F332238

General Info

Members Datasets Scaffolds Average Seq Length
220 114 440 400

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10093339|Ga0157370_100933392
Length 456
Sequence MPQPPSVKRARGHVADRTDRGAPQSLKAAPLPEPAHLLRCGDGTAQLTRLEEVRLGRRLPVWLLGLANVPLGITGAIALFVAPQVLASRHVPETTIADITTLGLSSTIFFVIVAPMLDVRFSRRTYAISMSIAAAALTFIAVLNFSSVILLGAWLFLAMLCANLNSSAIGGWFGSVLPKEYDAPLGAWFTVANVAGFGITSIIGILLIHHAPPLVAAVVLGSLNLLPLLIFMWVHPPTESRQRAAETFARFGREVVQLARGREVRRLLLLLALPCASFALTNTLGGLGGDYHASEKLIAFIGGVGVTLAGVAGSLSVPILSRRAPLLKVYLGIGFIGGLSTLSLLVLGHTPAVFVYAFVAQNVAQSAALSTGNALILSSIGKNNPLASTQFALLTAAMSAPITYMQWVDGQAYGAGGLTRMYATDGGLDLLACTVMTLLFVYWARRSRGDPVAARA

Samples

Sample ID Description Type Environment
1 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002073 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
93 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
94 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
101 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
102 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
108 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
113 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
114 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.91
Nodule 0
Rhizoplane 2.27
Rhizosphere 95.91
Stem 0
Stem Tuber 0
Unclassified 5.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157370_10093339 3300013104 Bacteria 2824
2 JGI24741J21665_1006532 3300001915 Bacteria 2336
3 JGI24740J21852_10033095 3300001979 Bacteria 1646
4 JGI24735J21928_10018253 3300002067 Bacteria 2163
5 JGI24745J21846_1000484 3300002073 Bacteria 3516
6 Ga0070658_10081061 3300005327 Bacteria 2665
7 Ga0070658_10092930 3300005327 Bacteria 2488
8 Ga0070658_10151903 3300005327 Bacteria 1939
9 Ga0070658_10155398 3300005327 Bacteria 1917
10 Ga0070658_10181470 3300005327 Bacteria 1771
11 Ga0070683_100125216 3300005329 Bacteria 2429
12 Ga0070670_100043484 3300005331 Bacteria 3861
13 Ga0068869_100060679 3300005334 Bacteria 2772
14 Ga0068869_100063457 3300005334 Bacteria 2714
15 Ga0070680_100018903 3300005336 Bacteria 5451
16 Ga0070680_100250262 3300005336 Bacteria 1498
17 Ga0068868_100186343 3300005338 Bacteria 1724
18 Ga0070660_100009334 3300005339 Bacteria 6894
19 Ga0070660_100009674 3300005339 Bacteria 6790
20 Ga0070661_100009143 3300005344 Bacteria 6848
21 Ga0070661_100038055 3300005344 Bacteria 3501
22 Ga0070692_10021171 3300005345 Bacteria 3161
23 Ga0070675_100072952 3300005354 Bacteria 2849
24 Ga0070671_100081379 3300005355 Bacteria 2708
25 Ga0070673_100073609 3300005364 Bacteria 2750
26 Ga0070673_100242776 3300005364 Bacteria 1567
27 Ga0070659_100033513 3300005366 Bacteria 3989
28 Ga0070659_100043016 3300005366 Bacteria 3532
29 Ga0070659_100048402 3300005366 Bacteria 3339
30 Ga0070667_100108268 3300005367 Bacteria 2407
31 Ga0070714_100007541 3300005435 Bacteria 8469
32 Ga0070713_100005958 3300005436 Bacteria 8384
33 Ga0070713_100225962 3300005436 Unclassified 1700
34 Ga0070663_100020232 3300005455 Bacteria 4403
35 Ga0070663_100061153 3300005455 Bacteria 2711
36 Ga0070663_100158375 3300005455 Bacteria 1741
