F331015

General Info

Members Datasets Scaffolds Average Seq Length
219 130 438 251

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10157021|Ga0111539_101570212
Length 273
Sequence MSAAHDPHGHGAEALMRITLKVWRQGGPDAAGRMETYRLDEVSPDMSFLEMLDVLNERLIEAGEDPVAFDHDCREGICGACSLVIDGQAHGPEALTTVCQLHMRHYSDGDTIQVEPWRANAFPVVKDLVVDRSAFDRIVAAGGFISTHTGAAPDGNSVPVPKPEADQAMDAAACIGCGACVAACPNASAMLFVGAKVAHLALLPQGEPERERRVLAMVRTMDAEGFGNCTNHFECMAACPKGISVENIALMNREYLRAFLRERPAEGGEASGG

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
50 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
51 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
54 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
55 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
58 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
59 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
60 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
61 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
62 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
63 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
64 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
65 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
69 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
70 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
71 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
74 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
78 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
79 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
80 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
81 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
84 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
85 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
91 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
92 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
93 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
96 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
97 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
98 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
99 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
100 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
101 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
102 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
103 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
104 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
105 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
106 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
107 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
108 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
109 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
110 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
111 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
112 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
113 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
114 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
115 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
116 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
117 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
118 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
119 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
120 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
121 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
122 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
123 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
124 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
125 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
126 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
127 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
128 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
