F329889

General Info

Members Datasets Scaffolds Average Seq Length
218 119 436 230

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10858605|Ga0111539_108586051
Length 249
Sequence MAKRAVAKIAAPAPSNPDPARQAQDAVATLKRLGSRKVLDGYARYAIPSERAFGIRMGAIQAVAKKLGRNHALALALWKTGWYEARMLAVFVAEPDRVTPALMDRWCRDFDNWATTDTACFKLFDRTPHAMKKVSQWSRLRGEFQKRAAFALLASAAAHAKTLSDAEFVRCFPLIQKGADDDRNFVMKGVSWALRAVGHRNPPLHARAVTLARTLAASESRPARWVGKDTLRDLVRPLVVRKMKGRQAS

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
83 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
84 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
87 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
91 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
92 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
93 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
94 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
95 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
96 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
97 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
98 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
99 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
102 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
107 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
108 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
109 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
110 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
111 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
112 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
113 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
114 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
119 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.83
Rhizosphere 94.5
Stem 0
Stem Tuber 0
Unclassified 11.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10858605 3300009094 Unclassified 1056
2 rootL2_10041275 3300003322 Bacteria 9883
3 rootL2_10085473 3300003322 Bacteria 6338
4 Ga0070658_10654013 3300005327 Bacteria 912
5 Ga0070676_10070040 3300005328 Bacteria 2103
6 Ga0070670_100007016 3300005331 Bacteria 9545
7 Ga0070677_10002475 3300005333 Bacteria 5908
8 Ga0070677_10143906 3300005333 Bacteria 1103
9 Ga0068869_100076203 3300005334 Bacteria 2493
10 Ga0070682_100006139 3300005337 Bacteria 6731
11 Ga0070682_100011023 3300005337 Bacteria 5154
12 Ga0070682_100072559 3300005337 Unclassified 2206
13 Ga0070660_100199164 3300005339 Bacteria 1624
14 Ga0070689_100000017 3300005340 Bacteria 158871
15 Ga0070691_10134243 3300005341 Bacteria 1256
16 Ga0070692_10092566 3300005345 Bacteria 1645
17 Ga0070669_100024857 3300005353 Bacteria 4299
18 Ga0070669_100066801 3300005353 Unclassified 2651
19 Ga0070675_100007776 3300005354 Bacteria 8302
20 Ga0070675_100032074 3300005354 Bacteria 4250
21 Ga0070675_100124590 3300005354 Bacteria 2191
22 Ga0070675_100536460 3300005354 Bacteria 1057
23 Ga0070674_100004639 3300005356 Bacteria 7853
24 Ga0070674_100159782 3300005356 Unclassified 1709
25 Ga0070674_100189272 3300005356 Bacteria 1582
26 Ga0070673_100058150 3300005364 Unclassified 3056
27 Ga0070673_100065786 3300005364 Bacteria 2893
28 Ga0070701_10065988 3300005438 Bacteria 1922
29 Ga0070700_100006399 3300005441 Bacteria 6294
30 Ga0070700_100061504 3300005441 Bacteria 2369
31 Ga0070708_100338468 3300005445 Bacteria 1418
32 Ga0070678_100010495 3300005456 Bacteria 5664
33 Ga0070678_100292374 3300005456 Bacteria 1382
34 Ga0068867_100056172 3300005459 Bacteria 2912
