F329342
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 217 | 124 | 207 | 397 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2738541280|2738739665 |
| Length | 478 |
| Sequence | RADDAVIVINAGSSSIKFSMYAGADLQLRAKGKIENLYAGQTRFTAQDGAGQPSAEHVWPGAPLAHGEAMRYLVEYAQGHLQGHRVVAIGHRIVHGGTDFSGPVKLDEDVVARLDTLVPLAPLHQPHNLAPVRSIFALAPHVLQVGCFDTAFHTAQPPLAQAFALPPEITERGVRRYGFHGLSYEYIASVLPSLDDAQAAPPPAGSAAAQAGAGALGGVLPVLLGGAPAAASHAALGGAAPAARHAAPLAGGRVVAAHLGNGASMCAMHGGRSVATTMGFTAVDGLPMGTRCGSVDPGVVLYLMDELQMGQSDIQRLLYQQSGLLGVSGISSDMRTLEQSGDPRARLAIELMVYRIGRELGSLAAALGGLDGIVFSGGIGENSVALRSAVCRDAAWLGVRLDEAANAAGAAGAVGAAGAAGAAGAGAAAPDTAAAAARAPLPGGAFRISAAGSAVPVWVVPANEELMIARHAQSLLEA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2508501128 | Bradyrhizobium sp. ARR65 | Isolate | Nodule |
| 2 | 2643221645 | Massilia sp. Root351 | Isolate | Unclassified |
| 3 | 2643221664 | Massilia sp. Root418 | Isolate | Unclassified |
| 4 | 2738541280 | Massilia sp. GV090 | Isolate | Unclassified |
| 5 | 2738541300 | Massilia sp. GV016 | Isolate | Unclassified |
| 6 | 2738543013 | Variovorax sp. BT01 | Isolate | Unclassified |
| 7 | 2738543018 | Massilia sp. GV045 | Isolate | Unclassified |
| 8 | 2738543030 | Massilia sp. GV097 | Isolate | Unclassified |
| 9 | 2885429604 | Sphingomonas sp. WZY 27 | Isolate | Rhizosphere |
| 10 | 2919709256 | Sphingobium xenophagum 4256 | Isolate | Unclassified |
| 11 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 12 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 13 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 14 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 27 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 28 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 29 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 30 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 31 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 32 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 33 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 34 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 36 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 37 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 38 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 39 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 40 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 41 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 42 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 43 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 44 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 45 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 50 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 52 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300027512 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 69 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 71 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 72 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 73 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 74 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 75 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 76 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 77 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 78 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 79 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 80 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 81 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 82 | 3300042461 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 | Metagenome | Rhizosphere |
| 83 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 84 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 85 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 86 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 90 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 91 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 92 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 93 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 94 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 95 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 96 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 97 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 98 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 99 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 100 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 101 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 102 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 104 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 106 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300053091 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere | Metagenome | Endosphere |
