F327749

General Info

Members Datasets Scaffolds Average Seq Length
216 163 432 280

Family's Representative Sequence

Representative Sequence 3300031852|Ga0307410_10194988|Ga0307410_101949883
Length 322
Sequence MRYACIQRHRGEFEVLLMCRVLEVTRSGFYAWLKSVPSARARTDERLRAEVRAIHKMSRGDYGSPRVHAALQKRGERVSRKRVARLMGEEGLRGKKRRRFVVTTNSNHTYPTAPNVLDRKFAVEEIDGPDQVWAADITYVPTREGWLYLAIVLDLASRLVVGWSMGETLESSLAIDALEMALQRRRPAAGLLHHSDRGVQYASNDYRALLEGKQAIASMSRKGNCWDNAVAESFFATVEVELIQDEDWHTRNEARVAIFDFIEVWYNRQRIHSSLGYLTPAEFDKRLREAGRAPRGGAACFPLTRCPRKWGNSNSVDSVDSV

Samples

Sample ID Description Type Environment
1 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
73 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
74 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
81 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
87 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
89 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
90 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
91 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
92 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
95 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
96 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
98 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
108 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
111 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
112 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
113 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
119 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
120 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
121 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
122 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
126 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
129 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
130 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
131 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
132 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
133 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
134 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
135 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
136 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
139 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
142 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
143 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
152 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
153 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
154 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
155 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
156 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
161 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
162 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
163 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.93
Rhizosphere 98.15
Stem 0
Stem Tuber 0
Unclassified 6.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307410_10194988 3300031852 Bacteria 1542
2 JGI25404J52841_10024134 3300003659 Bacteria 1311
3 Ga0070658_10263763 3300005327 Bacteria 1463
4 Ga0070676_10129282 3300005328 Bacteria 1595
5 Ga0070683_100125896 3300005329 Bacteria 2422
6 Ga0070677_10148219 3300005333 Bacteria 1089
7 Ga0070680_100201390 3300005336 Bacteria 1679
8 Ga0070660_100264339 3300005339 Bacteria 1405
9 Ga0070691_10092839 3300005341 Bacteria 1490
10 Ga0070687_100283562 3300005343 Bacteria 1044
11 Ga0070692_10076155 3300005345 Bacteria 1798
12 Ga0070659_100145178 3300005366 Bacteria 1933
13 Ga0070711_100132941 3300005439 Bacteria 1855
