F331110

General Info

Members Datasets Scaffolds Average Seq Length
219 137 436 291

Family's Representative Sequence

Representative Sequence 3300014325|Ga0163163_10177321|Ga0163163_101773212
Length 353
Sequence LSEINFGRQLPFVRTPFVVAHIAGVPEIRYDLKTAYNSQRGRLISLPDDRSEDYRRMKSRELFRLSFICLAALGAISVAACSEKTDTTPPVATPSLALSHDRAPAGSPLELTYKFVVANDAHLTEDYRVFVHIVDTDEEQMWTDDHNPPVPTSQWKPGQTVEYSRTIFVPVFPYVGDATVQMGLHSTKDQKRLTLGGEDVGQHAYKVAKLQLLPQTDNLFTVFKDGWNPAEAAAQDSAVEWQWTKKQATLAFKNPKKDAVLYFDADSPQPELHPAQHVQISLGGQVLEDYTLAPEKRELRKIKLPGSLMGAADLSELQISVDPTFVPMTVTNGTSKDPRELGIRVFHAYVDPR

Samples

Sample ID Description Type Environment
1 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
84 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
85 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
86 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
87 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
92 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
95 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
96 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
97 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
105 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
117 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
121 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
133 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
134 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
135 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
136 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
137 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.91
Nodule 0
Rhizoplane 5.02
Rhizosphere 94.06
Stem 0
Stem Tuber 0
Unclassified 9.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163163_10177321 3300014325 Unclassified 2178
2 Ga0065712_10071358 3300005290 Bacteria 5320
3 Ga0065712_10109533 3300005290 Bacteria 1848
4 Ga0065715_10133910 3300005293 Bacteria 1944
5 Ga0065707_10113145 3300005295 Bacteria 2337
6 Ga0065707_10272852 3300005295 Unclassified 1067
7 Ga0070676_10030504 3300005328 Bacteria 3075
8 Ga0070670_100009064 3300005331 Bacteria 8502
9 Ga0070670_100589224 3300005331 Unclassified 994
10 Ga0068869_100156218 3300005334 Bacteria 1773
11 Ga0068868_100290666 3300005338 Bacteria 1385
12 Ga0070668_100129837 3300005347 Bacteria 2022
13 Ga0070669_100123496 3300005353 Bacteria 1979
14 Ga0070675_100202047 3300005354 Bacteria 1725
15 Ga0070675_100254015 3300005354 Unclassified 1539
16 Ga0070674_100039197 3300005356 Bacteria 3198
17 Ga0070673_100255690 3300005364 Bacteria 1528
18 Ga0070688_100178097 3300005365 Bacteria 1473
19 Ga0070667_100020607 3300005367 Bacteria 5473
20 Ga0070709_10207999 3300005434 Bacteria 1389
21 Ga0070713_100059920 3300005436 Bacteria 3181
22 Ga0070713_100319392 3300005436 Bacteria 1434
23 Ga0070700_100252211 3300005441 Unclassified 1266
24 Ga0070694_100012423 3300005444 Bacteria 5294
25 Ga0070708_100211295 3300005445 Bacteria 1818
26 Ga0070663_100319898 3300005455 Unclassified 1247
27 Ga0070681_10008059 3300005458 Bacteria 10310
28 Ga0070681_10053050 3300005458 Bacteria 4041
29 Ga0068867_100030874 3300005459 Bacteria 3866
