F331282

General Info

Members Datasets Scaffolds Average Seq Length
219 146 219 335

Family's Representative Sequence

Representative Sequence 3300035089|Ga0373944_0050190|Ga0373944_0050190_26_1030
Length 327
Sequence MQARAPLGALLLSRSDVERLLTPEACIAAVEEAFLQHALGKLPAPGILGLHGPEGSFHVKAAFINADRPYFAAKLNANFPHNSERHGLPTIQGVVILCDAANGAPLAVMDSMAITALRTAAATAVAAKYLAPERCETALICGCGAQAVAQLRALLCTRRPARVYVYDQDREKARQFASSQEAELPIEVSAVPDLREAATCTTASRWFLARDMVRPGTFVAAVGADSEHKQEIDPQLMAQATVVTDLTVQACAIGDLHHAIDAGALSRADVHAELGEVVAGGKRGRSRDDEIIVFDSTGTGLQDVAAAAAVYRCALEQHTRIPFSFCD

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
104 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
105 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
109 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
110 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
111 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
112 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
113 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
114 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
115 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
116 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
117 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
118 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
119 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
120 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
121 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
122 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
127 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
128 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
137 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
138 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
145 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.65
Rhizosphere 95.89
Stem 0
Stem Tuber 0
Unclassified 0.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10151923 3300005289 Bacteria 1422
2 Ga0065712_10084021 3300005290 Bacteria 2795
3 Ga0070658_10217338 3300005327 Bacteria 1616
4 Ga0070676_10012949 3300005328 Bacteria 4569
5 Ga0070676_10065351 3300005328 Bacteria 2171
6 Ga0070676_10308270 3300005328 Bacteria 1075
7 Ga0070683_100007521 3300005329 Bacteria 9209
8 Ga0070670_100000513 3300005331 Bacteria 30984
9 Ga0070677_10004786 3300005333 Bacteria 4437
10 Ga0070677_10027761 3300005333 Bacteria 2133
11 Ga0068869_100271224 3300005334 Bacteria 1361
12 Ga0068868_100000181 3300005338 Bacteria 42028
13 Ga0070660_100179717 3300005339 Bacteria 1712
14 Ga0070661_100008571 3300005344 Bacteria 7070
15 Ga0070675_100000310 3300005354 Bacteria 32740
16 Ga0070671_100002758 3300005355 Bacteria 13637
17 Ga0070673_100001020 3300005364 Bacteria 15855
18 Ga0070673_100126641 3300005364 Unclassified 2138
19 Ga0070705_100008593 3300005440 Bacteria 5059
20 Ga0070705_100232919 3300005440 Bacteria 1282
21 Ga0070700_100085186 3300005441 Bacteria 2050
22 Ga0070694_100264612 3300005444 Bacteria 1305
23 Ga0070708_100045424 3300005445 Bacteria 3869
24 Ga0070678_100001292 3300005456 Bacteria 13276
25 Ga0070662_100110788 3300005457 Bacteria 2091
26 Ga0070681_10006560 3300005458 Bacteria 11330
27 Ga0068867_100005855 3300005459 Bacteria 8719
28 Ga0068867_100010188 3300005459 Bacteria 6631
29 Ga0070685_10114540 3300005466 Bacteria 1666
30 Ga0070706_100008170 3300005467 Bacteria 9766
31 Ga0070706_100018811 3300005467 Bacteria 6369
32 Ga0070706_100044788 3300005467 Bacteria 4086
33 Ga0070707_100020546 3300005468 Bacteria 6231
34 Ga0070707_100023977 3300005468 Bacteria 5773
35 Ga0070707_100024817 3300005468 Bacteria 5683
36 Ga0070707_100592306 3300005468 Bacteria 1071
37 Ga0070698_100001455 3300005471 Bacteria 26296
38 Ga0070698_100006078 3300005471 Bacteria 13151
39 Ga0070698_100211896 3300005471 Bacteria 1872
40 Ga0070699_100000967 3300005518 Bacteria 26762
41 Ga0070699_100050490 3300005518 Bacteria 3601
42 Ga0070699_100092045 3300005518 Bacteria 2652
43 Ga0070699_100243691 3300005518 Unclassified 1605
44 Ga0070679_100033884 3300005530 Bacteria 5058
45 Ga0070679_100126484 3300005530 Bacteria 2538
46 Ga0070684_100025816 3300005535 Bacteria 4942
47 Ga0070697_100003376 3300005536 Bacteria 12282
