F327666
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 216 | 175 | 432 | 155 |
Family's Representative Sequence
| Representative Sequence | 3300025928|Ga0207700_11379580|Ga0207700_113795801 |
| Length | 179 |
| Sequence | MWEFYSAQARACHPVSALSCIIEARMNASFLKQAIEMAAENVRQGGGPFAALVVRDGAVIAAGCNQVTRNNDPTAHAEMVAVREACRVLSDFQLSGCDVYSSCEPCPMCLGALFWARPARVFFAASKDDAAAAGFDDSFIYEQIDLPHSERRIPMIQVPDEDATRPFRDWVNRADKTEY |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 2 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 3 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 4 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 5 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 7 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 13 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 19 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 25 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 27 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 29 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 32 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 33 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 34 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 35 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 37 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 39 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 40 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 41 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 42 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 43 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 44 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 56 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 57 | 3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Metagenome | Rhizosphere |
| 58 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 79 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 81 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 82 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 83 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 84 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 85 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 86 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 87 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 88 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 89 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 90 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 91 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 92 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 93 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 94 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 95 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 96 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 97 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 98 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 99 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 100 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 101 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 102 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 103 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 104 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 105 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 106 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 107 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 108 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 109 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 110 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 111 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 112 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 113 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 114 | 3300041451 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG | Metagenome | Rhizoplane |