30 Ga0070707_100085286 3300005468 Bacteria 3053
31 Ga0070707_100091861 3300005468 Bacteria 2939
32 Ga0070707_100126565 3300005468 Bacteria 2483
33 Ga0070707_100554581 3300005468 Bacteria 1111
34 Ga0070698_100114262 3300005471 Bacteria 2665
35 Ga0070698_100132817 3300005471 Unclassified 2444
36 Ga0070698_100444904 3300005471 Bacteria 1231
37 Ga0070679_100194134 3300005530 Bacteria 1998
38 Ga0070672_100205437 3300005543 Bacteria 1648
39 Ga0070686_100039726 3300005544 Bacteria 2933
40 Ga0070686_100220274 3300005544 Bacteria 1371
41 Ga0070695_100031763 3300005545 Bacteria 3297
42 Ga0070695_100166652 3300005545 Unclassified 1551
43 Ga0068855_100488104 3300005563 Bacteria 1340
44 Ga0068859_100076876 3300005617 Bacteria 3379
45 Ga0068859_100166205 3300005617 Bacteria 2286
46 Ga0068863_100188884 3300005841 Bacteria 1980
47 Ga0068858_100033210 3300005842 Bacteria 4791
48 Ga0068858_100350588 3300005842 Bacteria 1414
49 Ga0068860_100083904 3300005843 Unclassified 3030
50 Ga0068860_100348569 3300005843 Bacteria 1457
51 Ga0081455_10040800 3300005937 Bacteria 4090
52 Ga0081538_10002689 3300005981 Bacteria 17106
53 Ga0070717_10038041 3300006028 Bacteria 3910
54 Ga0070717_10328915 3300006028 Unclassified 1363
55 Ga0075364_10036857 3300006051 Bacteria 3163
56 Ga0097621_100011252 3300006237 Bacteria 6586
57 Ga0097621_100122963 3300006237 Bacteria 2203
58 Ga0068871_100009994 3300006358 Bacteria 6896
59 Ga0068871_100112500 3300006358 Bacteria 2291
60 Ga0075428_100114360 3300006844 Bacteria 2940
61 Ga0075430_100273833 3300006846 Bacteria 1397
62 Ga0075431_100028909 3300006847 Bacteria 5700
63 Ga0075433_10126483 3300006852 Bacteria 2270
64 Ga0075433_10140450 3300006852 Bacteria 2147
65 Ga0075433_10208697 3300006852 Bacteria 1736
66 Ga0075429_100105878 3300006880 Bacteria 2457
67 Ga0097620_100076875 3300006931 Bacteria 3379
68 Ga0097620_100166195 3300006931 Bacteria 2286
69 Ga0075435_100348622 3300007076 Unclassified 1269
70 Ga0111539_10004511 3300009094 Bacteria 18209
71 Ga0111539_10048151 3300009094 Bacteria 5091
72 Ga0111539_10102158 3300009094 Bacteria 3365
73 Ga0105245_10008940 3300009098 Bacteria 8739
74 Ga0114129_10014905 3300009147 Bacteria 11075
75 Ga0114129_10023272 3300009147 Bacteria 8787
76 Ga0114129_10024385 3300009147 Bacteria 8571
77 Ga0114129_10098636 3300009147 Bacteria 4044
78 Ga0105242_10047360 3300009176 Bacteria 3490
79 Ga0105242_10182326 3300009176 Bacteria 1853
80 Ga0105248_10056678 3300009177 Bacteria 4396
81 Ga0105248_10095554 3300009177 Bacteria 3346
82 Ga0105248_10110606 3300009177 Bacteria 3098
83 Ga0105248_10169885 3300009177 Bacteria 2458
84 Ga0105248_10402509 3300009177 Bacteria 1541
85 Ga0105248_10417331 3300009177 Bacteria 1511
86 Ga0105238_10496832 3300009551 Unclassified 1220
87 Ga0105249_10343867 3300009553 Bacteria 1509
88 Ga0157374_10601155 3300013296 Bacteria 1110
89 Ga0157378_10418161 3300013297 Bacteria 1324
90 Ga0163162_10174967 3300013306 Bacteria 2272
91 Ga0157375_10122269 3300013308 Bacteria 2714
92 Ga0157379_10142097 3300014968 Bacteria 2164
93 Ga0157376_10024231 3300014969 Bacteria 4761
94 Ga0157376_10181190 3300014969 Bacteria 1926
95 Ga0207680_10186341 3300025903 Bacteria 1406
