F328920

General Info

Members Datasets Scaffolds Average Seq Length
217 159 434 430

Family's Representative Sequence

Representative Sequence 3300031711|Ga0265314_10049895|Ga0265314_100498952
Length 442
Sequence VFELPKYGDGVCLARMAALLDTLAIDRAWLQRHSVVVTGSNGKGSTAAFCAGLGKAHGLRTGLFTSPHLYRVNERFQVDGAAIGDDELARLAARVEAGIAEVSARLSQRFGAFEAMFALACLYFQESRCEFAVFEAGIGGRYDPVRLVGARFTCVTSVDYEHVELLGHTLELIVSDKSDACAAGGRIVYGENCLNLKPHLLEYNRHRDIAALFVRDQIEIGRETASASGQRFDYRFGQDDFRGLDIGLAGGFQFNNAAIAITLFLLWLRETQPQMKTAPTEAAIRSGLRETRWPGRLEVIDTHPLTVVDVGHTPDGIRRSLAGLRSVHGAREADDGWILVIGVSADKKADEIVGALAPSFATIICTAAHHKGADALIIAASVRRANSDAVVHVAETIEKAVGLSRTIATSRHMKIYVAGGLFLAIEYATVARGGRPADLKFF

Samples

Sample ID Description Type Environment
1 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
60 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
95 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
96 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
99 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
100 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
101 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
102 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
103 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
104 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
105 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
113 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
114 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
115 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
116 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
117 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
118 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
119 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
120 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
121 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
122 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
125 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
126 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
127 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
128 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
145 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
150 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
151 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
152 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
153 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
154 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
155 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
156 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
157 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
158 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
159 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.24
Metatranscriptomes 0
Isolates 2.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.23
Nodule 1.84
Rhizoplane 15.67
Rhizosphere 73.73
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265314_10049895 3300031711 Bacteria 2927
2 Ga0070676_10062045 3300005328 Bacteria 2223
3 Ga0070683_100199196 3300005329 Bacteria 1902
4 Ga0068869_100071955 3300005334 Bacteria 2561
5 Ga0068868_100029830 3300005338 Bacteria 4179
6 Ga0070689_100084573 3300005340 Bacteria 2494
7 Ga0070661_100042390 3300005344 Bacteria 3322
8 Ga0070674_100122935 3300005356 Bacteria 1924
9 Ga0070709_10001631 3300005434 Bacteria 12142
10 Ga0070714_100005009 3300005435 Bacteria 10069
11 Ga0070713_100017553 3300005436 Bacteria 5415
12 Ga0070710_10000455 3300005437 Bacteria 19180
13 Ga0070663_100058423 3300005455 Bacteria 2769
14 Ga0070678_100112301 3300005456 Bacteria 2134
