F330424

General Info

Members Datasets Scaffolds Average Seq Length
218 131 215 344

Family's Representative Sequence

Representative Sequence 3300049572|Ga0501036_0065581|Ga0501036_0065581_773_1915
Length 380
Sequence MTQEAAAKRPGKVVEETMIDISRPRPWRGLVVLLGTVVILAVGAAASRAADAGDFYKGKTIDLIISTGPGGGLDHNARIVARHLANHIPGKPTIVAKNMPGAGHLRAANFLHTQAAKDGTVIGTVIPGFLMSQVLEGTGVKFDASKFNWLGSTSYSTQTVYVWKTSKVGSVEEARKREVLMGATGAGSYAALYPTVMNNVLGTRFRIIAGYKSSAEVNLAMERGEVEGRAGNNWNSLKAENGEWLKNGSVRLITQIGLERDPEIGDVPLLLDLAKTAEDRDLLRFFSADIVLGRPFLAPPVVPDEIVAVLRKAFADMMADPAFLKESADSGLDVKPVDGAAVQKVVEEIVNAPADIVARAKLAITPKDVVGGAKAEGQTR

Samples

Sample ID Description Type Environment
1 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
2 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
7 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
30 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
31 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
32 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
41 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
42 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
43 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
44 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
45 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
46 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
47 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
48 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
49 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
50 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
51 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
52 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
53 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
54 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
55 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
56 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
57 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
58 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
59 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
60 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
65 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
66 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
67 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
68 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
69 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
70 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
71 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
72 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
73 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
76 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
77 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
78 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
79 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
80 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
81 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
84 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
85 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
86 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
87 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
90 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
91 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
92 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
93 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
94 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
95 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
96 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
111 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
112 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
115 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
116 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
