F331139

General Info

Members Datasets Scaffolds Average Seq Length
219 124 438 286

Family's Representative Sequence

Representative Sequence 3300021384|Ga0213876_10023237|Ga0213876_100232373
Length 316
Sequence LGAELPGVAEFLLNKKEYTVSVARVAGPASKNQVKDYLELTKPRITWLIVMSTAVGYYFGHGGAWSAWAVLHALMGTALIASGTAALNQWYERDADREMRRTQQRPLPSGRMNAKNALLFGIGLAVAGGLEMGFGVNWLCSALGIATLMMYLFLYTPLKQKTWWSTTVGAFPGAMPPLIGYAAGANKLTPEALVLGAILFLWQFPHFYAIAWMYREDYSRAGIRMLPVVEPDGESTARQILLFSCLLIPISLLPKWMGMTGTIYMVGAILLGLLFLYAGIRVSLDRTKLRARKVLLASVVYLPVLYALMVLDPARS

Samples

Sample ID Description Type Environment
1 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
52 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
76 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
77 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
78 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
82 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
83 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
84 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
85 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
86 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
87 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
88 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
97 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
98 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
102 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
103 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
104 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
105 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
106 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
107 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
108 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
111 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.46
Rhizosphere 86.76
Stem 0
Stem Tuber 0
Unclassified 13.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213876_10023237 3300021384 Bacteria 3275
2 Ga0070683_100000430 3300005329 Bacteria 29132
3 Ga0070683_100336931 3300005329 Bacteria 1436
4 Ga0070683_100696520 3300005329 Bacteria 973
5 Ga0070666_10229358 3300005335 Bacteria 1311
6 Ga0070680_100124666 3300005336 Unclassified 2152
7 Ga0068868_100288759 3300005338 Bacteria 1390
8 Ga0070689_100033129 3300005340 Bacteria 3934
9 Ga0070689_100097964 3300005340 Unclassified 2319
10 Ga0070661_100098023 3300005344 Bacteria 2177
11 Ga0070673_100071767 3300005364 Bacteria 2783
12 Ga0070659_100036324 3300005366 Bacteria 3841
13 Ga0070714_100002284 3300005435 Bacteria 14091
14 Ga0070714_100112461 3300005435 Bacteria 2413
15 Ga0070714_100172401 3300005435 Bacteria 1964
16 Ga0070713_100015068 3300005436 Bacteria 5761
17 Ga0070711_100056470 3300005439 Bacteria 2715
18 Ga0070711_100174075 3300005439 Bacteria 1643
19 Ga0070663_100217021 3300005455 Unclassified 1500
20 Ga0070678_100284662 3300005456 Bacteria 1399
21 Ga0070681_10002496 3300005458 Bacteria 16846
22 Ga0070681_10120252 3300005458 Unclassified 2562
23 Ga0070685_10091199 3300005466 Bacteria 1844
24 Ga0070679_100181129 3300005530 Unclassified 2079
25 Ga0070684_100000418 3300005535 Bacteria 29139
26 Ga0068853_100057927 3300005539 Bacteria 3344
27 Ga0068853_100354128 3300005539 Unclassified 1366
28 Ga0070695_100324996 3300005545 Unclassified 1145
29 Ga0070665_100257260 3300005548 Bacteria 1747
30 Ga0068855_100158035 3300005563 Bacteria 2575
31 Ga0068855_100215725 3300005563 Bacteria 2154
32 Ga0068855_100389034 3300005563 Bacteria 1530
