F329110

General Info

Members Datasets Scaffolds Average Seq Length
217 174 434 514

Family's Representative Sequence

Representative Sequence 3300046459|Ga0495629_0033638|Ga0495629_0033638_1397_3028
Length 543
Sequence MSEILRFAPLMTTMKVGKNSPDDPSEVSVHDAPDTSPKDVPPLGATALVRVRGLGKRFGGTLALAGVDLDVHAGSVLALLGPNGAGKSTLIKVLAGVHQADAGQITVDGHPLGSHAASRSMSFIHQDLGLVEWMTVAESIALSIGYPRRGGLISWRRTRERCADALKTVAGHLDPDAPIARLSPAERSLVAISRGLAAHAKLIVLDEPTARLPAADCARLFRVLHTLRDQGHGILYVSHRLDDVYKVADTFAVLRDGHLVSHGPLAGRAPARLVHDIVGEELAGYRPAMMPADGPAVLTLDGVRTAGAGPVSLDVGPGEVLGLVGLSGAGHMDLGRALAGSRAVLAGRVLLGGQPYSPRTVADAVRLGVGFVSGDRQREGCAAELTVRENLLANPAAGGLSALSWISPRRERAEAADLIERLSVRPHDGEAPLATLSGGNQQKVVIGRWLRVGLRLLILEEPTASVDIGAKAAVYRLLDDGLAAGLAVLLISTDFEEVAGVCRRALVFVRGSVTAELSGPDLTVAELTRAASAMPLAGTATHP