| 124 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.39 |
| Metatranscriptomes | 0 |
| Isolates | 4.61 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.69 |
| Nodule | 0.92 |
| Rhizoplane | 5.99 |
| Rhizosphere | 82.49 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 6.91 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25154J39366_1000278 | 3300002738 | Bacteria | 31200 |
| 2 | Ga0055536_1019515 | 3300003781 | Bacteria | 2127 |
| 3 | Ga0055534_1001802 | 3300003784 | Bacteria | 8049 |
| 4 | Ga0070683_100141181 | 3300005329 | Bacteria | 2282 |
| 5 | Ga0070680_100003288 | 3300005336 | Bacteria | 12060 |
| 6 | Ga0070660_100037854 | 3300005339 | Bacteria | 3658 |
| 7 | Ga0070668_100006094 | 3300005347 | Bacteria | 8943 |
| 8 | Ga0070668_100007739 | 3300005347 | Bacteria | 7975 |
| 9 | Ga0070668_100231663 | 3300005347 | Bacteria | 1527 |
| 10 | Ga0070675_100155212 | 3300005354 | Bacteria | 1965 |
| 11 | Ga0070673_100174158 | 3300005364 | Bacteria | 1838 |
| 12 | Ga0070708_100048648 | 3300005445 | Bacteria | 3749 |
| 13 | Ga0070678_100108793 | 3300005456 | Bacteria | 2164 |
| 14 | Ga0070706_100077230 | 3300005467 | Bacteria | 3082 |
| 15 | Ga0070706_100214615 | 3300005467 | Bacteria | 1796 |
| 16 | Ga0070707_100029414 | 3300005468 | Bacteria | 5230 |
| 17 | Ga0070707_100032340 | 3300005468 | Bacteria | 4984 |
| 18 | Ga0070707_100041114 | 3300005468 | Bacteria | 4424 |
| 19 | Ga0070707_100063117 | 3300005468 | Bacteria | 3555 |
| 20 | Ga0070698_100031033 | 3300005471 | Bacteria | 5541 |
| 21 | Ga0070698_100071746 | 3300005471 | Bacteria | 3472 |
| 22 | Ga0070699_100046084 | 3300005518 | Bacteria | 3773 |
| 23 | Ga0070699_100202062 | 3300005518 | Bacteria | 1767 |
| 24 | Ga0070679_100010676 | 3300005530 | Bacteria | 8717 |
| 25 | Ga0070697_100010443 | 3300005536 | Bacteria | 7247 |
| 26 | Ga0070697_100047111 | 3300005536 | Bacteria | 3496 |
| 27 | Ga0070697_100051230 | 3300005536 | Bacteria | 3354 |
| 28 | Ga0070697_100144598 | 3300005536 | Bacteria | 2001 |
| 29 | Ga0068855_100141694 | 3300005563 | Bacteria | 2740 |
| 30 | Ga0068857_100059590 | 3300005577 | Bacteria | 3391 |
| 31 | Ga0068854_100060112 | 3300005578 | Bacteria | 2748 |
| 32 | Ga0068862_100051966 | 3300005844 | Bacteria | 3506 |
| 33 | Ga0081455_10183170 | 3300005937 | Bacteria | 1584 |
| 34 | Ga0081540_1001938 | 3300005983 | Bacteria | 17324 |
| 35 | Ga0070717_10000801 | 3300006028 | Bacteria | 20674 |
| 36 | Ga0070712_100003625 | 3300006175 | Bacteria | 9524 |
| 37 | Ga0075428_100003260 | 3300006844 | Bacteria | 17772 |
| 38 | Ga0075428_100012571 | 3300006844 | Bacteria | 9412 |
| 39 | Ga0075428_100077251 | 3300006844 | Bacteria | 3634 |
| 40 | Ga0075428_100101600 | 3300006844 | Bacteria | 3135 |
| 41 | Ga0075428_100237726 | 3300006844 | Bacteria | 1966 |
| 42 | Ga0075430_100021998 | 3300006846 | Bacteria | 5420 |
| 43 | Ga0075430_100097923 | 3300006846 | Bacteria | 2450 |
| 44 | Ga0075431_100000931 | 3300006847 | Bacteria | 25851 |
| 45 | Ga0075431_100006194 | 3300006847 | Bacteria | 11874 |
| 46 | Ga0075431_100121406 | 3300006847 | Bacteria | 2696 |
| 47 | Ga0075431_100204985 | 3300006847 | Bacteria | 2016 |
| 48 | Ga0075433_10000747 | 3300006852 | Bacteria | 22314 |
| 49 | Ga0075433_10001258 | 3300006852 | Bacteria | 18511 |
| 50 | Ga0075433_10054452 | 3300006852 | Bacteria | 3490 |
| 51 | Ga0075433_10113632 | 3300006852 | Bacteria | 2402 |
| 52 | Ga0075433_10167932 | 3300006852 | Bacteria | 1953 |
| 53 | Ga0075434_100001047 | 3300006871 | Bacteria | 22564 |
| 54 | Ga0075434_100280024 | 3300006871 | Bacteria | 1687 |
| 55 | Ga0075429_100004302 | 3300006880 | Bacteria | 12233 |
| 56 | Ga0075429_100035581 | 3300006880 | Bacteria | 4331 |
| 57 | Ga0075429_100068373 | 3300006880 | Bacteria | 3091 |
| 58 | Ga0075429_100158101 | 3300006880 | Bacteria | 1985 |
| 59 | Ga0079104_1017973 | 3300006946 | Bacteria | 2016 |
| 60 | Ga0075435_100011078 | 3300007076 | Bacteria | 6613 |
| 61 | Ga0075435_100034773 | 3300007076 | Bacteria | 3995 |
| 62 | Ga0075435_100045279 | 3300007076 | Bacteria | 3527 |
| 63 | Ga0075435_100280376 | 3300007076 | Bacteria | 1423 |