96 Ga0207680_10211005 3300025903 Bacteria 1327
97 Ga0207645_10031921 3300025907 Bacteria 3386
98 Ga0207707_10005120 3300025912 Bacteria 11492
99 Ga0207707_10038598 3300025912 Bacteria 4173
100 Ga0207662_10039102 3300025918 Bacteria 2782
101 Ga0207652_10105186 3300025921 Bacteria 2497
102 Ga0207646_10342368 3300025922 Bacteria 1351
103 Ga0207681_10027106 3300025923 Bacteria 3702
104 Ga0207650_10057403 3300025925 Bacteria 2895
105 Ga0207650_10150118 3300025925 Bacteria 1839
106 Ga0207700_10064820 3300025928 Bacteria 2785
107 Ga0207644_10045449 3300025931 Bacteria 3124
108 Ga0207665_10096875 3300025939 Bacteria 2053
109 Ga0207691_10171606 3300025940 Bacteria 1899
110 Ga0207711_10073898 3300025941 Bacteria 2964
111 Ga0207711_10476204 3300025941 Bacteria 1163
112 Ga0207689_10042939 3300025942 Bacteria 3738
113 Ga0207689_10091504 3300025942 Bacteria 2499
114 Ga0207667_10169615 3300025949 Bacteria 2243
115 Ga0207651_10240213 3300025960 Bacteria 1476
116 Ga0207651_10429511 3300025960 Bacteria 1129
117 Ga0207678_10357271 3300026067 Unclassified 1260
118 Ga0207708_10307097 3300026075 Unclassified 1291
119 Ga0207648_10010624 3300026089 Bacteria 8705
120 Ga0207648_10288311 3300026089 Bacteria 1469
121 Ga0207683_10173323 3300026121 Bacteria 1954
122 Ga0207683_10205681 3300026121 Bacteria 1790
123 Ga0207428_10103930 3300027907 Bacteria 2193
124 Ga0268264_10198735 3300028381 Bacteria 1833
125 Ga0268264_10560081 3300028381 Bacteria 1122
126 Ga0307405_10001810 3300031731 Bacteria 9152
127 Ga0307405_10036924 3300031731 Bacteria 2932
128 Ga0307413_10040248 3300031824 Bacteria 2726
129 Ga0307407_10029151 3300031903 Bacteria 2961
130 Ga0307412_10004131 3300031911 Bacteria 8091
131 Ga0307409_100009028 3300031995 Bacteria 6099
132 Ga0307409_100035375 3300031995 Bacteria 3659
133 Ga0307414_10116175 3300032004 Bacteria 2048
134 Ga0307411_10001148 3300032005 Bacteria 10386
135 Ga0307411_10138449 3300032005 Bacteria 1791
136 Ga0373923_0076598 3300035111 Bacteria 1445
137 Ga0373962_0048991 3300035242 Bacteria 1213
138 Ga0373931_0099311 3300035691 Bacteria 1635
139 Ga0373937_0011633 3300036401 Bacteria 7726
140 Ga0373937_0304193 3300036401 Bacteria 1507
141 Ga0495633_0178864 3300046558 Unclassified 977
142 Ga0495634_0100697 3300046642 Bacteria 1867
143 Ga0496100_0036379 3300048903 Bacteria 3105
144 Ga0496101_0017630 3300048904 Bacteria 4844
145 Ga0496104_0240850 3300048907 Unclassified 1721
146 Ga0496106_0249496 3300048909 Bacteria 1419
147 Ga0496107_0068833 3300048910 Bacteria 2569
148 Ga0496107_0257462 3300048910 Bacteria 1299
149 Ga0496108_0498284 3300048911 Unclassified 1064
150 Ga0496110_0193735 3300048913 Bacteria 1845
151 Ga0496110_0545607 3300048913 Bacteria 1054
152 Ga0496112_0071154 3300048915 Bacteria 3438
153 Ga0496114_0000128 3300048917 Bacteria 54547
154 Ga0501032_0003597 3300049569 Bacteria 11804
155 Ga0501032_0011118 3300049569 Bacteria 6470
156 Ga0501032_0274837 3300049569 Unclassified 1091
157 Ga0501033_0033859 3300049570 Bacteria 3835
158 Ga0501034_0021153 3300049571 Bacteria 6635
159 Ga0501034_0024656 3300049571 Bacteria 6117
160 Ga0501034_0036455 3300049571 Bacteria 4982
