F332907

General Info

Members Datasets Scaffolds Average Seq Length
221 165 171 544

Family's Representative Sequence

Representative Sequence 3300003322|rootL2_10060203|rootL2_100602031
Length 610
Sequence MDDRIIKNYSNYFLSWNIFEVINTRKLLYRSSSYYMSGSFQSIKSMINSNLNKISHSKTFTWMLRNISIAAATLLSVVTINAQKNRNTQLERPKLVVGLVVDQMRWDYLYRFYGKYGNDGFKRLLNTGYSLNNVHIPYVPTITALGHTCIYTGSVPAIHGIAGNDWTDKETGKGVYCTADESVQPVGTTNAKTGSHSPKNLWSTTVTDELRLATNFQGKVVGVSLKDRASILPAGHTPNGAFWFDDSTGNFITSTWYMNDLPQWVKSFNAQNLPEKLVANGWNTLLPINEYTESAPDNSPWEGLLGSAKTPTFPYSNLAKDYQAKKDNIRYTPFGNTLTLKLAEASVEGEKLGGDNITDFLAINLASTDYAGHKFGPNSIEVEDVYIRLDQDLAEFFKYLDSKVGKGEYTVFLSADHGGAHSVGFLKEHKIPTGFFGEDAEKNLNQKLKEKFGADKLINAIDNYQIYFDRKVLADSKLELDDVRNFAVKEIEKDPTVLYAVSVDKVQESSIPEPIKQRIINGINRQRSGDIQLISHDSMLPPYSKTGTTHSVWNSYDSHIPLIFMGWGVKQGESNKEYHMTDIAPTVSSLLKIQFPSGNVGNPITEVMGK

Samples

Sample ID Description Type Environment
1 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
2 2523533629 Kaistella palustris DSM 21579 Isolate Rhizosphere
3 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
4 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
5 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
6 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
7 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
8 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
9 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
10 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
11 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
12 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
13 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
14 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
15 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
16 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
17 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
18 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
19 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
20 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
21 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
22 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
23 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
24 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
25 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
26 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
27 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
28 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
29 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
30 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
31 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
32 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
33 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
34 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
35 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
36 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
37 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
38 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
39 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
40 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
41 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
42 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
43 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
44 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
45 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
46 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
47 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
48 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
49 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
50 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
51 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
52 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
53 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
54 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
55 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
56 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
57 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
58 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
59 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
60 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
62 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
63 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
64 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
65 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
66 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
67 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
68 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
69 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
70 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
71 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
72 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
73 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
74 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
75 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
76 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
77 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
78 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
79 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
80 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
81 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
82 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
83 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
84 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
85 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
86 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
87 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
88 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
89 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
90 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
91 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
92 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
93 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
94 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
95 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
96 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
97 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
98 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
99 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
100 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
101 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
102 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
104 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
119 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
120 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
124 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
128 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
129 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
130 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
131 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
132 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
133 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
134 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
135 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
138 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
139 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
140 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
141 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
142 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
143 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
146 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
147 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
152 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
160 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
163 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
164 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.92
Metatranscriptomes 0.45
Isolates 22.62