48 Ga0070697_100066437 3300005536 Unclassified 2949
49 Ga0070672_100003022 3300005543 Bacteria 10837
50 Ga0070686_100006990 3300005544 Bacteria 6290
51 Ga0070696_100030248 3300005546 Bacteria 3706
52 Ga0070696_100238189 3300005546 Bacteria 1371
53 Ga0070693_100178533 3300005547 Bacteria 1365
54 Ga0070665_100056277 3300005548 Bacteria 3944
55 Ga0070704_100021957 3300005549 Bacteria 4147
56 Ga0070664_100000484 3300005564 Bacteria 30129
57 Ga0068852_100001141 3300005616 Bacteria 17568
58 Ga0068866_10111987 3300005718 Bacteria 1524
59 Ga0068861_100431423 3300005719 Bacteria 1176
60 Ga0068863_100108323 3300005841 Bacteria 2644
61 Ga0068863_100149115 3300005841 Unclassified 2237
62 Ga0068862_100086929 3300005844 Bacteria 2719
63 Ga0068862_100266793 3300005844 Unclassified 1564
64 Ga0068862_100424321 3300005844 Bacteria 1249
65 Ga0081539_10016247 3300005985 Bacteria 5334
66 Ga0070715_10005657 3300006163 Bacteria 4188
67 Ga0097621_100000283 3300006237 Bacteria 34080
68 Ga0097621_100350108 3300006237 Bacteria 1313
69 Ga0068871_100002574 3300006358 Bacteria 12388
70 Ga0075428_100000602 3300006844 Bacteria 36732
71 Ga0075428_100001017 3300006844 Bacteria 29740
72 Ga0075428_100046545 3300006844 Bacteria 4765
73 Ga0075428_100088032 3300006844 Bacteria 3387
74 Ga0075428_100140347 3300006844 Bacteria 2627
75 Ga0075430_100349408 3300006846 Unclassified 1221
76 Ga0075434_100000407 3300006871 Bacteria 31711
77 Ga0075434_100226070 3300006871 Bacteria 1891
78 Ga0075434_100300015 3300006871 Bacteria 1627
79 Ga0075429_100003861 3300006880 Bacteria 12798
80 Ga0075429_100026481 3300006880 Bacteria 5036
81 Ga0075429_100171808 3300006880 Bacteria 1898
82 Ga0075436_100019967 3300006914 Bacteria 4597
83 Ga0075435_100000209 3300007076 Bacteria 35578
84 Ga0099794_10000103 3300007265 Bacteria 31330
85 Ga0099794_10016691 3300007265 Unclassified 3260
86 Ga0111539_10018353 3300009094 Bacteria 8666
87 Ga0111539_10046591 3300009094 Bacteria 5186
88 Ga0111539_10723918 3300009094 Unclassified 1158
89 Ga0114129_10014430 3300009147 Bacteria 11259
90 Ga0114129_10089149 3300009147 Bacteria 4276
91 Ga0114129_10174369 3300009147 Bacteria 2929
92 Ga0114129_10186451 3300009147 Bacteria 2819
93 Ga0114129_10194395 3300009147 Bacteria 2752
94 Ga0114129_10219527 3300009147 Unclassified 2565
95 Ga0114129_10578608 3300009147 Bacteria 1457
96 Ga0105243_10402997 3300009148 Bacteria 1271
97 Ga0105242_10023768 3300009176 Bacteria 4834
98 Ga0105248_10045813 3300009177 Bacteria 4903
99 Ga0105249_10538311 3300009553 Unclassified 1217
100 Ga0163162_10001123 3300013306 Bacteria 24905
101 Ga0163162_10384126 3300013306 Bacteria 1537
102 Ga0157375_10004003 3300013308 Bacteria 12784
103 Ga0157380_10106132 3300014326 Bacteria 2350
104 Ga0157377_10018758 3300014745 Bacteria 3602
105 Ga0157377_10171694 3300014745 Unclassified 1357
106 Ga0157376_10004163 3300014969 Bacteria 10027
107 Ga0207697_10005080 3300025315 Bacteria 6163
108 Ga0207656_10005659 3300025321 Bacteria 4436
109 Ga0207682_10000987 3300025893 Bacteria 13141
110 Ga0207680_10035204 3300025903 Bacteria 2872
111 Ga0207645_10014750 3300025907 Bacteria 5218
112 Ga0207645_10017006 3300025907 Bacteria 4805
113 Ga0207645_10148188 3300025907 Bacteria 1531
114 Ga0207643_10013336 3300025908 Bacteria 4448
115 Ga0207705_10018143 3300025909 Bacteria 5030
116 Ga0207684_10006792 3300025910 Bacteria 10376
117 Ga0207707_10254427 3300025912 Unclassified 1525
118 Ga0207662_10007890 3300025918 Bacteria 5798
119 Ga0207649_10003136 3300025920 Bacteria 9065
120 Ga0207646_10013272 3300025922 Bacteria 7881
121 Ga0207646_10530903 3300025922 Bacteria 1059
122 Ga0207681_10231773 3300025923 Bacteria 1433
123 Ga0207650_10002056 3300025925 Bacteria 14069
124 Ga0207659_10001113 3300025926 Bacteria 15935
125 Ga0207644_10021772 3300025931 Bacteria 4371
126 Ga0207706_10027581 3300025933 Bacteria 5077
127 Ga0207706_10121881 3300025933 Bacteria 2293
128 Ga0207686_10003651 3300025934 Bacteria 8248
129 Ga0207670_10039460 3300025936 Bacteria 3092
130 Ga0207669_10003838 3300025937 Bacteria 6549
131 Ga0207665_10012847 3300025939 Bacteria 5507
132 Ga0207665_10196379 3300025939 Bacteria 1468
133 Ga0207691_10005603 3300025940 Bacteria 12138
134 Ga0207689_10033346 3300025942 Bacteria 4279
