and ppi bound 0.966 2 174
1dzt-assembly1.cif.gz_B rmlc from salmonella typhimurium 0.9619 2 173
7pvi-assembly1.cif.gz_BBB dtdp-sugar epimerase 0.9588 2 173
ID Description Score Start End Superfamily
5buvB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9528 2 174 2.60.120.10
1epzA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9424 2 173 2.60.120.10
2ixcB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9422 1 173 2.60.120.10
2c0zA01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9354 1 173 2.60.120.10
6dinA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9318 12 174 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A1Q6VP32-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase 0.9999 1 145 GO:0005829
GO:0008830
GO:0019305
GO:0045226
AF-A0A1R3X2U9-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) 0.9947 2 173 GO:0005829
GO:0008830
GO:0019305
GO:0045226
AF-A0A7V6A1D4-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) 0.9946 1 173 GO:0005829
GO:0008830
GO:0019305
GO:0045226
AF-A0A532EID8-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) 0.9938 1 175 GO:0005829
GO:0008830
GO:0019305
GO:0045226
AF-A0A1W9J6I5-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) 0.9936 1 177 GO:0005829
GO:0008830
GO:0019305
GO:0045226

Map