161 Ga0501034_0202535 3300049571 Bacteria 1942
162 Ga0501036_0026764 3300049572 Bacteria 4872
163 Ga0501036_0290673 3300049572 Bacteria 1367
164 Ga0501037_0224493 3300049573 Bacteria 1320
165 Ga0501037_0262948 3300049573 Unclassified 1205
166 Ga0501038_0005212 3300049574 Bacteria 12096
167 Ga0501038_0254026 3300049574 Bacteria 1391
168 Ga0501039_0020323 3300049575 Bacteria 5090
169 Ga0501039_0030932 3300049575 Bacteria 4127
170 Ga0501043_0004443 3300049579 Bacteria 11394
171 Ga0501043_0298915 3300049579 Bacteria 1230
172 Ga0501046_0008166 3300049580 Bacteria 9145
173 Ga0501046_0033124 3300049580 Bacteria 4178
174 Ga0501047_0003601 3300049581 Bacteria 14607
175 Ga0501047_0046450 3300049581 Bacteria 4197
176 Ga0501047_0078823 3300049581 Bacteria 3167
177 Ga0501047_0153708 3300049581 Bacteria 2175
178 Ga0501047_0241294 3300049581 Bacteria 1658
179 Ga0501047_0338375 3300049581 Bacteria 1343
180 Ga0501048_0065232 3300049582 Bacteria 2575
181 Ga0501067_0120228 3300049583 Bacteria 1461
182 Ga0501068_0010619 3300049584 Bacteria 5180
183 Ga0501072_0083496 3300049588 Bacteria 2532
184 Ga0501073_0009838 3300049589 Bacteria 7038
185 Ga0501073_0030148 3300049589 Bacteria 3874
186 Ga0501073_0188730 3300049589 Bacteria 1426
187 Ga0501074_0150195 3300049590 Bacteria 1666
188 Ga0501076_0259751 3300049592 Bacteria 1422
189 Ga0501080_0047473 3300049742 Bacteria 3997
190 Ga0501080_0070721 3300049742 Bacteria 3245
191 Ga0501080_0438986 3300049742 Bacteria 1171
192 Ga0501083_0081888 3300049744 Bacteria 2139
193 Ga0501083_0086178 3300049744 Bacteria 2077
194 Ga0501044_0001990 3300049823 Bacteria 23608
195 Ga0501044_0004998 3300049823 Bacteria 14800
196 Ga0501044_0530150 3300049823 Bacteria 1076
197 nmdc:mga05p37_121453_c1 3300050507 Unclassified 3209
198 nmdc:mga05p37_327411_c1 3300050507 Bacteria 1811
199 nmdc:mga05p37_9515_c1 3300050507 Bacteria 11506
200 nmdc:mga0qj67_278383_c1 3300050509 Bacteria 1356
201 nmdc:mga06r32_196747_c1 3300050510 Bacteria 2003
202 nmdc:mga08y16_2846_c1 3300050511 Bacteria 17786
203 nmdc:mga08y16_3277_c1 3300050511 Bacteria 16774
204 nmdc:mga08y16_94821_c1 3300050511 Bacteria 3109
205 nmdc:mga0n895_162972_c1 3300050512 Bacteria 2261
206 nmdc:mga0n895_468821_c1 3300050512 Bacteria 1270
207 nmdc:mga0rr50_217852_c1 3300050513 Bacteria 1575
208 nmdc:mga0a205_219969_c1 3300050515 Bacteria 1785
209 Ga0495619_0023608 3300053085 Bacteria 3944
210 Ga0500641_0001066 3300053096 Bacteria 9777
211 Ga0501084_0007635 3300054114 Bacteria 8919
212 Ga0501084_0275603 3300054114 Bacteria 1420
213 Ga0590075_001669 3300059424 Bacteria 5463
214 Ga0590075_009423 3300059424 Bacteria 2339
215 Ga0590077_000104 3300059426 Bacteria 22137
216 Ga0590077_007759 3300059426 Bacteria 2191
217 Ga0501082_0027810 3300060353 Bacteria 4870
218 Ga0501082_0416259 3300060353 Bacteria 1173
219 Ga0163163_10177321
220 Ga0065712_10071358
221 Ga0065712_10109533
222 Ga0065715_10133910
223 Ga0065707_10113145
224 Ga0065707_10272852
225 Ga0070676_10030504
226 Ga0070670_100009064
227 Ga0070670_100589224
228 Ga0068869_100156218
229 Ga0068868_100290666
230 Ga0070668_100129837
231 Ga0070669_100123496
232 Ga0070675_100202047
233 Ga0070675_100254015