14 Ga0070708_100098386 3300005445 Bacteria 2675
15 Ga0070681_10019487 3300005458 Bacteria 6791
16 Ga0068867_100175303 3300005459 Bacteria 1701
17 Ga0070707_100274476 3300005468 Bacteria 1639
18 Ga0070707_100536219 3300005468 Bacteria 1132
19 Ga0070679_100174371 3300005530 Bacteria 2123
20 Ga0070679_100662007 3300005530 Bacteria 987
21 Ga0070684_100160983 3300005535 Bacteria 2036
22 Ga0070686_100243915 3300005544 Bacteria 1309
23 Ga0070686_100266966 3300005544 Unclassified 1257
24 Ga0068855_100020996 3300005563 Bacteria 7831
25 Ga0068855_100224811 3300005563 Bacteria 2104
26 Ga0068857_100120041 3300005577 Bacteria 2366
27 Ga0068857_100195765 3300005577 Bacteria 1842
28 Ga0068854_100068681 3300005578 Bacteria 2585
29 Ga0068854_100189010 3300005578 Bacteria 1613
30 Ga0068852_100391000 3300005616 Bacteria 1366
31 Ga0068859_100296500 3300005617 Bacteria 1710
32 Ga0068861_100276500 3300005719 Bacteria 1444
33 Ga0068851_10262369 3300005834 Bacteria 983
34 Ga0081455_10048859 3300005937 Bacteria 3651
35 Ga0081540_1021807 3300005983 Bacteria 3800
36 Ga0070717_10172064 3300006028 Bacteria 1884
37 Ga0070716_100138023 3300006173 Unclassified 1551
38 Ga0075434_100244085 3300006871 Unclassified 1816
39 Ga0097620_100296524 3300006931 Bacteria 1710
40 Ga0075435_100436679 3300007076 Unclassified 1128
41 Ga0105240_10649542 3300009093 Bacteria 1156
42 Ga0114129_10496026 3300009147 Bacteria 1595
43 Ga0105242_10323925 3300009176 Bacteria 1414
44 Ga0105248_10453129 3300009177 Bacteria 1446
45 Ga0105237_10011404 3300009545 Bacteria 9403
46 Ga0105238_10109558 3300009551 Bacteria 2743
47 Ga0105238_10467284 3300009551 Bacteria 1260
48 Ga0105239_10447849 3300010375 Bacteria 1464
49 Ga0157369_10184182 3300013105 Bacteria 2196
50 Ga0157374_10293910 3300013296 Bacteria 1606
51 Ga0157378_10546784 3300013297 Unclassified 1163
52 Ga0157372_10310409 3300013307 Bacteria 1836
53 Ga0157372_10440544 3300013307 Bacteria 1518
54 Ga0213876_10134389 3300021384 Bacteria 1315
55 Ga0207645_10134656 3300025907 Bacteria 1609
56 Ga0207705_10013465 3300025909 Bacteria 5901
57 Ga0207684_10294777 3300025910 Unclassified 1398
58 Ga0207695_10037528 3300025913 Bacteria 5227
59 Ga0207671_10014933 3300025914 Bacteria 6105
60 Ga0207693_10170991 3300025915 Bacteria 1711
61 Ga0207663_10203734 3300025916 Bacteria 1429
62 Ga0207660_10257575 3300025917 Bacteria 1379
63 Ga0207662_10263018 3300025918 Bacteria 1136
64 Ga0207657_10230340 3300025919 Bacteria 1482
65 Ga0207652_10326957 3300025921 Bacteria 1384
66 Ga0207646_10241868 3300025922 Bacteria 1630
67 Ga0207694_10208105 3300025924 Bacteria 1593
68 Ga0207694_10489096 3300025924 Bacteria 1030
69 Ga0207700_10074575 3300025928 Bacteria 2625
70 Ga0207644_10221082 3300025931 Bacteria 1501
71 Ga0207690_10246567 3300025932 Bacteria 1378
72 Ga0207686_10282391 3300025934 Bacteria 1226
73 Ga0207670_10258292 3300025936 Bacteria 1349
74 Ga0207665_10265904 3300025939 Bacteria 1272
75 Ga0207691_10093538 3300025940 Bacteria 2691
76 Ga0207667_10017096 3300025949 Bacteria 8178
77 Ga0207640_10181875 3300025981 Bacteria 1577
78 Ga0207640_10263632 3300025981 Bacteria 1344
79 Ga0207708_10354902 3300026075 Bacteria 1204
80 Ga0207674_10137398 3300026116 Bacteria 2405
81 Ga0207674_10286844 3300026116 Bacteria 1594
82 Ga0207675_100328996 3300026118 Bacteria 1493
83 Ga0265323_10060280 3300028653 Bacteria 1321
84 Ga0265330_10081723 3300031235 Bacteria 1391
85 Ga0265329_10044684 3300031242 Bacteria 1416
86 Ga0307408_100135812 3300031548 Bacteria 1924
87 Ga0265342_10062546 3300031712 Bacteria 2190
88 Ga0307405_10174487 3300031731 Unclassified 1537
89 Ga0307405_10374471 3300031731 Bacteria 1106
90 Ga0307413_10200778 3300031824 Bacteria 1440