| 64 | Ga0099794_10000411 | 3300007265 | Bacteria | 14409 |
| 65 | Ga0114129_10002217 | 3300009147 | Bacteria | 26788 |
| 66 | Ga0114129_10005606 | 3300009147 | Bacteria | 17768 |
| 67 | Ga0114129_10008410 | 3300009147 | Bacteria | 14697 |
| 68 | Ga0114129_10013610 | 3300009147 | Bacteria | 11592 |
| 69 | Ga0114129_10040370 | 3300009147 | Bacteria | 6578 |
| 70 | Ga0114129_10051621 | 3300009147 | Bacteria | 5773 |
| 71 | Ga0114129_10081853 | 3300009147 | Bacteria | 4487 |
| 72 | Ga0114129_10122318 | 3300009147 | Bacteria | 3581 |
| 73 | Ga0114129_10175493 | 3300009147 | Unclassified | 2919 |
| 74 | Ga0114129_10539109 | 3300009147 | Bacteria | 1519 |
| 75 | Ga0105237_10037829 | 3300009545 | Bacteria | 4875 |
| 76 | Ga0105238_10000229 | 3300009551 | Bacteria | 62541 |
| 77 | Ga0105239_10313668 | 3300010375 | Bacteria | 1768 |
| 78 | Ga0209646_1000023 | 3300025246 | Bacteria | 441100 |
| 79 | Ga0209130_1003718 | 3300025284 | Bacteria | 6258 |
| 80 | Ga0209675_1004162 | 3300025291 | Bacteria | 6553 |
| 81 | Ga0209758_1002444 | 3300025297 | Bacteria | 18965 |
| 82 | Ga0209257_1004936 | 3300025304 | Bacteria | 9791 |
| 83 | Ga0207684_10002028 | 3300025910 | Bacteria | 20866 |
| 84 | Ga0207684_10029172 | 3300025910 | Bacteria | 4699 |
| 85 | Ga0207684_10075591 | 3300025910 | Bacteria | 2863 |
| 86 | Ga0207707_10161023 | 3300025912 | Bacteria | 1962 |
| 87 | Ga0207693_10006058 | 3300025915 | Bacteria | 10017 |
| 88 | Ga0207663_10031149 | 3300025916 | Bacteria | 3154 |
| 89 | Ga0207657_10029985 | 3300025919 | Bacteria | 4944 |
| 90 | Ga0207646_10019185 | 3300025922 | Bacteria | 6357 |
| 91 | Ga0207646_10032253 | 3300025922 | Bacteria | 4740 |
| 92 | Ga0207646_10050634 | 3300025922 | Bacteria | 3716 |
| 93 | Ga0207694_10000260 | 3300025924 | Bacteria | 50288 |
| 94 | Ga0207659_10105667 | 3300025926 | Bacteria | 2131 |
| 95 | Ga0207668_10015391 | 3300025972 | Bacteria | 4752 |
| 96 | Ga0207668_10030224 | 3300025972 | Bacteria | 3558 |
| 97 | Ga0207640_10048368 | 3300025981 | Bacteria | 2748 |
| 98 | Ga0207641_10146731 | 3300026088 | Bacteria | 2134 |
| 99 | Ga0207641_10231368 | 3300026088 | Bacteria | 1718 |
| 100 | Ga0207683_10025292 | 3300026121 | Bacteria | 5121 |
| 101 | Ga0209179_1001073 | 3300027512 | Bacteria | 3173 |
| 102 | Ga0209588_1006835 | 3300027671 | Bacteria | 3336 |
| 103 | Ga0207428_10124351 | 3300027907 | Bacteria | 1976 |
| 104 | Ga0268265_10032808 | 3300028380 | Bacteria | 3768 |
| 105 | Ga0265328_10000608 | 3300031239 | Bacteria | 16653 |
| 106 | Ga0265339_10044325 | 3300031249 | Bacteria | 2454 |
| 107 | Ga0307509_10067271 | 3300031507 | Bacteria | 3754 |
| 108 | Ga0307508_10049824 | 3300031616 | Bacteria | 3730 |
| 109 | Ga0307414_10005051 | 3300032004 | Bacteria | 7227 |
| 110 | Ga0373937_0059926 | 3300036401 | Bacteria | 3498 |
| 111 | Ga0373925_0262727 | 3300037068 | Unclassified | 1387 |
| 112 | Ga0395900_0023424 | 3300037418 | Bacteria | 6320 |
| 113 | Ga0395898_0018925 | 3300037466 | Bacteria | 7016 |
| 114 | Ga0395898_0329649 | 3300037466 | Bacteria | 1455 |
| 115 | Ga0436364_0077338 | 3300037853 | Bacteria | 4976 |
| 116 | Ga0436360_0209156 | 3300039438 | Bacteria | 5151 |
| 117 | Ga0436363_0467903 | 3300039450 | Bacteria | 2379 |
| 118 | Ga0439460_0042220 | 3300042461 | Bacteria | 1343 |
| 119 | Ga0453683_0009374 | 3300044673 | Bacteria | 6539 |
| 120 | Ga0466970_0033009 | 3300044765 | Bacteria | 2736 |
| 121 | Ga0466959_0164071 | 3300045049 | Bacteria | 1561 |
| 122 | Ga0495638_0000055 | 3300046460 | Bacteria | 196038 |
| 123 | Ga0495618_0131311 | 3300046514 | Bacteria | 1603 |
| 124 | Ga0495674_0072000 | 3300047319 | Bacteria | 2982 |
| 125 | Ga0495674_0121194 | 3300047319 | Bacteria | 2209 |
| 126 | Ga0496102_0021616 | 3300048905 | Bacteria | 5692 |
| 127 | Ga0496102_0085707 | 3300048905 | Bacteria | 2909 |
| 128 | Ga0496103_0009934 | 3300048906 | Bacteria | 5628 |
| 129 | Ga0496104_0016827 | 3300048907 | Bacteria | 6647 |
| 130 | Ga0496106_0000385 | 3300048909 | Bacteria | 31419 |
| 131 | Ga0496107_0001444 | 3300048910 | Bacteria | 14711 |
| 132 | Ga0496108_0000516 | 3300048911 | Bacteria | 30275 |
| 133 | Ga0496109_0001463 | 3300048912 | Bacteria | 19602 |
| 134 | Ga0496110_0012604 | 3300048913 | Bacteria | 6954 |
| 135 | Ga0496111_0092223 | 3300048914 | Bacteria | 2220 |
| 136 | Ga0496112_0009104 | 3300048915 | Bacteria | 8922 |
| 137 | Ga0496112_0257615 | 3300048915 | Bacteria | 1695 |
| 138 | Ga0496115_0056186 | 3300048918 | Bacteria | 3163 |