15 Ga0070678_100148373 3300005456 Bacteria 1886
16 Ga0070662_100009942 3300005457 Bacteria 6231
17 Ga0070684_100085291 3300005535 Bacteria 2801
18 Ga0070697_100037785 3300005536 Bacteria 3900
19 Ga0068853_100053916 3300005539 Bacteria 3464
20 Ga0068853_100284136 3300005539 Bacteria 1526
21 Ga0070665_100021065 3300005548 Bacteria 6555
22 Ga0070665_100031802 3300005548 Bacteria 5311
23 Ga0070665_100064725 3300005548 Bacteria 3667
24 Ga0070665_100264098 3300005548 Bacteria 1723
25 Ga0070664_100077988 3300005564 Bacteria 2849
26 Ga0068854_100079935 3300005578 Bacteria 2412
27 Ga0068856_100068311 3300005614 Bacteria 3513
28 Ga0068852_100095810 3300005616 Bacteria 2666
29 Ga0068864_100113107 3300005618 Bacteria 2420
30 Ga0068861_100069393 3300005719 Bacteria 2727
31 Ga0068851_10041764 3300005834 Bacteria 2307
32 Ga0068858_100037245 3300005842 Bacteria 4510
33 Ga0068862_100173290 3300005844 Bacteria 1932
34 Ga0081540_1009831 3300005983 Bacteria 6543
35 Ga0081540_1012715 3300005983 Bacteria 5518
36 Ga0070717_10035360 3300006028 Bacteria 4043
37 Ga0070715_10005334 3300006163 Bacteria 4280
38 Ga0070716_100005090 3300006173 Bacteria 6344
39 Ga0070712_100052246 3300006175 Bacteria 2849
40 Ga0075367_10044800 3300006178 Bacteria 2594
41 Ga0097621_100062704 3300006237 Bacteria 3053
42 Ga0068871_100081850 3300006358 Bacteria 2676
43 Ga0075434_100253039 3300006871 Bacteria 1780
44 Ga0068865_100072749 3300006881 Bacteria 2443
45 Ga0099794_10006502 3300007265 Bacteria 4739
46 Ga0105240_10033694 3300009093 Bacteria 6614
47 Ga0105245_10010179 3300009098 Bacteria 8188
48 Ga0105245_10022706 3300009098 Bacteria 5506
49 Ga0105247_10028034 3300009101 Bacteria 3406
50 Ga0105247_10111880 3300009101 Bacteria 1758
51 Ga0105247_10126080 3300009101 Bacteria 1664
52 Ga0105243_10078862 3300009148 Bacteria 2683
53 Ga0105243_10183364 3300009148 Bacteria 1822
54 Ga0105241_10183748 3300009174 Bacteria 1736
55 Ga0105248_10050103 3300009177 Bacteria 4683
56 Ga0105237_10049174 3300009545 Bacteria 4239
57 Ga0105249_10111763 3300009553 Bacteria 2583
58 Ga0099796_10001884 3300010159 Bacteria 4431
59 Ga0105239_10018597 3300010375 Bacteria 7678
60 Ga0105239_10032474 3300010375 Bacteria 5735
61 Ga0105239_10060874 3300010375 Bacteria 4144
62 Ga0105239_10294585 3300010375 Bacteria 1827
63 Ga0105246_10031487 3300011119 Bacteria 3510
64 Ga0157369_10193593 3300013105 Bacteria 2136
65 Ga0157378_10119905 3300013297 Bacteria 2423
66 Ga0163162_10099415 3300013306 Bacteria 3000
67 Ga0157375_10114384 3300013308 Bacteria 2800
68 Ga0157375_10165897 3300013308 Bacteria 2353
69 Ga0163163_10006268 3300014325 Bacteria 10383
70 Ga0163163_10122686 3300014325 Bacteria 2633
71 Ga0157380_10137209 3300014326 Bacteria 2096
72 Ga0157379_10114668 3300014968 Bacteria 2422
73 Ga0157379_10124455 3300014968 Bacteria 2320
74 Ga0157376_10040099 3300014969 Bacteria 3825
75 Ga0209758_1011928 3300025297 Bacteria 4946
76 Ga0207692_10023421 3300025898 Bacteria 2855
77 Ga0207685_10045019 3300025905 Bacteria 1672
78 Ga0207699_10105505 3300025906 Bacteria 1797
79 Ga0207645_10110586 3300025907 Bacteria 1778
80 Ga0207643_10043235 3300025908 Bacteria 2542
81 Ga0207654_10016268 3300025911 Bacteria 3870
82 Ga0207693_10000982 3300025915 Bacteria 25565
83 Ga0207663_10000809 3300025916 Bacteria 14086
84 Ga0207657_10025987 3300025919 Bacteria 5389
85 Ga0207657_10032972 3300025919 Bacteria 4673
86 Ga0207687_10004623 3300025927 Bacteria 9155
87 Ga0207687_10051068 3300025927 Bacteria 2881
88 Ga0207700_10103599 3300025928 Bacteria 2275
89 Ga0207664_10041015 3300025929 Bacteria 3604
90 Ga0207706_10023227 3300025933 Bacteria 5569
91 Ga0207670_10190548 3300025936 Bacteria 1551