117 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
118 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
121 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
122 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
125 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
126 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
127 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
128 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
129 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
130 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
131 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.75
Nodule 0
Rhizoplane 5.5
Rhizosphere 91.74
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070675_100079694 3300005354 Bacteria 2729
2 Ga0070675_100311211 3300005354 Unclassified 1390
3 Ga0070673_100198359 3300005364 Bacteria 1727
4 Ga0070714_100000326 3300005435 Bacteria 35936
5 Ga0070714_100004210 3300005435 Bacteria 10837
6 Ga0070714_100004292 3300005435 Bacteria 10742
7 Ga0070714_100031472 3300005435 Bacteria 4427
8 Ga0070714_100033562 3300005435 Bacteria 4291
9 Ga0070714_100044249 3300005435 Bacteria 3768
10 Ga0070711_100106535 3300005439 Bacteria 2050
11 Ga0070705_100126472 3300005440 Bacteria 1660
12 Ga0070700_100077607 3300005441 Bacteria 2136
13 Ga0070694_100190000 3300005444 Bacteria 1524
14 Ga0070681_10011537 3300005458 Bacteria 8747
15 Ga0070681_10486960 3300005458 Unclassified 1146
16 Ga0070679_100097115 3300005530 Bacteria 2934
17 Ga0070679_100104169 3300005530 Bacteria 2824
18 Ga0070695_100111833 3300005545 Bacteria 1855
19 Ga0070704_100227486 3300005549 Unclassified 1520
20 Ga0070702_100169917 3300005615 Unclassified 1417
21 Ga0068863_100108319 3300005841 Bacteria 2644
22 Ga0068863_100142548 3300005841 Archaea 2291
23 Ga0081455_10002823 3300005937 Bacteria 20458
24 Ga0081455_10006884 3300005937 Bacteria 12103
25 Ga0081455_10007985 3300005937 Bacteria 11065
26 Ga0081455_10069946 3300005937 Bacteria 2916
27 Ga0081540_1015202 3300005983 Bacteria 4883
28 Ga0081540_1024622 3300005983 Bacteria 3488
29 Ga0081540_1043727 3300005983 Bacteria 2294
30 Ga0070717_10260511 3300006028 Bacteria 1534
31 Ga0075365_10044185 3300006038 Bacteria 2918
32 Ga0075365_10089729 3300006038 Bacteria 2093
33 Ga0068871_100351231 3300006358 Unclassified 1304
34 Ga0075430_100000001 3300006846 Bacteria 185803
35 Ga0075430_100000823 3300006846 Bacteria 24231
36 Ga0075430_100077157 3300006846 Bacteria 2793
37 Ga0075431_100098249 3300006847 Unclassified 3023
38 Ga0075431_100120024 3300006847 Bacteria 2713
39 Ga0075431_100278699 3300006847 Bacteria 1693
40 Ga0075434_100010620 3300006871 Bacteria 8639
41 Ga0075434_100049995 3300006871 Unclassified 4153
42 Ga0075434_100272282 3300006871 Bacteria 1712
43 Ga0075434_100364281 3300006871 Bacteria 1466
44 Ga0075436_100245281 3300006914 Bacteria 1275
45 Ga0075435_100321656 3300007076 Bacteria 1324
46 Ga0099795_10000491 3300007788 Bacteria 7412
47 Ga0099795_10004034 3300007788 Bacteria 3734
48 Ga0099795_10046252 3300007788 Bacteria 1567
49 Ga0111539_10044580 3300009094 Bacteria 5313
50 Ga0111539_10080260 3300009094 Bacteria 3838
51 Ga0111539_10302094 3300009094 Unclassified 1863
52 Ga0114129_10000570 3300009147 Bacteria 45373
53 Ga0114129_10001559 3300009147 Bacteria 31121
54 Ga0114129_10007364 3300009147 Bacteria 15667
55 Ga0114129_10013624 3300009147 Bacteria 11586
56 Ga0114129_10281392 3300009147 Bacteria 2222
57 Ga0105248_10440013 3300009177 Unclassified 1469
58 Ga0105249_10174606 3300009553 Bacteria 2086
59 Ga0099796_10006666 3300010159 Bacteria 2971
60 Ga0099796_10062598 3300010159 Bacteria 1323
61 Ga0157380_10225950 3300014326 Bacteria 1678
62 Ga0157376_10111516 3300014969 Unclassified 2408
63 Ga0157376_10189798 3300014969 Bacteria 1884
64 Ga0207699_10087383 3300025906 Bacteria 1949