| 139 | Ga0496126_0320346 | 3300048929 | Bacteria | 1274 |
| 140 | Ga0501031_0000010 | 3300049568 | Bacteria | 146435 |
| 141 | Ga0501032_0000023 | 3300049569 | Bacteria | 146435 |
| 142 | Ga0501032_0071668 | 3300049569 | Bacteria | 2309 |
| 143 | Ga0501033_0000104 | 3300049570 | Bacteria | 81029 |
| 144 | Ga0501033_0022130 | 3300049570 | Bacteria | 4796 |
| 145 | Ga0501033_0079414 | 3300049570 | Bacteria | 2407 |
| 146 | Ga0501033_0094700 | 3300049570 | Bacteria | 2183 |
| 147 | Ga0501034_0000116 | 3300049571 | Bacteria | 146442 |
| 148 | Ga0501034_0219038 | 3300049571 | Bacteria | 1856 |
| 149 | Ga0501036_0000015 | 3300049572 | Bacteria | 146442 |
| 150 | Ga0501036_0105402 | 3300049572 | Bacteria | 2384 |
| 151 | Ga0501037_0000023 | 3300049573 | Bacteria | 146542 |
| 152 | Ga0501038_0000025 | 3300049574 | Bacteria | 146542 |
| 153 | Ga0501038_0037115 | 3300049574 | Bacteria | 4275 |
| 154 | Ga0501038_0138195 | 3300049574 | Bacteria | 1995 |
| 155 | Ga0501038_0291864 | 3300049574 | Bacteria | 1281 |
| 156 | Ga0501039_0000691 | 3300049575 | Bacteria | 24283 |
| 157 | Ga0501039_0035425 | 3300049575 | Bacteria | 3851 |
| 158 | Ga0501040_0007003 | 3300049576 | Bacteria | 7306 |
| 159 | Ga0501043_0000070 | 3300049579 | Bacteria | 89839 |
| 160 | Ga0501047_0005596 | 3300049581 | Bacteria | 11833 |
| 161 | Ga0501047_0073908 | 3300049581 | Bacteria | 3282 |
| 162 | Ga0501070_0018099 | 3300049586 | Bacteria | 5910 |
| 163 | Ga0501035_0001454 | 3300049822 | Bacteria | 24283 |
| 164 | Ga0501035_0009629 | 3300049822 | Bacteria | 8986 |
| 165 | Ga0501035_0024819 | 3300049822 | Bacteria | 5496 |
| 166 | Ga0501035_0036072 | 3300049822 | Bacteria | 4483 |
| 167 | Ga0501035_0073438 | 3300049822 | Bacteria | 3026 |
| 168 | Ga0501035_0277531 | 3300049822 | Bacteria | 1417 |
| 169 | Ga0501044_0000069 | 3300049823 | Bacteria | 125974 |
| 170 | Ga0501044_0009510 | 3300049823 | Bacteria | 10581 |
| 171 | Ga0501044_0024110 | 3300049823 | Bacteria | 6464 |
| 172 | Ga0501044_0136081 | 3300049823 | Bacteria | 2448 |
| 173 | Ga0501044_0159639 | 3300049823 | Bacteria | 2232 |
| 174 | Ga0501044_0166766 | 3300049823 | Bacteria | 2176 |
| 175 | Ga0501044_0234683 | 3300049823 | Bacteria | 1780 |
| 176 | nmdc:mga05p37_10_c1 | 3300050507 | Bacteria | 113461 |
| 177 | nmdc:mga05p37_11721_c1 | 3300050507 | Bacteria | 10450 |
| 178 | nmdc:mga05p37_125225_c1 | 3300050507 | Unclassified | 3156 |
| 179 | nmdc:mga05p37_141034_c1 | 3300050507 | Bacteria | 2953 |
| 180 | nmdc:mga05p37_34713_c1 | 3300050507 | Bacteria | 6179 |
| 181 | nmdc:mga05p37_391719_c1 | 3300050507 | Bacteria | 1625 |
| 182 | nmdc:mga05p37_7529_c1 | 3300050507 | Bacteria | 12836 |
| 183 | nmdc:mga05p37_7890_c1 | 3300050507 | Bacteria | 12564 |
| 184 | nmdc:mga05p37_82100_c1 | 3300050507 | Bacteria | 3971 |
| 185 | nmdc:mga05p37_87046_c1 | 3300050507 | Bacteria | 3851 |
| 186 | nmdc:mga09592_25207_c1 | 3300050508 | Bacteria | 4920 |
| 187 | nmdc:mga09592_41994_c1 | 3300050508 | Bacteria | 3847 |
| 188 | nmdc:mga09592_8442_c1 | 3300050508 | Bacteria | 8375 |
| 189 | nmdc:mga0qj67_35671_c1 | 3300050509 | Bacteria | 3889 |
| 190 | nmdc:mga06r32_20482_c1 | 3300050510 | Bacteria | 6091 |
| 191 | nmdc:mga06r32_5104_c1 | 3300050510 | Bacteria | 11805 |
| 192 | nmdc:mga06r32_68496_c1 | 3300050510 | Bacteria | 3429 |
| 193 | nmdc:mga08y16_102915_c1 | 3300050511 | Bacteria | 2973 |
| 194 | nmdc:mga08y16_177846_c1 | 3300050511 | Bacteria | 2210 |
| 195 | nmdc:mga0n895_168389_c1 | 3300050512 | Bacteria | 2223 |
| 196 | nmdc:mga0n895_1947_c1 | 3300050512 | Bacteria | 15854 |
| 197 | nmdc:mga0n895_9227_c1 | 3300050512 | Bacteria | 8621 |
| 198 | nmdc:mga0n895_97948_c1 | 3300050512 | Bacteria | 2939 |
| 199 | nmdc:mga0rr50_3137_c1 | 3300050513 | Bacteria | 9438 |
| 200 | nmdc:mga0a205_186343_c1 | 3300050515 | Bacteria | 1968 |
| 201 | nmdc:mga0a205_230204_c1 | 3300050515 | Bacteria | 1737 |
| 202 | nmdc:mga0a205_29532_c1 | 3300050515 | Bacteria | 5247 |
| 203 | nmdc:mga0a205_4334_c1 | 3300050515 | Bacteria | 12721 |
| 204 | nmdc:mga0a205_594_c1 | 3300050515 | Bacteria | 28735 |
| 205 | nmdc:mga0a205_72072_c1 | 3300050515 | Bacteria | 3337 |
| 206 | Ga0500647_0013311 | 3300053091 | Bacteria | 3719 |
| 207 | Ga0500559_0001743 | 3300053136 | Bacteria | 11940 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300044765 | Ga0466970_0033009 | Ga0466970_0033009_1705_2706 | 322 |
| 2 | 3300048929 | Ga0496126_0320346 | Ga0496126_0320346_131_1240 | 357 |