92 Ga0207669_10086033 3300025937 Bacteria 2031
93 Ga0207665_10001876 3300025939 Bacteria 14163
94 Ga0207691_10015151 3300025940 Bacteria 7336
95 Ga0207711_10082490 3300025941 Bacteria 2810
96 Ga0207689_10035134 3300025942 Bacteria 4164
97 Ga0207661_10188522 3300025944 Bacteria 1807
98 Ga0207661_10258217 3300025944 Bacteria 1551
99 Ga0207712_10024399 3300025961 Bacteria 4004
100 Ga0207668_10036828 3300025972 Bacteria 3269
101 Ga0207677_10010334 3300026023 Bacteria 5278
102 Ga0207677_10117821 3300026023 Bacteria 1991
103 Ga0207703_10032186 3300026035 Bacteria 4150
104 Ga0207639_10121222 3300026041 Bacteria 2149
105 Ga0207639_10183477 3300026041 Bacteria 1782
106 Ga0207678_10005107 3300026067 Bacteria 11771
107 Ga0207678_10008129 3300026067 Bacteria 9248
108 Ga0207702_10045927 3300026078 Bacteria 3676
109 Ga0207674_10016067 3300026116 Bacteria 8199
110 Ga0207674_10112337 3300026116 Bacteria 2698
111 Ga0207675_100077535 3300026118 Bacteria 3113
112 Ga0207675_100118118 3300026118 Bacteria 2507
113 Ga0207683_10028552 3300026121 Bacteria 4824
114 Ga0207683_10044989 3300026121 Bacteria 3860
115 Ga0207683_10048350 3300026121 Bacteria 3725
116 Ga0207698_10055357 3300026142 Bacteria 3057
117 Ga0207698_10070140 3300026142 Bacteria 2775
118 Ga0209588_1000805 3300027671 Bacteria 7967
119 Ga0268266_10003251 3300028379 Bacteria 16379
120 Ga0268266_10006678 3300028379 Bacteria 10524
121 Ga0268266_10009448 3300028379 Bacteria 8583
122 Ga0268266_10187197 3300028379 Bacteria 1888
123 Ga0268266_10209703 3300028379 Bacteria 1786
124 Ga0268265_10132308 3300028380 Bacteria 2075
125 Ga0268265_10203756 3300028380 Bacteria 1718
126 Ga0268265_10219199 3300028380 Bacteria 1663
127 Ga0307517_10064989 3300028786 Bacteria 3384
128 Ga0265339_10005471 3300031249 Bacteria 8460
129 Ga0307509_10084301 3300031507 Bacteria 3274
130 Ga0265314_10008860 3300031711 Bacteria 8589
131 Ga0307516_10014199 3300031730 Bacteria 8438
132 Ga0307516_10140830 3300031730 Bacteria 2182
133 Ga0307510_10008629 3300033180 Bacteria 12145
134 Ga0373953_0064911 3300035117 Bacteria 1498
135 Ga0373954_0044192 3300035118 Bacteria 2078
136 Ga0373955_0023944 3300035172 Bacteria 3116
137 Ga0373931_0003246 3300035691 Bacteria 7266
138 Ga0373935_0144045 3300035692 Bacteria 1612
139 Ga0373927_0032840 3300035695 Bacteria 3379
140 Ga0373933_0064446 3300035724 Bacteria 2217
141 Ga0373937_0144070 3300036401 Bacteria 2230
142 Ga0373925_0132249 3300037068 Bacteria 1947
143 Ga0395898_0100294 3300037466 Bacteria 2781
144 Ga0395901_0192870 3300038443 Bacteria 2136
145 Ga0466969_0077958 3300044656 Bacteria 1585
146 Ga0466967_0014922 3300045976 Bacteria 6075
147 Ga0495603_0019483 3300046455 Bacteria 4106
148 Ga0495629_0087921 3300046459 Bacteria 2168
149 Ga0495638_0034296 3300046460 Bacteria 3240
150 Ga0495651_0020459 3300046462 Bacteria 5138
151 Ga0495664_0052951 3300046477 Bacteria 2413
152 Ga0495583_0041399 3300046506 Bacteria 2158
153 Ga0495632_0039510 3300046519 Bacteria 2381
154 Ga0495648_0001509 3300046524 Bacteria 22791
155 Ga0495666_0071133 3300046526 Bacteria 1654
156 Ga0495640_0023914 3300046533 Bacteria 4444
157 Ga0495640_0038046 3300046533 Bacteria 3387
158 Ga0495598_0026084 3300046537 Bacteria 1599
159 Ga0495645_0123936 3300046543 Bacteria 1817
160 Ga0495646_0024295 3300046680 Bacteria 3817
161 Ga0495669_0012368 3300046684 Bacteria 3632
162 Ga0495669_0079330 3300046684 Bacteria 1505
163 Ga0495600_0063020 3300046809 Bacteria 2423
164 Ga0495676_0055506 3300047321 Bacteria 3140
165 Ga0495593_0098987 3300047673 Bacteria 1497
166 Ga0495602_0093672 3300048088 Bacteria 2485
167 Ga0496101_0010968 3300048904 Bacteria 6002