| 115 | 3300041494 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG | Metagenome | Unclassified |
| 116 | 3300042438 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 | Metagenome | Rhizosphere |
| 117 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 118 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 119 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 120 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 121 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 141 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 142 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 147 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 148 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 149 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 150 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 151 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 152 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 153 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 154 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 155 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 156 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 157 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 158 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 159 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 160 | 2554235283 | Bacillus safensis VK | Isolate | Rhizosphere |
| 161 | 2643221735 | Bacillus sp. Root920 | Isolate | Unclassified |
| 162 | 2684623153 | Bacillus pumilus SH-B9 | Isolate | Unclassified |
| 163 | 2687453109 | Bacillus pumilus SH-B11 | Isolate | Unclassified |
| 164 | 2811994870 | Bacillus sp. JB4 | Isolate | Unclassified |
| 165 | 2816332295 | Bacillus paralicheniformis MDJK30 | Isolate | Rhizosphere |
| 166 | 2818991468 | Bacillus safensis 3300 | Isolate | Rhizosphere |
| 167 | 2823526263 | Bacillus altitudinis P-10 | Isolate | Unclassified |
| 168 | 2908665501 | Bacillus pumilus 1391 | Isolate | Rhizosphere |
| 169 | 2919093281 | Bacillus safensis 1383 | Isolate | Rhizosphere |
| 170 | 2919726948 | Bacillus pumilus 4489 | Isolate | Unclassified |
| 171 | 2954773129 | Bacillus sp. TBS-096 | Isolate | Rhizosphere |
| 172 | 2962290636 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 173 | 2969765954 | Bacillus intestinalis GM2 | Isolate | Rhizosphere |
| 174 | 2980492589 | Bacillus subtilis GQJK2 | Isolate | Rhizosphere |
| 175 | 3006858327 | Bacillus paralicheniformis SUBG0010 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 91.67 |
| Metatranscriptomes | 0.93 |
| Isolates | 7.41 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.39 |
| Nodule | 0 |
| Rhizoplane | 1.39 |
| Rhizosphere | 89.35 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 11.11 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0207700_11379580 | 3300025928 | Bacteria | 627 |
| 2 | JGI25151J46595_10000020 | 3300003187 | Bacteria | 233547 |
| 3 | rootL2_10013517 | 3300003322 | Bacteria | 5163 |
| 4 | Ga0006562J51391_1001253 | 3300003578 | Bacteria | 3010 |
| 5 | Ga0070670_100179349 | 3300005331 | Bacteria | 1839 |
| 6 | Ga0070680_100069221 | 3300005336 | Bacteria | 2898 |
| 7 | Ga0070689_100002402 | 3300005340 | Bacteria | 12222 |
| 8 | Ga0070692_10243910 | 3300005345 | Bacteria | 1072 |