33 Ga0068856_100036464 3300005614 Unclassified 4821
34 Ga0068856_100041405 3300005614 Bacteria 4527
35 Ga0068856_100313911 3300005614 Bacteria 1585
36 Ga0068852_100106760 3300005616 Bacteria 2539
37 Ga0068864_100170370 3300005618 Bacteria 1985
38 Ga0068870_10224722 3300005840 Bacteria 1151
39 Ga0068863_100050430 3300005841 Bacteria 3945
40 Ga0068858_100515640 3300005842 Bacteria 1156
41 Ga0081455_10028768 3300005937 Bacteria 5073
42 Ga0070717_10007063 3300006028 Bacteria 8317
43 Ga0070717_10010184 3300006028 Bacteria 7080
44 Ga0070717_10023133 3300006028 Unclassified 4919
45 Ga0070717_10039977 3300006028 Bacteria 3818
46 Ga0097621_100536978 3300006237 Bacteria 1063
47 Ga0068871_100188356 3300006358 Bacteria 1776
48 Ga0075430_100055885 3300006846 Bacteria 3319
49 Ga0075430_100229586 3300006846 Bacteria 1539
50 Ga0075436_100006868 3300006914 Bacteria 7784
51 Ga0105240_10001227 3300009093 Bacteria 44588
52 Ga0105240_10033016 3300009093 Bacteria 6691
53 Ga0105240_10048842 3300009093 Bacteria 5346
54 Ga0105240_10141101 3300009093 Bacteria 2881
55 Ga0105240_10290913 3300009093 Bacteria 1873
56 Ga0111539_10723325 3300009094 Bacteria 1159
57 Ga0105245_10343649 3300009098 Bacteria 1476
58 Ga0114129_11223560 3300009147 Bacteria 934
59 Ga0105248_10044944 3300009177 Bacteria 4953
60 Ga0105248_10088823 3300009177 Bacteria 3479
61 Ga0105248_10196337 3300009177 Unclassified 2274
62 Ga0105248_10245773 3300009177 Bacteria 2014
63 Ga0105237_10005387 3300009545 Bacteria 14457
64 Ga0105237_10097425 3300009545 Bacteria 2931
65 Ga0105237_10157946 3300009545 Bacteria 2265
66 Ga0105249_10731281 3300009553 Bacteria 1051
67 Ga0105239_10060555 3300010375 Bacteria 4155
68 Ga0105239_10693047 3300010375 Bacteria 1164
69 Ga0105246_10066892 3300011119 Bacteria 2517
70 Ga0157373_10375841 3300013100 Bacteria 1016
71 Ga0157370_10063766 3300013104 Bacteria 3490
72 Ga0157370_10329383 3300013104 Bacteria 1408
73 Ga0157370_10408929 3300013104 Bacteria 1249
74 Ga0157370_10580793 3300013104 Bacteria 1027
75 Ga0157369_10021371 3300013105 Bacteria 7239
76 Ga0157369_10125784 3300013105 Bacteria 2718
77 Ga0157369_10142608 3300013105 Bacteria 2534
78 Ga0157369_10330319 3300013105 Unclassified 1584
79 Ga0157374_10008875 3300013296 Bacteria 8610
80 Ga0157374_10168545 3300013296 Bacteria 2135
81 Ga0163162_10281676 3300013306 Bacteria 1794
82 Ga0157375_10876312 3300013308 Bacteria 1043
83 Ga0163163_10108379 3300014325 Unclassified 2805
84 Ga0213876_10051556 3300021384 Bacteria 2175
85 Ga0213875_10006350 3300021388 Bacteria 6221
86 Ga0213875_10012197 3300021388 Bacteria 4250
87 Ga0213875_10014941 3300021388 Bacteria 3781
88 Ga0213875_10033045 3300021388 Bacteria 2443
89 Ga0213875_10045800 3300021388 Bacteria 2053
90 Ga0207680_10194751 3300025903 Bacteria 1378
91 Ga0207707_10042072 3300025912 Bacteria 3989
92 Ga0207707_10191622 3300025912 Unclassified 1783
93 Ga0207695_10018683 3300025913 Bacteria 8006
94 Ga0207695_10048406 3300025913 Bacteria 4489
95 Ga0207660_10087848 3300025917 Unclassified 2298
96 Ga0207649_10127159 3300025920 Bacteria 1726
97 Ga0207652_10224285 3300025921 Bacteria 1693
98 Ga0207700_10015381 3300025928 Bacteria 5046
99 Ga0207664_10033446 3300025929 Bacteria 3950
100 Ga0207664_10247031 3300025929 Bacteria 1556
101 Ga0207664_10406759 3300025929 Unclassified 1211
102 Ga0207644_10324613 3300025931 Bacteria 1245
103 Ga0207690_10122241 3300025932 Bacteria 1893
104 Ga0207670_10024003 3300025936 Bacteria 3805
105 Ga0207670_10051150 3300025936 Bacteria 2773