| 3 | 3300053091 | Ga0500647_0013311 | Ga0500647_0013311_491_1738 | 361 |
| 4 | 3300049571 | Ga0501034_0219038 | Ga0501034_0219038_737_1828 | 363 |
| 5 | 3300053136 | Ga0500559_0001743 | Ga0500559_0001743_5562_6803 | 367 |
| 6 | 3300025297 | Ga0209758_1002444 | Ga0209758_100244412 | 369 |
| 7 | 3300005563 | Ga0068855_100141694 | Ga0068855_1001416942 | 372 |
| 8 | 3300006880 | Ga0075429_100158101 | Ga0075429_1001581012 | 372 |
| 9 | 3300006844 | Ga0075428_100237726 | Ga0075428_1002377262 | 373 |
| 10 | 3300006946 | Ga0079104_1017973 | Ga0079104_10179731 | 373 |
| 11 | 3300036401 | Ga0373937_0059926 | Ga0373937_0059926_2116_3300 | 376 |
| 12 | 3300037068 | Ga0373925_0262727 | Ga0373925_0262727_104_1288 | 376 |
| 13 | 3300047319 | Ga0495674_0072000 | Ga0495674_0072000_117_1301 | 376 |
| 14 | 3300005354 | Ga0070675_100155212 | Ga0070675_1001552122 | 383 |
| 15 | 3300005364 | Ga0070673_100174158 | Ga0070673_1001741582 | 383 |
| 16 | 3300005456 | Ga0070678_100108793 | Ga0070678_1001087932 | 383 |
| 17 | 3300006844 | Ga0075428_100012571 | Ga0075428_1000125714 | 383 |
| 18 | 3300006846 | Ga0075430_100021998 | Ga0075430_1000219983 | 383 |
| 19 | 3300006847 | Ga0075431_100006194 | Ga0075431_1000061946 | 383 |
| 20 | 3300006880 | Ga0075429_100035581 | Ga0075429_1000355813 | 383 |
| 21 | 3300009147 | Ga0114129_10005606 | Ga0114129_100056066 | 383 |
| 22 | 3300010375 | Ga0105239_10313668 | Ga0105239_103136681 | 383 |
| 23 | 3300025926 | Ga0207659_10105667 | Ga0207659_101056672 | 383 |
| 24 | 3300026121 | Ga0207683_10025292 | Ga0207683_100252924 | 383 |
| 25 | 3300049574 | Ga0501038_0291864 | Ga0501038_0291864_20_1171 | 383 |
| 26 | 3300050507 | nmdc:mga05p37_10_c1 | nmdc:mga05p37_10_c1_78486_79676 | 383 |
| 27 | 3300050508 | nmdc:mga09592_41994_c1 | nmdc:mga09592_41994_c1_1067_2257 | 383 |
| 28 | 3300050509 | nmdc:mga0qj67_35671_c1 | nmdc:mga0qj67_35671_c1_2056_3246 | 383 |
| 29 | 3300050510 | nmdc:mga06r32_5104_c1 | nmdc:mga06r32_5104_c1_6239_7429 | 383 |
| 30 | 3300027512 | Ga0209179_1001073 | Ga0209179_10010732 | 385 |
| 31 | iso_pu_bacteria | 2508501128 | 2509146469 | 385 |
| 32 | 3300005937 | Ga0081455_10183170 | Ga0081455_101831702 | 386 |
| 33 | 3300037853 | Ga0436364_0077338 | Ga0436364_0077338_3655_4839 | 386 |
| 34 | iso_pu_bacteria | 2919709256 | 2919709284 | 386 |
| 35 | 3300005578 | Ga0068854_100060112 | Ga0068854_1000601122 | 387 |
| 36 | 3300007076 | Ga0075435_100045279 | Ga0075435_1000452792 | 387 |
| 37 | 3300025981 | Ga0207640_10048368 | Ga0207640_100483682 | 387 |
| 38 | 3300032004 | Ga0307414_10005051 | Ga0307414_100050513 | 387 |
| 39 | iso_pu_bacteria | 2885429604 | 2885431733 | 387 |
| 40 | 3300006871 | Ga0075434_100280024 | Ga0075434_1002800242 | 388 |
| 41 | 3300009147 | Ga0114129_10175493 | Ga0114129_101754933 | 388 |
| 42 | 3300009545 | Ga0105237_10037829 | Ga0105237_100378294 | 388 |
| 43 | 3300045049 | Ga0466959_0164071 | Ga0466959_0164071_31_1242 | 388 |
| 44 | 3300048905 | Ga0496102_0085707 | Ga0496102_0085707_163_1374 | 388 |
| 45 | 3300048907 | Ga0496104_0016827 | Ga0496104_0016827_1496_2707 | 388 |
| 46 | 3300048909 | Ga0496106_0000385 | Ga0496106_0000385_20810_22021 | 388 |
| 47 | 3300048910 | Ga0496107_0001444 | Ga0496107_0001444_11063_12274 | 388 |
| 48 | 3300048911 | Ga0496108_0000516 | Ga0496108_0000516_8356_9567 | 388 |
| 49 | 3300048912 | Ga0496109_0001463 | Ga0496109_0001463_8267_9478 | 388 |
| 50 | 3300048913 | Ga0496110_0012604 | Ga0496110_0012604_3915_5126 | 388 |
| 51 | 3300048914 | Ga0496111_0092223 | Ga0496111_0092223_676_1887 | 388 |
| 52 | 3300048915 | Ga0496112_0009104 | Ga0496112_0009104_2465_3676 | 388 |
| 53 | 3300048918 | Ga0496115_0056186 | Ga0496115_0056186_112_1323 | 388 |
| 54 | 3300049569 | Ga0501032_0071668 | Ga0501032_0071668_173_1348 | 388 |
| 55 | 3300049581 | Ga0501047_0073908 | Ga0501047_0073908_20_1225 | 388 |
| 56 | 3300049823 | Ga0501044_0136081 | Ga0501044_0136081_1231_2436 | 388 |
| 57 | 3300006028 | Ga0070717_10000801 | Ga0070717_1000080121 | 389 |
| 58 | 3300006175 | Ga0070712_100003625 | Ga0070712_1000036256 | 389 |
| 59 | 3300025915 | Ga0207693_10006058 | Ga0207693_100060584 | 389 |
| 60 | 3300025916 | Ga0207663_10031149 | Ga0207663_100311493 | 389 |
| 61 | 3300031249 | Ga0265339_10044325 | Ga0265339_100443252 | 389 |
| 62 | 3300031507 | Ga0307509_10067271 | Ga0307509_100672712 | 389 |
| 63 | 3300037466 | Ga0395898_0018925 | Ga0395898_0018925_1577_2791 | 389 |