37 Ga0070662_100020951 3300005457 Bacteria 4459
38 Ga0070681_10020736 3300005458 Bacteria 6583
39 Ga0070681_10156022 3300005458 Bacteria 2207
40 Ga0070679_100142715 3300005530 Bacteria 2373
41 Ga0070679_100209445 3300005530 Bacteria 1914
42 Ga0068853_100123023 3300005539 Bacteria 2316
43 Ga0068853_100199241 3300005539 Bacteria 1822
44 Ga0070672_100044808 3300005543 Bacteria 3418
45 Ga0068855_100001630 3300005563 Bacteria 28165
46 Ga0068855_100111736 3300005563 Bacteria 3137
47 Ga0068855_100163666 3300005563 Bacteria 2523
48 Ga0070664_100052344 3300005564 Bacteria 3458
49 Ga0070664_100135369 3300005564 Bacteria 2166
50 Ga0068857_100010199 3300005577 Bacteria 8167
51 Ga0068854_100011748 3300005578 Bacteria 5715
52 Ga0068854_100110511 3300005578 Bacteria 2073
53 Ga0068856_100044841 3300005614 Bacteria 4352
54 Ga0068856_100078039 3300005614 Bacteria 3282
55 Ga0068856_100082124 3300005614 Bacteria 3198
56 Ga0068856_100186801 3300005614 Bacteria 2086
57 Ga0068856_100207472 3300005614 Unclassified 1974
58 Ga0068852_100003435 3300005616 Bacteria 11067
59 Ga0068852_100004940 3300005616 Bacteria 9471
60 Ga0068852_100083553 3300005616 Bacteria 2839
61 Ga0068859_100272902 3300005617 Bacteria 1783
62 Ga0068851_10021037 3300005834 Bacteria 3164
63 Ga0068851_10065596 3300005834 Unclassified 1869
64 Ga0068858_100011259 3300005842 Bacteria 8452
65 Ga0068862_100099474 3300005844 Bacteria 2542
66 Ga0070712_100013969 3300006175 Bacteria 5145
67 Ga0097621_100262622 3300006237 Unclassified 1515
68 Ga0068871_100079874 3300006358 Bacteria 2707
69 Ga0097620_100272923 3300006931 Bacteria 1783
70 Ga0105240_10027673 3300009093 Bacteria 7420
71 Ga0105240_10032336 3300009093 Bacteria 6775
72 Ga0105245_10070719 3300009098 Unclassified 3167
73 Ga0105241_10108403 3300009174 Bacteria 2220
74 Ga0105242_10021016 3300009176 Bacteria 5120
75 Ga0105248_10176465 3300009177 Unclassified 2408
76 Ga0105248_10306989 3300009177 Bacteria 1787
77 Ga0105237_10071029 3300009545 Bacteria 3477
78 Ga0105238_10015290 3300009551 Bacteria 7773
79 Ga0105238_10108873 3300009551 Bacteria 2752
80 Ga0157373_10057623 3300013100 Bacteria 2755
81 Ga0157373_10068076 3300013100 Bacteria 2517
82 Ga0157373_10115306 3300013100 Bacteria 1889
83 Ga0157371_10028254 3300013102 Bacteria 4063
84 Ga0157371_10056913 3300013102 Bacteria 2773
85 Ga0157371_10068901 3300013102 Bacteria 2505
86 Ga0157371_10086935 3300013102 Bacteria 2214
87 Ga0157370_10089360 3300013104 Bacteria 2894
88 Ga0157370_10159478 3300013104 Unclassified 2099
89 Ga0157370_10185717 3300013104 Bacteria 1930
90 Ga0157369_10037920 3300013105 Bacteria 5273
91 Ga0157369_10054389 3300013105 Bacteria 4323
92 Ga0157369_10113356 3300013105 Bacteria 2880
93 Ga0157369_10153836 3300013105 Bacteria 2430
94 Ga0157369_10187158 3300013105 Bacteria 2177
95 Ga0157369_10292148 3300013105 Bacteria 1697
96 Ga0163162_10198447 3300013306 Bacteria 2135
97 Ga0157372_10132820 3300013307 Bacteria 2865
98 Ga0157372_10219470 3300013307 Bacteria 2204
99 Ga0157372_10251307 3300013307 Unclassified 2052
100 Ga0157372_10282267 3300013307 Bacteria 1931
101 Ga0157375_10259010 3300013308 Bacteria 1901