91 Ga0307410_10167726 3300031852 Unclassified 1651
92 Ga0307406_10095135 3300031901 Bacteria 2015
93 Ga0307407_10182008 3300031903 Bacteria 1393
94 Ga0307412_10211257 3300031911 Bacteria 1481
95 Ga0307412_10482726 3300031911 Bacteria 1028
96 Ga0307409_100405441 3300031995 Bacteria 1303
97 Ga0307416_100261265 3300032002 Bacteria 1692
98 Ga0307416_100307623 3300032002 Bacteria 1579
99 Ga0307416_100331025 3300032002 Bacteria 1530
100 Ga0307416_100342089 3300032002 Bacteria 1509
101 Ga0307416_100467182 3300032002 Bacteria 1318
102 Ga0307416_100721576 3300032002 Bacteria 1087
103 Ga0307414_10381939 3300032004 Bacteria 1218
104 Ga0307415_100096557 3300032126 Bacteria 2154
105 Ga0307415_100313176 3300032126 Bacteria 1305
106 Ga0307415_100326090 3300032126 Bacteria 1282
107 Ga0373934_0050157 3300035086 Bacteria 1653
108 Ga0373934_0065051 3300035086 Bacteria 1456
109 Ga0373923_0043581 3300035111 Bacteria 1857
110 Ga0373936_0061072 3300035113 Bacteria 1538
111 Ga0373953_0027161 3300035117 Bacteria 2197
112 Ga0373953_0043060 3300035117 Bacteria 1801
113 Ga0373954_0030518 3300035118 Bacteria 2485
114 Ga0373956_0049238 3300035119 Bacteria 1889
115 Ga0373957_0034254 3300035120 Bacteria 1879
116 Ga0373955_0020493 3300035172 Bacteria 3325
117 Ga0316574_0205516 3300035398 Unclassified 1264
118 Ga0373924_0035270 3300035410 Bacteria 2028
119 Ga0373935_0054156 3300035692 Bacteria 2553
120 Ga0373927_0067762 3300035695 Bacteria 2309
121 Ga0373933_0037373 3300035724 Bacteria 2848
122 Ga0373937_0011123 3300036401 Bacteria 7887
123 Ga0373937_0149873 3300036401 Bacteria 2184
124 Ga0373937_0251580 3300036401 Bacteria 1666
125 Ga0316584_0495533 3300036712 Unclassified 859
126 Ga0395899_0112823 3300037312 Bacteria 1953
127 Ga0395900_0180650 3300037418 Bacteria 2144
128 Ga0395900_0285697 3300037418 Bacteria 1640
129 Ga0395898_0362787 3300037466 Bacteria 1381
130 Ga0395905_0192872 3300037471 Bacteria 1911
131 Ga0395905_0387867 3300037471 Bacteria 1291
132 Ga0395901_0006053 3300038443 Bacteria 12256
133 Ga0395901_0185889 3300038443 Bacteria 2179
134 Ga0395901_0373053 3300038443 Bacteria 1469
135 Ga0436365_1066332 3300039437 Bacteria 1732
136 Ga0450906_014776 3300042145 Bacteria 1427
137 Ga0439446_0069617 3300042156 Bacteria 1074
138 Ga0451577_0254547 3300042876 Bacteria 1589
139 Ga0453683_0179805 3300044673 Bacteria 1341
140 Ga0466965_0115584 3300044683 Bacteria 1382
141 Ga0466961_0197112 3300044693 Bacteria 1246
142 Ga0466957_0153812 3300044842 Bacteria 1489
143 Ga0451576_0367630 3300045051 Bacteria 1507
144 Ga0466967_0559078 3300045976 Bacteria 1126
145 Ga0495592_0051679 3300046454 Bacteria 3052
146 Ga0495592_0089731 3300046454 Bacteria 2207
147 Ga0495651_0003315 3300046462 Bacteria 12362
148 Ga0495639_0079068 3300046475 Bacteria 1529
149 Ga0495664_0013212 3300046477 Bacteria 4683
150 Ga0495606_0111622 3300046507 Bacteria 1648
151 Ga0495608_0182233 3300046511 Bacteria 1328
152 Ga0495608_0188873 3300046511 Bacteria 1301
153 Ga0495618_0170335 3300046514 Bacteria 1386
154 Ga0495618_0177920 3300046514 Bacteria 1352
155 Ga0495628_0034360 3300046516 Unclassified 4078
156 Ga0495628_0205578 3300046516 Bacteria 1482
157 Ga0495652_0027735 3300046529 Bacteria 4988
158 Ga0495665_0138333 3300046531 Unclassified 1273
159 Ga0495586_0239264 3300046535 Bacteria 1034
160 Ga0495587_0059040 3300046536 Bacteria 2252
161 Ga0495587_0073494 3300046536 Bacteria 1986
162 Ga0495587_0125392 3300046536 Bacteria 1469
163 Ga0495645_0009189 3300046543 Bacteria 6907
164 Ga0495645_0153641 3300046543 Bacteria 1597
165 Ga0495645_0307079 3300046543 Bacteria 1034
166 Ga0495667_0069770 3300046559 Bacteria 2294