135 Ga0207689_10296233 3300025942 Bacteria 1340
136 Ga0207661_10004216 3300025944 Bacteria 10059
137 Ga0207679_10347176 3300025945 Bacteria 1292
138 Ga0207651_10001221 3300025960 Bacteria 11536
139 Ga0207651_10097633 3300025960 Unclassified 2170
140 Ga0207651_10131392 3300025960 Unclassified 1917
141 Ga0207712_10113169 3300025961 Bacteria 2039
142 Ga0207668_10036748 3300025972 Bacteria 3272
143 Ga0207677_10003425 3300026023 Bacteria 8408
144 Ga0207708_10015462 3300026075 Bacteria 5724
145 Ga0207648_10007857 3300026089 Bacteria 10409
146 Ga0207648_10055723 3300026089 Bacteria 3451
147 Ga0207676_10048777 3300026095 Bacteria 3289
148 Ga0207675_100023974 3300026118 Bacteria 5672
149 Ga0207675_100535404 3300026118 Bacteria 1169
150 Ga0207683_10000444 3300026121 Bacteria 38287
151 Ga0207683_10133368 3300026121 Bacteria 2235
152 Ga0209588_1000014 3300027671 Bacteria 133062
153 Ga0207428_10004784 3300027907 Bacteria 12791
154 Ga0207428_10041215 3300027907 Bacteria 3740
155 Ga0268266_10287963 3300028379 Bacteria 1529
156 Ga0268266_10482444 3300028379 Bacteria 1182
157 Ga0268265_10358888 3300028380 Bacteria 1333
158 Ga0307513_10047510 3300031456 Bacteria 4669
159 Ga0307410_10256805 3300031852 Unclassified 1361
160 Ga0307407_10070264 3300031903 Unclassified 2081
161 Ga0307409_100567839 3300031995 Bacteria 1116
162 Ga0307416_100011275 3300032002 Bacteria 5947
163 Ga0307411_10032123 3300032005 Unclassified 3240
164 Ga0307411_10077459 3300032005 Bacteria 2276
165 Ga0373928_0004698 3300035084 Bacteria 2602
166 Ga0373940_0004809 3300035088 Bacteria 2881
167 Ga0373944_0050190 3300035089 Bacteria 1313
168 Ga0373949_0003349 3300035090 Bacteria 3845
169 Ga0373936_0010624 3300035113 Bacteria 3476
170 Ga0373941_0004600 3300035115 Bacteria 3199
171 Ga0373943_0001285 3300035170 Bacteria 11246
172 Ga0373946_0003710 3300035171 Bacteria 5412
173 Ga0373942_0022089 3300035207 Bacteria 1611
174 Ga0373931_0001475 3300035691 Bacteria 10129
175 Ga0373935_0034270 3300035692 Bacteria 3164
176 Ga0373927_0193093 3300035695 Unclassified 1336
177 Ga0373933_0011042 3300035724 Bacteria 4963
178 Ga0373947_0009588 3300035725 Bacteria 5556
179 Ga0373937_0001639 3300036401 Bacteria 18809
180 Ga0373925_0006447 3300037068 Bacteria 8636
181 Ga0451576_0001999 3300045051 Bacteria 32284
182 Ga0451576_0110797 3300045051 Bacteria 2856
183 Ga0451576_0475635 3300045051 Bacteria 1312
184 Ga0495638_0000026 3300046460 Bacteria 347061
185 Ga0495580_0122353 3300046472 Bacteria 1806
186 Ga0496100_0205334 3300048903 Bacteria 1438
187 Ga0496108_0074177 3300048911 Bacteria 2872
188 Ga0496109_0276800 3300048912 Bacteria 1581
189 Ga0496110_0215571 3300048913 Bacteria 1745
190 Ga0496111_0106741 3300048914 Bacteria 2061
191 Ga0496114_0025126 3300048917 Bacteria 4867
192 Ga0496114_0028622 3300048917 Bacteria 4574
193 Ga0496115_0004208 3300048918 Bacteria 10406
194 Ga0501036_0168151 3300049572 Bacteria 1848
195 Ga0501202_006110 3300049652 Bacteria 2147
196 Ga0501259_009643 3300049688 Bacteria 1569
197 Ga0501212_000361 3300049851 Unclassified 4269
198 nmdc:mga05p37_11171_c1 3300050507 Bacteria 10673
199 nmdc:mga05p37_198340_c1 3300050507 Bacteria 2433
200 nmdc:mga05p37_344243_c1 3300050507 Bacteria 1757
201 nmdc:mga05p37_37811_c1 3300050507 Bacteria 5920
202 nmdc:mga05p37_389386_c1 3300050507 Unclassified 1630
203 nmdc:mga09592_21673_c1 3300050508 Bacteria 5297
204 nmdc:mga09592_32284_c1 3300050508 Bacteria 4365
205 nmdc:mga09592_342883_c1 3300050508 Bacteria 1293
206 nmdc:mga09592_38544_c1 3300050508 Bacteria 4012
207 nmdc:mga09592_6702_c1 3300050508 Bacteria 7799
208 nmdc:mga0qj67_128078_c1 3300050509 Bacteria 2054
209 nmdc:mga08y16_105869_c1 3300050511 Bacteria 2928
210 nmdc:mga08y16_262_c1 3300050511 Bacteria 47546
211 nmdc:mga08y16_33481_c1 3300050511 Bacteria 5396
212 nmdc:mga08y16_663_c1 3300050511 Bacteria 32446
213 nmdc:mga0n895_253892_c1 3300050512 Bacteria 1784
214 nmdc:mga0n895_36491_c1 3300050512 Bacteria 4747
215 nmdc:mga0n895_374024_c1 3300050512 Bacteria 1442
216 nmdc:mga0rr50_22246_c1 3300050513 Bacteria 4348
217 nmdc:mga08x19_66000_c1 3300050514 Unclassified 2351
218 nmdc:mga0a205_161339_c1 3300050515 Bacteria 2138
219 nmdc:mga0a205_78886_c1 3300050515 Bacteria 3181