102 Ga0157375_10357550 3300013308 Bacteria 1626
103 Ga0209026_1009543 3300025250 Bacteria 1897
104 Ga0207688_10031465 3300025901 Bacteria 2929
105 Ga0207647_10001330 3300025904 Bacteria 18984
106 Ga0207647_10002821 3300025904 Bacteria 13114
107 Ga0207647_10052578 3300025904 Bacteria 2514
108 Ga0207705_10003111 3300025909 Bacteria 12661
109 Ga0207705_10003959 3300025909 Bacteria 11261
110 Ga0207705_10086881 3300025909 Bacteria 2286
111 Ga0207705_10217482 3300025909 Bacteria 1450
112 Ga0207654_10077261 3300025911 Bacteria 1995
113 Ga0207707_10028195 3300025912 Bacteria 4907
114 Ga0207707_10117926 3300025912 Bacteria 2320
115 Ga0207695_10049794 3300025913 Bacteria 4412
116 Ga0207695_10163842 3300025913 Bacteria 2153
117 Ga0207695_10193378 3300025913 Bacteria 1951
118 Ga0207693_10040600 3300025915 Bacteria 3665
119 Ga0207660_10152824 3300025917 Bacteria 1775
120 Ga0207660_10197918 3300025917 Unclassified 1568
121 Ga0207657_10004547 3300025919 Bacteria 14659
122 Ga0207657_10017062 3300025919 Bacteria 6983
123 Ga0207657_10035930 3300025919 Bacteria 4438
124 Ga0207657_10067179 3300025919 Bacteria 3049
125 Ga0207657_10074867 3300025919 Bacteria 2858
126 Ga0207657_10170866 3300025919 Bacteria 1761
127 Ga0207649_10075561 3300025920 Bacteria 2166
128 Ga0207649_10094913 3300025920 Bacteria 1961
129 Ga0207649_10104450 3300025920 Bacteria 1881
130 Ga0207652_10161755 3300025921 Bacteria 2007
131 Ga0207652_10249446 3300025921 Bacteria 1601
132 Ga0207694_10007585 3300025924 Bacteria 8225
133 Ga0207659_10153254 3300025926 Bacteria 1802
134 Ga0207700_10036560 3300025928 Bacteria 3549
135 Ga0207664_10038332 3300025929 Bacteria 3715
136 Ga0207664_10180805 3300025929 Bacteria 1810
137 Ga0207690_10007538 3300025932 Bacteria 6457
138 Ga0207690_10055329 3300025932 Bacteria 2672
139 Ga0207690_10094807 3300025932 Bacteria 2118
140 Ga0207706_10029041 3300025933 Bacteria 4938
141 Ga0207706_10132378 3300025933 Bacteria 2193
142 Ga0207686_10129798 3300025934 Bacteria 1727
143 Ga0207691_10055740 3300025940 Bacteria 3602
144 Ga0207711_10195545 3300025941 Bacteria 1844
145 Ga0207711_10206586 3300025941 Bacteria 1793
146 Ga0207689_10059444 3300025942 Unclassified 3144
147 Ga0207689_10075384 3300025942 Bacteria 2773
148 Ga0207661_10041692 3300025944 Bacteria 3614
149 Ga0207661_10210991 3300025944 Bacteria 1712
150 Ga0207679_10037506 3300025945 Bacteria 3446
151 Ga0207667_10001174 3300025949 Bacteria 32915
152 Ga0207667_10074231 3300025949 Bacteria 3533
153 Ga0207667_10111945 3300025949 Bacteria 2815
154 Ga0207668_10078616 3300025972 Bacteria 2383
155 Ga0207640_10058895 3300025981 Bacteria 2532
156 Ga0207640_10084555 3300025981 Bacteria 2179
157 Ga0207677_10045280 3300026023 Bacteria 2937
158 Ga0207639_10011746 3300026041 Bacteria 6090
159 Ga0207639_10111946 3300026041 Bacteria 2226
160 Ga0207678_10017007 3300026067 Bacteria 6385
161 Ga0207678_10097158 3300026067 Bacteria 2517
162 Ga0207678_10150234 3300026067 Bacteria 1988
163 Ga0207702_10035721 3300026078 Bacteria 4154
164 Ga0207702_10045215 3300026078 Bacteria 3704
165 Ga0207702_10248550 3300026078 Bacteria 1669