Biome Distribution

Category Percentage (%)
Aerial Root 0.9
Bulb 0
Endosphere 4.07
Nodule 0.45
Rhizoplane 0
Rhizosphere 76.47
Stem 0
Stem Tuber 0
Unclassified 18.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000578 3300001979 Bacteria 15758
2 JGI24737J22298_10012892 3300001990 Bacteria 2724
3 JGI25154J39366_1000227 3300002738 Bacteria 37673
4 JGI25165J46597_1001953 3300003214 Bacteria 8087
5 rootH1_10066542 3300003316 Bacteria 3962
6 rootH1_10108610 3300003316 Bacteria 2921
7 rootH2_10006910 3300003320 Bacteria 14945
8 rootH2_10030171 3300003320 Bacteria 29533
9 rootL2_10041626 3300003322 Bacteria 9142
10 rootL2_10060203 3300003322 Bacteria 5852
11 rootL2_10080244 3300003322 Bacteria 3468
12 rootH1_10002072 3300003323 Bacteria 48496
13 rootH1_10007366 3300003323 Bacteria 4770
14 rootH1_10221730 3300003323 Bacteria 3488
15 Ga0055531_10000080 3300003794 Bacteria 103922
16 Ga0058863_11731868 3300004799 Bacteria 2664
17 Ga0065704_10002935 3300005289 Bacteria 4731
18 Ga0065704_10083008 3300005289 Bacteria 3486
19 Ga0065704_10101388 3300005289 Bacteria 2237
20 Ga0070658_10000016 3300005327 Bacteria 228551
21 Ga0070658_10082416 3300005327 Bacteria 2643
22 Ga0070683_100001937 3300005329 Bacteria 16209
23 Ga0070670_100076134 3300005331 Bacteria 2883
24 Ga0070680_100052921 3300005336 Bacteria 3313
25 Ga0070682_100000309 3300005337 Bacteria 33883
26 Ga0070682_100000583 3300005337 Bacteria 22371
27 Ga0070660_100079482 3300005339 Bacteria 2573
28 Ga0070669_100051600 3300005353 Bacteria 3007
29 Ga0070679_100001407 3300005530 Bacteria 21245
30 Ga0070684_100003261 3300005535 Bacteria 12156
31 Ga0068855_100000060 3300005563 Bacteria 133838
32 Ga0068855_100000302 3300005563 Bacteria 61501
33 Ga0068855_100034932 3300005563 Bacteria 5991
34 Ga0070664_100063662 3300005564 Bacteria 3144
35 Ga0068857_100016984 3300005577 Bacteria 6376
36 Ga0068856_100024222 3300005614 Bacteria 5906
37 Ga0068856_100048946 3300005614 Bacteria 4166
38 Ga0068856_100066144 3300005614 Bacteria 3572
39 Ga0068859_100019990 3300005617 Bacteria 6724
40 Ga0097620_100019989 3300006931 Bacteria 6724
41 Ga0105244_10000001 3300009036 Bacteria 1034899
42 Ga0105240_10000219 3300009093 Bacteria 115431
43 Ga0105247_10001480 3300009101 Bacteria 16885
44 Ga0105243_10000016 3300009148 Bacteria 235629
45 Ga0105243_10000173 3300009148 Bacteria 73881
46 Ga0105241_10026033 3300009174 Bacteria 4351
47 Ga0105241_10050131 3300009174 Bacteria 3181
48 Ga0105237_10001873 3300009545 Bacteria 26849
49 Ga0105237_10003237 3300009545 Bacteria 19484
50 Ga0105237_10012036 3300009545 Bacteria 9137
51 Ga0105237_10029798 3300009545 Bacteria 5543
52 Ga0105249_10010085 3300009553 Bacteria 8292
53 Ga0105239_10000008 3300010375 Bacteria 376925
54 Ga0105239_10000115 3300010375 Bacteria 113217
55 Ga0105239_10003817 3300010375 Bacteria 18316
56 Ga0105239_10012985 3300010375 Bacteria 9265
57 Ga0157373_10000019 3300013100 Bacteria 166579
58 Ga0157373_10001824 3300013100 Bacteria 16222
59 Ga0157373_10004246 3300013100 Bacteria 10816
60 Ga0157371_10000081 3300013102 Bacteria 151138
61 Ga0157371_10005406 3300013102 Bacteria 10783
62 Ga0157370_10008940 3300013104 Bacteria 10761
63 Ga0157370_10010534 3300013104 Bacteria 9735
64 Ga0157370_10079663 3300013104 Bacteria 3084
65 Ga0157369_10009164 3300013105 Bacteria 11322
66 Ga0157374_10039611 3300013296 Bacteria 4337
67 Ga0157378_10046979 3300013297 Unclassified 3838
68 Ga0163162_10001616 3300013306 Bacteria 21082
69 Ga0157372_10001065 3300013307 Bacteria 30006
70 Ga0157372_10005521 3300013307 Bacteria 13447
71 Ga0157372_10061910 3300013307 Bacteria 4191
72 Ga0157372_10110325 3300013307 Bacteria 3151
73 Ga0157375_10003213 3300013308 Bacteria 14185
74 Ga0157375_10009955 3300013308 Bacteria 8358
75 Ga0163163_10001534 3300014325 Bacteria 19476
76 Ga0163163_10033712 3300014325 Bacteria 4956
77 Ga0182008_10000015 3300014497 Bacteria 243121
78 Ga0182006_1000003 3300015261 Bacteria 826681
79 Ga0163161_10008144 3300017792 Bacteria 7248
80 Ga0207427_100091 3300025231 Bacteria 133410
81 Ga0209437_100026 3300025233 Bacteria 542698
82 Ga0209026_1001082 3300025250 Bacteria 13118
83 Ga0209233_1000111 3300025261 Bacteria 260262
84 Ga0209455_1002096 3300025272 Bacteria 7963