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300006844 Ga0075428_100000602 Ga0075428_10000060235 307
2 3300006880 Ga0075429_100003861 Ga0075429_1000038618 307
3 3300009094 Ga0111539_10046591 Ga0111539_100465913 307
4 3300027907 Ga0207428_10004784 Ga0207428_1000478410 307
5 3300050507 nmdc:mga05p37_11171_c1 nmdc:mga05p37_11171_c1_640_1644 307
6 3300050508 nmdc:mga09592_6702_c1 nmdc:mga09592_6702_c1_591_1595 307
7 3300050511 nmdc:mga08y16_262_c1 nmdc:mga08y16_262_c1_4174_5178 307
8 3300006880 Ga0075429_100171808 Ga0075429_1001718081 319
9 3300005468 Ga0070707_100592306 Ga0070707_1005923061 322
10 3300005471 Ga0070698_100211896 Ga0070698_1002118962 322
11 3300025922 Ga0207646_10530903 Ga0207646_105309031 322
12 3300035089 Ga0373944_0050190 Ga0373944_0050190_26_1030 324
13 3300035113 Ga0373936_0010624 Ga0373936_0010624_758_1762 324
14 3300035170 Ga0373943_0001285 Ga0373943_0001285_1890_2894 324
15 3300035171 Ga0373946_0003710 Ga0373946_0003710_3497_4501 324
16 3300035692 Ga0373935_0034270 Ga0373935_0034270_1649_2653 324
17 3300035725 Ga0373947_0009588 Ga0373947_0009588_1042_2046 324
18 3300037068 Ga0373925_0006447 Ga0373925_0006447_3171_4175 324
19 3300048903 Ga0496100_0205334 Ga0496100_0205334_63_1037 324
20 3300005530 Ga0070679_100033884 Ga0070679_1000338841 326
21 3300006844 Ga0075428_100046545 Ga0075428_1000465452 326
22 3300006871 Ga0075434_100300015 Ga0075434_1003000152 326
23 3300006880 Ga0075429_100026481 Ga0075429_1000264814 326
24 3300009147 Ga0114129_10014430 Ga0114129_100144307 326
25 3300025912 Ga0207707_10254427 Ga0207707_102544272 326
26 3300031456 Ga0307513_10047510 Ga0307513_100475105 326
27 3300050507 nmdc:mga05p37_198340_c1 nmdc:mga05p37_198340_c1_1318_2298 326
28 3300050508 nmdc:mga09592_21673_c1 nmdc:mga09592_21673_c1_2117_3097 326
29 3300050509 nmdc:mga0qj67_128078_c1 nmdc:mga0qj67_128078_c1_103_1083 326
30 3300050512 nmdc:mga0n895_253892_c1 nmdc:mga0n895_253892_c1_541_1521 326
31 3300005334 Ga0068869_100271224 Ga0068869_1002712242 327
32 3300005364 Ga0070673_100126641 Ga0070673_1001266413 327
33 3300005440 Ga0070705_100008593 Ga0070705_1000085931 327
34 3300005444 Ga0070694_100264612 Ga0070694_1002646121 327
35 3300005459 Ga0068867_100005855 Ga0068867_10000585510 327
36 3300005544 Ga0070686_100006990 Ga0070686_1000069901 327
37 3300005546 Ga0070696_100238189 Ga0070696_1002381892 327
38 3300005547 Ga0070693_100178533 Ga0070693_1001785332 327
39 3300005719 Ga0068861_100431423 Ga0068861_1004314232 327
40 3300005844 Ga0068862_100424321 Ga0068862_1004243212 327
41 3300006163 Ga0070715_10005657 Ga0070715_100056574 327
42 3300006237 Ga0097621_100350108 Ga0097621_1003501082 327
43 3300006871 Ga0075434_100000407 Ga0075434_10000040736 327
44 3300007076 Ga0075435_100000209 Ga0075435_10000020941 327
45 3300009176 Ga0105242_10023768 Ga0105242_100237685 327
46 3300025934 Ga0207686_10003651 Ga0207686_100036512 327
47 3300025939 Ga0207665_10196379 Ga0207665_101963791 327
48 3300025942 Ga0207689_10296233 Ga0207689_102962332 327
49 3300025960 Ga0207651_10097633 Ga0207651_100976333 327
50 3300026089 Ga0207648_10007857 Ga0207648_1000785712 327
51 3300026118 Ga0207675_100535404 Ga0207675_1005354042 327
52 3300031903 Ga0307407_10070264 Ga0307407_100702643 327
53 3300031995 Ga0307409_100567839 Ga0307409_1005678391 327
54 3300049572 Ga0501036_0168151 Ga0501036_0168151_817_1806 327