65 Ga0207707_10035442 3300025912 Bacteria 4364
66 Ga0207693_10085436 3300025915 Bacteria 2472
67 Ga0207693_10209559 3300025915 Bacteria 1532
68 Ga0207652_10111800 3300025921 Bacteria 2423
69 Ga0207664_10004917 3300025929 Bacteria 9082
70 Ga0207664_10048217 3300025929 Bacteria 3349
71 Ga0207665_10053534 3300025939 Bacteria 2721
72 Ga0207708_10292378 3300026075 Archaea 1323
73 Ga0209179_1001438 3300027512 Bacteria 2915
74 Ga0209179_1001534 3300027512 Bacteria 2857
75 Ga0209179_1002342 3300027512 Bacteria 2543
76 Ga0207428_10195030 3300027907 Unclassified 1525
77 Ga0373934_0049018 3300035086 Unclassified 1672
78 Ga0373923_0000913 3300035111 Bacteria 7879
79 Ga0373932_0048904 3300035112 Bacteria 1248
80 Ga0373936_0026864 3300035113 Bacteria 2256
81 Ga0373936_0032063 3300035113 Bacteria 2077
82 Ga0373939_0048817 3300035114 Bacteria 1306
83 Ga0373945_0005604 3300035116 Bacteria 4026
84 Ga0373953_0001857 3300035117 Bacteria 6255
85 Ga0373954_0032166 3300035118 Bacteria 2424
86 Ga0373960_0017765 3300035121 Bacteria 1847
87 Ga0373960_0077604 3300035121 Unclassified 1039
88 Ga0373943_0000306 3300035170 Bacteria 20449
89 Ga0373955_0000039 3300035172 Bacteria 51994
90 Ga0373924_0001714 3300035410 Bacteria 7240
91 Ga0373931_0003860 3300035691 Bacteria 6777
92 Ga0373931_0018265 3300035691 Bacteria 3485
93 Ga0373931_0022831 3300035691 Bacteria 3152
94 Ga0373935_0000079 3300035692 Bacteria 41989
95 Ga0373935_0035213 3300035692 Bacteria 3125
96 Ga0373935_0077613 3300035692 Bacteria 2153
97 Ga0373927_0007807 3300035695 Bacteria 7239
98 Ga0373927_0044859 3300035695 Bacteria 2860
99 Ga0373933_0003164 3300035724 Bacteria 9196
100 Ga0373947_0007865 3300035725 Bacteria 6157
101 Ga0373937_0000223 3300036401 Bacteria 54957
102 Ga0373937_0001937 3300036401 Bacteria 17319
103 Ga0373937_0006604 3300036401 Bacteria 10017
104 Ga0373937_0010003 3300036401 Bacteria 8272
105 Ga0373925_0000002 3300037068 Bacteria 368879
106 Ga0373925_0015715 3300037068 Bacteria 5478
107 Ga0373925_0248237 3300037068 Unclassified 1427
108 Ga0395899_0010887 3300037312 Bacteria 6970
109 Ga0395899_0032992 3300037312 Bacteria 3890
110 Ga0395900_0001112 3300037418 Bacteria 34108
111 Ga0395900_0002172 3300037418 Bacteria 21927
112 Ga0395900_0471949 3300037418 Unclassified 1208
113 Ga0395898_0006538 3300037466 Bacteria 12439
114 Ga0395898_0017132 3300037466 Bacteria 7400
115 Ga0395898_0023100 3300037466 Bacteria 6288
116 Ga0395898_0058197 3300037466 Unclassified 3763
117 Ga0395901_0001710 3300038443 Bacteria 22668
118 Ga0395901_0004427 3300038443 Bacteria 14167
119 Ga0395901_0043451 3300038443 Bacteria 4661
120 Ga0395901_0196233 3300038443 Unclassified 2116
121 Ga0495592_0000475 3300046454 Bacteria 29441
122 Ga0495592_0134118 3300046454 Bacteria 1729
123 Ga0495603_0206803 3300046455 Bacteria 1134
124 Ga0495629_0057498 3300046459 Bacteria 2720
125 Ga0495629_0138388 3300046459 Bacteria 1695
126 Ga0495638_0050327 3300046460 Bacteria 2602
127 Ga0495651_0002458 3300046462 Bacteria 14320
128 Ga0495653_0000006 3300046463 Bacteria 363285
129 Ga0495662_0005976 3300046476 Bacteria 6085
130 Ga0495664_0000002 3300046477 Bacteria 625183
131 Ga0495608_0000009 3300046511 Bacteria 266614
132 Ga0495618_0000005 3300046514 Bacteria 230421
133 Ga0495628_0000002 3300046516 Bacteria 589399
134 Ga0495652_0000004 3300046529 Bacteria 588877
135 Ga0495665_0120326 3300046531 Bacteria 1375
136 Ga0495640_0000005 3300046533 Bacteria 318271
137 Ga0495587_0000007 3300046536 Bacteria 290788
138 Ga0495645_0000003 3300046543 Bacteria 570133
139 Ga0495667_0000002 3300046559 Bacteria 437535
140 Ga0495634_0000129 3300046642 Bacteria 65082
141 Ga0495635_0000020 3300046663 Bacteria 189698
142 Ga0495657_0001085 3300046675 Bacteria 23868
143 Ga0495599_0000001 3300046678 Bacteria 537563
144 Ga0495623_0000001 3300046679 Bacteria 313861