106 Ga0207711_10037118 3300025941 Bacteria 4137
107 Ga0207711_10084389 3300025941 Bacteria 2780
108 Ga0207661_10001744 3300025944 Bacteria 14885
109 Ga0207679_10052467 3300025945 Bacteria 2991
110 Ga0207667_10355296 3300025949 Bacteria 1494
111 Ga0207651_10053904 3300025960 Bacteria 2752
112 Ga0207677_10259036 3300026023 Bacteria 1417
113 Ga0207703_10032017 3300026035 Bacteria 4160
114 Ga0207639_10095968 3300026041 Bacteria 2384
115 Ga0207702_10013284 3300026078 Bacteria 6848
116 Ga0207702_10089650 3300026078 Bacteria 2689
117 Ga0207641_10111396 3300026088 Bacteria 2427
118 Ga0207676_10160584 3300026095 Bacteria 1947
119 Ga0207698_10126658 3300026142 Bacteria 2173
120 Ga0265323_10000393 3300028653 Bacteria 25179
121 Ga0265338_10133576 3300028800 Bacteria 1955
122 Ga0265330_10078757 3300031235 Bacteria 1421
123 Ga0265331_10027226 3300031250 Bacteria 2868
124 Ga0265316_10008020 3300031344 Bacteria 9857
125 Ga0265316_10034336 3300031344 Bacteria 4120
126 Ga0265316_10122916 3300031344 Bacteria 1959
127 Ga0265316_10146247 3300031344 Bacteria 1772
128 Ga0265316_10239833 3300031344 Bacteria 1333
129 Ga0265314_10032106 3300031711 Bacteria 3867
130 Ga0265314_10141500 3300031711 Bacteria 1486
131 Ga0265342_10030500 3300031712 Bacteria 3341
132 Ga0373954_0148808 3300035118 Unclassified 1144
133 Ga0373943_0037768 3300035170 Bacteria 2319
134 Ga0373946_0028780 3300035171 Bacteria 2206
135 Ga0373955_0188729 3300035172 Bacteria 1225
136 Ga0373935_0026639 3300035692 Bacteria 3571
137 Ga0373935_0035078 3300035692 Unclassified 3130
138 Ga0373935_0052178 3300035692 Bacteria 2599
139 Ga0373927_0002327 3300035695 Bacteria 13880
140 Ga0373927_0006903 3300035695 Bacteria 7715
141 Ga0373927_0025703 3300035695 Bacteria 3849
142 Ga0373927_0043829 3300035695 Bacteria 2895
143 Ga0373947_0000673 3300035725 Bacteria 20315
144 Ga0373947_0072197 3300035725 Bacteria 2119
145 Ga0373937_0037333 3300036401 Bacteria 4427
146 Ga0373937_0101566 3300036401 Bacteria 2669
147 Ga0373937_0111507 3300036401 Bacteria 2545
148 Ga0373925_0000027 3300037068 Bacteria 154706
149 Ga0373925_0094873 3300037068 Bacteria 2285
150 Ga0373925_0146279 3300037068 Bacteria 1853
151 Ga0373925_0192748 3300037068 Bacteria 1618
152 Ga0373925_0324042 3300037068 Bacteria 1247
153 Ga0373925_0332992 3300037068 Bacteria 1230
154 Ga0395899_0104042 3300037312 Unclassified 2047
155 Ga0395900_0212159 3300037418 Bacteria 1955
156 Ga0436364_0014102 3300037853 Bacteria 2674
157 Ga0436364_0114792 3300037853 Bacteria 31761
158 Ga0436364_0129406 3300037853 Bacteria 129389
159 Ga0436364_0291184 3300037853 Bacteria 2902
160 Ga0436364_0564144 3300037853 Bacteria 1098
161 Ga0436364_0667265 3300037853 Bacteria 3010
162 Ga0436364_0689903 3300037853 Bacteria 3667
163 Ga0436364_0763303 3300037853 Bacteria 8829
164 Ga0436364_1024136 3300037853 Bacteria 10258
165 Ga0436364_1256146 3300037853 Bacteria 8018
166 Ga0436364_1479767 3300037853 Bacteria 2048
167 Ga0436364_1532132 3300037853 Bacteria 4644
168 Ga0436365_0237176 3300039437 Bacteria 1048
169 Ga0436365_0252009 3300039437 Bacteria 5950
170 Ga0436365_0813603 3300039437 Bacteria 2075
171 Ga0436365_0893118 3300039437 Bacteria 6822
172 Ga0436365_1188667 3300039437 Unclassified 2675
173 Ga0436365_1736507 3300039437 Bacteria 2139
174 Ga0436365_1851093 3300039437 Unclassified 2169
175 Ga0436361_0754359 3300039447 Bacteria 78520
176 Ga0436363_0622934 3300039450 Bacteria 4827
177 Ga0436363_0775032 3300039450 Bacteria 4076
178 Ga0436362_0140637 3300039453 Unclassified 1946