35 Ga0068867_100187782 3300005459 Bacteria 1647
36 Ga0068867_100429247 3300005459 Bacteria 1121
37 Ga0070685_10253029 3300005466 Bacteria 1168
38 Ga0070706_100256357 3300005467 Bacteria 1633
39 Ga0068853_100606553 3300005539 Bacteria 1040
40 Ga0070672_100017752 3300005543 Bacteria 5128
41 Ga0070672_100044307 3300005543 Bacteria 3435
42 Ga0070672_100711226 3300005543 Bacteria 880
43 Ga0070686_100050699 3300005544 Bacteria 2639
44 Ga0070686_100147533 3300005544 Bacteria 1644
45 Ga0070693_100012877 3300005547 Bacteria 4246
46 Ga0070693_100429647 3300005547 Bacteria 922
47 Ga0070665_100020296 3300005548 Bacteria 6672
48 Ga0070704_100159980 3300005549 Bacteria 1780
49 Ga0068854_100602582 3300005578 Bacteria 938
50 Ga0068852_100790101 3300005616 Bacteria 963
51 Ga0068859_100086765 3300005617 Bacteria 3177
52 Ga0068859_100332294 3300005617 Bacteria 1614
53 Ga0068864_100050507 3300005618 Bacteria 3580
54 Ga0068864_100051476 3300005618 Bacteria 3548
55 Ga0068864_100114050 3300005618 Bacteria 2409
56 Ga0068861_100000918 3300005719 Bacteria 17869
57 Ga0068861_100007627 3300005719 Bacteria 7425
58 Ga0068861_100017735 3300005719 Bacteria 5059
59 Ga0068861_100045528 3300005719 Bacteria 3304
60 Ga0068861_100076294 3300005719 Bacteria 2612
61 Ga0068870_10009668 3300005840 Bacteria 4396
62 Ga0068870_10026345 3300005840 Bacteria 2898
63 Ga0068870_10165912 3300005840 Bacteria 1314
64 Ga0068863_100070836 3300005841 Bacteria 3298
65 Ga0068863_100074008 3300005841 Bacteria 3222
66 Ga0068863_100171936 3300005841 Bacteria 2078
67 Ga0068858_100444230 3300005842 Bacteria 1249
68 Ga0068860_100007902 3300005843 Bacteria 10618
69 Ga0068860_100274990 3300005843 Bacteria 1644
70 Ga0068862_100017405 3300005844 Bacteria 5987
71 Ga0068862_100075874 3300005844 Bacteria 2909
72 Ga0068871_100207563 3300006358 Bacteria 1693
73 Ga0068865_100010661 3300006881 Bacteria 5729
74 Ga0068865_100044215 3300006881 Bacteria 3048
75 Ga0097620_100086765 3300006931 Bacteria 3177
76 Ga0097620_100332309 3300006931 Bacteria 1614
77 Ga0111539_10276475 3300009094 Bacteria 1954
78 Ga0111539_10776116 3300009094 Unclassified 1115
79 Ga0111539_11064425 3300009094 Bacteria 940
80 Ga0105243_10313401 3300009148 Unclassified 1426
81 Ga0105242_10034092 3300009176 Unclassified 4080
82 Ga0105248_10411000 3300009177 Unclassified 1524
83 Ga0105249_11357349 3300009553 Bacteria 783
84 Ga0157374_10836869 3300013296 Unclassified 937
85 Ga0157375_10008405 3300013308 Bacteria 9040
86 Ga0157375_11391310 3300013308 Unclassified 826
87 Ga0163163_10005171 3300014325 Bacteria 11251
88 Ga0163163_10675153 3300014325 Bacteria 1097
89 Ga0163163_11227870 3300014325 Bacteria 812
90 Ga0157380_10005899 3300014326 Bacteria 8571
91 Ga0157380_10021852 3300014326 Bacteria 4805
92 Ga0157380_10094952 3300014326 Bacteria 2469
93 Ga0157380_10422908 3300014326 Unclassified 1271
94 Ga0157379_10157356 3300014968 Bacteria 2050
95 Ga0157376_10030306 3300014969 Bacteria 4319
96 Ga0163161_10174377 3300017792 Bacteria 1646
97 Ga0163161_10198676 3300017792 Bacteria 1544
98 Ga0207682_10001709 3300025893 Bacteria 10045
99 Ga0207682_10124334 3300025893 Bacteria 1147
100 Ga0207645_10078214 3300025907 Bacteria 2120
101 Ga0207643_10018208 3300025908 Bacteria 3847
102 Ga0207643_10018620 3300025908 Bacteria 3802
103 Ga0207643_10047111 3300025908 Bacteria 2437
104 Ga0207662_10101031 3300025918 Bacteria 1787
105 Ga0207681_10148616 3300025923 Bacteria 1753
106 Ga0207681_10158952 3300025923 Bacteria 1701
107 Ga0207650_10002971 3300025925 Bacteria 11700
