F325625
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 214 | 166 | 428 | 717 |
Family's Representative Sequence
| Representative Sequence | 3300047317|Ga0495604_0011659|Ga0495604_0011659_942_3206 |
| Length | 754 |
| Sequence | MDHRTDASPRPDRPAATALGPHTSPDERAAVRERAEAVLRELAGPSAVLREDQWLAIEALVVDGRRALVVQRTGWGKSAVYFIATALLRARGAGPTVIVSPLLALMRNQVDSAARAGIHARTINSANPEEWEAVQTEVAAGEVDILLVSPERLNNPDFRDNVLPKLAASTGLLVVDEAHCISDWGHDFRPDYRRLRTMLAELAPGVPVLATTATANARVTADVAEQLGTGAAPGENVAADDDRRALVLRGPLDRESLSLSVLALPDAAHRLGWLADHLSELPGSGIVYTLTVAAADEVTAFLRSRGFPVASYSGRTEDAERRTAEADLLANRVKALVATSALGMGFDKPDLGFVVHLGSPGSPIAYYQQVGRAGRGVDRAEVLLLPGREDEAIWRYFASLGFPPEEQVRRTLDALAEAGRPLSTAALETRVDLRRARLETMLKVLDVDGAVRRVRGGWESTGQPWAYDGPRYAKVAASREAEQHAMRAYASSSDCRMEFLRRQLDDPDAAPCGRCDNCAGARHGADVSPDALAAARAALGRPGVTFEPRRLWPTGMEALGVSLKGRIPAGEQAETGRALGRLSDIGWGTRLRGLLAESAPDGPVPADVVDALVSVVADWARGPGGWAGPEAADGSRLARPAGVVTMASATRPALVESLGGRIAAIGRLPLLGRLEYATGRPPHGPRSNSAQRLHSLAGTLVVPDGLRAALAEAPGPVLLVDDLVDSGWTVTVAARLLRQAGAGPVLPLVLAVQA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 2 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 3 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 4 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 6 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 8 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 9 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 10 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 11 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 12 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 13 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 14 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 15 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 16 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 17 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 18 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 19 | 3300015688 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 | Metagenome | Rhizosphere |
| 20 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 21 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 22 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 33 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 34 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 35 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 36 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 37 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 38 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 39 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 40 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 41 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 42 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 43 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 44 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 45 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 46 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 47 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 48 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 49 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 50 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 51 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 52 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 53 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 54 