| 9 | Ga0070668_100085282 | 3300005347 | Bacteria | 2482 |
| 10 | Ga0070671_100063176 | 3300005355 | Bacteria | 3083 |
| 11 | Ga0070673_100033516 | 3300005364 | Bacteria | 3880 |
| 12 | Ga0070688_100191859 | 3300005365 | Bacteria | 1424 |
| 13 | Ga0070688_100253295 | 3300005365 | Unclassified | 1254 |
| 14 | Ga0070709_10046698 | 3300005434 | Unclassified | 2693 |
| 15 | Ga0070714_100000312 | 3300005435 | Bacteria | 36817 |
| 16 | Ga0070714_100002464 | 3300005435 | Bacteria | 13653 |
| 17 | Ga0070714_100383024 | 3300005435 | Bacteria | 1326 |
| 18 | Ga0070714_101086629 | 3300005435 | Unclassified | 779 |
| 19 | Ga0070713_100244319 | 3300005436 | Bacteria | 1635 |
| 20 | Ga0070711_100023846 | 3300005439 | Bacteria | 3985 |
| 21 | Ga0070711_100066945 | 3300005439 | Unclassified | 2518 |
| 22 | Ga0070711_100693632 | 3300005439 | Unclassified | 857 |
| 23 | Ga0070711_100884589 | 3300005439 | Unclassified | 761 |
| 24 | Ga0070705_100003233 | 3300005440 | Bacteria | 7999 |
| 25 | Ga0070694_100018883 | 3300005444 | Bacteria | 4380 |
| 26 | Ga0070708_100714728 | 3300005445 | Bacteria | 943 |
| 27 | Ga0070681_10113635 | 3300005458 | Bacteria | 2647 |
| 28 | Ga0070681_10361475 | 3300005458 | Unclassified | 1362 |
| 29 | Ga0070685_10023537 | 3300005466 | Bacteria | 3373 |
| 30 | Ga0070706_100006411 | 3300005467 | Bacteria | 11121 |
| 31 | Ga0070706_100443409 | 3300005467 | Bacteria | 1208 |
| 32 | Ga0070699_100004995 | 3300005518 | Bacteria | 11692 |
| 33 | Ga0070679_100020203 | 3300005530 | Bacteria | 6493 |
| 34 | Ga0070697_100008006 | 3300005536 | Bacteria | 8243 |
| 35 | Ga0068853_100086490 | 3300005539 | Bacteria | 2749 |
| 36 | Ga0070672_100079691 | 3300005543 | Bacteria | 2622 |
| 37 | Ga0070695_100043097 | 3300005545 | Bacteria | 2868 |
| 38 | Ga0070696_100012277 | 3300005546 | Bacteria | 5741 |
| 39 | Ga0070693_100000014 | 3300005547 | Bacteria | 68137 |
| 40 | Ga0070704_100025905 | 3300005549 | Bacteria | 3867 |
| 41 | Ga0070704_100488711 | 3300005549 | Bacteria | 1066 |
| 42 | Ga0068855_100015800 | 3300005563 | Bacteria | 9083 |
| 43 | Ga0068856_101135910 | 3300005614 | Bacteria | 798 |
| 44 | Ga0068859_100746974 | 3300005617 | Bacteria | 1067 |
| 45 | Ga0070717_11002263 | 3300006028 | Bacteria | 761 |
| 46 | Ga0070717_11363593 | 3300006028 | Bacteria | 644 |
| 47 | Ga0070715_10040637 | 3300006163 | Bacteria | 1945 |
| 48 | Ga0097621_100009393 | 3300006237 | Bacteria | 7097 |
| 49 | Ga0097621_100182772 | 3300006237 | Bacteria | 1812 |
| 50 | Ga0068871_100115210 | 3300006358 | Unclassified | 2265 |
| 51 | Ga0068871_100498788 | 3300006358 | Bacteria | 1097 |
| 52 | Ga0075430_100537509 | 3300006846 | Bacteria | 964 |
| 53 | Ga0075431_100041045 | 3300006847 | Bacteria | 4771 |
| 54 | Ga0075433_10155721 | 3300006852 | Bacteria | 2033 |
| 55 | Ga0075429_100044531 | 3300006880 | Bacteria | 3860 |
| 56 | Ga0075436_100319016 | 3300006914 | Bacteria | 1116 |
| 57 | Ga0097620_100746985 | 3300006931 | Bacteria | 1067 |
| 58 | Ga0105240_11347889 | 3300009093 | Bacteria | 751 |
| 59 | Ga0111539_10464015 | 3300009094 | Bacteria | 1475 |
| 60 | Ga0105248_10477176 | 3300009177 | Bacteria | 1406 |
| 61 | Ga0105238_10054257 | 3300009551 | Bacteria | 4026 |
| 62 | Ga0105238_10723247 | 3300009551 | Bacteria | 1008 |
| 63 | Ga0157370_10033474 | 3300013104 | Bacteria | 5011 |
| 64 | Ga0157369_10058421 | 3300013105 | Bacteria | 4161 |
| 65 | Ga0157378_10845694 | 3300013297 | Bacteria | 943 |
| 66 | Ga0157372_10405654 | 3300013307 | Bacteria | 1588 |
| 67 | Ga0163163_10175291 | 3300014325 | Bacteria | 2191 |
| 68 | Ga0163163_10331286 | 3300014325 | Bacteria | 1577 |