108 Ga0207650_10137664 3300025925 Bacteria 1917
109 Ga0207659_10032405 3300025926 Bacteria 3587
110 Ga0207659_10174340 3300025926 Bacteria 1699
111 Ga0207686_10148555 3300025934 Bacteria 1629
112 Ga0207670_10000017 3300025936 Bacteria 158856
113 Ga0207670_10298271 3300025936 Bacteria 1261
114 Ga0207670_10498833 3300025936 Bacteria 988
115 Ga0207669_10079908 3300025937 Bacteria 2089
116 Ga0207669_10271858 3300025937 Bacteria 1273
117 Ga0207704_10047501 3300025938 Bacteria 2566
118 Ga0207691_10004288 3300025940 Bacteria 13856
119 Ga0207691_10006093 3300025940 Bacteria 11655
120 Ga0207691_10016998 3300025940 Bacteria 6904
121 Ga0207691_10078190 3300025940 Bacteria 2978
122 Ga0207691_10317436 3300025940 Bacteria 1336
123 Ga0207711_10089275 3300025941 Unclassified 2707
124 Ga0207689_10015938 3300025942 Bacteria 6363
125 Ga0207651_10069832 3300025960 Unclassified 2482
126 Ga0207651_10195868 3300025960 Bacteria 1615
127 Ga0207651_10245253 3300025960 Bacteria 1462
128 Ga0207651_10427769 3300025960 Bacteria 1132
129 Ga0207668_10614676 3300025972 Bacteria 948
130 Ga0207640_10520668 3300025981 Bacteria 994
131 Ga0207658_10050296 3300025986 Bacteria 3067
132 Ga0207678_10740009 3300026067 Bacteria 867
133 Ga0207708_10018096 3300026075 Bacteria 5302
134 Ga0207708_10089173 3300026075 Bacteria 2377
135 Ga0207708_10132871 3300026075 Bacteria 1947
136 Ga0207702_10072685 3300026078 Bacteria 2965
137 Ga0207641_10053850 3300026088 Bacteria 3413
138 Ga0207641_10672066 3300026088 Bacteria 1018
139 Ga0207648_10026778 3300026089 Bacteria 5121
140 Ga0207648_10053749 3300026089 Bacteria 3519
141 Ga0207676_10148862 3300026095 Bacteria 2014
142 Ga0207676_10259168 3300026095 Bacteria 1569
143 Ga0207676_10346811 3300026095 Unclassified 1372
144 Ga0207676_10435466 3300026095 Bacteria 1233
145 Ga0207676_10730986 3300026095 Bacteria 961
146 Ga0207675_100005184 3300026118 Bacteria 12547
147 Ga0207675_100011614 3300026118 Bacteria 8234
148 Ga0207675_100016413 3300026118 Bacteria 6915
149 Ga0207675_100194583 3300026118 Bacteria 1946
150 Ga0207683_10012773 3300026121 Bacteria 7167
151 Ga0207683_10065562 3300026121 Unclassified 3202
152 Ga0207428_10057143 3300027907 Bacteria 3098
153 Ga0207428_10268576 3300027907 Bacteria 1269
154 Ga0268265_10043124 3300028380 Bacteria 3351
155 Ga0268265_10453953 3300028380 Bacteria 1198
156 Ga0268265_10680137 3300028380 Bacteria 992
157 Ga0268265_10820488 3300028380 Bacteria 908
158 Ga0307515_10099040 3300028794 Bacteria 3543
159 Ga0307513_10017122 3300031456 Bacteria 8705
160 Ga0307513_10028415 3300031456 Bacteria 6396
161 Ga0307513_10041194 3300031456 Bacteria 5100
162 Ga0307509_10155613 3300031507 Bacteria 2193
163 Ga0307408_100006129 3300031548 Bacteria 7987
164 Ga0307406_10007591 3300031901 Bacteria 6021
165 Ga0307406_10469878 3300031901 Bacteria 1013
166 Ga0307409_100000256 3300031995 Bacteria 21516
167 Ga0307416_100051352 3300032002 Bacteria 3293
168 Ga0307411_10000537 3300032005 Bacteria 13380
169 Ga0373950_0000001 3300034818 Bacteria 1001987
170 Ga0373960_0099716 3300035121 Bacteria 940
171 Ga0451787_106342 3300041441 Bacteria 1221
172 Ga0451798_0311559 3300041458 Bacteria 807
173 Ga0451802_2096450 3300041460 Bacteria 2014
174 Ga0451807_0561322 3300041486 Bacteria 1378
175 Ga0451853_0982878 3300041512 Bacteria 1350
176 Ga0495585_0189169 3300046492 Unclassified 1054
177 Ga0495596_0154022 3300046500 Bacteria 893
178 Ga0495596_0189214 3300046500 Bacteria 800
179 Ga0495632_0020337 3300046519 Bacteria 3595