145 Ga0495646_0000013 3300046680 Bacteria 159700
146 Ga0495658_0201626 3300046683 Bacteria 1240
147 Ga0495613_0036602 3300046689 Bacteria 3640
148 Ga0495624_0185064 3300046690 Bacteria 1268
149 Ga0495604_0000005 3300047317 Bacteria 424516
150 Ga0495674_0000003 3300047319 Bacteria 562126
151 Ga0495680_0000002 3300047322 Bacteria 197533
152 Ga0495675_0000383 3300047444 Bacteria 30552
153 Ga0495684_0000020 3300047471 Bacteria 148507
154 Ga0495602_0000027 3300048088 Bacteria 145010
155 Ga0495602_0208807 3300048088 Bacteria 1484
156 Ga0496101_0078398 3300048904 Bacteria 2437
157 Ga0496101_0225052 3300048904 Bacteria 1457
158 Ga0496101_0285829 3300048904 Unclassified 1290
159 Ga0496104_0312589 3300048907 Bacteria 1484
160 Ga0496105_0364152 3300048908 Bacteria 1153
161 Ga0496106_0075970 3300048909 Bacteria 2574
162 Ga0496106_0122134 3300048909 Unclassified 2037
163 Ga0496108_0260214 3300048911 Bacteria 1510
164 Ga0496109_0321747 3300048912 Bacteria 1460
165 Ga0496113_0306303 3300048916 Unclassified 1272
166 Ga0496114_0146493 3300048917 Bacteria 2047
167 Ga0496115_0316449 3300048918 Bacteria 1277
168 Ga0501034_0248624 3300049571 Bacteria 1723
169 Ga0501034_0268217 3300049571 Unclassified 1649
170 Ga0501034_0513614 3300049571 Unclassified 1111
171 Ga0501036_0065581 3300049572 Bacteria 3073
172 Ga0501039_0264258 3300049575 Unclassified 1352
173 Ga0501047_0094658 3300049581 Bacteria 2866
174 Ga0501047_0128162 3300049581 Bacteria 2418
175 Ga0501047_0246992 3300049581 Unclassified 1634
176 Ga0501047_0373972 3300049581 Unclassified 1260
177 Ga0501048_0042173 3300049582 Bacteria 3268
178 Ga0501070_0177207 3300049586 Bacteria 1755
179 Ga0501076_0037696 3300049592 Bacteria 3793
180 Ga0501076_0404357 3300049592 Bacteria 1123
181 Ga0501077_0104838 3300049593 Bacteria 1792
182 Ga0501044_0120048 3300049823 Bacteria 2631
183 Ga0501044_0391746 3300049823 Unclassified 1303
184 Ga0501045_0059549 3300049824 Unclassified 2798
185 nmdc:mga00v17_18856_c1 3300050491 Bacteria 3927
186 nmdc:mga0yw44_26637_c1 3300050492 Bacteria 3305
187 nmdc:mga05p37_1409_c1 3300050507 Bacteria 27980
188 nmdc:mga05p37_1895_c1 3300050507 Bacteria 24373
189 nmdc:mga05p37_8086_c1 3300050507 Bacteria 5267
190 nmdc:mga05p37_82333_c1 3300050507 Bacteria 3965
191 nmdc:mga0qj67_35_c1 3300050509 Bacteria 93990
192 nmdc:mga0qj67_47_c1 3300050509 Bacteria 86979
193 nmdc:mga0qj67_77106_c1 3300050509 Bacteria 2666
194 nmdc:mga06r32_245877_c1 3300050510 Bacteria 1336
195 nmdc:mga06r32_269880_c1 3300050510 Unclassified 1689
196 nmdc:mga06r32_428012_c1 3300050510 Bacteria 1304
197 nmdc:mga06r32_636791_c1 3300050510 Unclassified 1035
198 nmdc:mga0n895_100443_c1 3300050512 Bacteria 2902
199 nmdc:mga0n895_367847_c1 3300050512 Bacteria 1456
200 nmdc:mga0n895_37453_c1 3300050512 Unclassified 4692
201 nmdc:mga0n895_40408_c1 3300050512 Bacteria 4530
202 nmdc:mga0n895_7148_c1 3300050512 Bacteria 9549
203 nmdc:mga0rr50_41502_c1 3300050513 Bacteria 3353
204 nmdc:mga08x19_101852_c1 3300050514 Bacteria 1906
205 nmdc:mga0a205_203204_c1 3300050515 Unclassified 1871
206 Ga0495601_0000010 3300053077 Bacteria 266222
207 Ga0495612_0000002 3300053078 Bacteria 310466
208 Ga0495595_0000110 3300053084 Bacteria 37533
209 Ga0495619_0000002 3300053085 Bacteria 530226
210 Ga0495619_0057405 3300053085 Bacteria 2583
211 Ga0500643_027292 3300053087 Bacteria 1776
212 Ga0500562_037435 3300053108 Bacteria 1288
213 Ga0501084_0131126 3300054114 Bacteria 2110
214 Ga0501082_0038746 3300060353 Unclassified 4111
215 Ga0501082_0238526 3300060353 Unclassified 1582

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048908 Ga0496105_0364152 Ga0496105_0364152_24_818 257
2 3300048904 Ga0496101_0285829 Ga0496101_0285829_48_869 266
3 3300049581 Ga0501047_0373972 Ga0501047_0373972_29_889 282
4 3300005444 Ga0070694_100190000 Ga0070694_1001900002 285