129 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
130 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 88.13
Metatranscriptomes 1.37
Isolates 10.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.65
Nodule 1.83
Rhizoplane 0
Rhizosphere 81.74
Stem 0
Stem Tuber 0
Unclassified 2.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10157021 3300009094 Bacteria 2662
2 JGI25160J50197_1010590 3300003354 Bacteria 3321
3 Ga0070658_10163139 3300005327 Bacteria 1870
4 Ga0070683_100327657 3300005329 Bacteria 1458
5 Ga0070689_100086472 3300005340 Bacteria 2466
6 Ga0070668_100003084 3300005347 Bacteria 12315
7 Ga0070668_100018891 3300005347 Bacteria 5178
8 Ga0070711_100000092 3300005439 Bacteria 49205
9 Ga0070663_100432554 3300005455 Bacteria 1081
10 Ga0070706_100617977 3300005467 Bacteria 1006
11 Ga0070707_100397164 3300005468 Bacteria 1339
12 Ga0070665_100264157 3300005548 Bacteria 1722
13 Ga0068855_100008170 3300005563 Bacteria 12652
14 Ga0068856_100032013 3300005614 Bacteria 5147
15 Ga0068856_100573433 3300005614 Bacteria 1150
16 Ga0068852_100126989 3300005616 Bacteria 2343
17 Ga0068859_100143464 3300005617 Bacteria 2462
18 Ga0068858_100319809 3300005842 Bacteria 1483
19 Ga0068862_100768294 3300005844 Bacteria 939
20 Ga0081539_10011257 3300005985 Bacteria 7109
21 Ga0070717_10195129 3300006028 Bacteria 1771
22 Ga0075368_10000626 3300006042 Bacteria 10696
23 Ga0075428_100000935 3300006844 Bacteria 30877
24 Ga0075431_100313826 3300006847 Bacteria 1582
25 Ga0075434_100073368 3300006871 Bacteria 3415
26 Ga0097620_100143464 3300006931 Bacteria 2462
27 Ga0105240_10017100 3300009093 Bacteria 9793
28 Ga0111539_10034635 3300009094 Bacteria 6119
29 Ga0111539_10515514 3300009094 Bacteria 1393
30 Ga0105241_10002962 3300009174 Bacteria 12676
31 Ga0105248_10255518 3300009177 Bacteria 1972
32 Ga0105237_10036237 3300009545 Bacteria 4990
33 Ga0105238_10010344 3300009551 Bacteria 9361
34 Ga0105249_10201213 3300009553 Bacteria 1949
35 Ga0105239_10036947 3300010375 Bacteria 5358
36 Ga0105239_10193104 3300010375 Bacteria 2279
37 Ga0157374_10057859 3300013296 Bacteria 3622
38 Ga0163162_10046253 3300013306 Bacteria 4361
39 Ga0157375_10338950 3300013308 Bacteria 1669
40 Ga0157380_10445579 3300014326 Bacteria 1242
41 Ga0207647_10019843 3300025904 Bacteria 4514
42 Ga0207645_10346260 3300025907 Bacteria 994
43 Ga0207705_10178971 3300025909 Bacteria 1599
44 Ga0207695_10005774 3300025913 Bacteria 16294
45 Ga0207671_10000306 3300025914 Bacteria 72328
46 Ga0207694_10001047 3300025924 Bacteria 24075
47 Ga0207667_10014758 3300025949 Bacteria 8891
48 Ga0207640_10040237 3300025981 Bacteria 2964
49 Ga0207640_10581121 3300025981 Bacteria 946
50 Ga0207678_10014208 3300026067 Bacteria 7000
51 Ga0207678_10440201 3300026067 Bacteria 1132
52 Ga0207702_10033744 3300026078 Bacteria 4276
53 Ga0207702_10476146 3300026078 Bacteria 1215
54 Ga0207641_10122014 3300026088 Bacteria 2327
55 Ga0207698_10068798 3300026142 Bacteria 2797
56 Ga0268265_10033270 3300028380 Bacteria 3747
57 Ga0307517_10061286 3300028786 Bacteria 3562
58 Ga0307517_10070962 3300028786 Bacteria 3129
59 Ga0307515_10000356 3300028794 Bacteria 112492
60 Ga0307515_10019333 3300028794 Bacteria 12273
61 Ga0307512_10014040 3300030522 Bacteria 7477
62 Ga0307512_10162194 3300030522 Bacteria 1306
63 Ga0307408_100328748 3300031548 Bacteria 1290
64 Ga0307508_10005399 3300031616 Bacteria 12164
65 Ga0307508_10023730 3300031616 Bacteria 5570
66 Ga0316575_10003198 3300031665 Bacteria 5610
67 Ga0316575_10076177 3300031665 Bacteria 1350
68 Ga0316575_10126371 3300031665 Bacteria 1047
69 Ga0316579_10001008 3300031691 Bacteria 9894
70 Ga0316579_10006691 3300031691 Bacteria 4716
71 Ga0316579_10050759 3300031691 Bacteria 1940
72 Ga0316579_10077505 3300031691 Bacteria 1580
73 Ga0316579_10115649 3300031691 Bacteria 1287
74 Ga0316576_10006024 3300031727 Bacteria 7491
75 Ga0316576_10009118 3300031727 Bacteria 6389