85 Ga0209675_1000057 3300025291 Bacteria 185467
86 Ga0209257_1000004 3300025304 Bacteria 1678347
87 Ga0207655_1000013 3300025728 Bacteria 637510
88 Ga0207710_10007988 3300025900 Bacteria 4473
89 Ga0207647_10000464 3300025904 Bacteria 32897
90 Ga0207705_10000031 3300025909 Bacteria 228571
91 Ga0207705_10068037 3300025909 Bacteria 2578
92 Ga0207695_10000048 3300025913 Bacteria 421800
93 Ga0207671_10002381 3300025914 Bacteria 20199
94 Ga0207671_10006370 3300025914 Bacteria 10527
95 Ga0207709_10000020 3300025935 Bacteria 392366
96 Ga0207709_10000218 3300025935 Bacteria 72387
97 Ga0207709_10067532 3300025935 Bacteria 2256
98 Ga0207689_10138935 3300025942 Bacteria 2001
99 Ga0207661_10004335 3300025944 Bacteria 9931
100 Ga0207661_10131475 3300025944 Bacteria 2144
101 Ga0207679_10008382 3300025945 Bacteria 6582
102 Ga0207667_10000033 3300025949 Bacteria 314353
103 Ga0207667_10001090 3300025949 Bacteria 34407
104 Ga0207712_10098785 3300025961 Bacteria 2166
105 Ga0207702_10017547 3300026078 Bacteria 5921
106 Ga0207702_10034894 3300026078 Bacteria 4207
107 Ga0265338_10038738 3300028800 Bacteria 4509
108 Ga0265327_10000577 3300031251 Bacteria 62128
109 Ga0307408_100000686 3300031548 Bacteria 27839
110 Ga0307408_100001806 3300031548 Bacteria 15613
111 Ga0307408_100003003 3300031548 Bacteria 11663
112 Ga0307412_10000032 3300031911 Bacteria 207098
113 Ga0307412_10000179 3300031911 Bacteria 44961
114 Ga0307412_10001473 3300031911 Bacteria 13067
115 Ga0307412_10003691 3300031911 Bacteria 8502
116 Ga0307416_100000031 3300032002 Bacteria 159059
117 Ga0307414_10000010 3300032004 Bacteria 357863
118 Ga0373941_0006399 3300035115 Bacteria 2837
119 Ga0395899_0000034 3300037312 Bacteria 302623
120 Ga0395899_0075130 3300037312 Bacteria 2468
121 Ga0395900_0000151 3300037418 Bacteria 116281
122 Ga0395898_0135803 3300037466 Bacteria 2355
123 Ga0395905_0001427 3300037471 Bacteria 28804
124 Ga0439465_0000717 3300041413 Bacteria 10210
125 Ga0439445_0007118 3300042004 Bacteria 2587
126 Ga0453683_0051101 3300044673 Bacteria 2590
127 Ga0495627_000002 3300046453 Bacteria 903861
128 Ga0495590_0006462 3300046457 Bacteria 4575
129 Ga0495638_0048385 3300046460 Bacteria 2662
130 Ga0495596_0001542 3300046500 Bacteria 13146
131 Ga0495606_0005376 3300046507 Bacteria 12284
132 Ga0495606_0006858 3300046507 Bacteria 10393
133 Ga0495610_0000006 3300046512 Bacteria 856822
134 Ga0495632_0003107 3300046519 Bacteria 12033
135 Ga0495643_0016950 3300046522 Bacteria 4270
136 Ga0495663_0000010 3300046525 Bacteria 161009
137 Ga0495654_0000006 3300046530 Bacteria 451432
138 Ga0495609_0000113 3300046538 Bacteria 94467
139 Ga0495633_0000003 3300046558 Bacteria 472476
140 Ga0495633_0001455 3300046558 Bacteria 18369
141 Ga0495625_0001290 3300046660 Bacteria 31476
142 Ga0495661_0000891 3300046665 Bacteria 27563
143 Ga0495661_0047251 3300046665 Bacteria 2622
144 Ga0495660_0010639 3300046810 Bacteria 5347
145 Ga0495672_0014022 3300047320 Bacteria 5507
146 Ga0495686_0000206 3300047472 Bacteria 110350
147 Ga0495686_0001801 3300047472 Bacteria 21688
148 Ga0496116_0000006 3300048919 Bacteria 811937
149 Ga0496117_0000027 3300048920 Bacteria 412234
150 Ga0496118_0000163 3300048921 Bacteria 119492
151 Ga0496119_0000006 3300048922 Bacteria 505999
152 Ga0496122_0000073 3300048925 Bacteria 222403
153 Ga0496122_0000163 3300048925 Bacteria 158337
154 Ga0496122_0000258 3300048925 Bacteria 119618
155 Ga0496122_0002696 3300048925 Bacteria 24693
156 Ga0496122_0006962 3300048925 Bacteria 12739
157 Ga0496123_0000346 3300048926 Bacteria 87043
158 Ga0496123_0009649 3300048926 Bacteria 8661
159 Ga0496124_0001995 3300048927 Bacteria 27806
160 Ga0496125_0001273 3300048928 Bacteria 37480
161 Ga0496125_0044971 3300048928 Bacteria 3724
162 Ga0496126_0006076 3300048929 Bacteria 13551
163 Ga0496126_0057998 3300048929 Bacteria 3492
164 Ga0501034_0000002 3300049571 Bacteria 565510
165 Ga0501067_0033159 3300049583 Unclassified 2866
166 Ga0501068_0076418 3300049584 Bacteria 2050
167 Ga0501073_0049455 3300049589 Bacteria 2948
168 Ga0501241_000036 3300049758 Bacteria 46988
169 Ga0501269_000032 3300049766 Bacteria 43612
170 Ga0500616_0004738 3300053153 Bacteria 9570
171 Ga0501084_0091149 3300054114 Unclassified 2559