234 Ga0070674_100039197
235 Ga0070673_100255690
236 Ga0070688_100178097
237 Ga0070667_100020607
238 Ga0070709_10207999
239 Ga0070713_100059920
240 Ga0070713_100319392
241 Ga0070700_100252211
242 Ga0070694_100012423
243 Ga0070708_100211295
244 Ga0070663_100319898
245 Ga0070681_10008059
246 Ga0070681_10053050
247 Ga0068867_100030874
248 Ga0070707_100085286
249 Ga0070707_100091861
250 Ga0070707_100126565
251 Ga0070707_100554581
252 Ga0070698_100114262
253 Ga0070698_100132817
254 Ga0070698_100444904
255 Ga0070679_100194134
256 Ga0070672_100205437
257 Ga0070686_100039726
258 Ga0070686_100220274
259 Ga0070695_100031763
260 Ga0070695_100166652
261 Ga0068855_100488104
262 Ga0068859_100076876
263 Ga0068859_100166205
264 Ga0068863_100188884
265 Ga0068858_100033210
266 Ga0068858_100350588
267 Ga0068860_100083904
268 Ga0068860_100348569
269 Ga0081455_10040800
270 Ga0081538_10002689
271 Ga0070717_10038041
272 Ga0070717_10328915
273 Ga0075364_10036857
274 Ga0097621_100011252
275 Ga0097621_100122963
276 Ga0068871_100009994
277 Ga0068871_100112500
278 Ga0075428_100114360
279 Ga0075430_100273833
280 Ga0075431_100028909
281 Ga0075433_10126483
282 Ga0075433_10140450
283 Ga0075433_10208697
284 Ga0075429_100105878
285 Ga0097620_100076875
286 Ga0097620_100166195
287 Ga0075435_100348622
288 Ga0111539_10004511
289 Ga0111539_10048151
290 Ga0111539_10102158
291 Ga0105245_10008940
292 Ga0114129_10014905
293 Ga0114129_10023272
294 Ga0114129_10024385
295 Ga0114129_10098636
296 Ga0105242_10047360
297 Ga0105242_10182326
298 Ga0105248_10056678
299 Ga0105248_10095554
300 Ga0105248_10110606
301 Ga0105248_10169885
302 Ga0105248_10402509
303 Ga0105248_10417331
304 Ga0105238_10496832
305 Ga0105249_10343867
306 Ga0157374_10601155
307 Ga0157378_10418161
308 Ga0163162_10174967
309 Ga0157375_10122269
310 Ga0157379_10142097
311 Ga0157376_10024231
312 Ga0157376_10181190
313 Ga0207680_10186341
314 Ga0207680_10211005
315 Ga0207645_10031921
316 Ga0207707_10005120
317 Ga0207707_10038598
318 Ga0207662_10039102
319 Ga0207652_10105186
320 Ga0207646_10342368
321 Ga0207681_10027106
322 Ga0207650_10057403
323 Ga0207650_10150118
324 Ga0207700_10064820
325 Ga0207644_10045449
326 Ga0207665_10096875
327 Ga0207691_10171606
328 Ga0207711_10073898
329 Ga0207711_10476204
330 Ga0207689_10042939
331 Ga0207689_10091504
332 Ga0207667_10169615
333 Ga0207651_10240213
334 Ga0207651_10429511
335 Ga0207678_10357271
336 Ga0207708_10307097
337 Ga0207648_10010624
338 Ga0207648_10288311
339 Ga0207683_10173323
340 Ga0207683_10205681
341 Ga0207428_10103930
342 Ga0268264_10198735
343 Ga0268264_10560081
344 Ga0307405_10001810
345 Ga0307405_10036924
346 Ga0307413_10040248
347 Ga0307407_10029151
348 Ga0307412_10004131
349 Ga0307409_100009028
350 Ga0307409_100035375
351 Ga0307414_10116175
352 Ga0307411_10001148
353 Ga0307411_10138449
354 Ga0373923_0076598
355 Ga0373962_0048991
356 Ga0373931_0099311
357 Ga0373937_0011633
358 Ga0373937_0304193
359 Ga0495633_0178864
360 Ga0495634_0100697
361 Ga0496100_0036379
362 Ga0496101_0017630
363 Ga0496104_0240850
364 Ga0496106_0249496
365 Ga0496107_0068833
366 Ga0496107_0257462
367 Ga0496108_0498284
368 Ga0496110_0193735