76 Ga0316576_10012594 3300031727 Bacteria 5594
77 Ga0316576_10017268 3300031727 Bacteria 4897
78 Ga0316576_10024929 3300031727 Unclassified 4182
79 Ga0316576_10030787 3300031727 Bacteria 3802
80 Ga0316576_10036719 3300031727 Bacteria 3503
81 Ga0316576_10049180 3300031727 Bacteria 3061
82 Ga0316576_10073309 3300031727 Bacteria 2529
83 Ga0316576_10108733 3300031727 Bacteria 2077
84 Ga0316576_10123920 3300031727 Bacteria 1942
85 Ga0316576_10284262 3300031727 Bacteria 1238
86 Ga0316576_10313244 3300031727 Bacteria 1172
87 Ga0316576_10360467 3300031727 Bacteria 1081
88 Ga0316576_10444436 3300031727 Bacteria 958
89 Ga0316578_10000059 3300031728 Bacteria 23667
90 Ga0316578_10001277 3300031728 Bacteria 10071
91 Ga0316578_10029270 3300031728 Bacteria 3125
92 Ga0316578_10091434 3300031728 Bacteria 1817
93 Ga0316578_10218634 3300031728 Bacteria 1145
94 Ga0307516_10000982 3300031730 Bacteria 39431
95 Ga0316577_10000504 3300031733 Bacteria 15536
96 Ga0316577_10000602 3300031733 Bacteria 14833
97 Ga0316577_10014972 3300031733 Bacteria 4264
98 Ga0316577_10022214 3300031733 Bacteria 3522
99 Ga0316577_10097569 3300031733 Bacteria 1646
100 Ga0316577_10299876 3300031733 Unclassified 910
101 Ga0307406_10008664 3300031901 Bacteria 5682
102 Ga0307416_100419407 3300032002 Bacteria 1382
103 Ga0307416_101141954 3300032002 Bacteria 884
104 Ga0316583_10000132 3300032133 Bacteria 17554
105 Ga0316583_10012995 3300032133 Bacteria 3002
106 Ga0316583_10019198 3300032133 Bacteria 2454
107 Ga0316583_10043039 3300032133 Bacteria 1595
108 Ga0316585_10000178 3300032137 Bacteria 12997
109 Ga0316585_10003200 3300032137 Bacteria 4472
110 Ga0316585_10024326 3300032137 Bacteria 1873
111 Ga0316585_10063297 3300032137 Bacteria 1196
112 Ga0316580_10004060 3300032139 Bacteria 4218
113 Ga0316580_10016505 3300032139 Bacteria 2266
114 Ga0316580_10049343 3300032139 Bacteria 1297
115 Ga0316593_10047380 3300032168 Bacteria 1445
116 Ga0316586_1014535 3300033527 Bacteria 1244
117 Ga0316596_1004466 3300033541 Bacteria 3142
118 Ga0316574_0004556 3300035398 Bacteria 7279
119 Ga0316574_0008819 3300035398 Bacteria 5619
120 Ga0316574_0018877 3300035398 Bacteria 4060
121 Ga0316574_0028281 3300035398 Bacteria 3380
122 Ga0316574_0050883 3300035398 Bacteria 2580
123 Ga0316574_0080315 3300035398 Bacteria 2069
124 Ga0316574_0100234 3300035398 Bacteria 1853
125 Ga0316574_0124042 3300035398 Unclassified 1659
126 Ga0373935_0062292 3300035692 Bacteria 2389
127 Ga0316582_0000756 3300036647 Bacteria 12974
128 Ga0316582_0001092 3300036647 Bacteria 11437
129 Ga0316582_0002007 3300036647 Bacteria 9340
130 Ga0316582_0007641 3300036647 Bacteria 5767
131 Ga0316582_0014109 3300036647 Bacteria 4523
132 Ga0316582_0020326 3300036647 Bacteria 3902
133 Ga0316582_0042780 3300036647 Bacteria 2839
134 Ga0316582_0045033 3300036647 Bacteria 2777
135 Ga0316582_0067242 3300036647 Bacteria 2312
136 Ga0316582_0102236 3300036647 Bacteria 1899
137 Ga0316582_0210217 3300036647 Bacteria 1329
138 Ga0316582_0226350 3300036647 Bacteria 1279
139 Ga0316582_0255278 3300036647 Bacteria 1202
140 Ga0316584_0000387 3300036712 Bacteria 22769
141 Ga0316584_0000940 3300036712 Bacteria 16603
142 Ga0316584_0005887 3300036712 Bacteria 8275
143 Ga0316584_0024845 3300036712 Bacteria 4389
144 Ga0316584_0055091 3300036712 Bacteria 2977
145 Ga0316584_0067997 3300036712 Unclassified 2670
146 Ga0316584_0145255 3300036712 Bacteria 1767
147 Ga0316584_0290196 3300036712 Bacteria 1187
148 Ga0316584_0325176 3300036712 Bacteria 1108
149 Ga0316584_0394902 3300036712 Bacteria 986
150 Ga0395900_0034550 3300037418 Bacteria 5208
151 Ga0395900_0052303 3300037418 Bacteria 4205
152 Ga0316581_0005127 3300037588 Bacteria 3391
153 Ga0316581_0005656 3300037588 Bacteria 3273
154 Ga0316581_0055104 3300037588 Bacteria 1219
155 Ga0436364_0837043 3300037853 Bacteria 1132
156 Ga0395901_0162009 3300038443 Bacteria 2349