| 69 | Ga0157376_12481733 | 3300014969 | Bacteria | 558 |
| 70 | Ga0213876_10086742 | 3300021384 | Unclassified | 1656 |
| 71 | Ga0213875_10019070 | 3300021388 | Bacteria | 3302 |
| 72 | Ga0228598_1003486 | 3300024227 | Bacteria | 3384 |
| 73 | Ga0209025_1000001 | 3300025294 | Bacteria | 1888151 |
| 74 | Ga0207692_10159058 | 3300025898 | Bacteria | 1300 |
| 75 | Ga0207699_10130315 | 3300025906 | Unclassified | 1639 |
| 76 | Ga0207684_10598490 | 3300025910 | Bacteria | 942 |
| 77 | Ga0207695_10119357 | 3300025913 | Bacteria | 2607 |
| 78 | Ga0207695_10935868 | 3300025913 | Bacteria | 746 |
| 79 | Ga0207693_10040825 | 3300025915 | Unclassified | 3654 |
| 80 | Ga0207660_10089887 | 3300025917 | Bacteria | 2274 |
| 81 | Ga0207662_10783927 | 3300025918 | Bacteria | 671 |
| 82 | Ga0207694_10392377 | 3300025924 | Bacteria | 1153 |
| 83 | Ga0207650_10185496 | 3300025925 | Bacteria | 1659 |
| 84 | Ga0207700_10039118 | 3300025928 | Bacteria | 3449 |
| 85 | Ga0207700_11092950 | 3300025928 | Bacteria | 713 |
| 86 | Ga0207664_10000031 | 3300025929 | Bacteria | 179373 |
| 87 | Ga0207664_10003047 | 3300025929 | Bacteria | 11147 |
| 88 | Ga0207664_10263413 | 3300025929 | Unclassified | 1508 |
| 89 | Ga0207644_10046679 | 3300025931 | Bacteria | 3087 |
| 90 | Ga0207670_10001756 | 3300025936 | Bacteria | 11342 |
| 91 | Ga0207691_10396454 | 3300025940 | Bacteria | 1177 |
| 92 | Ga0207711_10109902 | 3300025941 | Bacteria | 2450 |
| 93 | Ga0207689_10054362 | 3300025942 | Bacteria | 3297 |
| 94 | Ga0207661_10700888 | 3300025944 | Bacteria | 931 |
| 95 | Ga0207651_10046314 | 3300025960 | Bacteria | 2923 |
| 96 | Ga0207668_10430154 | 3300025972 | Bacteria | 1122 |
| 97 | Ga0207639_10330398 | 3300026041 | Bacteria | 1356 |
| 98 | Ga0207639_11746449 | 3300026041 | Bacteria | 583 |
| 99 | Ga0207428_10965867 | 3300027907 | Bacteria | 600 |
| 100 | Ga0268266_11202003 | 3300028379 | Bacteria | 733 |
| 101 | Ga0265760_10016054 | 3300031090 | Bacteria | 2148 |
| 102 | Ga0265329_10048872 | 3300031242 | Bacteria | 1349 |
| 103 | Ga0265331_10439739 | 3300031250 | Bacteria | 586 |
| 104 | Ga0265316_10095515 | 3300031344 | Bacteria | 2264 |
| 105 | Ga0307513_10273430 | 3300031456 | Bacteria | 1471 |
| 106 | Ga0316578_10576487 | 3300031728 | Bacteria | 660 |
| 107 | Ga0316577_10049275 | 3300031733 | Bacteria | 2351 |
| 108 | Ga0373926_0018313 | 3300035083 | Unclassified | 2407 |
| 109 | Ga0373944_0054271 | 3300035089 | Bacteria | 1270 |
| 110 | Ga0373944_0419792 | 3300035089 | Bacteria | 518 |
| 111 | Ga0373923_0002062 | 3300035111 | Bacteria | 6068 |
| 112 | Ga0373923_0330272 | 3300035111 | Bacteria | 725 |
| 113 | Ga0373936_0016734 | 3300035113 | Bacteria | 2822 |
| 114 | Ga0373945_0000437 | 3300035116 | Bacteria | 11754 |
| 115 | Ga0373945_0222849 | 3300035116 | Bacteria | 789 |
| 116 | Ga0373953_0018332 | 3300035117 | Bacteria | 2588 |
| 117 | Ga0373954_0029828 | 3300035118 | Bacteria | 2514 |
| 118 | Ga0373956_0025225 | 3300035119 | Bacteria | 2567 |
| 119 | Ga0373956_0096128 | 3300035119 | Bacteria | 1370 |
| 120 | Ga0373957_0112960 | 3300035120 | Bacteria | 1095 |
| 121 | Ga0373943_0001053 | 3300035170 | Bacteria | 12241 |
| 122 | Ga0373943_0019115 | 3300035170 | Unclassified | 3150 |
| 123 | Ga0373946_0004344 | 3300035171 | Bacteria | 5074 |
| 124 | Ga0373955_0010560 | 3300035172 | Bacteria | 4365 |
| 125 | Ga0316574_0136601 | 3300035398 | Bacteria | 1579 |
| 126 | Ga0373924_0067411 | 3300035410 | Bacteria | 1505 |
| 127 | Ga0373935_0000553 | 3300035692 | Bacteria | 19458 |
| 128 | Ga0373935_0028935 | 3300035692 | Bacteria | 3427 |
| 129 | Ga0373935_0146667 | 3300035692 | Bacteria | 1598 |