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 55 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 56 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 57 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 84 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 85 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 86 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 87 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 88 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 89 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 90 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 91 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 92 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 93 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 94 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 95 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 96 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 97 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 98 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 99 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 100 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 101 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 102 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 103 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 104 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 105 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 107 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 112 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 113 | 3300053099 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere | Metagenome | Endosphere |
| 114 | 3300053107 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere | Metagenome | Endosphere |
| 115 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 116 | 3300053137 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere | Metagenome | Endosphere |
| 117 | 3300053149 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere | Metagenome | Endosphere |
| 118 | 3300053160 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere | Metagenome | Endosphere |
| 119 | 3300053739 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere | Metagenome | Endosphere |
| 120 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 122 | 2554235005 | Streptomyces violaceusniger SPC6 | Isolate | Rhizosphere |
| 123 | 2616644941 | Streptomyces atratus OK807 | Isolate | Rhizosphere |
| 124 | 2643221601 | Kitasatospora sp. Root187 | Isolate | Unclassified |
| 125 | 2643221631 | Kitasatospora sp. Root107 | Isolate | Unclassified |
| 126 | 2643221670 | Streptomyces sp. Root431 | Isolate | Unclassified |
| 127 | 2643221714 | Streptomyces sp. Root264 | Isolate | Unclassified |
| 128 | 2728369276 | Kineococcus rhizosphaerae DSM 19711 | Isolate | Rhizosphere |
| 129 | 2767802112 | Streptomyces avicenniae NRRL B-24776 | Isolate | Rhizosphere |
| 130 | 2784132148 | Streptomyces sp. E5N91 SAI-083 | Isolate | Unclassified |
| 131 | 2784746763 | Streptomyces ossamyceticus SAI-001 | Isolate | Unclassified |
| 132 | 2791355406 | Streptomyces rhizosphaericus NRRL B-24304 | Isolate | Unclassified |
| 133 | 2808606448 | Streptomyces sp. 193411 | Isolate | Unclassified |
| 134 | 2818991463 | Streptomyces argenteolus 3259 | Isolate | Rhizosphere |
| 135 | 2818991472 | Kitasatospora viridis DSM 44826 | Isolate | Rhizosphere |