166 Ga0207674_10026169 3300026116 Bacteria 6206
167 Ga0207698_10001637 3300026142 Bacteria 13046
168 Ga0207698_10004475 3300026142 Bacteria 8525
169 Ga0268265_10156259 3300028380 Bacteria 1930
170 Ga0265338_10064013 3300028800 Bacteria 3202
171 Ga0265316_10048379 3300031344 Bacteria 3357
172 Ga0265314_10042851 3300031711 Bacteria 3224
173 Ga0373954_0094272 3300035118 Bacteria 1440
174 Ga0373956_0092264 3300035119 Bacteria 1398
175 Ga0373955_0018812 3300035172 Bacteria 3443
176 Ga0395899_0019382 3300037312 Bacteria 5169
177 Ga0395899_0021224 3300037312 Bacteria 4926
178 Ga0395899_0056500 3300037312 Unclassified 2900
179 Ga0395899_0145267 3300037312 Bacteria 1685
180 Ga0395900_0001294 3300037418 Bacteria 30486
181 Ga0395900_0021174 3300037418 Bacteria 6646
182 Ga0395900_0023245 3300037418 Bacteria 6344
183 Ga0395900_0068531 3300037418 Bacteria 3646
184 Ga0395900_0121811 3300037418 Bacteria 2676
185 Ga0395900_0311384 3300037418 Bacteria 1557
186 Ga0395898_0031914 3300037466 Bacteria 5260
187 Ga0395898_0074913 3300037466 Bacteria 3269
188 Ga0395898_0455306 3300037466 Unclassified 1218
189 Ga0395905_0001983 3300037471 Bacteria 23389
190 Ga0395905_0003105 3300037471 Bacteria 17939
191 Ga0395905_0014918 3300037471 Bacteria 7412
192 Ga0395905_0038090 3300037471 Bacteria 4511
193 Ga0395905_0044665 3300037471 Bacteria 4157
194 Ga0395905_0046194 3300037471 Bacteria 4083
195 Ga0395905_0056339 3300037471 Bacteria 3677
196 Ga0395905_0069265 3300037471 Bacteria 3304
197 Ga0395905_0249607 3300037471 Bacteria 1658
198 Ga0395901_0004724 3300038443 Bacteria 13753
199 Ga0395901_0033324 3300038443 Bacteria 5318
200 Ga0395901_0101767 3300038443 Bacteria 3015
201 Ga0395901_0168362 3300038443 Bacteria 2299
202 Ga0395901_0213761 3300038443 Bacteria 2017
203 Ga0466966_0000077 3300044684 Bacteria 62463
204 Ga0466966_0013298 3300044684 Bacteria 5450
205 Ga0466966_0044482 3300044684 Bacteria 2842
206 Ga0466961_0025817 3300044693 Bacteria 3776
207 Ga0466963_0005295 3300044694 Bacteria 7538
208 Ga0466957_0089634 3300044842 Bacteria 1925
209 Ga0495613_0008634 3300046689 Bacteria 7559
210 Ga0495602_0110575 3300048088 Bacteria 2233
211 Ga0496107_0076419 3300048910 Bacteria 2439
212 Ga0496107_0093941 3300048910 Unclassified 2194
213 Ga0496110_0340106 3300048913 Bacteria 1367
214 Ga0496111_0033725 3300048914 Bacteria 3653
215 Ga0496114_0000206 3300048917 Bacteria 42865
216 Ga0496121_0000017 3300048924 Bacteria 546415
217 Ga0501047_0000742 3300049581 Bacteria 33985
218 Ga0500636_0027532 3300053177 Bacteria 3359
219 Ga0500611_002495 3300053727 Bacteria 2215
220 Ga0466962_0039016 3300061719 Bacteria 2274
221 Ga0157370_10093339
222 JGI24741J21665_1006532
223 JGI24740J21852_10033095
224 JGI24735J21928_10018253
225 JGI24745J21846_1000484
226 Ga0070658_10081061
227 Ga0070658_10092930
228 Ga0070658_10151903
229 Ga0070658_10155398
230 Ga0070658_10181470
231 Ga0070683_100125216
232 Ga0070670_100043484
233 Ga0068869_100060679
234 Ga0068869_100063457
235 Ga0070680_100018903
236 Ga0070680_100250262
237 Ga0068868_100186343
238 Ga0070660_100009334
239 Ga0070660_100009674