179 Ga0436362_0511750 3300039453 Bacteria 2111
180 Ga0436362_0983593 3300039453 Bacteria 2771
181 Ga0453683_0196392 3300044673 Bacteria 1281
182 Ga0453683_0241401 3300044673 Bacteria 1151
183 Ga0453684_0221095 3300044712 Bacteria 2194
184 Ga0451576_0229333 3300045051 Bacteria 1939
185 Ga0466958_0118116 3300045836 Bacteria 1659
186 Ga0466958_0279683 3300045836 Unclassified 1069
187 Ga0495580_0002695 3300046472 Bacteria 15362
188 Ga0495580_0013050 3300046472 Bacteria 6359
189 Ga0495580_0035763 3300046472 Bacteria 3571
190 Ga0495580_0153545 3300046472 Bacteria 1595
191 Ga0495580_0156585 3300046472 Bacteria 1577
192 Ga0495664_0068756 3300046477 Bacteria 2114
193 Ga0495630_0431056 3300046517 Bacteria 1010
194 Ga0495640_0065380 3300046533 Unclassified 2456
195 Ga0495667_0033621 3300046559 Bacteria 3431
196 Ga0495623_0052017 3300046679 Bacteria 2590
197 Ga0495623_0059301 3300046679 Bacteria 2404
198 Ga0495604_0038395 3300047317 Bacteria 3767
199 Ga0495674_0005655 3300047319 Bacteria 11974
200 Ga0495674_0066980 3300047319 Unclassified 3113
201 Ga0495684_0000817 3300047471 Bacteria 25175
202 Ga0495684_0069870 3300047471 Bacteria 2670
203 Ga0495602_0023306 3300048088 Bacteria 6034
204 Ga0496112_0025052 3300048915 Bacteria 5724
205 Ga0501043_0188800 3300049579 Unclassified 1603
206 Ga0501047_0011596 3300049581 Bacteria 8341
207 Ga0501070_0004195 3300049586 Bacteria 12401
208 Ga0501075_0335752 3300049591 Bacteria 1152
209 Ga0501079_0307816 3300049741 Bacteria 1240
210 Ga0501080_0169998 3300049742 Unclassified 2011
211 Ga0501035_0058093 3300049822 Unclassified 3448
212 Ga0501035_0181673 3300049822 Bacteria 1812
213 Ga0501044_0002734 3300049823 Bacteria 20061
214 Ga0501044_0394943 3300049823 Unclassified 1296
215 nmdc:mga05p37_836870_c1 3300050507 Bacteria 1001
216 nmdc:mga0qj67_150655_c1 3300050509 Unclassified 1887
217 nmdc:mga08x19_129008_c1 3300050514 Unclassified 1699
218 nmdc:mga08x19_683_c1 3300050514 Bacteria 21766
219 Ga0501082_0001024 3300060353 Bacteria 24724
220 Ga0213876_10023237
221 Ga0070683_100000430
222 Ga0070683_100336931
223 Ga0070683_100696520
224 Ga0070666_10229358
225 Ga0070680_100124666
226 Ga0068868_100288759
227 Ga0070689_100033129
228 Ga0070689_100097964
229 Ga0070661_100098023
230 Ga0070673_100071767
231 Ga0070659_100036324
232 Ga0070714_100002284
233 Ga0070714_100112461
234 Ga0070714_100172401
235 Ga0070713_100015068
236 Ga0070711_100056470
237 Ga0070711_100174075
238 Ga0070663_100217021
239 Ga0070678_100284662
240 Ga0070681_10002496
241 Ga0070681_10120252
242 Ga0070685_10091199
243 Ga0070679_100181129
244 Ga0070684_100000418
245 Ga0068853_100057927
246 Ga0068853_100354128
247 Ga0070695_100324996
248 Ga0070665_100257260
249 Ga0068855_100158035
250 Ga0068855_100215725
251 Ga0068855_100389034
252 Ga0068856_100036464
253 Ga0068856_100041405
254 Ga0068856_100313911
255 Ga0068852_100106760
256 Ga0068864_100170370
257 Ga0068870_10224722
258 Ga0068863_100050430
259 Ga0068858_100515640
260 Ga0081455_10028768
261 Ga0070717_10007063
262 Ga0070717_10010184
263 Ga0070717_10023133
264 Ga0070717_10039977
265 Ga0097621_100536978
266 Ga0068871_100188356
267 Ga0075430_100055885
268 Ga0075430_100229586
269 Ga0075436_100006868
270 Ga0105240_10001227
271 Ga0105240_10033016
272 Ga0105240_10048842
273 Ga0105240_10141101
274 Ga0105240_10290913
275 Ga0111539_10723325
276 Ga0105245_10343649
277 Ga0114129_11223560
278 Ga0105248_10044944
279 Ga0105248_10088823
280 Ga0105248_10196337
281 Ga0105248_10245773
282 Ga0105237_10005387
283 Ga0105237_10097425