| 136 | 2862281513 | Streptomyces sp. Act143 | Isolate | Rhizosphere |
| 137 | 2867369537 | Streptomyces sp. Z26 | Isolate | Unclassified |
| 138 | 2867475112 | Streptomyces sp. TM32 | Isolate | Unclassified |
| 139 | 2873151551 | Streptomyces silaceus ACCC40021 | Isolate | Rhizosphere |
| 140 | 2875391855 | Streptomyces cavourensis 1AS2a | Isolate | Rhizosphere |
| 141 | 2912715099 | Streptomyces sp. Z423-1 | Isolate | Rhizosphere |
| 142 | 2912723979 | Streptomyces sp. NEAU-sy36 | Isolate | Rhizosphere |
| 143 | 2946045630 | Streptomyces sp. W4I9-2 | Isolate | Rhizosphere |
| 144 | 2946072368 | Streptomyces achromogenes W4I19-2 | Isolate | Rhizosphere |
| 145 | 2954002825 | Streptomyces turgidiscabies W2I16 | Isolate | Rhizosphere |
| 146 | 2990044586 | Streptomyces sedi JCM 16909 | Isolate | Unclassified |
| 147 | 2990088156 | Streptomyces albidus CAP 215 | Isolate | Unclassified |
| 148 | 2997600082 | Streptomyces coffeae CA1R205 | Isolate | Unclassified |
| 149 | 3002998708 | Actinomadura barringtoniae GKU 128 | Isolate | Unclassified |
| 150 | 3006321560 | Actinacidiphila epipremni PRB2-1 | Isolate | Unclassified |
| 151 | 3006393351 | Streptomyces sp. SID4985 | Isolate | Unclassified |
| 152 | 3006425503 | Streptomyces zingiberis PLAI1-29 | Isolate | Unclassified |
| 153 | 8008485437 | Streptomyces mimosae 3MP-10 | Isolate | Unclassified |
| 154 | 8023623736 | Streptomyces sp. 111WW2 | Isolate | Unclassified |
| 155 | 8025478263 | Streptomyces telluris AA8 | Isolate | Rhizosphere |
| 156 | 8025524527 | Streptomyces sp. 3MP-14 | Isolate | Unclassified |
| 157 | 8033684223 | Streptomyces phytophilus PIP175 | Isolate | Unclassified |
| 158 | 8047893842 | Streptomyces cangkringensis DSM 41769 | Isolate | Rhizosphere |
| 159 | 8048127548 | Streptomyces samsunensis DSM 42010 | Isolate | Rhizosphere |
| 160 | 8048356638 | Streptomyces rhizosphaericus DSM 41760 | Isolate | Rhizosphere |
| 161 | 8048369669 | Streptomyces indonesiensis DSM 41759 | Isolate | Rhizoplane |
| 162 | 8048379754 | Streptomyces asiaticus DSM 41761 | Isolate | Rhizosphere |
| 163 | 8048406513 | Streptomyces heilongjiangensis NEAU-W2 | Isolate | Unclassified |
| 164 | 8054160619 | Streptomyces rhizoryzae RS10V-4 | Isolate | Rhizosphere |
| 165 | 8056447290 | Streptomyces huiliensis SCA2-4 | Isolate | Rhizosphere |
| 166 | 8056667051 | Streptomyces sichuanensis SCA3-4 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 78.97 |
| Metatranscriptomes | 0 |
| Isolates | 21.03 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.07 |
| Nodule | 0 |
| Rhizoplane | 3.27 |
| Rhizosphere | 74.3 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0495604_0011659 | 3300047317 | Bacteria | 6991 |
| 2 | JGI25160J50197_1011779 | 3300003354 | Bacteria | 3074 |
| 3 | Ga0068868_100028833 | 3300005338 | Bacteria | 4248 |
| 4 | Ga0070714_100008533 | 3300005435 | Bacteria | 8012 |
| 5 | Ga0070700_100000049 | 3300005441 | Bacteria | 89497 |
| 6 | Ga0070706_100048306 | 3300005467 | Bacteria | 3928 |
| 7 | Ga0068864_100026623 | 3300005618 | Bacteria | 4877 |
| 8 | Ga0068863_100006693 | 3300005841 | Bacteria | 11310 |
| 9 | Ga0068863_100096763 | 3300005841 | Bacteria | 2803 |
| 10 | Ga0081455_10044357 | 3300005937 | Bacteria | 3880 |
| 11 | Ga0075363_100017237 | 3300006048 | Bacteria | 3579 |
| 12 | Ga0075367_10000789 | 3300006178 | Bacteria | 12457 |