| 64 | 3300039450 | Ga0436363_0467903 | Ga0436363_0467903_567_1781 | 389 |
| 65 | 3300046514 | Ga0495618_0131311 | Ga0495618_0131311_76_1248 | 389 |
| 66 | 3300047319 | Ga0495674_0121194 | Ga0495674_0121194_541_1713 | 389 |
| 67 | 3300048915 | Ga0496112_0257615 | Ga0496112_0257615_309_1523 | 389 |
| 68 | 3300050515 | nmdc:mga0a205_186343_c1 | nmdc:mga0a205_186343_c1_31_1230 | 389 |
| 69 | 3300005347 | Ga0070668_100006094 | Ga0070668_10000609410 | 390 |
| 70 | 3300006847 | Ga0075431_100204985 | Ga0075431_1002049852 | 390 |
| 71 | 3300009147 | Ga0114129_10008410 | Ga0114129_1000841015 | 390 |
| 72 | 3300009147 | Ga0114129_10081853 | Ga0114129_100818532 | 390 |
| 73 | 3300025972 | Ga0207668_10015391 | Ga0207668_100153912 | 390 |
| 74 | 3300026088 | Ga0207641_10231368 | Ga0207641_102313682 | 390 |
| 75 | 3300037418 | Ga0395900_0023424 | Ga0395900_0023424_314_1486 | 390 |
| 76 | 3300037466 | Ga0395898_0329649 | Ga0395898_0329649_246_1418 | 390 |
| 77 | 3300044673 | Ga0453683_0009374 | Ga0453683_0009374_3099_4280 | 390 |
| 78 | 3300049568 | Ga0501031_0000010 | Ga0501031_0000010_124391_125563 | 390 |
| 79 | 3300049569 | Ga0501032_0000023 | Ga0501032_0000023_20873_22045 | 390 |
| 80 | 3300049570 | Ga0501033_0000104 | Ga0501033_0000104_79461_80633 | 390 |
| 81 | 3300049570 | Ga0501033_0022130 | Ga0501033_0022130_2941_4113 | 390 |
| 82 | 3300049570 | Ga0501033_0079414 | Ga0501033_0079414_424_1596 | 390 |
| 83 | 3300049570 | Ga0501033_0094700 | Ga0501033_0094700_779_1951 | 390 |
| 84 | 3300049571 | Ga0501034_0000116 | Ga0501034_0000116_124398_125570 | 390 |
| 85 | 3300049572 | Ga0501036_0000015 | Ga0501036_0000015_124398_125570 | 390 |
| 86 | 3300049572 | Ga0501036_0105402 | Ga0501036_0105402_161_1333 | 390 |
| 87 | 3300049573 | Ga0501037_0000023 | Ga0501037_0000023_124498_125670 | 390 |
| 88 | 3300049574 | Ga0501038_0000025 | Ga0501038_0000025_124498_125670 | 390 |
| 89 | 3300049574 | Ga0501038_0037115 | Ga0501038_0037115_2447_3619 | 390 |
| 90 | 3300049574 | Ga0501038_0138195 | Ga0501038_0138195_158_1330 | 390 |
| 91 | 3300049575 | Ga0501039_0000691 | Ga0501039_0000691_2239_3411 | 390 |
| 92 | 3300049575 | Ga0501039_0035425 | Ga0501039_0035425_2507_3679 | 390 |
| 93 | 3300049576 | Ga0501040_0007003 | Ga0501040_0007003_5309_6481 | 390 |
| 94 | 3300049579 | Ga0501043_0000070 | Ga0501043_0000070_67834_69006 | 390 |
| 95 | 3300049581 | Ga0501047_0005596 | Ga0501047_0005596_325_1497 | 390 |
| 96 | 3300049586 | Ga0501070_0018099 | Ga0501070_0018099_2745_3917 | 390 |
| 97 | 3300049822 | Ga0501035_0001454 | Ga0501035_0001454_20875_22047 | 390 |
| 98 | 3300049822 | Ga0501035_0024819 | Ga0501035_0024819_4078_5250 | 390 |
| 99 | 3300049822 | Ga0501035_0036072 | Ga0501035_0036072_3066_4238 | 390 |
| 100 | 3300049822 | Ga0501035_0073438 | Ga0501035_0073438_812_1984 | 390 |
| 101 | 3300049823 | Ga0501044_0000069 | Ga0501044_0000069_405_1577 | 390 |
| 102 | 3300049823 | Ga0501044_0009510 | Ga0501044_0009510_1185_2357 | 390 |
| 103 | 3300049823 | Ga0501044_0166766 | Ga0501044_0166766_600_1772 | 390 |
| 104 | 3300049823 | Ga0501044_0234683 | Ga0501044_0234683_391_1563 | 390 |
| 105 | 3300050507 | nmdc:mga05p37_11721_c1 | nmdc:mga05p37_11721_c1_1886_3091 | 390 |
| 106 | 3300050507 | nmdc:mga05p37_125225_c1 | nmdc:mga05p37_125225_c1_1524_2726 | 390 |
| 107 | 3300050507 | nmdc:mga05p37_141034_c1 | nmdc:mga05p37_141034_c1_197_1399 | 390 |
| 108 | 3300005329 | Ga0070683_100141181 | Ga0070683_1001411812 | 391 |
| 109 | 3300005336 | Ga0070680_100003288 | Ga0070680_1000032889 | 391 |
| 110 | 3300005339 | Ga0070660_100037854 | Ga0070660_1000378545 | 391 |
| 111 | 3300005530 | Ga0070679_100010676 | Ga0070679_1000106761 | 391 |
| 112 | 3300005577 | Ga0068857_100059590 | Ga0068857_1000595902 | 391 |
| 113 | 3300005983 | Ga0081540_1001938 | Ga0081540_10019383 | 391 |
| 114 | 3300007265 | Ga0099794_10000411 | Ga0099794_1000041114 | 391 |
| 115 | 3300009551 | Ga0105238_10000229 | Ga0105238_1000022929 | 391 |
| 116 | 3300025910 | Ga0207684_10075591 | Ga0207684_100755913 | 391 |
| 117 | 3300025912 | Ga0207707_10161023 | Ga0207707_101610232 | 391 |
| 118 | 3300025919 | Ga0207657_10029985 | Ga0207657_100299852 | 391 |
| 119 | 3300025924 | Ga0207694_10000260 | Ga0207694_1000026026 | 391 |
| 120 | 3300027671 | Ga0209588_1006835 | Ga0209588_10068352 | 391 |
| 121 | 3300031616 | Ga0307508_10049824 | Ga0307508_100498243 | 391 |
| 122 | 3300039438 | Ga0436360_0209156 | Ga0436360_0209156_2156_3340 | 391 |