| 130 | Ga0373927_0000213 | 3300035695 | Bacteria | 46171 |
| 131 | Ga0373927_0002234 | 3300035695 | Bacteria | 14221 |
| 132 | Ga0373933_0892378 | 3300035724 | Bacteria | 585 |
| 133 | Ga0373947_0000516 | 3300035725 | Bacteria | 22506 |
| 134 | Ga0373937_0051473 | 3300036401 | Bacteria | 3775 |
| 135 | Ga0316582_0483866 | 3300036647 | Bacteria | 853 |
| 136 | Ga0373925_0000511 | 3300037068 | Bacteria | 39064 |
| 137 | Ga0373925_0010793 | 3300037068 | Bacteria | 6624 |
| 138 | Ga0395899_0421958 | 3300037312 | Bacteria | 879 |
| 139 | Ga0395898_0364413 | 3300037466 | Bacteria | 1378 |
| 140 | Ga0395898_1370570 | 3300037466 | Unclassified | 635 |
| 141 | Ga0395905_0071984 | 3300037471 | Bacteria | 3241 |
| 142 | Ga0395905_0098142 | 3300037471 | Bacteria | 2751 |
| 143 | Ga0436364_0269158 | 3300037853 | Bacteria | 1979 |
| 144 | Ga0436364_1394139 | 3300037853 | Bacteria | 562 |
| 145 | Ga0436363_1151560 | 3300039450 | Bacteria | 1403 |
| 146 | Ga0436362_0589699 | 3300039453 | Bacteria | 1343 |
| 147 | Ga0451791_0745704 | 3300041451 | Bacteria | 1894 |
| 148 | Ga0451837_0583827 | 3300041494 | Bacteria | 993 |
| 149 | Ga0439459_0020981 | 3300042438 | Bacteria | 1251 |
| 150 | Ga0466970_0110496 | 3300044765 | Unclassified | 1501 |
| 151 | Ga0451576_0912933 | 3300045051 | Bacteria | 921 |
| 152 | Ga0466958_0242452 | 3300045836 | Bacteria | 1152 |
| 153 | Ga0466958_0769404 | 3300045836 | Bacteria | 628 |
| 154 | Ga0466967_1634580 | 3300045976 | Unclassified | 642 |
| 155 | Ga0495592_0199808 | 3300046454 | Bacteria | 1350 |
| 156 | Ga0495590_0112773 | 3300046457 | Bacteria | 971 |
| 157 | Ga0495651_0320646 | 3300046462 | Bacteria | 1033 |
| 158 | Ga0495653_0058426 | 3300046463 | Bacteria | 2932 |
| 159 | Ga0495580_0000042 | 3300046472 | Bacteria | 70551 |
| 160 | Ga0495580_0423758 | 3300046472 | Bacteria | 895 |
| 161 | Ga0495662_0045752 | 3300046476 | Unclassified | 2113 |
| 162 | Ga0495662_0550708 | 3300046476 | Bacteria | 565 |
| 163 | Ga0495664_0243595 | 3300046477 | Bacteria | 1087 |
| 164 | Ga0495594_0065094 | 3300046499 | Bacteria | 2022 |
| 165 | Ga0495608_0008390 | 3300046511 | Bacteria | 7241 |
| 166 | Ga0495618_0106102 | 3300046514 | Bacteria | 1799 |
| 167 | Ga0495618_0631920 | 3300046514 | Bacteria | 635 |
| 168 | Ga0495628_0000395 | 3300046516 | Bacteria | 39976 |
| 169 | Ga0495628_0005772 | 3300046516 | Bacteria | 10846 |
| 170 | Ga0495628_0072151 | 3300046516 | Bacteria | 2691 |
| 171 | Ga0495630_0647844 | 3300046517 | Unclassified | 809 |
| 172 | Ga0495637_0106030 | 3300046520 | Bacteria | 1094 |
| 173 | Ga0495652_0172160 | 3300046529 | Bacteria | 1670 |
| 174 | Ga0495665_0653835 | 3300046531 | Unclassified | 523 |
| 175 | Ga0495586_0470151 | 3300046535 | Unclassified | 725 |
| 176 | Ga0495587_0235372 | 3300046536 | Bacteria | 1031 |
| 177 | Ga0495645_0203506 | 3300046543 | Bacteria | 1341 |
| 178 | Ga0495635_0769579 | 3300046663 | Bacteria | 622 |
| 179 | Ga0495657_0005812 | 3300046675 | Bacteria | 9714 |
| 180 | Ga0495599_0694650 | 3300046678 | Unclassified | 587 |
| 181 | Ga0495646_0042226 | 3300046680 | Unclassified | 2799 |
| 182 | Ga0495600_0245158 | 3300046809 | Bacteria | 1141 |
| 183 | Ga0495604_0042407 | 3300047317 | Unclassified | 3566 |
| 184 | Ga0495675_0140497 | 3300047444 | Bacteria | 1497 |
| 185 | Ga0495684_0078639 | 3300047471 | Bacteria | 2503 |
| 186 | Ga0495684_0833218 | 3300047471 | Bacteria | 600 |
| 187 | Ga0495602_0032249 | 3300048088 | Bacteria | 4936 |
| 188 | Ga0496104_0397853 | 3300048907 | Bacteria | 1290 |
| 189 | Ga0496105_0797417 | 3300048908 | Bacteria | 718 |