Samples

Sample ID Description Type Environment
1 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
37 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
38 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
39 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
40 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
57 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
60 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
65 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
66 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
67 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
68 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
69 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
70 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
71 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
72 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
73 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
74 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
75 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
76 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
77 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
78 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
79 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
82 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
83 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
84 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
85 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
86 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
87 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
88 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
91 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
92 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
95 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
96 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
97 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
98 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
99 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
100 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
101 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
102 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
103 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
104 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
105 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
106 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
107 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
108 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
109 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
125 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
126 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
133 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
134 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
135 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
136 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
137 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
138 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
139 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
140 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
141 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
142 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
143 2643221615 Nocardioides sp. Root224 Isolate Unclassified
144 2643221647 Streptomyces sp. Root369 Isolate Unclassified
145 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
146 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
147 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
148 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
149 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
150 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
151 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
152 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
153 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
154 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
155 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
156 2867475112 Streptomyces sp. TM32 Isolate Unclassified
157 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
158 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
159 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
160 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
161 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
162 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
163 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
164 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
165 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
166 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
167 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
168 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
169 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
170 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
171 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
172 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
173 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
174 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.41
Metatranscriptomes 0.46
Isolates 16.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.91
Nodule 0.92
Rhizoplane 1.38
Rhizosphere 82.03
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495629_0033638 3300046459 Bacteria 3626
2 JGI25160J50197_1013058 3300003354 Bacteria 2850
3 Ga0006562J51391_1047734 3300003578 Bacteria 4210
4 Ga0070658_10026536 3300005327 Bacteria 4647
5 Ga0070666_10046116 3300005335 Bacteria 2923
6 Ga0070682_100091477 3300005337 Bacteria 1991
7 Ga0070671_100063511 3300005355 Bacteria 3075
8 Ga0070663_100010751 3300005455 Bacteria 5715
9 Ga0070678_100036535 3300005456 Bacteria 3440
10 Ga0070684_100029752 3300005535 Bacteria 4632
11 Ga0068853_100031560 3300005539 Bacteria 4482
12 Ga0068853_100042224 3300005539 Bacteria 3898
13 Ga0070665_100013801 3300005548 Bacteria 8127
14 Ga0068855_100017065 3300005563 Bacteria 8732
15 Ga0068855_100156047 3300005563 Bacteria 2593
16 Ga0070664_100046368 3300005564 Bacteria 3671
17 Ga0070664_100053510 3300005564 Bacteria 3422
18 Ga0068857_100251044 3300005577 Bacteria 1622
19 Ga0068854_100013631 3300005578 Bacteria 5342
20 Ga0068856_100019747 3300005614 Bacteria 6539
21 Ga0068856_100027986 3300005614 Bacteria 5499
22 Ga0068856_100150182 3300005614 Bacteria 2339
23 Ga0068852_100003178 3300005616 Bacteria 11468
24 Ga0068860_100000075 3300005843 Bacteria 172873
25 Ga0068862_100010449 3300005844 Bacteria 7665
26 Ga0081455_10004950 3300005937 Bacteria 14731
27 Ga0075365_10003130 3300006038 Bacteria 8429
28 Ga0075364_10043973 3300006051 Bacteria 2904
29 Ga0075367_10026572 3300006178 Bacteria 3285
30 Ga0105240_10051132 3300009093 Bacteria 5203
31 Ga0105241_10004321 3300009174 Bacteria 10509
32 Ga0105238_10008674 3300009551 Bacteria 10171
33 Ga0105239_10037833 3300010375 Bacteria 5287
34 Ga0105246_10009463 3300011119 Bacteria 6004
35 Ga0105246_10136882 3300011119 Bacteria 1837
36 Ga0157370_10034017 3300013104 Bacteria 4966
37 Ga0157369_10018558 3300013105 Bacteria 7797
38 Ga0157369_10196002 3300013105 Bacteria 2121
39 Ga0157374_10024268 3300013296 Bacteria 5434
40 Ga0157372_10150987 3300013307 Bacteria 2681
41 Ga0157375_10020676 3300013308 Bacteria 6018
42 Ga0182008_10001096 3300014497 Bacteria 18678
43 Ga0182007_10001650 3300015262 Bacteria 11813
44 Ga0207427_101185 3300025231 Bacteria 10188
45 Ga0209233_1000607 3300025261 Bacteria 18396
46 Ga0207426_1000338 3300025302 Bacteria 88019
47 Ga0207426_1000717 3300025302 Bacteria 38521
48 Ga0207426_1001838 3300025302 Bacteria 15637
49 Ga0207647_10016029 3300025904 Bacteria 5123
50 Ga0207647_10026691 3300025904 Bacteria 3775
51 Ga0207695_10001504 3300025913 Bacteria 38742
52 Ga0207671_10001011 3300025914 Bacteria 34405
53 Ga0207671_10040298 3300025914 Bacteria 3458
54 Ga0207652_10119056 3300025921 Bacteria 2348
55 Ga0207664_10002625 3300025929 Bacteria 11897
56 Ga0207690_10065368 3300025932 Bacteria 2487
57 Ga0207679_10091830 3300025945 Bacteria 2350
58 Ga0207667_10055867 3300025949 Bacteria 4149
59 Ga0207667_10072350 3300025949 Bacteria 3584
60 Ga0207651_10022404 3300025960 Bacteria 3862
61 Ga0207640_10064925 3300025981 Bacteria 2433
62 Ga0207639_10032532 3300026041 Bacteria 3840
63 Ga0207674_10016725 3300026116 Bacteria 8015
64 Ga0207683_10056381 3300026121 Bacteria 3447
65 Ga0207698_10019941 3300026142 Bacteria 4604
66 Ga0207698_10034663 3300026142 Bacteria 3682
67 Ga0268265_10083444 3300028380 Bacteria 2530
68 Ga0268264_10000136 3300028381 Bacteria 177180
69 Ga0307512_10001288 3300030522 Bacteria 35992
70 Ga0307508_10008662 3300031616 Bacteria 9391
71 Ga0307508_10050041 3300031616 Bacteria 3719
72 Ga0307409_100125435 3300031995 Bacteria 2183
73 Ga0373925_0032390 3300037068 Bacteria 3847
74 Ga0395899_0030113 3300037312 Bacteria 4083
75 Ga0395900_0036719 3300037418 Bacteria 5051
76 Ga0395898_0016829 3300037466 Bacteria 7469
77 Ga0395898_0118725 3300037466 Bacteria 2533
78 Ga0395901_0169814 3300038443 Bacteria 2288
79 Ga0395901_0191883 3300038443 Bacteria 2142
80 Ga0439436_0008943 3300041404 Bacteria 3074
81 Ga0439442_000545 3300042002 Bacteria 8319
82 Ga0439448_0010695 3300042005 Bacteria 2725
83 Ga0439449_0000399 3300042007 Bacteria 16088
84 Ga0439449_0002468 3300042007 Bacteria 7228
85 Ga0439449_0016110 3300042007 Bacteria 2811
86 Ga0439457_000350 3300042014 Bacteria 12846
87 Ga0439462_0005526 3300042015 Bacteria 3118
88 Ga0450896_001965 3300042133 Bacteria 2613
89 Ga0450899_000086 3300042135 Bacteria 7927
90 Ga0450908_002390 3300042184 Bacteria 3673
91 Ga0466972_0015160 3300044658 Bacteria 3853
92 Ga0466961_0007099 3300044693 Bacteria 7124
93 Ga0466963_0061987 3300044694 Bacteria 2501
94 Ga0466971_0000359 3300044719 Bacteria 17431
95 Ga0466970_0000152 3300044765 Bacteria 32457
96 Ga0466970_0030566 3300044765 Bacteria 2840
97 Ga0466959_0000546 3300045049 Bacteria 21926
98 Ga0466958_0020437 3300045836 Bacteria 3860
99 Ga0466967_0000066 3300045976 Bacteria 38575