167 Ga0495667_0118544 3300046559 Bacteria 1709
168 Ga0495667_0157636 3300046559 Bacteria 1460
169 Ga0495656_0089579 3300046615 Bacteria 1404
170 Ga0495634_0224480 3300046642 Bacteria 1158
171 Ga0495657_0104077 3300046675 Bacteria 1805
172 Ga0495657_0166221 3300046675 Bacteria 1362
173 Ga0495599_0004083 3300046678 Bacteria 8608
174 Ga0495599_0225782 3300046678 Bacteria 1144
175 Ga0495599_0230489 3300046678 Bacteria 1131
176 Ga0495623_0005952 3300046679 Bacteria 7948
177 Ga0495623_0146945 3300046679 Bacteria 1397
178 Ga0495623_0148855 3300046679 Bacteria 1385
179 Ga0495646_0115246 3300046680 Bacteria 1526
180 Ga0495600_0085774 3300046809 Bacteria 2054
181 Ga0495600_0195625 3300046809 Bacteria 1299
182 Ga0495604_0064682 3300047317 Bacteria 2786
183 Ga0495680_0163233 3300047322 Bacteria 1616
184 Ga0495680_0207785 3300047322 Bacteria 1402
185 Ga0495680_0214498 3300047322 Bacteria 1376
186 Ga0495675_0184857 3300047444 Bacteria 1274
187 Ga0495684_0014164 3300047471 Bacteria 6135
188 Ga0495684_0036215 3300047471 Bacteria 3784
189 Ga0495602_0064940 3300048088 Bacteria 3153
190 Ga0495615_0022752 3300048090 Bacteria 1429
191 Ga0496100_0405365 3300048903 Bacteria 1039
192 Ga0496105_0419536 3300048908 Bacteria 1060
193 Ga0501032_0024836 3300049569 Bacteria 4134
194 Ga0501034_0190850 3300049571 Unclassified 2011
195 Ga0501036_0038325 3300049572 Bacteria 4056
196 Ga0501038_0046366 3300049574 Bacteria 3768
197 Ga0501039_0530287 3300049575 Bacteria 924
198 Ga0501043_0018808 3300049579 Bacteria 5422
199 Ga0501076_0294200 3300049592 Bacteria 1330
200 Ga0501239_004952 3300049672 Bacteria 1328
201 Ga0501249_026406 3300049679 Bacteria 1283
202 Ga0501259_049189 3300049688 Bacteria 851
203 Ga0501225_0031517 3300049705 Bacteria 1458
204 Ga0501268_017171 3300049765 Bacteria 1205
205 Ga0501035_0037219 3300049822 Bacteria 4407
206 Ga0501044_0151577 3300049823 Bacteria 2300
207 nmdc:mga05p37_562917_c1 3300050507 Bacteria 1295
208 nmdc:mga0n895_163537_c1 3300050512 Bacteria 2257
209 Ga0495601_0104682 3300053077 Bacteria 1829
210 Ga0495601_0154708 3300053077 Bacteria 1497
211 Ga0495601_0159876 3300053077 Bacteria 1472
212 Ga0495595_0066031 3300053084 Bacteria 1702
213 Ga0495595_0091398 3300053084 Bacteria 1460
214 Ga0495619_0124512 3300053085 Bacteria 1768
215 Ga0495619_0206078 3300053085 Bacteria 1361
216 Ga0495619_0209636 3300053085 Bacteria 1349
217 Ga0307410_10194988
218 JGI25404J52841_10024134
219 Ga0070658_10263763
220 Ga0070676_10129282
221 Ga0070683_100125896
222 Ga0070677_10148219
223 Ga0070680_100201390
224 Ga0070660_100264339
225 Ga0070691_10092839
226 Ga0070687_100283562
227 Ga0070692_10076155
228 Ga0070659_100145178
229 Ga0070711_100132941
230 Ga0070708_100098386
231 Ga0070681_10019487
232 Ga0068867_100175303
233 Ga0070707_100274476
234 Ga0070707_100536219
235 Ga0070679_100174371
236 Ga0070679_100662007
237 Ga0070684_100160983
238 Ga0070686_100243915
239 Ga0070686_100266966
240 Ga0068855_100020996
241 Ga0068855_100224811
242 Ga0068857_100120041
243 Ga0068857_100195765
244 Ga0068854_100068681
245 Ga0068854_100189010
246 Ga0068852_100391000
247 Ga0068859_100296500
248 Ga0068861_100276500
249 Ga0068851_10262369
250 Ga0081455_10048859
251 Ga0081540_1021807
252 Ga0070717_10172064
253 Ga0070716_100138023
254 Ga0075434_100244085
255 Ga0097620_100296524
256 Ga0075435_100436679
257 Ga0105240_10649542
258 Ga0114129_10496026
259 Ga0105242_10323925
260 Ga0105248_10453129
261 Ga0105237_10011404
262 Ga0105238_10109558
263 Ga0105238_10467284
264 Ga0105239_10447849
265 Ga0157369_10184182
266 Ga0157374_10293910
267 Ga0157378_10546784
268 Ga0157372_10310409
269 Ga0157372_10440544
270 Ga0213876_10134389