369 Ga0496110_0545607
370 Ga0496112_0071154
371 Ga0496114_0000128
372 Ga0501032_0003597
373 Ga0501032_0011118
374 Ga0501032_0274837
375 Ga0501033_0033859
376 Ga0501034_0021153
377 Ga0501034_0024656
378 Ga0501034_0036455
379 Ga0501034_0202535
380 Ga0501036_0026764
381 Ga0501036_0290673
382 Ga0501037_0224493
383 Ga0501037_0262948
384 Ga0501038_0005212
385 Ga0501038_0254026
386 Ga0501039_0020323
387 Ga0501039_0030932
388 Ga0501043_0004443
389 Ga0501043_0298915
390 Ga0501046_0008166
391 Ga0501046_0033124
392 Ga0501047_0003601
393 Ga0501047_0046450
394 Ga0501047_0078823
395 Ga0501047_0153708
396 Ga0501047_0241294
397 Ga0501047_0338375
398 Ga0501048_0065232
399 Ga0501067_0120228
400 Ga0501068_0010619
401 Ga0501072_0083496
402 Ga0501073_0009838
403 Ga0501073_0030148
404 Ga0501073_0188730
405 Ga0501074_0150195
406 Ga0501076_0259751
407 Ga0501080_0047473
408 Ga0501080_0070721
409 Ga0501080_0438986
410 Ga0501083_0081888
411 Ga0501083_0086178
412 Ga0501044_0001990
413 Ga0501044_0004998
414 Ga0501044_0530150
415 nmdc:mga05p37_121453_c1
416 nmdc:mga05p37_327411_c1
417 nmdc:mga05p37_9515_c1
418 nmdc:mga0qj67_278383_c1
419 nmdc:mga06r32_196747_c1
420 nmdc:mga08y16_2846_c1
421 nmdc:mga08y16_3277_c1
422 nmdc:mga08y16_94821_c1
423 nmdc:mga0n895_162972_c1
424 nmdc:mga0n895_468821_c1
425 nmdc:mga0rr50_217852_c1
426 nmdc:mga0a205_219969_c1
427 Ga0495619_0023608
428 Ga0500641_0001066
429 Ga0501084_0007635
430 Ga0501084_0275603
431 Ga0590075_001669
432 Ga0590075_009423
433 Ga0590077_000104
434 Ga0590077_007759
435 Ga0501082_0027810
436 Ga0501082_0416259

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
5axg-assembly1.cif.gz_B crystal structure of thermophilic dextranase from thermoanaerobacter pseudethanolicus 0.7941 37 154
7l2z-assembly1.cif.gz_F bacterial cellulose synthase bcsb hexamer 0.7113 189 288
5axh-assembly1.cif.gz_A crystal structure of thermophilic dextranase from thermoanaerobacter pseudethanolicus, d312g mutant in complex with isomaltohexaose 0.7053 37 158
7l2z-assembly1.cif.gz_C bacterial cellulose synthase bcsb hexamer 0.7052 188 286
8dl0-assembly1.cif.gz_C cryoem structure of the nucleotide-free and open channel a.aeolicus wzmwzt transporter 0.6877 36 156
ID Description Score Start End Superfamily
3wnkA01 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7417 38 154 2.60.40.10
af_A0A1D6F9G8_47_167_2.60.40.770 Mainly Beta;Sandwich;Immunoglobulin-like; 0.7353 27 155 2.60.40.770
af_P20742_453_559_2.60.40.1930 Mainly Beta;Sandwich;Immunoglobulin-like;Macroglobulin (MG2) domain 0.7262 35 155 2.60.40.1930
af_A8K2U0_451_556_2.60.40.1930 Mainly Beta;Sandwich;Immunoglobulin-like;Macroglobulin (MG2) domain 0.718 35 155 2.60.40.1930
af_C6T049_37_160_2.60.40.770 Mainly Beta;Sandwich;Immunoglobulin-like; 0.7179 29 155 2.60.40.770
ID Description Score Start End GO Terms
AF-A0A3D4FST6-F1-model_v4 Uncharacterized protein 0.9659 181 289
AF-A0A2V8IX27-F1-model_v4 Uncharacterized protein 0.9504 15 289
AF-A0A2V7TPE8-F1-model_v4 Uncharacterized protein 0.9447 164 289
AF-A0A1F2UZH3-F1-model_v4 Uncharacterized protein 0.9437 34 287
AF-A0A2V8IX27-F1-model_v4 Uncharacterized protein 0.9403 15 289

Map