180 Ga0495632_0090894 3300046519 Bacteria 1447
181 Ga0495668_0060915 3300046616 Bacteria 2082
182 Ga0495625_0019395 3300046660 Bacteria 5276
183 Ga0495625_0126414 3300046660 Bacteria 1735
184 Ga0501032_0404486 3300049569 Unclassified 877
185 Ga0501036_0062509 3300049572 Bacteria 3154
186 Ga0501038_0682683 3300049574 Bacteria 771
187 Ga0501042_0176058 3300049578 Unclassified 1543
188 Ga0501067_0000020 3300049583 Bacteria 99898
189 Ga0501067_0107421 3300049583 Unclassified 1551
190 Ga0501068_0015637 3300049584 Bacteria 4361
191 Ga0501068_0209587 3300049584 Bacteria 1237
192 Ga0501068_0341455 3300049584 Bacteria 962
193 Ga0501069_0069328 3300049585 Bacteria 1974
194 Ga0501070_0000512 3300049586 Bacteria 35492
195 Ga0501070_0049853 3300049586 Bacteria 3476
196 Ga0501071_0010057 3300049587 Bacteria 6323
197 Ga0501071_0342115 3300049587 Unclassified 1138
198 Ga0501073_0002407 3300049589 Bacteria 14005
199 Ga0501073_0003149 3300049589 Bacteria 12375
200 Ga0501073_0004075 3300049589 Bacteria 10956
201 Ga0501074_0016768 3300049590 Bacteria 5315
202 Ga0501076_0013903 3300049592 Bacteria 6046
203 Ga0501079_0000797 3300049741 Bacteria 21451
204 Ga0501080_0003214 3300049742 Bacteria 14416
205 Ga0501080_0110944 3300049742 Bacteria 2542
206 Ga0501083_0004962 3300049744 Bacteria 9428
207 Ga0501083_0026274 3300049744 Bacteria 4025
208 Ga0501083_0290003 3300049744 Unclassified 1064
209 nmdc:mga08y16_176605_c1 3300050511 Bacteria 2218
210 nmdc:mga08y16_402790_c1 3300050511 Bacteria 1400
211 nmdc:mga08y16_502665_c1 3300050511 Bacteria 1231
212 nmdc:mga08y16_512585_c1 3300050511 Unclassified 1217
213 nmdc:mga08y16_5562_c1 3300050511 Bacteria 13196
214 nmdc:mga08y16_68506_c1 3300050511 Unclassified 3700
215 Ga0501084_0006588 3300054114 Bacteria 9543
216 Ga0501084_0319337 3300054114 Bacteria 1312
217 Ga0501082_0005564 3300060353 Bacteria 10939
218 Ga0501082_0480010 3300060353 Bacteria 1087
219 Ga0111539_10858605
220 rootL2_10041275
221 rootL2_10085473
222 Ga0070658_10654013
223 Ga0070676_10070040
224 Ga0070670_100007016
225 Ga0070677_10002475
226 Ga0070677_10143906
227 Ga0068869_100076203
228 Ga0070682_100006139
229 Ga0070682_100011023
230 Ga0070682_100072559
231 Ga0070660_100199164
232 Ga0070689_100000017
233 Ga0070691_10134243
234 Ga0070692_10092566
235 Ga0070669_100024857
236 Ga0070669_100066801
237 Ga0070675_100007776
238 Ga0070675_100032074
239 Ga0070675_100124590
240 Ga0070675_100536460
241 Ga0070674_100004639
242 Ga0070674_100159782
243 Ga0070674_100189272
244 Ga0070673_100058150
245 Ga0070673_100065786
246 Ga0070701_10065988
247 Ga0070700_100006399
248 Ga0070700_100061504
249 Ga0070708_100338468
250 Ga0070678_100010495
251 Ga0070678_100292374
252 Ga0068867_100056172
253 Ga0068867_100187782
254 Ga0068867_100429247
255 Ga0070685_10253029
256 Ga0070706_100256357
257 Ga0068853_100606553
258 Ga0070672_100017752
259 Ga0070672_100044307
260 Ga0070672_100711226
261 Ga0070686_100050699
262 Ga0070686_100147533
263 Ga0070693_100012877
264 Ga0070693_100429647
265 Ga0070665_100020296
266 Ga0070704_100159980
267 Ga0068854_100602582
268 Ga0068852_100790101
269 Ga0068859_100086765
270 Ga0068859_100332294
271 Ga0068864_100050507
272 Ga0068864_100051476
273 Ga0068864_100114050
274 Ga0068861_100000918
275 Ga0068861_100007627
276 Ga0068861_100017735
277 Ga0068861_100045528
278 Ga0068861_100076294
279 Ga0068870_10009668
280 Ga0068870_10026345
281 Ga0068870_10165912
282 Ga0068863_100070836
283 Ga0068863_100074008
284 Ga0068863_100171936
285 Ga0068858_100444230