271 Ga0207645_10134656
272 Ga0207705_10013465
273 Ga0207684_10294777
274 Ga0207695_10037528
275 Ga0207671_10014933
276 Ga0207693_10170991
277 Ga0207663_10203734
278 Ga0207660_10257575
279 Ga0207662_10263018
280 Ga0207657_10230340
281 Ga0207652_10326957
282 Ga0207646_10241868
283 Ga0207694_10208105
284 Ga0207694_10489096
285 Ga0207700_10074575
286 Ga0207644_10221082
287 Ga0207690_10246567
288 Ga0207686_10282391
289 Ga0207670_10258292
290 Ga0207665_10265904
291 Ga0207691_10093538
292 Ga0207667_10017096
293 Ga0207640_10181875
294 Ga0207640_10263632
295 Ga0207708_10354902
296 Ga0207674_10137398
297 Ga0207674_10286844
298 Ga0207675_100328996
299 Ga0265323_10060280
300 Ga0265330_10081723
301 Ga0265329_10044684
302 Ga0307408_100135812
303 Ga0265342_10062546
304 Ga0307405_10174487
305 Ga0307405_10374471
306 Ga0307413_10200778
307 Ga0307410_10167726
308 Ga0307406_10095135
309 Ga0307407_10182008
310 Ga0307412_10211257
311 Ga0307412_10482726
312 Ga0307409_100405441
313 Ga0307416_100261265
314 Ga0307416_100307623
315 Ga0307416_100331025
316 Ga0307416_100342089
317 Ga0307416_100467182
318 Ga0307416_100721576
319 Ga0307414_10381939
320 Ga0307415_100096557
321 Ga0307415_100313176
322 Ga0307415_100326090
323 Ga0373934_0050157
324 Ga0373934_0065051
325 Ga0373923_0043581
326 Ga0373936_0061072
327 Ga0373953_0027161
328 Ga0373953_0043060
329 Ga0373954_0030518
330 Ga0373956_0049238
331 Ga0373957_0034254
332 Ga0373955_0020493
333 Ga0316574_0205516
334 Ga0373924_0035270
335 Ga0373935_0054156
336 Ga0373927_0067762
337 Ga0373933_0037373
338 Ga0373937_0011123
339 Ga0373937_0149873
340 Ga0373937_0251580
341 Ga0316584_0495533
342 Ga0395899_0112823
343 Ga0395900_0180650
344 Ga0395900_0285697
345 Ga0395898_0362787
346 Ga0395905_0192872
347 Ga0395905_0387867
348 Ga0395901_0006053
349 Ga0395901_0185889
350 Ga0395901_0373053
351 Ga0436365_1066332
352 Ga0450906_014776
353 Ga0439446_0069617
354 Ga0451577_0254547
355 Ga0453683_0179805
356 Ga0466965_0115584
357 Ga0466961_0197112
358 Ga0466957_0153812
359 Ga0451576_0367630
360 Ga0466967_0559078
361 Ga0495592_0051679
362 Ga0495592_0089731
363 Ga0495651_0003315
364 Ga0495639_0079068
365 Ga0495664_0013212
366 Ga0495606_0111622
367 Ga0495608_0182233
368 Ga0495608_0188873
369 Ga0495618_0170335
370 Ga0495618_0177920
371 Ga0495628_0034360
372 Ga0495628_0205578
373 Ga0495652_0027735
374 Ga0495665_0138333
375 Ga0495586_0239264
376 Ga0495587_0059040
377 Ga0495587_0073494
378 Ga0495587_0125392
379 Ga0495645_0009189
380 Ga0495645_0153641
381 Ga0495645_0307079
382 Ga0495667_0069770
383 Ga0495667_0118544
384 Ga0495667_0157636
385 Ga0495656_0089579
386 Ga0495634_0224480
387 Ga0495657_0104077
388 Ga0495657_0166221
389 Ga0495599_0004083
390 Ga0495599_0225782
391 Ga0495599_0230489
392 Ga0495623_0005952
393 Ga0495623_0146945
394 Ga0495623_0148855
395 Ga0495646_0115246
396 Ga0495600_0085774
397 Ga0495600_0195625
398 Ga0495604_0064682
399 Ga0495680_0163233
400 Ga0495680_0207785
401 Ga0495680_0214498
402 Ga0495675_0184857
403 Ga0495684_0014164
404 Ga0495684_0036215
405 Ga0495602_0064940
406 Ga0495615_0022752
407 Ga0496100_0405365
408 Ga0496105_0419536
409 Ga0501032_0024836
410 Ga0501034_0190850
411 Ga0501036_0038325
412 Ga0501038_0046366
413 Ga0501039_0530287
414 Ga0501043_0018808
415 Ga0501076_0294200
416 Ga0501239_004952
417 Ga0501249_026406
418 Ga0501259_049189
419 Ga0501225_0031517
420 Ga0501268_017171
421 Ga0501035_0037219
422 Ga0501044_0151577
423 nmdc:mga05p37_562917_c1
424 nmdc:mga0n895_163537_c1
425 Ga0495601_0104682
426 Ga0495601_0154708
427 Ga0495601_0159876
428 Ga0495595_0066031
429 Ga0495595_0091398
430 Ga0495619_0124512
431 Ga0495619_0206078
432 Ga0495619_0209636