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046810 Ga0495660_0010639 Ga0495660_0010639_3913_5283 451
2 3300025942 Ga0207689_10138935 Ga0207689_101389352 452
3 3300014325 Ga0163163_10033712 Ga0163163_100337121 467
4 3300047320 Ga0495672_0014022 Ga0495672_0014022_1165_2694 473
5 3300003214 JGI25165J46597_1001953 JGI25165J46597_10019536 483
6 3300025231 Ga0207427_100091 Ga0207427_10009192 483
7 3300025233 Ga0209437_100026 Ga0209437_100026199 483
8 3300025261 Ga0209233_1000111 Ga0209233_100011193 483
9 3300004799 Ga0058863_11731868 Ga0058863_117318683 484
10 3300005336 Ga0070680_100052921 Ga0070680_1000529213 484
11 3300005530 Ga0070679_100001407 Ga0070679_1000014073 484
12 3300037312 Ga0395899_0075130 Ga0395899_0075130_845_2377 487
13 3300037312 Ga0395899_0000034 Ga0395899_0000034_154892_156589 496
14 3300037466 Ga0395898_0135803 Ga0395898_0135803_753_2261 498
15 3300005614 Ga0068856_100024222 Ga0068856_1000242225 499
16 3300026078 Ga0207702_10017547 Ga0207702_100175472 499
17 3300003323 rootH1_10221730 rootH1_102217304 501
18 3300009174 Ga0105241_10026033 Ga0105241_100260333 505
19 3300009545 Ga0105237_10029798 Ga0105237_100297983 505
20 3300010375 Ga0105239_10003817 Ga0105239_100038172 505
21 3300003323 rootH1_10002072 rootH1_1000207237 506
22 3300013297 Ga0157378_10046979 Ga0157378_100469793 507
23 3300003320 rootH2_10030171 rootH2_100301712 508
24 3300013307 Ga0157372_10005521 Ga0157372_100055214 512
25 3300009093 Ga0105240_10000219 Ga0105240_1000021920 513
26 3300009545 Ga0105237_10001873 Ga0105237_100018738 513
27 3300010375 Ga0105239_10012985 Ga0105239_100129858 513
28 3300025913 Ga0207695_10000048 Ga0207695_10000048359 513
29 3300005327 Ga0070658_10082416 Ga0070658_100824162 514
30 3300025909 Ga0207705_10068037 Ga0207705_100680372 514
31 3300046665 Ga0495661_0000891 Ga0495661_0000891_25241_26896 514
32 3300010375 Ga0105239_10000115 Ga0105239_1000011534 515
33 3300037418 Ga0395900_0000151 Ga0395900_0000151_11296_12993 515
34 3300053153 Ga0500616_0004738 Ga0500616_0004738_7318_8979 516
35 3300001990 JGI24737J22298_10012892 JGI24737J22298_100128922 518
36 3300005577 Ga0068857_100016984 Ga0068857_1000169845 518
37 3300010375 Ga0105239_10000008 Ga0105239_1000000830 518
38 3300013100 Ga0157373_10004246 Ga0157373_100042464 518
39 3300013102 Ga0157371_10005406 Ga0157371_100054068 518
40 3300013307 Ga0157372_10001065 Ga0157372_1000106526 518
41 3300025904 Ga0207647_10000464 Ga0207647_100004647 518
42 3300005289 Ga0065704_10101388 Ga0065704_101013881 519
43 3300005564 Ga0070664_100063662 Ga0070664_1000636622 519
44 3300005614 Ga0068856_100066144 Ga0068856_1000661442 519
45 3300009148 Ga0105243_10000016 Ga0105243_1000001641 519
46 3300025935 Ga0207709_10000020 Ga0207709_10000020154 519
47 3300025945 Ga0207679_10008382 Ga0207679_100083823 519
48 3300005563 Ga0068855_100000060 Ga0068855_100000060110 520
49 3300005563 Ga0068855_100000302 Ga0068855_10000030213 520
50 3300013306 Ga0163162_10001616 Ga0163162_1000161614 520
51 3300025949 Ga0207667_10000033 Ga0207667_10000033179 520
52 3300025949 Ga0207667_10001090 Ga0207667_1000109013 520
53 3300037471 Ga0395905_0001427 Ga0395905_0001427_12075_13796 521