| 190 | Ga0496116_0048882 | 3300048919 | Bacteria | 2834 |
| 191 | Ga0501070_0361524 | 3300049586 | Bacteria | 1177 |
| 192 | nmdc:mga05p37_1271765_c1 | 3300050507 | Bacteria | 753 |
| 193 | nmdc:mga05p37_267117_c1 | 3300050507 | Bacteria | 2045 |
| 194 | nmdc:mga09592_89430_c1 | 3300050508 | Bacteria | 2630 |
| 195 | nmdc:mga06r32_66909_c1 | 3300050510 | Bacteria | 3468 |
| 196 | nmdc:mga08y16_460294_c1 | 3300050511 | Bacteria | 1296 |
| 197 | nmdc:mga0rr50_229597_c1 | 3300050513 | Bacteria | 1535 |
| 198 | nmdc:mga08x19_832680_c1 | 3300050514 | Bacteria | 655 |
| 199 | Ga0495619_0528703 | 3300053085 | Bacteria | 810 |
| 200 | Ga0500604_0002464 | 3300053151 | Bacteria | 5045 |
| 201 | 2555469680 | 2554235283 | Bacteria | 3683090 |
| 202 | 2644739598 | 2643221735 | Bacteria | 3676263 |
| 203 | 2686996491 | 2684623153 | Bacteria | 3878815 |
| 204 | 2687497742 | 2687453109 | Bacteria | 3860091 |
| 205 | 2812315622 | 2811994870 | Bacteria | 3776934 |
| 206 | 2817479566 | 2816332295 | Bacteria | 4352468 |
| 207 | 2819724389 | 2818991468 | Bacteria | 3723169 |
| 208 | 2823527614 | 2823526263 | Bacteria | 3765752 |
| 209 | 2908666107 | 2908665501 | Bacteria | 3678115 |
| 210 | 2919093701 | 2919093281 | Bacteria | 3660974 |
| 211 | 2919729396 | 2919726948 | Bacteria | 3696050 |
| 212 | 2954774890 | 2954773129 | Bacteria | 3741715 |
| 213 | 2962292276 | 2962290636 | Bacteria | 4072939 |
| 214 | 2969767961 | 2969765954 | Bacteria | 4216713 |
| 215 | 2980494050 | 2980492589 | Bacteria | 4072961 |
| 216 | 3006859890 | 3006858327 | Bacteria | 4317835 |
| 217 | Ga0207700_11379580 | |||
| 218 | JGI25151J46595_10000020 | |||
| 219 | rootL2_10013517 | |||
| 220 | Ga0006562J51391_1001253 | |||
| 221 | Ga0070670_100179349 | |||
| 222 | Ga0070680_100069221 | |||
| 223 | Ga0070689_100002402 | |||
| 224 | Ga0070692_10243910 | |||
| 225 | Ga0070668_100085282 | |||
| 226 | Ga0070671_100063176 | |||
| 227 | Ga0070673_100033516 | |||
| 228 | Ga0070688_100191859 | |||
| 229 | Ga0070688_100253295 | |||
| 230 | Ga0070709_10046698 | |||
| 231 | Ga0070714_100000312 | |||
| 232 | Ga0070714_100002464 | |||
| 233 | Ga0070714_100383024 | |||
| 234 | Ga0070714_101086629 | |||
| 235 | Ga0070713_100244319 | |||
| 236 | Ga0070711_100023846 | |||
| 237 | Ga0070711_100066945 | |||
| 238 | Ga0070711_100693632 | |||
| 239 | Ga0070711_100884589 | |||
| 240 | Ga0070705_100003233 | |||
| 241 | Ga0070694_100018883 | |||
| 242 | Ga0070708_100714728 | |||
| 243 | Ga0070681_10113635 | |||
| 244 | Ga0070681_10361475 | |||
| 245 | Ga0070685_10023537 | |||
| 246 | Ga0070706_100006411 | |||
| 247 | Ga0070706_100443409 | |||
| 248 | Ga0070699_100004995 | |||
| 249 | Ga0070679_100020203 | |||
| 250 | Ga0070697_100008006 | |||
| 251 | Ga0068853_100086490 | |||
| 252 | Ga0070672_100079691 | |||
| 253 | Ga0070695_100043097 | |||
| 254 | Ga0070696_100012277 | |||
| 255 | Ga0070693_100000014 | |||
| 256 | Ga0070704_100025905 | |||
| 257 | Ga0070704_100488711 | |||
| 258 | Ga0068855_100015800 | |||
| 259 | Ga0068856_101135910 | |||
| 260 | Ga0068859_100746974 | |||
| 261 | Ga0070717_11002263 | |||
| 262 | Ga0070717_11363593 | |||
| 263 | Ga0070715_10040637 | |||
| 264 | Ga0097621_100009393 | |||
| 265 | Ga0097621_100182772 | |||
| 266 | Ga0068871_100115210 | |||
| 267 | Ga0068871_100498788 | |||
| 268 | Ga0075430_100537509 | |||
| 269 | Ga0075431_100041045 | |||
| 270 | Ga0075433_10155721 | |||
| 271 | Ga0075429_100044531 | |||
| 272 | Ga0075436_100319016 | |||
| 273 | Ga0097620_100746985 | |||
| 274 | Ga0105240_11347889 | |||
| 275 | Ga0111539_10464015 | |||
| 276 | Ga0105248_10477176 | |||