157 Ga0436365_1555877 3300039437 Bacteria 1910
158 Ga0451853_0153518 3300041512 Bacteria 2314
159 Ga0466970_0002686 3300044765 Bacteria 8583
160 Ga0466970_0010769 3300044765 Bacteria 4649
161 Ga0466957_0041696 3300044842 Bacteria 2776
162 Ga0466959_0177220 3300045049 Bacteria 1493
163 Ga0466958_0141494 3300045836 Bacteria 1515
164 Ga0466958_0440810 3300045836 Bacteria 843
165 Ga0466967_0176000 3300045976 Bacteria 2015
166 Ga0495592_0024926 3300046454 Bacteria 4545
167 Ga0495592_0202513 3300046454 Bacteria 1338
168 Ga0495603_0036517 3300046455 Bacteria 2950
169 Ga0495651_0077849 3300046462 Bacteria 2509
170 Ga0495628_0001716 3300046516 Bacteria 19967
171 Ga0495628_0002484 3300046516 Bacteria 16602
172 Ga0495628_0079686 3300046516 Unclassified 2546
173 Ga0495652_0003469 3300046529 Bacteria 15554
174 Ga0495587_0032671 3300046536 Bacteria 3145
175 Ga0495645_0026274 3300046543 Bacteria 4226
176 Ga0495667_0002873 3300046559 Bacteria 11540
177 Ga0495600_0043153 3300046809 Bacteria 2940
178 Ga0495600_0168565 3300046809 Bacteria 1414
179 Ga0495684_0011695 3300047471 Bacteria 6775
180 Ga0501034_0131530 3300049571 Bacteria 2485
181 Ga0501047_0008540 3300049581 Bacteria 9662
182 Ga0501074_0200614 3300049590 Bacteria 1422
183 nmdc:mga06r32_334428_c1 3300050510 Bacteria 1499
184 nmdc:mga08y16_28864_c1 3300050511 Bacteria 5848
185 nmdc:mga08y16_629480_c1 3300050511 Bacteria 1079
186 nmdc:mga0n895_282108_c1 3300050512 Bacteria 1684
187 nmdc:mga0n895_376725_c1 3300050512 Bacteria 1436
188 nmdc:mga0rr50_318605_c1 3300050513 Bacteria 1303
189 nmdc:mga08x19_216808_c1 3300050514 Bacteria 1314
190 Ga0495601_0214636 3300053077 Bacteria 1257
191 Ga0500583_0031599 3300053092 Bacteria 2330
192 Ga0500651_0099119 3300053093 Bacteria 1788
193 Ga0500641_0004494 3300053096 Bacteria 4928
194 Ga0500594_0001493 3300053118 Bacteria 5083
195 Ga0500652_022085 3300053131 Bacteria 2405
196 Ga0500559_0218425 3300053136 Bacteria 899
197 2772644472 2772190715 Bacteria 6959372
198 2855674640 2855670206 Bacteria 7120389
199 2855678349 2855676851 Bacteria 7063653
200 2857294788 2857288857 Bacteria 7189066
201 2858854983 2858848962 Bacteria 6963058
202 2858889231 2858888857 Bacteria 7060307
203 2858900439 2858895516 Bacteria 7378898
204 2861524934 2861520306 Bacteria 8348283
205 2869049361 2869048445 Bacteria 6875584
206 2869067162 2869061728 Bacteria 7112407
207 2869073672 2869068681 Bacteria 7205615
208 2880492306 2880489317 Bacteria 7096270
209 2880499979 2880495981 Bacteria 7340502
210 2910246761 2910245624 Bacteria 6935613
211 2912764315 2912757875 Bacteria 7940295
212 2929228540 2929226422 Bacteria 7248583
213 2995464126 2995463766 Bacteria 8577691
214 8003875254 8003870546 Bacteria 7396674
215 8025533910 8025530807 Bacteria 8495698
216 8047715499 8047710418 Bacteria 11023148
217 8054707411 8054704163 Bacteria 7247792
218 8054732277 8054727385 Bacteria 7558670
219 8054738398 8054734606 Bacteria 6947278
220 Ga0111539_10157021
221 JGI25160J50197_1010590
222 Ga0070658_10163139
223 Ga0070683_100327657
224 Ga0070689_100086472
225 Ga0070668_100003084
226 Ga0070668_100018891
227 Ga0070711_100000092
228 Ga0070663_100432554
229 Ga0070706_100617977
230 Ga0070707_100397164
231 Ga0070665_100264157
232 Ga0068855_100008170
233 Ga0068856_100032013
234 Ga0068856_100573433
235 Ga0068852_100126989
236 Ga0068859_100143464
237 Ga0068858_100319809
238 Ga0068862_100768294
239 Ga0081539_10011257
240 Ga0070717_10195129
241 Ga0075368_10000626
242 Ga0075428_100000935
243 Ga0075431_100313826
244 Ga0075434_100073368
245 Ga0097620_100143464
246 Ga0105240_10017100
247 Ga0111539_10034635
248 Ga0111539_10515514
249 Ga0105241_10002962
250 Ga0105248_10255518
251 Ga0105237_10036237
252 Ga0105238_10010344
253 Ga0105249_10201213
254 Ga0105239_10036947
255 Ga0105239_10193104
256 Ga0157374_10057859
257 Ga0163162_10046253
258 Ga0157375_10338950
259 Ga0157380_10445579
260 Ga0207647_10019843