54 3300009545 Ga0105237_10012036 Ga0105237_100120367 523
55 3300025914 Ga0207671_10006370 Ga0207671_100063704 523
56 3300047472 Ga0495686_0001801 Ga0495686_0001801_7269_8969 523
57 3300013308 Ga0157375_10003213 Ga0157375_100032137 524
58 3300031911 Ga0307412_10003691 Ga0307412_100036914 524
59 3300042004 Ga0439445_0007118 Ga0439445_0007118_12_1658 524
60 3300048928 Ga0496125_0044971 Ga0496125_0044971_1239_2885 524
61 3300009101 Ga0105247_10001480 Ga0105247_1000148019 530
62 3300025900 Ga0207710_10007988 Ga0207710_100079882 530
63 3300031251 Ga0265327_10000577 Ga0265327_1000057752 530
64 3300005353 Ga0070669_100051600 Ga0070669_1000516003 532
65 3300005617 Ga0068859_100019990 Ga0068859_1000199905 532
66 3300006931 Ga0097620_100019989 Ga0097620_1000199895 532
67 3300009553 Ga0105249_10010085 Ga0105249_100100852 532
68 3300025961 Ga0207712_10098785 Ga0207712_100987852 532
69 3300049758 Ga0501241_000036 Ga0501241_000036_40115_41743 532
70 iso_pu_bacteria 2852623160 2852626551 532
71 iso_pu_bacteria 2884933994 2884934979 532
72 iso_pu_bacteria 2896317667 2896320420 532
73 iso_pu_bacteria 3003233435 3003233926 532
74 3300013100 Ga0157373_10001824 Ga0157373_100018247 533
75 3300013308 Ga0157375_10009955 Ga0157375_100099558 533
76 3300049571 Ga0501034_0000002 Ga0501034_0000002_512064_513695 533
77 iso_pu_bacteria 2738541273 2738699892 533
78 iso_pu_bacteria 2738543014 2739253641 533
79 iso_pu_bacteria 2896344016 2896346705 533
80 3300005331 Ga0070670_100076134 Ga0070670_1000761342 534
81 3300013296 Ga0157374_10039611 Ga0157374_100396112 534
82 3300014325 Ga0163163_10001534 Ga0163163_100015347 534
83 iso_pu_bacteria 2511231000 2511232545 534
84 iso_pu_bacteria 2523533629 2524004414 534
85 iso_pu_bacteria 2582581278 2585143008 534
86 iso_pu_bacteria 2582581281 2585158665 534
87 iso_pu_bacteria 2582581282 2585162952 534
88 iso_pu_bacteria 2582581873 2585424459 534
89 iso_pu_bacteria 2585428045 2587680234 534
90 iso_pu_bacteria 2585428060 2587745937 534
91 iso_pu_bacteria 2585428095 2587867644 534
92 iso_pu_bacteria 2585428115 2587944082 534
93 iso_pu_bacteria 2585428182 2588210125 534
94 iso_pu_bacteria 2585428183 2588214670 534
95 iso_pu_bacteria 2585428184 2588217902 534
96 iso_pu_bacteria 2585428185 2588222898 534
97 iso_pu_bacteria 2585428187 2588233070 534
98 iso_pu_bacteria 2588253712 2588444319 534
99 iso_pu_bacteria 2588254255 2590601365 534
100 iso_pu_bacteria 2588254257 2590613307 534
101 iso_pu_bacteria 2728369107 2729199857 534
102 iso_pu_bacteria 2739367874 2740058852 534
103 iso_pu_bacteria 2765235839 2765574030 534
104 iso_pu_bacteria 2772190705 2772606329 534
105 iso_pu_bacteria 2775506739 2775672086 534
106 iso_pu_bacteria 2816332188 2816874244 534
107 iso_pu_bacteria 2842083920 2842086085 534
108 iso_pu_bacteria 2871720351 2871720359 534
109 iso_pu_bacteria 2887375801 2887377331 534
110 iso_pu_bacteria 2889290771 2889295475 534
111 iso_pu_bacteria 2890737413 2890738502 534
112 iso_pu_bacteria 2905999023 2905999857 534
113 iso_pu_bacteria 2919097161 2919100600 534
114 iso_pu_bacteria 2919399522 2919399532 534
115 iso_pu_bacteria 2945924605 2945926144 534
116 iso_pu_bacteria 2946019816 2946022489 534