168 Ga0496101_0048580 3300048904 Bacteria 3050
169 Ga0496102_0034581 3300048905 Bacteria 4545
170 Ga0496102_0041959 3300048905 Bacteria 4145
171 Ga0496102_0073826 3300048905 Bacteria 3135
172 Ga0496102_0086757 3300048905 Bacteria 2891
173 Ga0496103_0054880 3300048906 Bacteria 2470
174 Ga0496104_0022806 3300048907 Bacteria 5751
175 Ga0496104_0028127 3300048907 Bacteria 5209
176 Ga0496105_0046516 3300048908 Bacteria 3581
177 Ga0496106_0003264 3300048909 Bacteria 12132
178 Ga0496107_0059468 3300048910 Bacteria 2765
179 Ga0496107_0067602 3300048910 Bacteria 2593
180 Ga0496108_0000507 3300048911 Bacteria 30629
181 Ga0496108_0011420 3300048911 Bacteria 7220
182 Ga0496108_0043193 3300048911 Bacteria 3765
183 Ga0496108_0048301 3300048911 Bacteria 3558
184 Ga0496109_0005693 3300048912 Bacteria 10431
185 Ga0496109_0012463 3300048912 Bacteria 7340
186 Ga0496110_0024145 3300048913 Bacteria 5178
187 Ga0496111_0013399 3300048914 Bacteria 5578
188 Ga0496112_0003626 3300048915 Bacteria 12859
189 Ga0496112_0004609 3300048915 Bacteria 11727
190 Ga0496112_0005258 3300048915 Bacteria 11150
191 Ga0496112_0052776 3300048915 Bacteria 3991
192 Ga0496112_0136241 3300048915 Bacteria 2425
193 Ga0496112_0163821 3300048915 Bacteria 2189
194 Ga0496113_0012935 3300048916 Bacteria 5629
195 Ga0496113_0018506 3300048916 Bacteria 4854
196 Ga0496113_0108002 3300048916 Bacteria 2163
197 Ga0496114_0004374 3300048917 Bacteria 10944
198 Ga0496114_0048148 3300048917 Bacteria 3546
199 Ga0496114_0130721 3300048917 Bacteria 2168
200 Ga0496115_0029185 3300048918 Bacteria 4330
201 Ga0496118_0145301 3300048921 Bacteria 1495
202 Ga0496121_0038446 3300048924 Bacteria 4238
203 Ga0496126_0002247 3300048929 Bacteria 26660
204 Ga0496126_0045103 3300048929 Bacteria 4054
205 Ga0496126_0158792 3300048929 Bacteria 1933
206 Ga0501038_0129959 3300049574 Bacteria 2069
207 nmdc:mga03n38_20008_c1 3300050490 Bacteria 2671
208 nmdc:mga0yw44_25945_c1 3300050492 Bacteria 3340
209 nmdc:mga06z11_14860_c1 3300050494 Bacteria 3460
210 Ga0500595_002410 3300053119 Bacteria 9331
211 Ga0500636_0003568 3300053177 Bacteria 8768
212 2723849249 2721755755 Bacteria 8322773
213 2876813463 2876808645 Bacteria 8824342
214 2879112699 2879110137 Bacteria 8907982
215 2922364441 2922361189 Bacteria 7436256
216 8006992549 8006984368 Bacteria 9651211
217 8056678499 8056673599 Bacteria 7871253
218 Ga0265314_10049895
219 Ga0070676_10062045
220 Ga0070683_100199196
221 Ga0068869_100071955
222 Ga0068868_100029830
223 Ga0070689_100084573
224 Ga0070661_100042390
225 Ga0070674_100122935
226 Ga0070709_10001631
227 Ga0070714_100005009
228 Ga0070713_100017553
229 Ga0070710_10000455
230 Ga0070663_100058423
231 Ga0070678_100112301
232 Ga0070678_100148373
233 Ga0070662_100009942
234 Ga0070684_100085291
235 Ga0070697_100037785
236 Ga0068853_100053916
237 Ga0068853_100284136
238 Ga0070665_100021065
239 Ga0070665_100031802
240 Ga0070665_100064725
241 Ga0070665_100264098
242 Ga0070664_100077988
243 Ga0068854_100079935
244 Ga0068856_100068311
245 Ga0068852_100095810
246 Ga0068864_100113107
247 Ga0068861_100069393
248 Ga0068851_10041764
249 Ga0068858_100037245
250 Ga0068862_100173290
251 Ga0081540_1009831
252 Ga0081540_1012715
253 Ga0070717_10035360
254 Ga0070715_10005334
255 Ga0070716_100005090
256 Ga0070712_100052246
257 Ga0075367_10044800
258 Ga0097621_100062704
259 Ga0068871_100081850
260 Ga0075434_100253039
261 Ga0068865_100072749
262 Ga0099794_10006502
263 Ga0105240_10033694
264 Ga0105245_10010179
265 Ga0105245_10022706
266 Ga0105247_10028034
267 Ga0105247_10111880
268 Ga0105247_10126080
269 Ga0105243_10078862
270 Ga0105243_10183364
271 Ga0105241_10183748