| 123 | 3300046460 | Ga0495638_0000055 | Ga0495638_0000055_29792_30985 | 391 |
| 124 | 3300048905 | Ga0496102_0021616 | Ga0496102_0021616_4376_5566 | 391 |
| 125 | 3300048906 | Ga0496103_0009934 | Ga0496103_0009934_4339_5529 | 391 |
| 126 | 3300049822 | Ga0501035_0277531 | Ga0501035_0277531_130_1350 | 391 |
| 127 | 3300049823 | Ga0501044_0159639 | Ga0501044_0159639_35_1255 | 391 |
| 128 | 3300006852 | Ga0075433_10001258 | Ga0075433_100012585 | 392 |
| 129 | 3300006852 | Ga0075433_10167932 | Ga0075433_101679322 | 392 |
| 130 | 3300006880 | Ga0075429_100004302 | Ga0075429_10000430210 | 392 |
| 131 | 3300007076 | Ga0075435_100011078 | Ga0075435_1000110784 | 392 |
| 132 | 3300009147 | Ga0114129_10040370 | Ga0114129_100403706 | 392 |
| 133 | 3300009147 | Ga0114129_10051621 | Ga0114129_100516213 | 392 |
| 134 | 3300050507 | nmdc:mga05p37_34713_c1 | nmdc:mga05p37_34713_c1_279_1466 | 392 |
| 135 | 3300050508 | nmdc:mga09592_8442_c1 | nmdc:mga09592_8442_c1_2507_3694 | 392 |
| 136 | 3300050512 | nmdc:mga0n895_9227_c1 | nmdc:mga0n895_9227_c1_4841_6028 | 392 |
| 137 | 3300050513 | nmdc:mga0rr50_3137_c1 | nmdc:mga0rr50_3137_c1_3464_4651 | 392 |
| 138 | 3300050515 | nmdc:mga0a205_4334_c1 | nmdc:mga0a205_4334_c1_7252_8439 | 392 |
| 139 | iso_pu_bacteria | 2738543013 | 2739250644 | 392 |
| 140 | 3300003781 | Ga0055536_1019515 | Ga0055536_10195152 | 393 |
| 141 | 3300003784 | Ga0055534_1001802 | Ga0055534_10018028 | 393 |
| 142 | 3300005347 | Ga0070668_100007739 | Ga0070668_1000077399 | 393 |
| 143 | 3300005347 | Ga0070668_100231663 | Ga0070668_1002316632 | 393 |
| 144 | 3300005445 | Ga0070708_100048648 | Ga0070708_1000486482 | 393 |
| 145 | 3300005467 | Ga0070706_100077230 | Ga0070706_1000772302 | 393 |
| 146 | 3300005467 | Ga0070706_100214615 | Ga0070706_1002146151 | 393 |
| 147 | 3300005468 | Ga0070707_100029414 | Ga0070707_1000294143 | 393 |
| 148 | 3300005468 | Ga0070707_100032340 | Ga0070707_1000323401 | 393 |
| 149 | 3300005468 | Ga0070707_100041114 | Ga0070707_1000411142 | 393 |
| 150 | 3300005468 | Ga0070707_100063117 | Ga0070707_1000631171 | 393 |
| 151 | 3300005471 | Ga0070698_100031033 | Ga0070698_1000310334 | 393 |
| 152 | 3300005471 | Ga0070698_100071746 | Ga0070698_1000717463 | 393 |
| 153 | 3300005518 | Ga0070699_100046084 | Ga0070699_1000460842 | 393 |
| 154 | 3300005518 | Ga0070699_100202062 | Ga0070699_1002020621 | 393 |
| 155 | 3300005536 | Ga0070697_100010443 | Ga0070697_1000104431 | 393 |
| 156 | 3300005536 | Ga0070697_100047111 | Ga0070697_1000471113 | 393 |
| 157 | 3300005536 | Ga0070697_100051230 | Ga0070697_1000512301 | 393 |
| 158 | 3300005536 | Ga0070697_100144598 | Ga0070697_1001445982 | 393 |
| 159 | 3300005844 | Ga0068862_100051966 | Ga0068862_1000519662 | 393 |
| 160 | 3300006844 | Ga0075428_100003260 | Ga0075428_1000032606 | 393 |
| 161 | 3300006844 | Ga0075428_100077251 | Ga0075428_1000772512 | 393 |
| 162 | 3300006844 | Ga0075428_100101600 | Ga0075428_1001016002 | 393 |
| 163 | 3300006846 | Ga0075430_100097923 | Ga0075430_1000979232 | 393 |
| 164 | 3300006847 | Ga0075431_100000931 | Ga0075431_1000009315 | 393 |
| 165 | 3300006847 | Ga0075431_100121406 | Ga0075431_1001214063 | 393 |
| 166 | 3300006852 | Ga0075433_10000747 | Ga0075433_1000074716 | 393 |
| 167 | 3300006852 | Ga0075433_10054452 | Ga0075433_100544522 | 393 |
| 168 | 3300006852 | Ga0075433_10113632 | Ga0075433_101136322 | 393 |
| 169 | 3300006871 | Ga0075434_100001047 | Ga0075434_1000010474 | 393 |
| 170 | 3300006880 | Ga0075429_100068373 | Ga0075429_1000683733 | 393 |
| 171 | 3300007076 | Ga0075435_100034773 | Ga0075435_1000347732 | 393 |
| 172 | 3300007076 | Ga0075435_100280376 | Ga0075435_1002803762 | 393 |
| 173 | 3300009147 | Ga0114129_10002217 | Ga0114129_1000221720 | 393 |
| 174 | 3300009147 | Ga0114129_10013610 | Ga0114129_100136105 | 393 |
| 175 | 3300009147 | Ga0114129_10122318 | Ga0114129_101223182 | 393 |
| 176 | 3300009147 | Ga0114129_10539109 | Ga0114129_105391092 | 393 |
| 177 | 3300025284 | Ga0209130_1003718 | Ga0209130_10037182 | 393 |
| 178 | 3300025291 | Ga0209675_1004162 | Ga0209675_10041622 | 393 |
| 179 | 3300025304 | Ga0209257_1004936 | Ga0209257_100493612 | 393 |
| 180 | 3300025910 | Ga0207684_10002028 | Ga0207684_100020285 | 393 |
| 181 | 3300025910 | Ga0207684_10029172 | Ga0207684_100291723 | 393 |
| 182 | 3300025922 | Ga0207646_10019185 | Ga0207646_100191852 | 393 |
| 183 | 3300025922 | Ga0207646_10032253 | Ga0207646_100322532 | 393 |
| 184 | 3300025922 | Ga0207646_10050634 | Ga0207646_100506342 | 393 |