117 iso_pu_bacteria 2977243572 2977245108 534
118 iso_pu_bacteria 2984572630 2984575065 534
119 iso_pu_bacteria 2984606641 2984608516 534
120 iso_pu_bacteria 2993372514 2993374514 534
121 iso_pu_bacteria 2993480792 2993481398 534
122 3300005327 Ga0070658_10000016 Ga0070658_1000001683 535
123 3300005563 Ga0068855_100034932 Ga0068855_1000349326 535
124 3300005614 Ga0068856_100048946 Ga0068856_1000489462 535
125 3300009174 Ga0105241_10050131 Ga0105241_100501313 535
126 3300009545 Ga0105237_10003237 Ga0105237_100032379 535
127 3300013104 Ga0157370_10079663 Ga0157370_100796632 535
128 3300013307 Ga0157372_10061910 Ga0157372_100619102 535
129 3300025250 Ga0209026_1001082 Ga0209026_10010824 535
130 3300025272 Ga0209455_1002096 Ga0209455_10020964 535
131 3300025909 Ga0207705_10000031 Ga0207705_1000003183 535
132 3300025914 Ga0207671_10002381 Ga0207671_100023814 535
133 3300025944 Ga0207661_10004335 Ga0207661_1000433510 535
134 3300025944 Ga0207661_10131475 Ga0207661_101314752 535
135 3300026078 Ga0207702_10034894 Ga0207702_100348942 535
136 3300031548 Ga0307408_100000686 Ga0307408_10000068620 535
137 3300035115 Ga0373941_0006399 Ga0373941_0006399_481_2232 535
138 3300046665 Ga0495661_0047251 Ga0495661_0047251_940_2589 535
139 3300003322 rootL2_10060203 rootL2_100602031 536
140 3300003323 rootH1_10007366 rootH1_100073663 536
141 3300005289 Ga0065704_10002935 Ga0065704_100029354 536
142 3300005289 Ga0065704_10083008 Ga0065704_100830083 536
143 3300005329 Ga0070683_100001937 Ga0070683_10000193715 536
144 3300005337 Ga0070682_100000309 Ga0070682_10000030922 536
145 3300005337 Ga0070682_100000583 Ga0070682_10000058319 536
146 3300005339 Ga0070660_100079482 Ga0070660_1000794821 536
147 3300005535 Ga0070684_100003261 Ga0070684_10000326113 536
148 3300009036 Ga0105244_10000001 Ga0105244_10000001209 536
149 3300009148 Ga0105243_10000173 Ga0105243_1000017334 536
150 3300013100 Ga0157373_10000019 Ga0157373_1000001932 536
151 3300013102 Ga0157371_10000081 Ga0157371_1000008114 536
152 3300013104 Ga0157370_10008940 Ga0157370_100089403 536
153 3300013104 Ga0157370_10010534 Ga0157370_100105346 536
154 3300013105 Ga0157369_10009164 Ga0157369_100091648 536
155 3300014497 Ga0182008_10000015 Ga0182008_10000015114 536
156 3300015261 Ga0182006_1000003 Ga0182006_1000003155 536
157 3300017792 Ga0163161_10008144 Ga0163161_100081441 536
158 3300025291 Ga0209675_1000057 Ga0209675_100005737 536
159 3300025728 Ga0207655_1000013 Ga0207655_1000013335 536
160 3300025935 Ga0207709_10000218 Ga0207709_1000021850 536
161 3300025935 Ga0207709_10067532 Ga0207709_100675322 536
162 3300028800 Ga0265338_10038738 Ga0265338_100387383 536
163 3300031548 Ga0307408_100003003 Ga0307408_1000030034 536
164 3300031911 Ga0307412_10000032 Ga0307412_10000032199 536
165 3300031911 Ga0307412_10000179 Ga0307412_1000017928 536
166 3300032002 Ga0307416_100000031 Ga0307416_10000003149 536
167 3300032004 Ga0307414_10000010 Ga0307414_10000010217 536
168 3300041413 Ga0439465_0000717 Ga0439465_0000717_7567_9213 536
169 3300046453 Ga0495627_000002 Ga0495627_000002_688495_690141 536
170 3300046457 Ga0495590_0006462 Ga0495590_0006462_2848_4494 536