55 3300049652 Ga0501202_006110 Ga0501202_006110_679_1662 327
56 3300049688 Ga0501259_009643 Ga0501259_009643_424_1407 327
57 3300049851 Ga0501212_000361 Ga0501212_000361_361_1344 327
58 3300050512 nmdc:mga0n895_36491_c1 nmdc:mga0n895_36491_c1_1404_2438 327
59 3300050513 nmdc:mga0rr50_22246_c1 nmdc:mga0rr50_22246_c1_1063_2097 327
60 3300035724 Ga0373933_0011042 Ga0373933_0011042_3192_4205 328
61 3300036401 Ga0373937_0001639 Ga0373937_0001639_12874_13887 328
62 3300045051 Ga0451576_0001999 Ga0451576_0001999_10153_11187 328
63 3300005440 Ga0070705_100232919 Ga0070705_1002329191 329
64 3300005467 Ga0070706_100018811 Ga0070706_1000188117 329
65 3300005518 Ga0070699_100243691 Ga0070699_1002436912 329
66 3300005549 Ga0070704_100021957 Ga0070704_1000219572 329
67 3300005844 Ga0068862_100086929 Ga0068862_1000869293 329
68 3300006844 Ga0075428_100088032 Ga0075428_1000880323 329
69 3300006844 Ga0075428_100140347 Ga0075428_1001403472 329
70 3300009094 Ga0111539_10018353 Ga0111539_100183534 329
71 3300009147 Ga0114129_10186451 Ga0114129_101864513 329
72 3300009147 Ga0114129_10194395 Ga0114129_101943952 329
73 3300009147 Ga0114129_10578608 Ga0114129_105786082 329
74 3300025942 Ga0207689_10033346 Ga0207689_100333464 329
75 3300035088 Ga0373940_0004809 Ga0373940_0004809_1543_2541 329
76 3300050507 nmdc:mga05p37_344243_c1 nmdc:mga05p37_344243_c1_695_1684 329
77 3300050508 nmdc:mga09592_38544_c1 nmdc:mga09592_38544_c1_2588_3577 329
78 3300050511 nmdc:mga08y16_33481_c1 nmdc:mga08y16_33481_c1_3541_4530 329
79 3300050515 nmdc:mga0a205_78886_c1 nmdc:mga0a205_78886_c1_112_1113 329
80 3300005328 Ga0070676_10012949 Ga0070676_100129494 330
81 3300005467 Ga0070706_100008170 Ga0070706_1000081709 330
82 3300005468 Ga0070707_100020546 Ga0070707_1000205467 330
83 3300005518 Ga0070699_100092045 Ga0070699_1000920453 330
84 3300005536 Ga0070697_100003376 Ga0070697_1000033769 330
85 3300006914 Ga0075436_100019967 Ga0075436_1000199675 330
86 3300025907 Ga0207645_10014750 Ga0207645_100147504 330
87 3300025910 Ga0207684_10006792 Ga0207684_100067922 330
88 3300025922 Ga0207646_10013272 Ga0207646_100132723 330
89 3300025945 Ga0207679_10347176 Ga0207679_103471761 330
90 3300050511 nmdc:mga08y16_105869_c1 nmdc:mga08y16_105869_c1_1606_2598 330
91 3300050514 nmdc:mga08x19_66000_c1 nmdc:mga08x19_66000_c1_545_1540 330
92 3300005290 Ga0065712_10084021 Ga0065712_100840212 331
93 3300005327 Ga0070658_10217338 Ga0070658_102173381 331
94 3300005328 Ga0070676_10065351 Ga0070676_100653513 331
95 3300005328 Ga0070676_10308270 Ga0070676_103082701 331
96 3300005329 Ga0070683_100007521 Ga0070683_10000752112 331
97 3300005331 Ga0070670_100000513 Ga0070670_10000051316 331
98 3300005333 Ga0070677_10004786 Ga0070677_100047861 331
99 3300005333 Ga0070677_10027761 Ga0070677_100277611 331
100 3300005338 Ga0068868_100000181 Ga0068868_10000018117 331
101 3300005339 Ga0070660_100179717 Ga0070660_1001797171 331
102 3300005344 Ga0070661_100008571 Ga0070661_1000085712 331
103 3300005354 Ga0070675_100000310 Ga0070675_10000031015 331
104 3300005355 Ga0070671_100002758 Ga0070671_1000027582 331
105 3300005364 Ga0070673_100001020 Ga0070673_10000102011 331
106 3300005441 Ga0070700_100085186 Ga0070700_1000851862 331
107 3300005445 Ga0070708_100045424 Ga0070708_1000454243 331
108 3300005456 Ga0070678_100001292 Ga0070678_1000012922 331
109 3300005457 Ga0070662_100110788 Ga0070662_1001107881 331