100 Ga0466967_0073283 3300045976 Bacteria 3072
101 Ga0495603_0016465 3300046455 Bacteria 4472
102 Ga0495629_0057617 3300046459 Bacteria 2716
103 Ga0495638_0015225 3300046460 Bacteria 5170
104 Ga0495651_0001337 3300046462 Bacteria 19082
105 Ga0495651_0012776 3300046462 Bacteria 6483
106 Ga0495605_0002987 3300046474 Bacteria 10223
107 Ga0495594_0024812 3300046499 Bacteria 3222
108 Ga0495594_0063226 3300046499 Bacteria 2050
109 Ga0495606_0025987 3300046507 Bacteria 4179
110 Ga0495616_0003107 3300046513 Bacteria 10748
111 Ga0495620_0001911 3300046515 Bacteria 12200
112 Ga0495620_0010772 3300046515 Bacteria 4808
113 Ga0495628_0012738 3300046516 Bacteria 7084
114 Ga0495643_0003324 3300046522 Bacteria 11862
115 Ga0495648_0060074 3300046524 Bacteria 2264
116 Ga0495642_0014217 3300046528 Bacteria 3084
117 Ga0495652_0023031 3300046529 Bacteria 5523
118 Ga0495668_0013894 3300046616 Bacteria 4734
119 Ga0495668_0033421 3300046616 Bacteria 2890
120 Ga0495634_0028028 3300046642 Bacteria 3913
121 Ga0495635_0011600 3300046663 Bacteria 6176
122 Ga0495646_0015180 3300046680 Bacteria 4892
123 Ga0495613_0053367 3300046689 Bacteria 2974
124 Ga0495613_0079770 3300046689 Bacteria 2380
125 Ga0495624_0048527 3300046690 Bacteria 2694
126 Ga0495589_0003483 3300046794 Bacteria 8514
127 Ga0495589_0014612 3300046794 Bacteria 4040
128 Ga0495636_0007921 3300047318 Bacteria 4183
129 Ga0495676_0009359 3300047321 Bacteria 8928
130 Ga0495680_0056605 3300047322 Bacteria 3035
131 Ga0495687_001885 3300047443 Bacteria 18089
132 Ga0495687_004899 3300047443 Bacteria 8778
133 Ga0495687_028174 3300047443 Bacteria 2616
134 Ga0495685_007809 3300047447 Bacteria 3539
135 Ga0495681_0037534 3300047470 Bacteria 2385
136 Ga0495593_0020550 3300047673 Bacteria 3697
137 Ga0495602_0116138 3300048088 Bacteria 2163
138 Ga0495614_0029633 3300048089 Bacteria 2355
139 Ga0496108_0017086 3300048911 Bacteria 5932
140 Ga0496112_0054979 3300048915 Bacteria 3912
141 Ga0501032_0055020 3300049569 Bacteria 2677
142 Ga0501033_0003078 3300049570 Bacteria 13860
143 Ga0501034_0034797 3300049571 Bacteria 5107
144 Ga0501034_0039673 3300049571 Bacteria 4769
145 Ga0501034_0149181 3300049571 Bacteria 2314
146 Ga0501036_0003203 3300049572 Bacteria 13063
147 Ga0501037_0029070 3300049573 Bacteria 4082
148 Ga0501037_0108646 3300049573 Bacteria 1999
149 Ga0501038_0036864 3300049574 Bacteria 4291
150 Ga0501038_0131151 3300049574 Bacteria 2058
151 Ga0501039_0012438 3300049575 Bacteria 6499
152 Ga0501043_0002549 3300049579 Bacteria 15405
153 Ga0501046_0012538 3300049580 Bacteria 7209
154 Ga0501047_0165824 3300049581 Bacteria 2079
155 Ga0501067_0007419 3300049583 Bacteria 6094
156 Ga0501067_0013577 3300049583 Bacteria 4511
157 Ga0501069_0002629 3300049585 Bacteria 9160
158 Ga0501069_0012124 3300049585 Bacteria 4577
159 Ga0501071_0032576 3300049587 Bacteria 3702
160 Ga0501073_0002870 3300049589 Bacteria 12909
161 Ga0501073_0004898 3300049589 Bacteria 10049
162 Ga0501076_0036507 3300049592 Bacteria 3851
163 Ga0501080_0017144 3300049742 Bacteria 6691
164 Ga0501080_0020351 3300049742 Bacteria 6141
165 Ga0501080_0131117 3300049742 Bacteria 2321
166 Ga0501083_0028357 3300049744 Bacteria 3858
167 Ga0501035_0026245 3300049822 Bacteria 5331
168 Ga0501044_0144056 3300049823 Bacteria 2370
169 Ga0501045_0073100 3300049824 Bacteria 2525
170 nmdc:mga00v17_12797_c1 3300050491 Bacteria 4637
171 nmdc:mga0yw44_11519_c1 3300050492 Bacteria 4570
172 nmdc:mga0yw44_12775_c1 3300050492 Bacteria 4392
173 Ga0495601_0008770 3300053077 Bacteria 5964
174 Ga0495619_0058688 3300053085 Bacteria 2555
175 Ga0500556_0000162 3300053104 Bacteria 54322
176 Ga0500600_0031378 3300053149 Bacteria 3123
177 Ga0500616_0004947 3300053153 Bacteria 9249
178 Ga0501084_0128687 3300054114 Bacteria 2131
179 Ga0501084_0156146 3300054114 Bacteria 1924
180 Ga0501084_0178123 3300054114 Bacteria 1794
181 Ga0501082_0009093 3300060353 Bacteria 8571
182 Ga0501082_0096769 3300060353 Bacteria 2551
183 2585317408 2582581314 Bacteria 11452267
184 2616700999 2616644814 Bacteria 11555299
185 2644093390 2643221615 Bacteria 5487866
186 2644267484 2643221647 Bacteria 10741251
187 2644323000 2643221657 Bacteria 5490246
188 2644442130 2643221678 Bacteria 9540101
189 2785346362 2784746763 Bacteria 9783172
190 2785365808 2784746768 Bacteria 10036182
191 2785372585 2784746768 Bacteria 10036182
192 2793983172 2791355406 Bacteria 11364898
193 2808847204 2808606359 Bacteria 9866990
194 2808918013 2808606375 Bacteria 9466072
195 2812360677 2811994879 Bacteria 9313447
196 2852639521 2852635781 Bacteria 8251373
197 2862383548 2862382967 Bacteria 10317375
198 2863407380 2863404153 Bacteria 9672205
199 2867477519 2867475112 Bacteria 6909112
200 2939674142 2939669807 Bacteria 5028511
201 2945941593 2945941187 Bacteria 4682474
202 2946065217 2946064051 Bacteria 8957905
203 2954381262 2954380949 Bacteria 10050426
204 2954691855 2954691527 Bacteria 10720516
205 2954706965 2954701450 Bacteria 10834262
206 2990066488 2990059506 Bacteria 9321252
207 2997455705 2997451912 Bacteria 8492419
208 3006487699 3006486233 Bacteria 8157040