171 3300046460 Ga0495638_0048385 Ga0495638_0048385_494_2140 536
172 3300046500 Ga0495596_0001542 Ga0495596_0001542_8093_9739 536
173 3300046507 Ga0495606_0005376 Ga0495606_0005376_4226_5872 536
174 3300046507 Ga0495606_0006858 Ga0495606_0006858_7032_8678 536
175 3300046512 Ga0495610_0000006 Ga0495610_0000006_714336_715982 536
176 3300046519 Ga0495632_0003107 Ga0495632_0003107_5439_7085 536
177 3300046522 Ga0495643_0016950 Ga0495643_0016950_572_2218 536
178 3300046525 Ga0495663_0000010 Ga0495663_0000010_34913_36559 536
179 3300046530 Ga0495654_0000006 Ga0495654_0000006_289551_291197 536
180 3300046538 Ga0495609_0000113 Ga0495609_0000113_50440_52125 536
181 3300046558 Ga0495633_0000003 Ga0495633_0000003_213139_214785 536
182 3300046558 Ga0495633_0001455 Ga0495633_0001455_4270_6045 536
183 3300046660 Ga0495625_0001290 Ga0495625_0001290_20778_22424 536
184 3300047472 Ga0495686_0000206 Ga0495686_0000206_105535_107181 536
185 3300048919 Ga0496116_0000006 Ga0496116_0000006_267805_269451 536
186 3300048920 Ga0496117_0000027 Ga0496117_0000027_87392_89038 536
187 3300048921 Ga0496118_0000163 Ga0496118_0000163_27407_29053 536
188 3300048922 Ga0496119_0000006 Ga0496119_0000006_501056_502702 536
189 3300048925 Ga0496122_0000073 Ga0496122_0000073_133986_135632 536
190 3300048925 Ga0496122_0000163 Ga0496122_0000163_62257_63903 536
191 3300048925 Ga0496122_0000258 Ga0496122_0000258_34165_35811 536
192 3300048925 Ga0496122_0002696 Ga0496122_0002696_7119_8765 536
193 3300048925 Ga0496122_0006962 Ga0496122_0006962_7712_9358 536
194 3300048926 Ga0496123_0000346 Ga0496123_0000346_42216_43862 536
195 3300048926 Ga0496123_0009649 Ga0496123_0009649_3327_4973 536
196 3300048927 Ga0496124_0001995 Ga0496124_0001995_4280_5926 536
197 3300048928 Ga0496125_0001273 Ga0496125_0001273_4679_6325 536
198 3300048929 Ga0496126_0006076 Ga0496126_0006076_4303_5949 536
199 3300048929 Ga0496126_0057998 Ga0496126_0057998_776_2422 536
200 3300049766 Ga0501269_000032 Ga0501269_000032_37437_39083 536
201 iso_pu_bacteria 2585428061 2587751296 536
202 iso_pu_bacteria 2751185877 2753674395 536
203 3300003316 rootH1_10066542 rootH1_100665423 537
204 3300013307 Ga0157372_10110325 Ga0157372_101103252 537
205 3300031548 Ga0307408_100001806 Ga0307408_1000018068 537
206 3300031911 Ga0307412_10001473 Ga0307412_1000147315 537
207 3300044673 Ga0453683_0051101 Ga0453683_0051101_621_2279 537
208 3300049583 Ga0501067_0033159 Ga0501067_0033159_466_2121 537
209 3300049584 Ga0501068_0076418 Ga0501068_0076418_174_1829 537
210 3300049589 Ga0501073_0049455 Ga0501073_0049455_62_1717 537
211 3300054114 Ga0501084_0091149 Ga0501084_0091149_531_2186 537
212 iso_pu_bacteria 2884791551 2884793311 539
213 iso_pu_bacteria 2929921140 2929926572 539
214 3300003320 rootH2_10006910 rootH2_100069105 541
215 3300003322 rootL2_10041626 rootL2_100416265 541
216 3300003794 Ga0055531_10000080 Ga0055531_1000008025 541
217 3300025304 Ga0209257_1000004 Ga0209257_100000424 541
218 3300003316 rootH1_10108610 rootH1_101086102 542
219 3300003322 rootL2_10080244 rootL2_100802442 542
220 3300001979 JGI24740J21852_10000578 JGI24740J21852_100005783 543
221 3300002738 JGI25154J39366_1000227 JGI25154J39366_100022726 543