| 277 | Ga0105238_10054257 | |||
| 278 | Ga0105238_10723247 | |||
| 279 | Ga0157370_10033474 | |||
| 280 | Ga0157369_10058421 | |||
| 281 | Ga0157378_10845694 | |||
| 282 | Ga0157372_10405654 | |||
| 283 | Ga0163163_10175291 | |||
| 284 | Ga0163163_10331286 | |||
| 285 | Ga0157376_12481733 | |||
| 286 | Ga0213876_10086742 | |||
| 287 | Ga0213875_10019070 | |||
| 288 | Ga0228598_1003486 | |||
| 289 | Ga0209025_1000001 | |||
| 290 | Ga0207692_10159058 | |||
| 291 | Ga0207699_10130315 | |||
| 292 | Ga0207684_10598490 | |||
| 293 | Ga0207695_10119357 | |||
| 294 | Ga0207695_10935868 | |||
| 295 | Ga0207693_10040825 | |||
| 296 | Ga0207660_10089887 | |||
| 297 | Ga0207662_10783927 | |||
| 298 | Ga0207694_10392377 | |||
| 299 | Ga0207650_10185496 | |||
| 300 | Ga0207700_10039118 | |||
| 301 | Ga0207700_11092950 | |||
| 302 | Ga0207664_10000031 | |||
| 303 | Ga0207664_10003047 | |||
| 304 | Ga0207664_10263413 | |||
| 305 | Ga0207644_10046679 | |||
| 306 | Ga0207670_10001756 | |||
| 307 | Ga0207691_10396454 | |||
| 308 | Ga0207711_10109902 | |||
| 309 | Ga0207689_10054362 | |||
| 310 | Ga0207661_10700888 | |||
| 311 | Ga0207651_10046314 | |||
| 312 | Ga0207668_10430154 | |||
| 313 | Ga0207639_10330398 | |||
| 314 | Ga0207639_11746449 | |||
| 315 | Ga0207428_10965867 | |||
| 316 | Ga0268266_11202003 | |||
| 317 | Ga0265760_10016054 | |||
| 318 | Ga0265329_10048872 | |||
| 319 | Ga0265331_10439739 | |||
| 320 | Ga0265316_10095515 | |||
| 321 | Ga0307513_10273430 | |||
| 322 | Ga0316578_10576487 | |||
| 323 | Ga0316577_10049275 | |||
| 324 | Ga0373926_0018313 | |||
| 325 | Ga0373944_0054271 | |||
| 326 | Ga0373944_0419792 | |||
| 327 | Ga0373923_0002062 | |||
| 328 | Ga0373923_0330272 | |||
| 329 | Ga0373936_0016734 | |||
| 330 | Ga0373945_0000437 | |||
| 331 | Ga0373945_0222849 | |||
| 332 | Ga0373953_0018332 | |||
| 333 | Ga0373954_0029828 | |||
| 334 | Ga0373956_0025225 | |||
| 335 | Ga0373956_0096128 | |||
| 336 | Ga0373957_0112960 | |||
| 337 | Ga0373943_0001053 | |||
| 338 | Ga0373943_0019115 | |||
| 339 | Ga0373946_0004344 | |||
| 340 | Ga0373955_0010560 | |||
| 341 | Ga0316574_0136601 | |||
| 342 | Ga0373924_0067411 | |||
| 343 | Ga0373935_0000553 | |||
| 344 | Ga0373935_0028935 | |||
| 345 | Ga0373935_0146667 | |||
| 346 | Ga0373927_0000213 | |||
| 347 | Ga0373927_0002234 | |||
| 348 | Ga0373933_0892378 | |||
| 349 | Ga0373947_0000516 | |||
| 350 | Ga0373937_0051473 | |||
| 351 | Ga0316582_0483866 | |||
| 352 | Ga0373925_0000511 | |||
| 353 | Ga0373925_0010793 | |||
| 354 | Ga0395899_0421958 | |||
| 355 | Ga0395898_0364413 | |||
| 356 | Ga0395898_1370570 | |||
| 357 | Ga0395905_0071984 | |||
| 358 | Ga0395905_0098142 | |||
| 359 | Ga0436364_0269158 | |||
| 360 | Ga0436364_1394139 | |||
| 361 | Ga0436363_1151560 | |||
| 362 | Ga0436362_0589699 | |||
| 363 | Ga0451791_0745704 | |||
| 364 | Ga0451837_0583827 | |||
| 365 | Ga0439459_0020981 | |||
| 366 | Ga0466970_0110496 | |||
| 367 | Ga0451576_0912933 | |||
| 368 | Ga0466958_0242452 | |||
| 369 | Ga0466958_0769404 | |||
| 370 | Ga0466967_1634580 | |||
| 371 | Ga0495592_0199808 | |||
| 372 | Ga0495590_0112773 | |||
| 373 | Ga0495651_0320646 | |||
| 374 | Ga0495653_0058426 | |||
| 375 | Ga0495580_0000042 | |||
| 376 | Ga0495580_0423758 | |||
| 377 | Ga0495662_0045752 | |||
| 378 | Ga0495662_0550708 | |||
| 379 | Ga0495664_0243595 | |||
| 380 | Ga0495594_0065094 | |||
| 381 | Ga0495608_0008390 | |||
| 382 | Ga0495618_0106102 | |||
| 383 | Ga0495618_0631920 | |||
| 384 | Ga0495628_0000395 | |||
| 385 | Ga0495628_0005772 | |||
| 386 | Ga0495628_0072151 | |||
| 387 | Ga0495630_0647844 | |||
| 388 | Ga0495637_0106030 | |||