| 13 | Ga0099794_10022328 | 3300007265 | Bacteria | 2884 |
| 14 | Ga0105248_10013120 | 3300009177 | Bacteria | 9125 |
| 15 | Ga0157374_10032466 | 3300013296 | Bacteria | 4753 |
| 16 | Ga0163163_10012044 | 3300014325 | Bacteria | 7870 |
| 17 | Ga0163163_10012215 | 3300014325 | Bacteria | 7817 |
| 18 | Ga0163163_10012665 | 3300014325 | Bacteria | 7691 |
| 19 | Ga0182008_10000172 | 3300014497 | Bacteria | 50594 |
| 20 | Ga0157379_10003819 | 3300014968 | Bacteria | 12841 |
| 21 | Ga0182007_10000461 | 3300015262 | Bacteria | 24586 |
| 22 | Ga0183367_1019 | 3300015688 | Bacteria | 100516 |
| 23 | Ga0213875_10003591 | 3300021388 | Bacteria | 8785 |
| 24 | Ga0207426_1003000 | 3300025302 | Bacteria | 9822 |
| 25 | Ga0207705_10045103 | 3300025909 | Bacteria | 3169 |
| 26 | Ga0207652_10044801 | 3300025921 | Bacteria | 3770 |
| 27 | Ga0207652_10093224 | 3300025921 | Bacteria | 2650 |
| 28 | Ga0207711_10009483 | 3300025941 | Bacteria | 8120 |
| 29 | Ga0207667_10004519 | 3300025949 | Bacteria | 17046 |
| 30 | Ga0207677_10018116 | 3300026023 | Bacteria | 4220 |
| 31 | Ga0207703_10076814 | 3300026035 | Bacteria | 2771 |
| 32 | Ga0207708_10000029 | 3300026075 | Bacteria | 161861 |
| 33 | Ga0207641_10034598 | 3300026088 | Bacteria | 4204 |
| 34 | Ga0207676_10011061 | 3300026095 | Bacteria | 6439 |
| 35 | Ga0207675_100072970 | 3300026118 | Bacteria | 3210 |
| 36 | Ga0307517_10040897 | 3300028786 | Bacteria | 5028 |
| 37 | Ga0307515_10007489 | 3300028794 | Bacteria | 21571 |
| 38 | Ga0307511_10001379 | 3300030521 | Bacteria | 25696 |
| 39 | Ga0307509_10011783 | 3300031507 | Bacteria | 10537 |
| 40 | Ga0307509_10023239 | 3300031507 | Bacteria | 6969 |
| 41 | Ga0307509_10064941 | 3300031507 | Bacteria | 3836 |
| 42 | Ga0307508_10005713 | 3300031616 | Bacteria | 11778 |
| 43 | Ga0307508_10007254 | 3300031616 | Bacteria | 10326 |
| 44 | Ga0307415_100066427 | 3300032126 | Bacteria | 2517 |
| 45 | Ga0307507_10011411 | 3300033179 | Bacteria | 11216 |
| 46 | Ga0307507_10046591 | 3300033179 | Bacteria | 4247 |
| 47 | Ga0307510_10005529 | 3300033180 | Bacteria | 15067 |
| 48 | Ga0373927_0052846 | 3300035695 | Bacteria | 2627 |
| 49 | Ga0436364_0025257 | 3300037853 | Bacteria | 24124 |
| 50 | Ga0439436_0015874 | 3300041404 | Bacteria | 2262 |
| 51 | Ga0466969_0001918 | 3300044656 | Bacteria | 11119 |
| 52 | Ga0466971_0002817 | 3300044719 | Bacteria | 7364 |
| 53 | Ga0466970_0009003 | 3300044765 | Bacteria | 5035 |
| 54 | Ga0495592_0005084 | 3300046454 | Bacteria | 9689 |
| 55 | Ga0495603_0003219 | 3300046455 | Bacteria | 9721 |
| 56 | Ga0495603_0027486 | 3300046455 | Bacteria | 3433 |
| 57 | Ga0495629_0005909 | 3300046459 | Bacteria | 9120 |
| 58 | Ga0495629_0014987 | 3300046459 | Bacteria | 5569 |
| 59 | Ga0495629_0041983 | 3300046459 | Bacteria | 3215 |
| 60 | Ga0495638_0009644 | 3300046460 | Bacteria | 6753 |
| 61 | Ga0495651_0011562 | 3300046462 | Bacteria | 6780 |
| 62 | Ga0495582_0006976 | 3300046473 | Bacteria | 6283 |
| 63 | Ga0495605_0014167 | 3300046474 | Bacteria | 4374 |
| 64 | Ga0495662_0001014 | 3300046476 | Bacteria | 13787 |
| 65 | Ga0495585_0013456 | 3300046492 | Bacteria | 4787 |
| 66 | Ga0495594_0037979 | 3300046499 | Bacteria | 2628 |
| 67 | Ga0495606_0006677 | 3300046507 | Bacteria | 10577 |
| 68 | Ga0495643_0001509 | 3300046522 | Bacteria | 21031 |
| 69 | Ga0495665_0051379 | 3300046531 | Bacteria | 2183 |
| 70 | Ga0495640_0012505 | 3300046533 | Bacteria | 6481 |