5 3300050510 nmdc:mga06r32_636791_c1 nmdc:mga06r32_636791_c1_27_899 286
6 3300026075 Ga0207708_10292378 Ga0207708_102923781 303
7 3300006038 Ga0075365_10089729 Ga0075365_100897292 314
8 3300048912 Ga0496109_0321747 Ga0496109_0321747_350_1324 314
9 3300009094 Ga0111539_10080260 Ga0111539_100802602 315
10 3300050512 nmdc:mga0n895_7148_c1 nmdc:mga0n895_7148_c1_6930_7889 315
11 3300050515 nmdc:mga0a205_203204_c1 nmdc:mga0a205_203204_c1_846_1805 315
12 3300046531 Ga0495665_0120326 Ga0495665_0120326_345_1334 316
13 3300009147 Ga0114129_10000570 Ga0114129_1000057021 319
14 3300050507 nmdc:mga05p37_1409_c1 nmdc:mga05p37_1409_c1_24239_25210 319
15 3300035121 Ga0373960_0017765 Ga0373960_0017765_31_1014 320
16 3300009094 Ga0111539_10044580 Ga0111539_100445803 321
17 3300005937 Ga0081455_10006884 Ga0081455_100068845 322
18 3300009147 Ga0114129_10001559 Ga0114129_1000155914 323
19 3300014969 Ga0157376_10189798 Ga0157376_101897982 323
20 3300035112 Ga0373932_0048904 Ga0373932_0048904_90_1082 323
21 3300035691 Ga0373931_0022831 Ga0373931_0022831_2097_3089 323
22 3300048904 Ga0496101_0225052 Ga0496101_0225052_165_1157 323
23 3300048907 Ga0496104_0312589 Ga0496104_0312589_293_1285 323
24 3300048918 Ga0496115_0316449 Ga0496115_0316449_186_1178 323
25 3300049581 Ga0501047_0128162 Ga0501047_0128162_1006_2034 323
26 3300050507 nmdc:mga05p37_1895_c1 nmdc:mga05p37_1895_c1_11977_13011 323
27 3300037068 Ga0373925_0015715 Ga0373925_0015715_971_2038 324
28 3300046689 Ga0495613_0036602 Ga0495613_0036602_52_1119 324
29 3300005458 Ga0070681_10011537 Ga0070681_100115376 325
30 3300005530 Ga0070679_100097115 Ga0070679_1000971151 325
31 3300005841 Ga0068863_100142548 Ga0068863_1001425481 325
32 3300025912 Ga0207707_10035442 Ga0207707_100354423 325
33 3300005937 Ga0081455_10069946 Ga0081455_100699462 326
34 3300007788 Ga0099795_10046252 Ga0099795_100462521 326
35 3300010159 Ga0099796_10006666 Ga0099796_100066661 326
36 3300035691 Ga0373931_0018265 Ga0373931_0018265_2381_3451 326
37 3300037466 Ga0395898_0058197 Ga0395898_0058197_1963_2985 326
38 3300038443 Ga0395901_0196233 Ga0395901_0196233_197_1219 326
39 3300049581 Ga0501047_0094658 Ga0501047_0094658_1550_2566 326
40 3300005435 Ga0070714_100031472 Ga0070714_1000314723 327
41 3300005983 Ga0081540_1015202 Ga0081540_10152024 327
42 3300025929 Ga0207664_10004917 Ga0207664_100049177 327
43 3300035695 Ga0373927_0044859 Ga0373927_0044859_1846_2850 327
44 3300049571 Ga0501034_0513614 Ga0501034_0513614_73_1101 327
45 3300046683 Ga0495658_0201626 Ga0495658_0201626_32_1030 328
46 3300005354 Ga0070675_100311211 Ga0070675_1003112112 329
47 3300005435 Ga0070714_100004210 Ga0070714_1000042106 329
48 3300005983 Ga0081540_1024622 Ga0081540_10246222 329
49 3300006914 Ga0075436_100245281 Ga0075436_1002452811 329
50 3300027512 Ga0209179_1002342 Ga0209179_10023421 329
51 3300005435 Ga0070714_100033562 Ga0070714_1000335624 330
52 3300005439 Ga0070711_100106535 Ga0070711_1001065353 330
53 3300005545 Ga0070695_100111833 Ga0070695_1001118332 330
54 3300005615 Ga0070702_100169917 Ga0070702_1001699172 330
55 3300005841 Ga0068863_100108319 Ga0068863_1001083192 330
56 3300006358 Ga0068871_100351231 Ga0068871_1003512311 330
57 3300006847 Ga0075431_100278699 Ga0075431_1002786992 330
58 3300006871 Ga0075434_100272282 Ga0075434_1002722821 330
59 3300010159 Ga0099796_10062598 Ga0099796_100625981 330
60 3300014969 Ga0157376_10111516 Ga0157376_101115162 330
61 3300025906 Ga0207699_10087383 Ga0207699_100873831 330
62 3300025915 Ga0207693_10209559 Ga0207693_102095591 330
63 3300025929 Ga0207664_10004917 Ga0207664_100049174 330
64 3300025939 Ga0207665_10053534 Ga0207665_100535343 330
65 3300035086 Ga0373934_0049018 Ga0373934_0049018_613_1662 330
66 3300035111 Ga0373923_0000913 Ga0373923_0000913_5794_6834 330
67 3300035113 Ga0373936_0026864 Ga0373936_0026864_475_1515 330