284 Ga0105237_10157946
285 Ga0105249_10731281
286 Ga0105239_10060555
287 Ga0105239_10693047
288 Ga0105246_10066892
289 Ga0157373_10375841
290 Ga0157370_10063766
291 Ga0157370_10329383
292 Ga0157370_10408929
293 Ga0157370_10580793
294 Ga0157369_10021371
295 Ga0157369_10125784
296 Ga0157369_10142608
297 Ga0157369_10330319
298 Ga0157374_10008875
299 Ga0157374_10168545
300 Ga0163162_10281676
301 Ga0157375_10876312
302 Ga0163163_10108379
303 Ga0213876_10051556
304 Ga0213875_10006350
305 Ga0213875_10012197
306 Ga0213875_10014941
307 Ga0213875_10033045
308 Ga0213875_10045800
309 Ga0207680_10194751
310 Ga0207707_10042072
311 Ga0207707_10191622
312 Ga0207695_10018683
313 Ga0207695_10048406
314 Ga0207660_10087848
315 Ga0207649_10127159
316 Ga0207652_10224285
317 Ga0207700_10015381
318 Ga0207664_10033446
319 Ga0207664_10247031
320 Ga0207664_10406759
321 Ga0207644_10324613
322 Ga0207690_10122241
323 Ga0207670_10024003
324 Ga0207670_10051150
325 Ga0207711_10037118
326 Ga0207711_10084389
327 Ga0207661_10001744
328 Ga0207679_10052467
329 Ga0207667_10355296
330 Ga0207651_10053904
331 Ga0207677_10259036
332 Ga0207703_10032017
333 Ga0207639_10095968
334 Ga0207702_10013284
335 Ga0207702_10089650
336 Ga0207641_10111396
337 Ga0207676_10160584
338 Ga0207698_10126658
339 Ga0265323_10000393
340 Ga0265338_10133576
341 Ga0265330_10078757
342 Ga0265331_10027226
343 Ga0265316_10008020
344 Ga0265316_10034336
345 Ga0265316_10122916
346 Ga0265316_10146247
347 Ga0265316_10239833
348 Ga0265314_10032106
349 Ga0265314_10141500
350 Ga0265342_10030500
351 Ga0373954_0148808
352 Ga0373943_0037768
353 Ga0373946_0028780
354 Ga0373955_0188729
355 Ga0373935_0026639
356 Ga0373935_0035078
357 Ga0373935_0052178
358 Ga0373927_0002327
359 Ga0373927_0006903
360 Ga0373927_0025703
361 Ga0373927_0043829
362 Ga0373947_0000673
363 Ga0373947_0072197
364 Ga0373937_0037333
365 Ga0373937_0101566
366 Ga0373937_0111507
367 Ga0373925_0000027
368 Ga0373925_0094873
369 Ga0373925_0146279
370 Ga0373925_0192748
371 Ga0373925_0324042
372 Ga0373925_0332992
373 Ga0395899_0104042
374 Ga0395900_0212159
375 Ga0436364_0014102
376 Ga0436364_0114792
377 Ga0436364_0129406
378 Ga0436364_0291184
379 Ga0436364_0564144
380 Ga0436364_0667265
381 Ga0436364_0689903
382 Ga0436364_0763303
383 Ga0436364_1024136
384 Ga0436364_1256146
385 Ga0436364_1479767
386 Ga0436364_1532132
387 Ga0436365_0237176
388 Ga0436365_0252009
389 Ga0436365_0813603
390 Ga0436365_0893118
391 Ga0436365_1188667
392 Ga0436365_1736507
393 Ga0436365_1851093
394 Ga0436361_0754359
395 Ga0436363_0622934
396 Ga0436363_0775032
397 Ga0436362_0140637
398 Ga0436362_0511750
399 Ga0436362_0983593
400 Ga0453683_0196392
401 Ga0453683_0241401
402 Ga0453684_0221095
403 Ga0451576_0229333
404 Ga0466958_0118116
405 Ga0466958_0279683
406 Ga0495580_0002695
407 Ga0495580_0013050
408 Ga0495580_0035763
409 Ga0495580_0153545
410 Ga0495580_0156585
411 Ga0495664_0068756
412 Ga0495630_0431056
413 Ga0495640_0065380
414 Ga0495667_0033621
415 Ga0495623_0052017
416 Ga0495623_0059301
417 Ga0495604_0038395
418 Ga0495674_0005655
419 Ga0495674_0066980
420 Ga0495684_0000817
421 Ga0495684_0069870
422 Ga0495602_0023306
423 Ga0496112_0025052
424 Ga0501043_0188800
425 Ga0501047_0011596
426 Ga0501070_0004195
427 Ga0501075_0335752
428 Ga0501079_0307816
429 Ga0501080_0169998
430 Ga0501035_0058093
431 Ga0501035_0181673
432 Ga0501044_0002734
433 Ga0501044_0394943
434 nmdc:mga05p37_836870_c1
435 nmdc:mga0qj67_150655_c1
436 nmdc:mga08x19_129008_c1
437 nmdc:mga08x19_683_c1
438 Ga0501082_0001024