| 185 | 3300025972 | Ga0207668_10030224 | Ga0207668_100302242 | 393 |
| 186 | 3300026088 | Ga0207641_10146731 | Ga0207641_101467312 | 393 |
| 187 | 3300027907 | Ga0207428_10124351 | Ga0207428_101243512 | 393 |
| 188 | 3300028380 | Ga0268265_10032808 | Ga0268265_100328082 | 393 |
| 189 | 3300031239 | Ga0265328_10000608 | Ga0265328_1000060813 | 393 |
| 190 | 3300042461 | Ga0439460_0042220 | Ga0439460_0042220_31_1221 | 393 |
| 191 | 3300049822 | Ga0501035_0009629 | Ga0501035_0009629_4544_5809 | 393 |
| 192 | 3300049823 | Ga0501044_0024110 | Ga0501044_0024110_4241_5506 | 393 |
| 193 | 3300050507 | nmdc:mga05p37_391719_c1 | nmdc:mga05p37_391719_c1_261_1451 | 393 |
| 194 | 3300050507 | nmdc:mga05p37_7529_c1 | nmdc:mga05p37_7529_c1_5472_6662 | 393 |
| 195 | 3300050507 | nmdc:mga05p37_7890_c1 | nmdc:mga05p37_7890_c1_2929_4134 | 393 |
| 196 | 3300050507 | nmdc:mga05p37_82100_c1 | nmdc:mga05p37_82100_c1_442_1632 | 393 |
| 197 | 3300050507 | nmdc:mga05p37_87046_c1 | nmdc:mga05p37_87046_c1_332_1522 | 393 |
| 198 | 3300050508 | nmdc:mga09592_25207_c1 | nmdc:mga09592_25207_c1_222_1412 | 393 |
| 199 | 3300050510 | nmdc:mga06r32_20482_c1 | nmdc:mga06r32_20482_c1_602_1792 | 393 |
| 200 | 3300050510 | nmdc:mga06r32_68496_c1 | nmdc:mga06r32_68496_c1_1838_3028 | 393 |
| 201 | 3300050511 | nmdc:mga08y16_102915_c1 | nmdc:mga08y16_102915_c1_1502_2737 | 393 |
| 202 | 3300050511 | nmdc:mga08y16_177846_c1 | nmdc:mga08y16_177846_c1_460_1650 | 393 |
| 203 | 3300050512 | nmdc:mga0n895_168389_c1 | nmdc:mga0n895_168389_c1_555_1745 | 393 |
| 204 | 3300050512 | nmdc:mga0n895_1947_c1 | nmdc:mga0n895_1947_c1_11791_12996 | 393 |
| 205 | 3300050512 | nmdc:mga0n895_97948_c1 | nmdc:mga0n895_97948_c1_1056_2246 | 393 |
| 206 | 3300050515 | nmdc:mga0a205_230204_c1 | nmdc:mga0a205_230204_c1_400_1590 | 393 |
| 207 | 3300050515 | nmdc:mga0a205_29532_c1 | nmdc:mga0a205_29532_c1_819_2090 | 393 |
| 208 | 3300050515 | nmdc:mga0a205_594_c1 | nmdc:mga0a205_594_c1_16190_17395 | 393 |
| 209 | 3300050515 | nmdc:mga0a205_72072_c1 | nmdc:mga0a205_72072_c1_944_2134 | 393 |
| 210 | iso_pu_bacteria | 2643221645 | 2644250068 | 395 |
| 211 | iso_pu_bacteria | 2738541280 | 2738739665 | 395 |
| 212 | iso_pu_bacteria | 2738541300 | 2738846882 | 395 |
| 213 | iso_pu_bacteria | 2738543018 | 2739277857 | 395 |
| 214 | iso_pu_bacteria | 2738543030 | 2739346900 | 395 |
| 215 | iso_pu_bacteria | 2643221664 | 2644358757 | 396 |
| 216 | 3300002738 | JGI25154J39366_1000278 | JGI25154J39366_100027827 | 397 |
| 217 | 3300025246 | Ga0209646_1000023 | Ga0209646_1000023334 | 397 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6ioy-assembly2.cif.gz_C | crystal structure of porphyromonas gingivalis acetate kinase | 0.9323 | 5 | 392 |
| 7fjb-assembly1.cif.gz_B | kpacka (pduw) with amppnp, sodium acetate complex structure | 0.9241 | 6 | 391 |
| 4iz9-assembly1.cif.gz_A-2 | crystal structure of an acetate kinase from mycobacterium avium bound to an unknown acid-apcpp conjugate and manganese | 0.9207 | 3 | 394 |
| 3khy-assembly1.cif.gz_B | crystal structure of a propionate kinase from francisella tularensis subsp. tularensis schu s4 | 0.9205 | 1 | 392 |
| 3r9p-assembly1.cif.gz_B-2 | crystal structure of acka from mycobacterium paratuberculosis atcc baa-968 / k-10 | 0.9153 | 5 | 394 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1x3mA02 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.9606 | 200 | 393 | 3.30.420.40 |
| 2iirA02 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.9554 | 200 | 395 | 3.30.420.40 |
| 4h0oB02 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.9224 | 200 | 395 | 3.30.420.40 |
| 3khyB02 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.9174 | 200 | 393 | 3.30.420.40 |
| 2iirA02 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.9103 | 200 | 395 | 3.30.420.40 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A524BGV5-F1-model_v4 | Acetate kinase | 0.9919 | 235 | 393 |
GO:0005737
GO:0006083 GO:0008776 |
| AF-A0A529JKC7-F1-model_v4 | deleted | 0.9846 | 216 | 393 |
|
| AF-A0A6N6RZ08-F1-model_v4 | Acetate kinase | 0.9839 | 136 | 395 |
GO:0005524
GO:0005829 GO:0006083 GO:0008776 GO:0047761 |
| AF-A0A5R9FXH9-F1-model_v4 | Acetate kinase | 0.983 | 238 | 395 |
GO:0005829
GO:0006083 GO:0008776 |
| AF-A0A434I293-F1-model_v4 | Acetate kinase | 0.9827 | 234 | 395 |
GO:0005829
GO:0006083 GO:0008776 |
Predicted Structure (AlphaFold2)
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