261 Ga0207645_10346260
262 Ga0207705_10178971
263 Ga0207695_10005774
264 Ga0207671_10000306
265 Ga0207694_10001047
266 Ga0207667_10014758
267 Ga0207640_10040237
268 Ga0207640_10581121
269 Ga0207678_10014208
270 Ga0207678_10440201
271 Ga0207702_10033744
272 Ga0207702_10476146
273 Ga0207641_10122014
274 Ga0207698_10068798
275 Ga0268265_10033270
276 Ga0307517_10061286
277 Ga0307517_10070962
278 Ga0307515_10000356
279 Ga0307515_10019333
280 Ga0307512_10014040
281 Ga0307512_10162194
282 Ga0307408_100328748
283 Ga0307508_10005399
284 Ga0307508_10023730
285 Ga0316575_10003198
286 Ga0316575_10076177
287 Ga0316575_10126371
288 Ga0316579_10001008
289 Ga0316579_10006691
290 Ga0316579_10050759
291 Ga0316579_10077505
292 Ga0316579_10115649
293 Ga0316576_10006024
294 Ga0316576_10009118
295 Ga0316576_10012594
296 Ga0316576_10017268
297 Ga0316576_10024929
298 Ga0316576_10030787
299 Ga0316576_10036719
300 Ga0316576_10049180
301 Ga0316576_10073309
302 Ga0316576_10108733
303 Ga0316576_10123920
304 Ga0316576_10284262
305 Ga0316576_10313244
306 Ga0316576_10360467
307 Ga0316576_10444436
308 Ga0316578_10000059
309 Ga0316578_10001277
310 Ga0316578_10029270
311 Ga0316578_10091434
312 Ga0316578_10218634
313 Ga0307516_10000982
314 Ga0316577_10000504
315 Ga0316577_10000602
316 Ga0316577_10014972
317 Ga0316577_10022214
318 Ga0316577_10097569
319 Ga0316577_10299876
320 Ga0307406_10008664
321 Ga0307416_100419407
322 Ga0307416_101141954
323 Ga0316583_10000132
324 Ga0316583_10012995
325 Ga0316583_10019198
326 Ga0316583_10043039
327 Ga0316585_10000178
328 Ga0316585_10003200
329 Ga0316585_10024326
330 Ga0316585_10063297
331 Ga0316580_10004060
332 Ga0316580_10016505
333 Ga0316580_10049343
334 Ga0316593_10047380
335 Ga0316586_1014535
336 Ga0316596_1004466
337 Ga0316574_0004556
338 Ga0316574_0008819
339 Ga0316574_0018877
340 Ga0316574_0028281
341 Ga0316574_0050883
342 Ga0316574_0080315
343 Ga0316574_0100234
344 Ga0316574_0124042
345 Ga0373935_0062292
346 Ga0316582_0000756
347 Ga0316582_0001092
348 Ga0316582_0002007
349 Ga0316582_0007641
350 Ga0316582_0014109
351 Ga0316582_0020326
352 Ga0316582_0042780
353 Ga0316582_0045033
354 Ga0316582_0067242
355 Ga0316582_0102236
356 Ga0316582_0210217
357 Ga0316582_0226350
358 Ga0316582_0255278
359 Ga0316584_0000387
360 Ga0316584_0000940
361 Ga0316584_0005887
362 Ga0316584_0024845
363 Ga0316584_0055091
364 Ga0316584_0067997
365 Ga0316584_0145255
366 Ga0316584_0290196
367 Ga0316584_0325176
368 Ga0316584_0394902
369 Ga0395900_0034550
370 Ga0395900_0052303
371 Ga0316581_0005127
372 Ga0316581_0005656
373 Ga0316581_0055104
374 Ga0436364_0837043
375 Ga0395901_0162009
376 Ga0436365_1555877
377 Ga0451853_0153518
378 Ga0466970_0002686
379 Ga0466970_0010769
380 Ga0466957_0041696
381 Ga0466959_0177220
382 Ga0466958_0141494
383 Ga0466958_0440810
384 Ga0466967_0176000
385 Ga0495592_0024926
386 Ga0495592_0202513
387 Ga0495603_0036517
388 Ga0495651_0077849
389 Ga0495628_0001716
390 Ga0495628_0002484
391 Ga0495628_0079686
392 Ga0495652_0003469
393 Ga0495587_0032671
394 Ga0495645_0026274
395 Ga0495667_0002873
396 Ga0495600_0043153
397 Ga0495600_0168565
398 Ga0495684_0011695
399 Ga0501034_0131530
400 Ga0501047_0008540
401 Ga0501074_0200614
402 nmdc:mga06r32_334428_c1
403 nmdc:mga08y16_28864_c1
404 nmdc:mga08y16_629480_c1
405 nmdc:mga0n895_282108_c1
406 nmdc:mga0n895_376725_c1
407 nmdc:mga0rr50_318605_c1
408 nmdc:mga08x19_216808_c1
409 Ga0495601_0214636
410 Ga0500583_0031599
411 Ga0500651_0099119
412 Ga0500641_0004494
413 Ga0500594_0001493
414 Ga0500652_022085
415 Ga0500559_0218425
416 2772644472
417 2855674640
418 2855678349
419 2857294788
420 2858854983
421 2858889231
422 2858900439
423 2861524934
424 2869049361
425 2869067162
426 2869073672
427 2880492306
428 2880499979
429 2910246761
430 2912764315
431 2929228540
432 2995464126
433 8003875254
434 8025533910
435 8047715499
436 8054707411
437 8054732277
438 8054738398