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01663

Phosphodiest

Type I phosphodiesterase / nucleotide pyrophosphatase

96

558

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
5tj3-assembly1.cif.gz_A crystal structure of wild type alkaline phosphatase pafa to 1.7a resolution 0.9905 29 541
5too-assembly1.cif.gz_A crystal structure of alkaline phosphatase pafa t79s, n100a, k162a, r164a mutant 0.9859 29 539
5tj3-assembly1.cif.gz_A crystal structure of wild type alkaline phosphatase pafa to 1.7a resolution 0.9754 29 541
5too-assembly1.cif.gz_A crystal structure of alkaline phosphatase pafa t79s, n100a, k162a, r164a mutant 0.9726 29 539
3q3q-assembly1.cif.gz_A-2 crystal structure of spap: an novel alkaline phosphatase from bacterium sphingomonas sp. strain bsar-1 0.849 30 543
ID Description Score Start End Superfamily
5tooA01 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.985 29 539 3.40.720.10
5tooA01 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.9681 29 539 3.40.720.10
5tooA02 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2; 0.9368 364 474 3.30.1360.150
5tooA02 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2; 0.9131 364 474 3.30.1360.150
5xwiA01 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.8547 30 543 3.40.720.10
ID Description Score Start End GO Terms
AF-A0A3D6CKC9-F1-model_v4 Alkaline phosphatase 0.9884 103 368
AF-A0A3C0RZA4-F1-model_v4 Alkaline phosphatase family protein 0.9879 37 542 GO:0004035
AF-A0A4Q3VTN6-F1-model_v4 Alkaline phosphatase family protein 0.9878 22 222
AF-A0A4V6JN88-F1-model_v4 deleted 0.9875 139 539
AF-A0A1H7SMG3-F1-model_v4 Type I phosphodiesterase / nucleotide pyrophosphatase 0.9861 37 539 GO:0004035
GO:0006796

Feature Viewer

pLDDT pTM Quality
92.49 0.91 High
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Predicted Structure (AlphaFold2)

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