286 Ga0068860_100007902
287 Ga0068860_100274990
288 Ga0068862_100017405
289 Ga0068862_100075874
290 Ga0068871_100207563
291 Ga0068865_100010661
292 Ga0068865_100044215
293 Ga0097620_100086765
294 Ga0097620_100332309
295 Ga0111539_10276475
296 Ga0111539_10776116
297 Ga0111539_11064425
298 Ga0105243_10313401
299 Ga0105242_10034092
300 Ga0105248_10411000
301 Ga0105249_11357349
302 Ga0157374_10836869
303 Ga0157375_10008405
304 Ga0157375_11391310
305 Ga0163163_10005171
306 Ga0163163_10675153
307 Ga0163163_11227870
308 Ga0157380_10005899
309 Ga0157380_10021852
310 Ga0157380_10094952
311 Ga0157380_10422908
312 Ga0157379_10157356
313 Ga0157376_10030306
314 Ga0163161_10174377
315 Ga0163161_10198676
316 Ga0207682_10001709
317 Ga0207682_10124334
318 Ga0207645_10078214
319 Ga0207643_10018208
320 Ga0207643_10018620
321 Ga0207643_10047111
322 Ga0207662_10101031
323 Ga0207681_10148616
324 Ga0207681_10158952
325 Ga0207650_10002971
326 Ga0207650_10137664
327 Ga0207659_10032405
328 Ga0207659_10174340
329 Ga0207686_10148555
330 Ga0207670_10000017
331 Ga0207670_10298271
332 Ga0207670_10498833
333 Ga0207669_10079908
334 Ga0207669_10271858
335 Ga0207704_10047501
336 Ga0207691_10004288
337 Ga0207691_10006093
338 Ga0207691_10016998
339 Ga0207691_10078190
340 Ga0207691_10317436
341 Ga0207711_10089275
342 Ga0207689_10015938
343 Ga0207651_10069832
344 Ga0207651_10195868
345 Ga0207651_10245253
346 Ga0207651_10427769
347 Ga0207668_10614676
348 Ga0207640_10520668
349 Ga0207658_10050296
350 Ga0207678_10740009
351 Ga0207708_10018096
352 Ga0207708_10089173
353 Ga0207708_10132871
354 Ga0207702_10072685
355 Ga0207641_10053850
356 Ga0207641_10672066
357 Ga0207648_10026778
358 Ga0207648_10053749
359 Ga0207676_10148862
360 Ga0207676_10259168
361 Ga0207676_10346811
362 Ga0207676_10435466
363 Ga0207676_10730986
364 Ga0207675_100005184
365 Ga0207675_100011614
366 Ga0207675_100016413
367 Ga0207675_100194583
368 Ga0207683_10012773
369 Ga0207683_10065562
370 Ga0207428_10057143
371 Ga0207428_10268576
372 Ga0268265_10043124
373 Ga0268265_10453953
374 Ga0268265_10680137
375 Ga0268265_10820488
376 Ga0307515_10099040
377 Ga0307513_10017122
378 Ga0307513_10028415
379 Ga0307513_10041194
380 Ga0307509_10155613
381 Ga0307408_100006129
382 Ga0307406_10007591
383 Ga0307406_10469878
384 Ga0307409_100000256
385 Ga0307416_100051352
386 Ga0307411_10000537
387 Ga0373950_0000001
388 Ga0373960_0099716
389 Ga0451787_106342
390 Ga0451798_0311559
391 Ga0451802_2096450
392 Ga0451807_0561322
393 Ga0451853_0982878
394 Ga0495585_0189169
395 Ga0495596_0154022
396 Ga0495596_0189214
397 Ga0495632_0020337
398 Ga0495632_0090894
399 Ga0495668_0060915
400 Ga0495625_0019395
401 Ga0495625_0126414
402 Ga0501032_0404486
403 Ga0501036_0062509
404 Ga0501038_0682683
405 Ga0501042_0176058
406 Ga0501067_0000020
407 Ga0501067_0107421
408 Ga0501068_0015637
409 Ga0501068_0209587
410 Ga0501068_0341455
411 Ga0501069_0069328
412 Ga0501070_0000512
413 Ga0501070_0049853
414 Ga0501071_0010057
415 Ga0501071_0342115
416 Ga0501073_0002407
417 Ga0501073_0003149
418 Ga0501073_0004075
419 Ga0501074_0016768
420 Ga0501076_0013903
421 Ga0501079_0000797
422 Ga0501080_0003214
423 Ga0501080_0110944
424 Ga0501083_0004962
425 Ga0501083_0026274
426 Ga0501083_0290003
427 nmdc:mga08y16_176605_c1
428 nmdc:mga08y16_402790_c1
429 nmdc:mga08y16_502665_c1
430 nmdc:mga08y16_512585_c1
431 nmdc:mga08y16_5562_c1
432 nmdc:mga08y16_68506_c1
433 Ga0501084_0006588
434 Ga0501084_0319337
435 Ga0501082_0005564
436 Ga0501082_0480010