240 Ga0070661_100009143
241 Ga0070661_100038055
242 Ga0070692_10021171
243 Ga0070675_100072952
244 Ga0070671_100081379
245 Ga0070673_100073609
246 Ga0070673_100242776
247 Ga0070659_100033513
248 Ga0070659_100043016
249 Ga0070659_100048402
250 Ga0070667_100108268
251 Ga0070714_100007541
252 Ga0070713_100005958
253 Ga0070713_100225962
254 Ga0070663_100020232
255 Ga0070663_100061153
256 Ga0070663_100158375
257 Ga0070662_100020951
258 Ga0070681_10020736
259 Ga0070681_10156022
260 Ga0070679_100142715
261 Ga0070679_100209445
262 Ga0068853_100123023
263 Ga0068853_100199241
264 Ga0070672_100044808
265 Ga0068855_100001630
266 Ga0068855_100111736
267 Ga0068855_100163666
268 Ga0070664_100052344
269 Ga0070664_100135369
270 Ga0068857_100010199
271 Ga0068854_100011748
272 Ga0068854_100110511
273 Ga0068856_100044841
274 Ga0068856_100078039
275 Ga0068856_100082124
276 Ga0068856_100186801
277 Ga0068856_100207472
278 Ga0068852_100003435
279 Ga0068852_100004940
280 Ga0068852_100083553
281 Ga0068859_100272902
282 Ga0068851_10021037
283 Ga0068851_10065596
284 Ga0068858_100011259
285 Ga0068862_100099474
286 Ga0070712_100013969
287 Ga0097621_100262622
288 Ga0068871_100079874
289 Ga0097620_100272923
290 Ga0105240_10027673
291 Ga0105240_10032336
292 Ga0105245_10070719
293 Ga0105241_10108403
294 Ga0105242_10021016
295 Ga0105248_10176465
296 Ga0105248_10306989
297 Ga0105237_10071029
298 Ga0105238_10015290
299 Ga0105238_10108873
300 Ga0157373_10057623
301 Ga0157373_10068076
302 Ga0157373_10115306
303 Ga0157371_10028254
304 Ga0157371_10056913
305 Ga0157371_10068901
306 Ga0157371_10086935
307 Ga0157370_10089360
308 Ga0157370_10159478
309 Ga0157370_10185717
310 Ga0157369_10037920
311 Ga0157369_10054389
312 Ga0157369_10113356
313 Ga0157369_10153836
314 Ga0157369_10187158
315 Ga0157369_10292148
316 Ga0163162_10198447
317 Ga0157372_10132820
318 Ga0157372_10219470
319 Ga0157372_10251307
320 Ga0157372_10282267
321 Ga0157375_10259010
322 Ga0157375_10357550
323 Ga0209026_1009543
324 Ga0207688_10031465
325 Ga0207647_10001330
326 Ga0207647_10002821
327 Ga0207647_10052578
328 Ga0207705_10003111
329 Ga0207705_10003959
330 Ga0207705_10086881
331 Ga0207705_10217482
332 Ga0207654_10077261
333 Ga0207707_10028195
334 Ga0207707_10117926
335 Ga0207695_10049794
336 Ga0207695_10163842
337 Ga0207695_10193378
338 Ga0207693_10040600
339 Ga0207660_10152824
340 Ga0207660_10197918
341 Ga0207657_10004547
342 Ga0207657_10017062
343 Ga0207657_10035930
344 Ga0207657_10067179
345 Ga0207657_10074867
346 Ga0207657_10170866
347 Ga0207649_10075561
348 Ga0207649_10094913
349 Ga0207649_10104450
350 Ga0207652_10161755
351 Ga0207652_10249446
352 Ga0207694_10007585
353 Ga0207659_10153254
354 Ga0207700_10036560
355 Ga0207664_10038332
356 Ga0207664_10180805
357 Ga0207690_10007538
358 Ga0207690_10055329
359 Ga0207690_10094807
360 Ga0207706_10029041
361 Ga0207706_10132378
362 Ga0207686_10129798
363 Ga0207691_10055740
364 Ga0207711_10195545
365 Ga0207711_10206586
366 Ga0207689_10059444
367 Ga0207689_10075384
368 Ga0207661_10041692
369 Ga0207661_10210991
370 Ga0207679_10037506
371 Ga0207667_10001174