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01040

UbiA

UbiA prenyltransferase family

49

302

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bpu-assembly1.cif.gz_A structural and mechanistic insights into the biosynthesis of digeranylgeranylglyceryl phosphate synthase in membranes 0.8327 2 288
7bpu-assembly1.cif.gz_A structural and mechanistic insights into the biosynthesis of digeranylgeranylglyceryl phosphate synthase in membranes 0.8088 2 288
4od4-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7699 16 287
4od4-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7426 16 287
4tq5-assembly1.cif.gz_A structure of a ubia homolog from archaeoglobus fulgidus 0.6899 3 285
ID Description Score Start End Superfamily
af_I1NJ83_69_223_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9592 8 168 1.10.357.140
af_F1LVF4_158_307_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9495 8 165 1.10.357.140
af_F1LVF4_308_442_1.20.120.550 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Membrane associated eicosanoid/glutathione metabolism-like domain 0.9473 168 290 1.20.120.550
af_Q54JB3_152_315_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.947 8 178 1.10.357.140
af_Q12887_160_330_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9432 8 186 1.10.357.140
ID Description Score Start End GO Terms
AF-A0A3N5ZFC0-F1-model_v4 Protoheme IX farnesyltransferase (EC 2.5.1.141) (Heme B farnesyltransferase) (Heme O synthase) 0.9937 106 288 GO:0006783
GO:0008495
GO:0016020
AF-A0A2V7A3M5-F1-model_v4 Protoheme IX farnesyltransferase (EC 2.5.1.141) (Heme B farnesyltransferase) (Heme O synthase) 0.9902 97 289 GO:0005886
GO:0006783
GO:0008495
AF-A0A7W1HEP4-F1-model_v4 Protoheme IX farnesyltransferase (EC 2.5.1.141) (Heme B farnesyltransferase) (Heme O synthase) 0.9897 118 290 GO:0005886
GO:0006783
GO:0008495
AF-A0A534TY29-F1-model_v4 heme o synthase (EC 2.5.1.141) 0.9879 95 290 GO:0006784
GO:0008495
GO:0016020
AF-A0A847I440-F1-model_v4 heme o synthase (EC 2.5.1.141) 0.9865 102 288 GO:0006784
GO:0008495
GO:0016020

Map