209 8008560871 8008558824 Bacteria 10610750
210 8025481639 8025478263 Bacteria 8209203
211 8047903361 8047893842 Bacteria 11723082
212 8048365952 8048356638 Bacteria 11044339
213 8048379199 8048369669 Bacteria 11666822
214 8048388305 8048379754 Bacteria 11877923
215 8048407350 8048406513 Bacteria 8936924
216 8054109304 8054107350 Bacteria 5022511
217 8056830827 8056829672 Bacteria 9045328
218 Ga0495629_0033638
219 JGI25160J50197_1013058
220 Ga0006562J51391_1047734
221 Ga0070658_10026536
222 Ga0070666_10046116
223 Ga0070682_100091477
224 Ga0070671_100063511
225 Ga0070663_100010751
226 Ga0070678_100036535
227 Ga0070684_100029752
228 Ga0068853_100031560
229 Ga0068853_100042224
230 Ga0070665_100013801
231 Ga0068855_100017065
232 Ga0068855_100156047
233 Ga0070664_100046368
234 Ga0070664_100053510
235 Ga0068857_100251044
236 Ga0068854_100013631
237 Ga0068856_100019747
238 Ga0068856_100027986
239 Ga0068856_100150182
240 Ga0068852_100003178
241 Ga0068860_100000075
242 Ga0068862_100010449
243 Ga0081455_10004950
244 Ga0075365_10003130
245 Ga0075364_10043973
246 Ga0075367_10026572
247 Ga0105240_10051132
248 Ga0105241_10004321
249 Ga0105238_10008674
250 Ga0105239_10037833
251 Ga0105246_10009463
252 Ga0105246_10136882
253 Ga0157370_10034017
254 Ga0157369_10018558
255 Ga0157369_10196002
256 Ga0157374_10024268
257 Ga0157372_10150987
258 Ga0157375_10020676
259 Ga0182008_10001096
260 Ga0182007_10001650
261 Ga0207427_101185
262 Ga0209233_1000607
263 Ga0207426_1000338
264 Ga0207426_1000717
265 Ga0207426_1001838
266 Ga0207647_10016029
267 Ga0207647_10026691
268 Ga0207695_10001504
269 Ga0207671_10001011
270 Ga0207671_10040298
271 Ga0207652_10119056
272 Ga0207664_10002625
273 Ga0207690_10065368
274 Ga0207679_10091830
275 Ga0207667_10055867
276 Ga0207667_10072350
277 Ga0207651_10022404
278 Ga0207640_10064925
279 Ga0207639_10032532
280 Ga0207674_10016725
281 Ga0207683_10056381
282 Ga0207698_10019941
283 Ga0207698_10034663
284 Ga0268265_10083444
285 Ga0268264_10000136
286 Ga0307512_10001288
287 Ga0307508_10008662
288 Ga0307508_10050041
289 Ga0307409_100125435
290 Ga0373925_0032390
291 Ga0395899_0030113
292 Ga0395900_0036719
293 Ga0395898_0016829
294 Ga0395898_0118725
295 Ga0395901_0169814
296 Ga0395901_0191883
297 Ga0439436_0008943
298 Ga0439442_000545
299 Ga0439448_0010695
300 Ga0439449_0000399
301 Ga0439449_0002468
302 Ga0439449_0016110
303 Ga0439457_000350
304 Ga0439462_0005526
305 Ga0450896_001965
306 Ga0450899_000086
307 Ga0450908_002390
308 Ga0466972_0015160
309 Ga0466961_0007099
310 Ga0466963_0061987
311 Ga0466971_0000359
312 Ga0466970_0000152
313 Ga0466970_0030566
314 Ga0466959_0000546
315 Ga0466958_0020437
316 Ga0466967_0000066
317 Ga0466967_0073283
318 Ga0495603_0016465
319 Ga0495629_0057617
320 Ga0495638_0015225
321 Ga0495651_0001337
322 Ga0495651_0012776
323 Ga0495605_0002987
324 Ga0495594_0024812
325 Ga0495594_0063226
326 Ga0495606_0025987
327 Ga0495616_0003107
328 Ga0495620_0001911
329 Ga0495620_0010772
330 Ga0495628_0012738
331 Ga0495643_0003324
332 Ga0495648_0060074
333 Ga0495642_0014217
334 Ga0495652_0023031
335 Ga0495668_0013894
336 Ga0495668_0033421
337 Ga0495634_0028028
338 Ga0495635_0011600
339 Ga0495646_0015180
340 Ga0495613_0053367
341 Ga0495613_0079770
342 Ga0495624_0048527
343 Ga0495589_0003483
344 Ga0495589_0014612
345 Ga0495636_0007921
346 Ga0495676_0009359
347 Ga0495680_0056605
348 Ga0495687_001885
349 Ga0495687_004899
350 Ga0495687_028174
351 Ga0495685_007809
352 Ga0495681_0037534
353 Ga0495593_0020550
354 Ga0495602_0116138
355 Ga0495614_0029633
356 Ga0496108_0017086
357 Ga0496112_0054979
358 Ga0501032_0055020
359 Ga0501033_0003078
360 Ga0501034_0034797
361 Ga0501034_0039673
362 Ga0501034_0149181
363 Ga0501036_0003203
364 Ga0501037_0029070
365 Ga0501037_0108646
366 Ga0501038_0036864
367 Ga0501038_0131151
368 Ga0501039_0012438
369 Ga0501043_0002549
370 Ga0501046_0012538
371 Ga0501047_0165824
372 Ga0501067_0007419
373 Ga0501067_0013577
374 Ga0501069_0002629
375 Ga0501069_0012124
376 Ga0501071_0032576
377 Ga0501073_0002870
378 Ga0501073_0004898
379 Ga0501076_0036507
380 Ga0501080_0017144
381 Ga0501080_0020351
382 Ga0501080_0131117
383 Ga0501083_0028357
384 Ga0501035_0026245
385 Ga0501044_0144056
386 Ga0501045_0073100
387 nmdc:mga00v17_12797_c1
388 nmdc:mga0yw44_11519_c1
389 nmdc:mga0yw44_12775_c1
390 Ga0495601_0008770
391 Ga0495619_0058688
392 Ga0500556_0000162
393 Ga0500600_0031378
394 Ga0500616_0004947
395 Ga0501084_0128687
396 Ga0501084_0156146
397 Ga0501084_0178123
398 Ga0501082_0009093
399 Ga0501082_0096769
400 2585317408
401 2616700999
402 2644093390
403 2644267484
404 2644323000
405 2644442130
406 2785346362
407 2785365808
408 2785372585
409 2793983172
410 2808847204
411 2808918013
412 2812360677
413 2852639521
414 2862383548
415 2863407380
416 2867477519
417 2939674142
418 2945941593
419 2946065217
420 2954381262
421 2954691855
422 2954706965
423 2990066488
424 2997455705
425 3006487699
426 8008560871
427 8025481639
428 8047903361
429 8048365952
430 8048379199
431 8048388305
432 8048407350
433 8054109304
434 8056830827