68 3300035113 Ga0373936_0032063 Ga0373936_0032063_536_1567 330
69 3300035114 Ga0373939_0048817 Ga0373939_0048817_65_1084 330
70 3300035116 Ga0373945_0005604 Ga0373945_0005604_1929_2969 330
71 3300035117 Ga0373953_0001857 Ga0373953_0001857_4727_5767 330
72 3300035118 Ga0373954_0032166 Ga0373954_0032166_445_1485 330
73 3300035121 Ga0373960_0077604 Ga0373960_0077604_10_1029 330
74 3300035170 Ga0373943_0000306 Ga0373943_0000306_3695_4735 330
75 3300035172 Ga0373955_0000039 Ga0373955_0000039_34410_35450 330
76 3300035410 Ga0373924_0001714 Ga0373924_0001714_2610_3650 330
77 3300035691 Ga0373931_0003860 Ga0373931_0003860_2652_3671 330
78 3300035692 Ga0373935_0000079 Ga0373935_0000079_15481_16521 330
79 3300035692 Ga0373935_0077613 Ga0373935_0077613_564_1613 330
80 3300035695 Ga0373927_0007807 Ga0373927_0007807_4431_5471 330
81 3300035724 Ga0373933_0003164 Ga0373933_0003164_7165_8205 330
82 3300035725 Ga0373947_0007865 Ga0373947_0007865_4477_5517 330
83 3300036401 Ga0373937_0000223 Ga0373937_0000223_27940_28980 330
84 3300036401 Ga0373937_0006604 Ga0373937_0006604_8199_9248 330
85 3300037068 Ga0373925_0000002 Ga0373925_0000002_358351_359391 330
86 3300037068 Ga0373925_0248237 Ga0373925_0248237_295_1344 330
87 3300046454 Ga0495592_0000475 Ga0495592_0000475_3559_4599 330
88 3300046454 Ga0495592_0134118 Ga0495592_0134118_505_1554 330
89 3300046459 Ga0495629_0057498 Ga0495629_0057498_1203_2243 330
90 3300046459 Ga0495629_0138388 Ga0495629_0138388_417_1457 330
91 3300046460 Ga0495638_0050327 Ga0495638_0050327_11_1084 330
92 3300046462 Ga0495651_0002458 Ga0495651_0002458_13205_14245 330
93 3300046463 Ga0495653_0000006 Ga0495653_0000006_358499_359539 330
94 3300046476 Ga0495662_0005976 Ga0495662_0005976_2052_3092 330
95 3300046477 Ga0495664_0000002 Ga0495664_0000002_394133_395173 330
96 3300046511 Ga0495608_0000009 Ga0495608_0000009_85262_86302 330
97 3300046514 Ga0495618_0000005 Ga0495618_0000005_171492_172532 330
98 3300046516 Ga0495628_0000002 Ga0495628_0000002_358518_359558 330
99 3300046529 Ga0495652_0000004 Ga0495652_0000004_229325_230365 330
100 3300046533 Ga0495640_0000005 Ga0495640_0000005_85277_86317 330
101 3300046536 Ga0495587_0000007 Ga0495587_0000007_231925_232965 330
102 3300046543 Ga0495645_0000003 Ga0495645_0000003_339769_340809 330
103 3300046559 Ga0495667_0000002 Ga0495667_0000002_78165_79205 330
104 3300046642 Ga0495634_0000129 Ga0495634_0000129_24785_25825 330
105 3300046663 Ga0495635_0000020 Ga0495635_0000020_167891_168931 330
106 3300046675 Ga0495657_0001085 Ga0495657_0001085_9890_10930 330
107 3300046678 Ga0495599_0000001 Ga0495599_0000001_497196_498236 330
108 3300046679 Ga0495623_0000001 Ga0495623_0000001_266141_267181 330
109 3300046680 Ga0495646_0000013 Ga0495646_0000013_116774_117814 330
110 3300046690 Ga0495624_0185064 Ga0495624_0185064_33_1073 330
111 3300047317 Ga0495604_0000005 Ga0495604_0000005_384162_385202 330
112 3300047319 Ga0495674_0000003 Ga0495674_0000003_202568_203608 330
113 3300047322 Ga0495680_0000002 Ga0495680_0000002_161585_162625 330
114 3300047444 Ga0495675_0000383 Ga0495675_0000383_8593_9633 330
115 3300047471 Ga0495684_0000020 Ga0495684_0000020_108178_109218 330
116 3300048088 Ga0495602_0000027 Ga0495602_0000027_86078_87118 330
117 3300048088 Ga0495602_0208807 Ga0495602_0208807_270_1310 330
118 3300048909 Ga0496106_0075970 Ga0496106_0075970_244_1263 330
119 3300048909 Ga0496106_0122134 Ga0496106_0122134_785_1831 330
120 3300048911 Ga0496108_0260214 Ga0496108_0260214_334_1353 330
121 3300049593 Ga0501077_0104838 Ga0501077_0104838_603_1610 330
122 3300050510 nmdc:mga06r32_245877_c1 nmdc:mga06r32_245877_c1_203_1222 330
123 3300053077 Ga0495601_0000010 Ga0495601_0000010_229279_230319 330
124 3300053078 Ga0495612_0000002 Ga0495612_0000002_270114_271154 330
125 3300053084 Ga0495595_0000110 Ga0495595_0000110_718_1758 330