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08713

DNA_alkylation

DNA alkylation repair enzyme

26

234

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zbo-assembly2.cif.gz_B a new family of proteins related to the heat-like repeat dna glycosylases with affinity for branched dna structures 0.8056 11 221
3zbo-assembly2.cif.gz_B a new family of proteins related to the heat-like repeat dna glycosylases with affinity for branched dna structures 0.7733 11 221
6tbl-assembly1.cif.gz_A crystal structure of mms19(ctd)-ciao1-ciao2b cia targeting complex 0.7604 116 218
8aw4-assembly1.cif.gz_B structure of a complex of biosynthetic proteins bb-e3 and bgfpd-yy 0.7358 117 221
8fl4-assembly1.cif.gz_NU human nuclear pre-60s ribosomal subunit (state i3) 0.6939 122 221
ID Description Score Start End Superfamily
af_O77327_1091_1211_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.86 120 220 1.25.10.10
af_Q5AFD2_791_919_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.8596 119 220 1.25.10.10
af_Q10178_911_1031_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.8585 119 220 1.25.10.10
af_Q9VJ29_648_757_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.8357 120 221 1.25.10.10
af_A0A2R8RNC7_97_205_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.7962 149 220 1.25.10.10
ID Description Score Start End GO Terms
AF-A0A2V9TBX0-F1-model_v4 DNA alkylation repair protein 0.9971 9 100
AF-A0A530AKR3-F1-model_v4 DNA alkylation repair protein 0.9964 140 221
AF-F8C7S4-F1-model_v4 DNA alkylation repair protein 0.9956 9 220
AF-A0A0S2FJJ3-F1-model_v4 deleted 0.9951 9 221
AF-A0A2S6B5S5-F1-model_v4 DNA alkylation repair enzyme 0.9948 11 220

Map