272 Ga0105248_10050103
273 Ga0105237_10049174
274 Ga0105249_10111763
275 Ga0099796_10001884
276 Ga0105239_10018597
277 Ga0105239_10032474
278 Ga0105239_10060874
279 Ga0105239_10294585
280 Ga0105246_10031487
281 Ga0157369_10193593
282 Ga0157378_10119905
283 Ga0163162_10099415
284 Ga0157375_10114384
285 Ga0157375_10165897
286 Ga0163163_10006268
287 Ga0163163_10122686
288 Ga0157380_10137209
289 Ga0157379_10114668
290 Ga0157379_10124455
291 Ga0157376_10040099
292 Ga0209758_1011928
293 Ga0207692_10023421
294 Ga0207685_10045019
295 Ga0207699_10105505
296 Ga0207645_10110586
297 Ga0207643_10043235
298 Ga0207654_10016268
299 Ga0207693_10000982
300 Ga0207663_10000809
301 Ga0207657_10025987
302 Ga0207657_10032972
303 Ga0207687_10004623
304 Ga0207687_10051068
305 Ga0207700_10103599
306 Ga0207664_10041015
307 Ga0207706_10023227
308 Ga0207670_10190548
309 Ga0207669_10086033
310 Ga0207665_10001876
311 Ga0207691_10015151
312 Ga0207711_10082490
313 Ga0207689_10035134
314 Ga0207661_10188522
315 Ga0207661_10258217
316 Ga0207712_10024399
317 Ga0207668_10036828
318 Ga0207677_10010334
319 Ga0207677_10117821
320 Ga0207703_10032186
321 Ga0207639_10121222
322 Ga0207639_10183477
323 Ga0207678_10005107
324 Ga0207678_10008129
325 Ga0207702_10045927
326 Ga0207674_10016067
327 Ga0207674_10112337
328 Ga0207675_100077535
329 Ga0207675_100118118
330 Ga0207683_10028552
331 Ga0207683_10044989
332 Ga0207683_10048350
333 Ga0207698_10055357
334 Ga0207698_10070140
335 Ga0209588_1000805
336 Ga0268266_10003251
337 Ga0268266_10006678
338 Ga0268266_10009448
339 Ga0268266_10187197
340 Ga0268266_10209703
341 Ga0268265_10132308
342 Ga0268265_10203756
343 Ga0268265_10219199
344 Ga0307517_10064989
345 Ga0265339_10005471
346 Ga0307509_10084301
347 Ga0265314_10008860
348 Ga0307516_10014199
349 Ga0307516_10140830
350 Ga0307510_10008629
351 Ga0373953_0064911
352 Ga0373954_0044192
353 Ga0373955_0023944
354 Ga0373931_0003246
355 Ga0373935_0144045
356 Ga0373927_0032840
357 Ga0373933_0064446
358 Ga0373937_0144070
359 Ga0373925_0132249
360 Ga0395898_0100294
361 Ga0395901_0192870
362 Ga0466969_0077958
363 Ga0466967_0014922
364 Ga0495603_0019483
365 Ga0495629_0087921
366 Ga0495638_0034296
367 Ga0495651_0020459
368 Ga0495664_0052951
369 Ga0495583_0041399
370 Ga0495632_0039510
371 Ga0495648_0001509
372 Ga0495666_0071133
373 Ga0495640_0023914
374 Ga0495640_0038046
375 Ga0495598_0026084
376 Ga0495645_0123936
377 Ga0495646_0024295
378 Ga0495669_0012368
379 Ga0495669_0079330
380 Ga0495600_0063020
381 Ga0495676_0055506
382 Ga0495593_0098987
383 Ga0495602_0093672
384 Ga0496101_0010968
385 Ga0496101_0048580
386 Ga0496102_0034581
387 Ga0496102_0041959
388 Ga0496102_0073826
389 Ga0496102_0086757
390 Ga0496103_0054880
391 Ga0496104_0022806
392 Ga0496104_0028127
393 Ga0496105_0046516
394 Ga0496106_0003264
395 Ga0496107_0059468
396 Ga0496107_0067602
397 Ga0496108_0000507
398 Ga0496108_0011420
399 Ga0496108_0043193
400 Ga0496108_0048301
401 Ga0496109_0005693
402 Ga0496109_0012463
403 Ga0496110_0024145
404 Ga0496111_0013399
405 Ga0496112_0003626
406 Ga0496112_0004609
407 Ga0496112_0005258
408 Ga0496112_0052776
409 Ga0496112_0136241
410 Ga0496112_0163821
411 Ga0496113_0012935
412 Ga0496113_0018506
413 Ga0496113_0108002
414 Ga0496114_0004374
415 Ga0496114_0048148
416 Ga0496114_0130721
417 Ga0496115_0029185
418 Ga0496118_0145301
419 Ga0496121_0038446
420 Ga0496126_0002247
421 Ga0496126_0045103
422 Ga0496126_0158792
423 Ga0501038_0129959
424 nmdc:mga03n38_20008_c1
425 nmdc:mga0yw44_25945_c1
426 nmdc:mga06z11_14860_c1
427 Ga0500595_002410
428 Ga0500636_0003568
429 2723849249
430 2876813463
431 2879112699
432 2922364441
433 8006992549
434 8056678499