126 3300053085 Ga0495619_0000002 Ga0495619_0000002_358521_359561 330
127 3300007076 Ga0075435_100321656 Ga0075435_1003216562 331
128 3300009147 Ga0114129_10013624 Ga0114129_100136243 331
129 3300049824 Ga0501045_0059549 Ga0501045_0059549_1036_2067 331
130 3300050507 nmdc:mga05p37_82333_c1 nmdc:mga05p37_82333_c1_1527_2573 331
131 3300050512 nmdc:mga0n895_37453_c1 nmdc:mga0n895_37453_c1_2897_3952 331
132 3300006038 Ga0075365_10044185 Ga0075365_100441852 332
133 3300006846 Ga0075430_100077157 Ga0075430_1000771575 332
134 3300006871 Ga0075434_100364281 Ga0075434_1003642812 332
135 3300009147 Ga0114129_10007364 Ga0114129_1000736413 332
136 3300037466 Ga0395898_0006538 Ga0395898_0006538_6375_7406 332
137 3300038443 Ga0395901_0001710 Ga0395901_0001710_9041_10072 332
138 3300048916 Ga0496113_0306303 Ga0496113_0306303_59_1084 332
139 3300049586 Ga0501070_0177207 Ga0501070_0177207_33_1091 332
140 3300050491 nmdc:mga00v17_18856_c1 nmdc:mga00v17_18856_c1_1263_2321 332
141 3300050492 nmdc:mga0yw44_26637_c1 nmdc:mga0yw44_26637_c1_1314_2372 332
142 3300050507 nmdc:mga05p37_8086_c1 nmdc:mga05p37_8086_c1_3563_4618 332
143 3300050509 nmdc:mga0qj67_77106_c1 nmdc:mga0qj67_77106_c1_599_1657 332
144 3300050512 nmdc:mga0n895_367847_c1 nmdc:mga0n895_367847_c1_158_1174 332
145 3300005364 Ga0070673_100198359 Ga0070673_1001983591 333
146 3300007788 Ga0099795_10004034 Ga0099795_100040342 333
147 3300009177 Ga0105248_10440013 Ga0105248_104400132 333
148 3300009553 Ga0105249_10174606 Ga0105249_101746061 333
149 3300014326 Ga0157380_10225950 Ga0157380_102259502 333
150 3300027512 Ga0209179_1001534 Ga0209179_10015342 333
151 3300046455 Ga0495603_0206803 Ga0495603_0206803_29_1069 333
152 3300049571 Ga0501034_0248624 Ga0501034_0248624_538_1587 333
153 3300049581 Ga0501047_0246992 Ga0501047_0246992_506_1555 333
154 3300005435 Ga0070714_100004292 Ga0070714_1000042927 334
155 3300005458 Ga0070681_10486960 Ga0070681_104869601 334
156 3300006028 Ga0070717_10260511 Ga0070717_102605111 334
157 3300006847 Ga0075431_100098249 Ga0075431_1000982493 334
158 3300006871 Ga0075434_100049995 Ga0075434_1000499952 334
159 3300009094 Ga0111539_10302094 Ga0111539_103020941 334
160 3300027907 Ga0207428_10195030 Ga0207428_101950302 334
161 3300035692 Ga0373935_0035213 Ga0373935_0035213_1870_2904 334
162 3300036401 Ga0373937_0001937 Ga0373937_0001937_1297_2328 334
163 3300037312 Ga0395899_0032992 Ga0395899_0032992_1742_2830 334
164 3300037466 Ga0395898_0017132 Ga0395898_0017132_2130_3218 334
165 3300048904 Ga0496101_0078398 Ga0496101_0078398_975_2000 334
166 3300049592 Ga0501076_0404357 Ga0501076_0404357_23_1045 334
167 3300050510 nmdc:mga06r32_269880_c1 nmdc:mga06r32_269880_c1_547_1620 334
168 3300050514 nmdc:mga08x19_101852_c1 nmdc:mga08x19_101852_c1_749_1825 334
169 3300005435 Ga0070714_100000326 Ga0070714_10000032618 335
170 3300005440 Ga0070705_100126472 Ga0070705_1001264722 335
171 3300005937 Ga0081455_10007985 Ga0081455_100079854 335
172 3300006847 Ga0075431_100120024 Ga0075431_1001200242 335
173 3300006871 Ga0075434_100010620 Ga0075434_1000106203 335
174 3300025915 Ga0207693_10085436 Ga0207693_100854363 335
175 3300025929 Ga0207664_10048217 Ga0207664_100482171 335
176 3300036401 Ga0373937_0010003 Ga0373937_0010003_7015_8082 335
177 3300037312 Ga0395899_0010887 Ga0395899_0010887_2840_3880 335
178 3300037418 Ga0395900_0001112 Ga0395900_0001112_15344_16396 335
179 3300037418 Ga0395900_0002172 Ga0395900_0002172_621_1661 335
180 3300037418 Ga0395900_0471949 Ga0395900_0471949_148_1188 335
181 3300037466 Ga0395898_0023100 Ga0395898_0023100_4129_5181 335
182 3300038443 Ga0395901_0004427 Ga0395901_0004427_4160_5200 335
183 3300038443 Ga0395901_0043451 Ga0395901_0043451_2522_3574 335
184 3300049571 Ga0501034_0268217 Ga0501034_0268217_524_1603 335
185 3300049823 Ga0501044_0391746 Ga0501044_0391746_149_1228 335