372 Ga0207667_10074231
373 Ga0207667_10111945
374 Ga0207668_10078616
375 Ga0207640_10058895
376 Ga0207640_10084555
377 Ga0207677_10045280
378 Ga0207639_10011746
379 Ga0207639_10111946
380 Ga0207678_10017007
381 Ga0207678_10097158
382 Ga0207678_10150234
383 Ga0207702_10035721
384 Ga0207702_10045215
385 Ga0207702_10248550
386 Ga0207674_10026169
387 Ga0207698_10001637
388 Ga0207698_10004475
389 Ga0268265_10156259
390 Ga0265338_10064013
391 Ga0265316_10048379
392 Ga0265314_10042851
393 Ga0373954_0094272
394 Ga0373956_0092264
395 Ga0373955_0018812
396 Ga0395899_0019382
397 Ga0395899_0021224
398 Ga0395899_0056500
399 Ga0395899_0145267
400 Ga0395900_0001294
401 Ga0395900_0021174
402 Ga0395900_0023245
403 Ga0395900_0068531
404 Ga0395900_0121811
405 Ga0395900_0311384
406 Ga0395898_0031914
407 Ga0395898_0074913
408 Ga0395898_0455306
409 Ga0395905_0001983
410 Ga0395905_0003105
411 Ga0395905_0014918
412 Ga0395905_0038090
413 Ga0395905_0044665
414 Ga0395905_0046194
415 Ga0395905_0056339
416 Ga0395905_0069265
417 Ga0395905_0249607
418 Ga0395901_0004724
419 Ga0395901_0033324
420 Ga0395901_0101767
421 Ga0395901_0168362
422 Ga0395901_0213761
423 Ga0466966_0000077
424 Ga0466966_0013298
425 Ga0466966_0044482
426 Ga0466961_0025817
427 Ga0466963_0005295
428 Ga0466957_0089634
429 Ga0495613_0008634
430 Ga0495602_0110575
431 Ga0496107_0076419
432 Ga0496107_0093941
433 Ga0496110_0340106
434 Ga0496111_0033725
435 Ga0496114_0000206
436 Ga0496121_0000017
437 Ga0501047_0000742
438 Ga0500636_0027532
439 Ga0500611_002495
440 Ga0466962_0039016

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

64

402

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.7581 21 395
6g9x-assembly2.cif.gz_B crystal structure of a mfs transporter at 2.54 angstroem resolution 0.7514 19 397
8hpk-assembly1.cif.gz_A crystal structure of the bacterial oxalate transporter oxlt in an oxalate-bound occluded form 0.7495 21 389
6hcl-assembly2.cif.gz_B crystal structure of a mfs transporter with ligand at 2.69 angstroem resolution 0.7478 19 388
7l17-assembly1.cif.gz_A crystal structure of sugar-bound melibiose permease melb 0.7462 20 392
ID Description Score Start End Superfamily
af_P0AE16_11_205_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8196 20 194 1.20.1250.20
af_Q54W37_27_219_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.804 208 385 1.20.1250.20
af_K7ME40_19_224_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8026 19 184 1.20.1250.20
af_Q7K2N3_269_463_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8011 19 178 1.20.1250.20
af_P08194_18_226_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7991 20 187 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A1H4MH32-F1-model_v4 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG 0.9502 19 391 GO:0016020
AF-A0A102DEX1-F1-model_v4 MFS transporter 0.9394 24 388 GO:0016020
GO:0022857
AF-A0A2U1FYG6-F1-model_v4 deleted 0.9352 16 397
AF-A0A846MWP5-F1-model_v4 PAT family beta-lactamase induction signal transducer AmpG 0.9337 9 396 GO:0016020
GO:0022857
AF-A0A7D8BD48-F1-model_v4 MFS transporter 0.9241 10 391 GO:0016020

Map