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

295

419

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1w78-assembly1.cif.gz_A e.coli folc in complex with dhpp and adp 0.8889 15 426
1w7k-assembly1.cif.gz_A e.coli folc in complex with adp, without folate substrate 0.8869 13 426
3n2a-assembly1.cif.gz_A crystal structure of bifunctional folylpolyglutamate synthase/dihydrofolate synthase from yersinia pestis co92 0.8758 13 426
1fgs-assembly1.cif.gz_A folylpolyglutamate synthetase from lactobacillus casei 0.8748 15 426
3qcz-assembly1.cif.gz_A crystal structure of bifunctional folylpolyglutamate synthase/dihydrofolate synthase with mn, amppnp and l-glutamate bound 0.874 13 426
ID Description Score Start End Superfamily
1fgsA01 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8838 15 292 3.40.1190.10
1o5zA01 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8757 13 292 3.40.1190.10
af_Q9UTD0_1_272_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8575 13 292 3.40.1190.10
af_Q2FXR9_1_294_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8507 15 292 3.40.1190.10
af_Q2FXR9_295_421_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.8462 293 421 3.90.190.20
ID Description Score Start End GO Terms
AF-A0A7X6WF23-F1-model_v4 Bifunctional folylpolyglutamate synthase/dihydrofolate synthase 0.9277 13 137 GO:0004326
GO:0005524
GO:0005737
GO:0008841
AF-A0A6M0F7W4-F1-model_v4 tetrahydrofolate synthase (EC 6.3.2.17) (Tetrahydrofolylpolyglutamate synthase) 0.9256 3 436 GO:0004326
GO:0005524
GO:0005737
GO:0008841
GO:0046872
AF-A0A6M0F7W4-F1-model_v4 tetrahydrofolate synthase (EC 6.3.2.17) (Tetrahydrofolylpolyglutamate synthase) 0.9195 3 436 GO:0004326
GO:0005524
GO:0005737
GO:0008841
GO:0046872
AF-A0A7V6B5J0-F1-model_v4 tetrahydrofolate synthase (EC 6.3.2.17) (Tetrahydrofolylpolyglutamate synthase) 0.9183 13 426 GO:0004326
GO:0005524
GO:0005737
GO:0008841
GO:0046654
GO:0046872
AF-A0A2N2HPL4-F1-model_v4 tetrahydrofolate synthase (EC 6.3.2.17) (Tetrahydrofolylpolyglutamate synthase) 0.9159 13 426 GO:0004326
GO:0005524
GO:0005737
GO:0008841
GO:0046654
GO:0046872

Map