186 3300050510 nmdc:mga06r32_428012_c1 nmdc:mga06r32_428012_c1_146_1177 335
187 3300050512 nmdc:mga0n895_100443_c1 nmdc:mga0n895_100443_c1_334_1362 335
188 3300050512 nmdc:mga0n895_40408_c1 nmdc:mga0n895_40408_c1_701_1783 335
189 3300050513 nmdc:mga0rr50_41502_c1 nmdc:mga0rr50_41502_c1_270_1352 335
190 3300053085 Ga0495619_0057405 Ga0495619_0057405_1174_2388 335
191 3300053108 Ga0500562_037435 Ga0500562_037435_131_1156 335
192 3300005441 Ga0070700_100077607 Ga0070700_1000776072 336
193 3300005530 Ga0070679_100104169 Ga0070679_1001041693 336
194 3300005549 Ga0070704_100227486 Ga0070704_1002274861 336
195 3300005937 Ga0081455_10002823 Ga0081455_1000282318 336
196 3300005983 Ga0081540_1043727 Ga0081540_10437272 336
197 3300007788 Ga0099795_10000491 Ga0099795_100004916 336
198 3300025921 Ga0207652_10111800 Ga0207652_101118002 336
199 3300027512 Ga0209179_1001438 Ga0209179_10014382 336
200 3300006846 Ga0075430_100000823 Ga0075430_10000082314 337
201 3300049823 Ga0501044_0120048 Ga0501044_0120048_1507_2556 337
202 3300050509 nmdc:mga0qj67_35_c1 nmdc:mga0qj67_35_c1_22421_23494 337
203 3300053087 Ga0500643_027292 Ga0500643_027292_542_1633 338
204 3300037466 Ga0395898_0006538 Ga0395898_0006538_8925_10010 339
205 3300038443 Ga0395901_0001710 Ga0395901_0001710_6437_7522 339
206 3300048917 Ga0496114_0146493 Ga0496114_0146493_584_1624 339
207 3300049572 Ga0501036_0065581 Ga0501036_0065581_773_1915 339
208 3300049582 Ga0501048_0042173 Ga0501048_0042173_2063_3205 339
209 3300049592 Ga0501076_0037696 Ga0501076_0037696_1946_3088 339
210 3300054114 Ga0501084_0131126 Ga0501084_0131126_271_1413 339
211 3300060353 Ga0501082_0238526 Ga0501082_0238526_67_1209 339
212 3300005354 Ga0070675_100079694 Ga0070675_1000796943 340
213 3300005435 Ga0070714_100044249 Ga0070714_1000442493 340
214 3300006846 Ga0075430_100000001 Ga0075430_1000000012 340
215 3300009147 Ga0114129_10281392 Ga0114129_102813921 340
216 3300049575 Ga0501039_0264258 Ga0501039_0264258_137_1195 340
217 3300050509 nmdc:mga0qj67_47_c1 nmdc:mga0qj67_47_c1_1255_2277 340
218 3300060353 Ga0501082_0038746 Ga0501082_0038746_1025_2083 340

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

76

362

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4x9t-assembly1.cif.gz_A crystal structure of a tctc solute binding protein from polaromonas (bpro_3516, target efi-510338), no ligand 0.8376 28 334
4x9t-assembly1.cif.gz_A crystal structure of a tctc solute binding protein from polaromonas (bpro_3516, target efi-510338), no ligand 0.8243 28 334
8hk9-assembly2.cif.gz_A apo-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis 0.7955 31 334
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.7821 31 333
8hk9-assembly2.cif.gz_A apo-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis 0.7805 31 334
ID Description Score Start End Superfamily
4x9tA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.8279 28 320 3.40.190.150
2qpqC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.798 130 242 3.40.190.10
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7918 130 242 3.40.190.10
4x9tA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.7769 28 320 3.40.190.150
2f5xC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7603 131 239 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A537MMQ8-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9808 71 336
AF-A0A6L5FFR6-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9782 24 335
AF-A0A2V6B6G5-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9753 27 124
AF-A0A7C9K8W2-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.975 24 335
AF-A0A6N7F6A0-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9736 24 334

Feature Viewer

pLDDT pTM Quality
92.02 0.86 High
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Predicted Structure (AlphaFold2)

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