110 3300005458 Ga0070681_10006560 Ga0070681_100065608 331
111 3300005459 Ga0068867_100010188 Ga0068867_1000101882 331
112 3300005466 Ga0070685_10114540 Ga0070685_101145402 331
113 3300005467 Ga0070706_100044788 Ga0070706_1000447882 331
114 3300005468 Ga0070707_100023977 Ga0070707_1000239774 331
115 3300005468 Ga0070707_100024817 Ga0070707_1000248173 331
116 3300005471 Ga0070698_100001455 Ga0070698_10000145529 331
117 3300005471 Ga0070698_100006078 Ga0070698_1000060784 331
118 3300005518 Ga0070699_100000967 Ga0070699_1000009675 331
119 3300005518 Ga0070699_100050490 Ga0070699_1000504902 331
120 3300005530 Ga0070679_100126484 Ga0070679_1001264842 331
121 3300005535 Ga0070684_100025816 Ga0070684_1000258164 331
122 3300005536 Ga0070697_100066437 Ga0070697_1000664371 331
123 3300005543 Ga0070672_100003022 Ga0070672_1000030224 331
124 3300005546 Ga0070696_100030248 Ga0070696_1000302484 331
125 3300005548 Ga0070665_100056277 Ga0070665_1000562774 331
126 3300005564 Ga0070664_100000484 Ga0070664_10000048417 331
127 3300005616 Ga0068852_100001141 Ga0068852_10000114115 331
128 3300005718 Ga0068866_10111987 Ga0068866_101119872 331
129 3300005841 Ga0068863_100108323 Ga0068863_1001083233 331
130 3300005841 Ga0068863_100149115 Ga0068863_1001491151 331
131 3300005844 Ga0068862_100266793 Ga0068862_1002667932 331
132 3300005985 Ga0081539_10016247 Ga0081539_100162473 331
133 3300006237 Ga0097621_100000283 Ga0097621_1000002835 331
134 3300006358 Ga0068871_100002574 Ga0068871_10000257414 331
135 3300006844 Ga0075428_100001017 Ga0075428_10000101712 331
136 3300006846 Ga0075430_100349408 Ga0075430_1003494081 331
137 3300006871 Ga0075434_100226070 Ga0075434_1002260702 331
138 3300007265 Ga0099794_10000103 Ga0099794_1000010326 331
139 3300007265 Ga0099794_10016691 Ga0099794_100166912 331
140 3300009094 Ga0111539_10723918 Ga0111539_107239181 331
141 3300009147 Ga0114129_10089149 Ga0114129_100891492 331
142 3300009147 Ga0114129_10174369 Ga0114129_101743692 331
143 3300009147 Ga0114129_10219527 Ga0114129_102195273 331
144 3300009177 Ga0105248_10045813 Ga0105248_100458132 331
145 3300009553 Ga0105249_10538311 Ga0105249_105383112 331
146 3300013306 Ga0163162_10001123 Ga0163162_1000112314 331
147 3300013308 Ga0157375_10004003 Ga0157375_1000400310 331
148 3300014326 Ga0157380_10106132 Ga0157380_101061321 331
149 3300014745 Ga0157377_10018758 Ga0157377_100187584 331
150 3300014745 Ga0157377_10171694 Ga0157377_101716942 331
151 3300014969 Ga0157376_10004163 Ga0157376_100041633 331
152 3300025315 Ga0207697_10005080 Ga0207697_100050803 331
153 3300025321 Ga0207656_10005659 Ga0207656_100056594 331
154 3300025893 Ga0207682_10000987 Ga0207682_100009873 331
155 3300025903 Ga0207680_10035204 Ga0207680_100352043 331
156 3300025907 Ga0207645_10017006 Ga0207645_100170064 331
157 3300025907 Ga0207645_10148188 Ga0207645_101481882 331
158 3300025908 Ga0207643_10013336 Ga0207643_100133362 331
159 3300025909 Ga0207705_10018143 Ga0207705_100181433 331
160 3300025918 Ga0207662_10007890 Ga0207662_100078904 331
161 3300025920 Ga0207649_10003136 Ga0207649_1000313612 331
162 3300025923 Ga0207681_10231773 Ga0207681_102317732 331
163 3300025925 Ga0207650_10002056 Ga0207650_100020567 331
164 3300025926 Ga0207659_10001113 Ga0207659_1000111314 331
165 3300025931 Ga0207644_10021772 Ga0207644_100217726 331