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13237

Fer4_10

4Fe-4S dicluster domain

167

240

0.95

PF13085

Fer2_3

2Fe-2S iron-sulfur cluster binding domain

19

137

0.94

PF12797

Fer4_2

4Fe-4S binding domain

165

186

0.91

PF00037

Fer4

4Fe-4S binding domain

168

188

0.9

PF12838

Fer4_7

4Fe-4S dicluster domain

173

243

0.61

PF13183

Fer4_8

4Fe-4S dicluster domain

170

243

0.61

Structural Annotation

Top 5 Hits

ID Description Score Start End
7kcm-assembly1.cif.gz_C full-length human mitochondrial hsp90 (trap1) in complex with sdhb in the presence of amp-pnp 0.6185 2 86
8coi-assembly8.cif.gz_H human adenovirus-derived synthetic addobody binder 0.4849 14 47
8qb3-assembly1.cif.gz_D addobody zinc containing condition 0.4386 2 47
7kcm-assembly1.cif.gz_C full-length human mitochondrial hsp90 (trap1) in complex with sdhb in the presence of amp-pnp 0.4346 2 86
6lum-assembly1.cif.gz_Q structure of mycobacterium smegmatis succinate dehydrogenase 2 0.3998 3 237
ID Description Score Start End Superfamily
af_Q2FZC7_12_128_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.729 2 115 3.10.20.30
af_O53371_19_134_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.6804 1 115 3.10.20.30
af_Q2FZC7_12_128_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.6694 2 115 3.10.20.30
af_O53371_19_134_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.6601 1 115 3.10.20.30
1fumB02 Mainly Alpha;Orthogonal Bundle;Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2;Alpha-helical ferredoxin 0.5173 117 243 1.10.1060.10
ID Description Score Start End GO Terms
AF-A0A7V5RN34-F1-model_v4 Succinate dehydrogenase/fumarate reductase iron-sulfur subunit 0.9475 1 57
AF-A0A7V5RN34-F1-model_v4 Succinate dehydrogenase/fumarate reductase iron-sulfur subunit 0.9317 1 57
AF-A0A6B3ETT5-F1-model_v4 Succinate dehydrogenase/fumarate reductase iron-sulfur subunit 0.9279 171 244 GO:0051536
AF-X1CZ28-F1-model_v4 4Fe-4S ferredoxin-type domain-containing protein 0.9106 171 241 GO:0051536
AF-A0A354M2H1-F1-model_v4 Succinate dehydrogenase/fumarate reductase iron-sulfur subunit 0.9072 171 242 GO:0051536

Map