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

64

210

0.97

PF00005

ABC_tran

ABC transporter

308

464

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7o17-assembly1.cif.gz_B abc transporter nosdfy e154q, atp-bound in lipid nanodisc 0.9101 18 236
6cvl-assembly1.cif.gz_D crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein 0.9011 18 235
7ahd-assembly1.cif.gz_D opua (e190q) occluded 0.8977 19 235
8edw-assembly1.cif.gz_A cryo-em structure of human abca7 in bpl/ch nanodiscs 0.8973 17 236
4zir-assembly1.cif.gz_B crystal structure of ecfaa' heterodimer bound to amppnp 0.8963 19 236
ID Description Score Start End Superfamily
af_P04983_1_243_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9557 16 251 3.40.50.300
af_P0AAF3_1_241_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9523 13 248 3.40.50.300
af_P32721_2_243_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9488 16 249 3.40.50.300
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9338 17 249 3.40.50.300
af_P0AAF3_1_241_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9293 13 248 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1F6GQG0-F1-model_v4 ABC transporter domain-containing protein 0.9075 19 236 GO:0005524
GO:0016887
AF-A0A5F0MXG5-F1-model_v4 ABC transporter ATP-binding protein 0.9075 19 248 GO:0005524
GO:0016887
AF-A0A1G6BNS4-F1-model_v4 ABC-2 type transport system ATP-binding protein 0.9065 19 235 GO:0005524
GO:0016887
AF-A0A7C4JSP8-F1-model_v4 Gliding motility-associated ABC transporter ATP-binding subunit GldA 0.9037 19 236 GO:0005524
GO:0016887
AF-A0A0R2JNA6-F1-model_v4 ABC transporter domain-containing protein 0.9029 19 235 GO:0005524
GO:0016887

Map