166 3300025933 Ga0207706_10027581 Ga0207706_100275814 331
167 3300025933 Ga0207706_10121881 Ga0207706_101218812 331
168 3300025936 Ga0207670_10039460 Ga0207670_100394603 331
169 3300025937 Ga0207669_10003838 Ga0207669_100038385 331
170 3300025939 Ga0207665_10012847 Ga0207665_100128474 331
171 3300025940 Ga0207691_10005603 Ga0207691_1000560310 331
172 3300025944 Ga0207661_10004216 Ga0207661_100042166 331
173 3300025960 Ga0207651_10001221 Ga0207651_100012215 331
174 3300025960 Ga0207651_10131392 Ga0207651_101313922 331
175 3300025961 Ga0207712_10113169 Ga0207712_101131691 331
176 3300025972 Ga0207668_10036748 Ga0207668_100367482 331
177 3300026023 Ga0207677_10003425 Ga0207677_100034256 331
178 3300026075 Ga0207708_10015462 Ga0207708_100154623 331
179 3300026089 Ga0207648_10055723 Ga0207648_100557233 331
180 3300026095 Ga0207676_10048777 Ga0207676_100487773 331
181 3300026118 Ga0207675_100023974 Ga0207675_1000239742 331
182 3300026121 Ga0207683_10000444 Ga0207683_1000044419 331
183 3300026121 Ga0207683_10133368 Ga0207683_101333682 331
184 3300027671 Ga0209588_1000014 Ga0209588_100001433 331
185 3300027907 Ga0207428_10041215 Ga0207428_100412152 331
186 3300028379 Ga0268266_10287963 Ga0268266_102879631 331
187 3300028379 Ga0268266_10482444 Ga0268266_104824442 331
188 3300028380 Ga0268265_10358888 Ga0268265_103588881 331
189 3300031852 Ga0307410_10256805 Ga0307410_102568052 331
190 3300032002 Ga0307416_100011275 Ga0307416_1000112755 331
191 3300032005 Ga0307411_10032123 Ga0307411_100321234 331
192 3300032005 Ga0307411_10077459 Ga0307411_100774592 331
193 3300035084 Ga0373928_0004698 Ga0373928_0004698_677_1681 331
194 3300035090 Ga0373949_0003349 Ga0373949_0003349_890_1894 331
195 3300035115 Ga0373941_0004600 Ga0373941_0004600_1786_2790 331
196 3300035207 Ga0373942_0022089 Ga0373942_0022089_10_1014 331
197 3300035691 Ga0373931_0001475 Ga0373931_0001475_2786_3790 331
198 3300035695 Ga0373927_0193093 Ga0373927_0193093_56_1060 331
199 3300045051 Ga0451576_0110797 Ga0451576_0110797_1603_2607 331
200 3300045051 Ga0451576_0475635 Ga0451576_0475635_34_1101 331
201 3300046460 Ga0495638_0000026 Ga0495638_0000026_109044_110039 331
202 3300046472 Ga0495580_0122353 Ga0495580_0122353_710_1705 331
203 3300048911 Ga0496108_0074177 Ga0496108_0074177_228_1277 331
204 3300048912 Ga0496109_0276800 Ga0496109_0276800_247_1296 331
205 3300048913 Ga0496110_0215571 Ga0496110_0215571_283_1332 331
206 3300048914 Ga0496111_0106741 Ga0496111_0106741_964_2013 331
207 3300048917 Ga0496114_0025126 Ga0496114_0025126_1402_2442 331
208 3300048917 Ga0496114_0028622 Ga0496114_0028622_1638_2687 331
209 3300048918 Ga0496115_0004208 Ga0496115_0004208_306_1346 331
210 3300050507 nmdc:mga05p37_37811_c1 nmdc:mga05p37_37811_c1_2617_3612 331
211 3300050507 nmdc:mga05p37_389386_c1 nmdc:mga05p37_389386_c1_56_1051 331
212 3300050508 nmdc:mga09592_32284_c1 nmdc:mga09592_32284_c1_3190_4185 331
213 3300050508 nmdc:mga09592_342883_c1 nmdc:mga09592_342883_c1_177_1172 331
214 3300050511 nmdc:mga08y16_663_c1 nmdc:mga08y16_663_c1_1419_2471 331
215 3300050512 nmdc:mga0n895_374024_c1 nmdc:mga0n895_374024_c1_257_1294 331
216 3300050515 nmdc:mga0a205_161339_c1 nmdc:mga0a205_161339_c1_875_1930 331
217 3300009148 Ga0105243_10402997 Ga0105243_104029972 332
218 3300005289 Ga0065704_10151923 Ga0065704_101519231 333
219 3300013306 Ga0163162_10384126 Ga0163162_103841262 333