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00665

rve

Integrase core domain

127

225

0.98

PF13683

rve_3

Integrase core domain

214

280

0.97

PF13333

rve_2

Integrase core domain

232

287

0.95

PF13276

HTH_21

HTH-like domain

42

100

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o03-assembly1.cif.gz_A-2 crystal structure of furb from m. tuberculosis- a zinc uptake regulator 0.8636 27 73
4ikf-assembly1.cif.gz_B pfv intasome with inhibitor mb-76 0.8295 106 219
6rwo-assembly1.cif.gz_D sivrcm intasome (q148h/g140s) in complex with bictegravir 0.8291 110 270
8a1p-assembly1.cif.gz_D hiv-1 integrase catalytic core domain and c-terminal domain in complex with allosteric integrase inhibitor bi-d 0.8264 110 270
8cbt-assembly1.cif.gz_B hiv-1 integrase catalytic core domain and c-terminal domain in complex with allosteric integrase inhibitor mut872 0.8231 110 270
ID Description Score Start End Superfamily
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9803 106 264 3.30.420.10
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9682 106 264 3.30.420.10
af_P9WKH9_102_261_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9627 106 260 3.30.420.10
af_Q47718_102_174_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9516 104 173 3.30.420.10
af_P19769_115_278_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9475 103 266 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A2S7DTL5-F1-model_v4 IS3 family transposase 0.9883 98 208 GO:0003676
GO:0015074
AF-B4X0X2-F1-model_v4 Integrase catalytic domain-containing protein 0.986 95 270 GO:0003676
GO:0015074
AF-A0A0H2UZ75-F1-model_v4 IS600 ORF2 0.9837 115 272 GO:0003676
GO:0015074
AF-X7E062-F1-model_v4 Integrase catalytic domain-containing protein 0.9836 112 215 GO:0003676
GO:0015074
AF-A0A561FZN0-F1-model_v4 deleted 0.9817 95 270

Map