| 389 | Ga0495652_0172160 | |||
| 390 | Ga0495665_0653835 | |||
| 391 | Ga0495586_0470151 | |||
| 392 | Ga0495587_0235372 | |||
| 393 | Ga0495645_0203506 | |||
| 394 | Ga0495635_0769579 | |||
| 395 | Ga0495657_0005812 | |||
| 396 | Ga0495599_0694650 | |||
| 397 | Ga0495646_0042226 | |||
| 398 | Ga0495600_0245158 | |||
| 399 | Ga0495604_0042407 | |||
| 400 | Ga0495675_0140497 | |||
| 401 | Ga0495684_0078639 | |||
| 402 | Ga0495684_0833218 | |||
| 403 | Ga0495602_0032249 | |||
| 404 | Ga0496104_0397853 | |||
| 405 | Ga0496105_0797417 | |||
| 406 | Ga0496116_0048882 | |||
| 407 | Ga0501070_0361524 | |||
| 408 | nmdc:mga05p37_1271765_c1 | |||
| 409 | nmdc:mga05p37_267117_c1 | |||
| 410 | nmdc:mga09592_89430_c1 | |||
| 411 | nmdc:mga06r32_66909_c1 | |||
| 412 | nmdc:mga08y16_460294_c1 | |||
| 413 | nmdc:mga0rr50_229597_c1 | |||
| 414 | nmdc:mga08x19_832680_c1 | |||
| 415 | Ga0495619_0528703 | |||
| 416 | Ga0500604_0002464 | |||
| 417 | 2555469680 | |||
| 418 | 2644739598 | |||
| 419 | 2686996491 | |||
| 420 | 2687497742 | |||
| 421 | 2812315622 | |||
| 422 | 2817479566 | |||
| 423 | 2819724389 | |||
| 424 | 2823527614 | |||
| 425 | 2908666107 | |||
| 426 | 2919093701 | |||
| 427 | 2919729396 | |||
| 428 | 2954774890 | |||
| 429 | 2962292276 | |||
| 430 | 2969767961 | |||
| 431 | 2980494050 | |||
| 432 | 3006859890 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1tiy-assembly1.cif.gz_A | x-ray structure of guanine deaminase from bacillus subtilis northeast structural genomics consortium target sr160 | 0.986 | 1 | 156 |
| 1tiy-assembly1.cif.gz_A | x-ray structure of guanine deaminase from bacillus subtilis northeast structural genomics consortium target sr160 | 0.9798 | 1 | 156 |
| 5jfy-assembly1.cif.gz_B | crystal structure of a plant cytidine deaminase | 0.9774 | 4 | 100 |
| 5jfy-assembly2.cif.gz_D | crystal structure of a plant cytidine deaminase | 0.9714 | 4 | 100 |
| 6vpc-assembly1.cif.gz_F | structure of the spcas9 dna adenine base editor - abe8e | 0.9712 | 2 | 104 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1tiyB00 | Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 | 0.9894 | 2 | 150 | 3.40.140.10 |
| 1tiyB00 | Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 | 0.9828 | 2 | 150 | 3.40.140.10 |
| af_A0A1D6PV52_1_75_3.40.140.10 | Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 | 0.9799 | 44 | 100 | 3.40.140.10 |
| af_A0A0R0IBM9_22_185_3.40.140.10 | Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 | 0.9771 | 5 | 114 | 3.40.140.10 |
| af_A0A1D6ELV0_114_227_3.40.140.10 | Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 | 0.9719 | 4 | 113 | 3.40.140.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A538UA56-F1-model_v4 | CMP/dCMP-type deaminase domain-containing protein | 0.9953 | 4 | 135 |
GO:0005337
GO:0005886 GO:0008270 GO:0015293 GO:0016787 |
| AF-A0A060BSU2-F1-model_v4 | tRNA(adenine(34)) deaminase (EC 3.5.4.33) | 0.9891 | 26 | 103 |
GO:0002100
GO:0008270 GO:0052717 |
| AF-A0A183C802-F1-model_v4 | protein kinase C (EC 2.7.11.13) | 0.9888 | 4 | 100 |
GO:0004698
GO:0004699 GO:0005524 GO:0005829 GO:0007200 GO:0008270 GO:0016020 GO:0016787 GO:0035556 |
| AF-A0A7E4SEV0-F1-model_v4 | deleted | 0.9791 | 10 | 103 |
|
| AF-A0A3P1CQI5-F1-model_v4 | Probable molybdenum cofactor guanylyltransferase (MoCo guanylyltransferase) (EC 2.7.7.77) (GTP:molybdopterin guanylyltransferase) (Mo-MPT guanylyltransferase) (Molybdopterin guanylyltransferase) (Molybdopterin-guanine dinucleotide synthase) (MGD synthase) | 0.979 | 4 | 156 |
GO:0005525
GO:0005737 GO:0006152 GO:0006777 GO:0008270 GO:0047974 GO:0061603 |