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02423

OCD_Mu_crystall

Ornithine cyclodeaminase/mu-crystallin family

8

318

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1omo-assembly1.cif.gz_B alanine dehydrogenase dimer w/bound nad (archaeal) 0.9626 5 329
1omo-assembly1.cif.gz_B alanine dehydrogenase dimer w/bound nad (archaeal) 0.9538 5 329
6t3e-assembly1.cif.gz_A structure of thermococcus litoralis delta(1)-pyrroline-2-carboxylate reductase in complex with nadh and l-proline 0.9421 6 327
6t3e-assembly1.cif.gz_A structure of thermococcus litoralis delta(1)-pyrroline-2-carboxylate reductase in complex with nadh and l-proline 0.9365 6 327
3hdj-assembly1.cif.gz_B the crystal structure of probable ornithine cyclodeaminase from bordetella pertussis tohama i 0.924 6 322
ID Description Score Start End Superfamily
1vllA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9661 129 302 3.40.50.720
af_Q9HDZ0_133_310_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9635 133 302 3.40.50.720
1vllA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9606 129 302 3.40.50.720
af_Q9FLY0_138_305_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9483 139 302 3.40.50.720
af_Q9FLY0_138_305_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9212 139 302 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1Q7HCG6-F1-model_v4 Ornithine cyclodeaminase family protein 0.9868 6 328 GO:0005737
AF-A0A1M5VP40-F1-model_v4 Ornithine cyclodeaminase 0.9865 1 331 GO:0005737
AF-A0A1M5VP40-F1-model_v4 Ornithine cyclodeaminase 0.9836 1 331 GO:0005737
AF-A0A1Q7HCG6-F1-model_v4 Ornithine cyclodeaminase family protein 0.9808 6 328 GO:0005737
AF-A0A2V7Z9N5-F1-model_v4 Ornithine cyclodeaminase family protein 0.9783 159 329 GO:0005737

Feature Viewer

pLDDT pTM Quality
94.74 0.92 High
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Predicted Structure (AlphaFold2)

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