| 71 | Ga0495587_0000377 | 3300046536 | Bacteria | 31781 |
| 72 | Ga0495587_0006046 | 3300046536 | Bacteria | 7892 |
| 73 | Ga0495645_0006556 | 3300046543 | Bacteria | 8086 |
| 74 | Ga0495634_0024306 | 3300046642 | Bacteria | 4252 |
| 75 | Ga0495634_0039408 | 3300046642 | Bacteria | 3217 |
| 76 | Ga0495625_0015190 | 3300046660 | Bacteria | 6110 |
| 77 | Ga0495635_0002367 | 3300046663 | Bacteria | 12835 |
| 78 | Ga0495635_0013531 | 3300046663 | Bacteria | 5710 |
| 79 | Ga0495657_0007581 | 3300046675 | Bacteria | 8376 |
| 80 | Ga0495623_0048253 | 3300046679 | Bacteria | 2701 |
| 81 | Ga0495646_0003443 | 3300046680 | Bacteria | 9846 |
| 82 | Ga0495658_0016924 | 3300046683 | Bacteria | 3758 |
| 83 | Ga0495613_0004196 | 3300046689 | Bacteria | 10785 |
| 84 | Ga0495624_0031599 | 3300046690 | Bacteria | 3440 |
| 85 | Ga0495600_0003342 | 3300046809 | Bacteria | 9427 |
| 86 | Ga0495660_0016933 | 3300046810 | Bacteria | 4197 |
| 87 | Ga0495660_0022500 | 3300046810 | Bacteria | 3599 |
| 88 | Ga0495581_0002867 | 3300047315 | Bacteria | 9849 |
| 89 | Ga0495604_0000345 | 3300047317 | Bacteria | 41594 |
| 90 | Ga0495676_0011170 | 3300047321 | Bacteria | 8114 |
| 91 | Ga0495676_0015765 | 3300047321 | Bacteria | 6716 |
| 92 | Ga0495676_0067344 | 3300047321 | Bacteria | 2770 |
| 93 | Ga0495683_0011664 | 3300047323 | Bacteria | 4624 |
| 94 | Ga0495687_001529 | 3300047443 | Bacteria | 21103 |
| 95 | Ga0495675_0006907 | 3300047444 | Bacteria | 6970 |
| 96 | Ga0495675_0019496 | 3300047444 | Bacteria | 4309 |
| 97 | Ga0495681_0000813 | 3300047470 | Bacteria | 23988 |
| 98 | Ga0495681_0002807 | 3300047470 | Bacteria | 12328 |
| 99 | Ga0495681_0021356 | 3300047470 | Bacteria | 3492 |
| 100 | Ga0495593_0001601 | 3300047673 | Bacteria | 13378 |
| 101 | Ga0495602_0042869 | 3300048088 | Bacteria | 4119 |
| 102 | Ga0495614_0001271 | 3300048089 | Bacteria | 10843 |
| 103 | Ga0495614_0005295 | 3300048089 | Bacteria | 5819 |
| 104 | Ga0495626_0016200 | 3300048091 | Bacteria | 3793 |
| 105 | Ga0496104_0014913 | 3300048907 | Bacteria | 7025 |
| 106 | Ga0496104_0051685 | 3300048907 | Bacteria | 3879 |
| 107 | Ga0496108_0009712 | 3300048911 | Bacteria | 7799 |
| 108 | Ga0496108_0015176 | 3300048911 | Bacteria | 6284 |
| 109 | Ga0496110_0055390 | 3300048913 | Bacteria | 3489 |
| 110 | Ga0496112_0014934 | 3300048915 | Bacteria | 7227 |
| 111 | Ga0501031_0004813 | 3300049568 | Bacteria | 8769 |
| 112 | Ga0501031_0016965 | 3300049568 | Bacteria | 4731 |
| 113 | Ga0501032_0008456 | 3300049569 | Bacteria | 7502 |
| 114 | Ga0501033_0004359 | 3300049570 | Bacteria | 11341 |
| 115 | Ga0501033_0007012 | 3300049570 | Bacteria | 8799 |
| 116 | Ga0501034_0019272 | 3300049571 | Bacteria | 6982 |
| 117 | Ga0501034_0025461 | 3300049571 | Bacteria | 6024 |
| 118 | Ga0501034_0059246 | 3300049571 | Bacteria | 3846 |
| 119 | Ga0501034_0066875 | 3300049571 | Bacteria | 3607 |
| 120 | Ga0501036_0003832 | 3300049572 | Bacteria | 12064 |
| 121 | Ga0501037_0001953 | 3300049573 | Bacteria | 14887 |
| 122 | Ga0501037_0006721 | 3300049573 | Bacteria | 8416 |
| 123 | Ga0501037_0046149 | 3300049573 | Bacteria | 3196 |
| 124 | Ga0501037_0080275 | 3300049573 | Bacteria | 2367 |
| 125 | Ga0501038_0001311 | 3300049574 | Bacteria | 22635 |
| 126 | Ga0501038_0005471 | 3300049574 | Bacteria | 11797 |
| 127 | Ga0501038_0014290 | 3300049574 | Bacteria | 7234 |
| 128 | Ga0501038_0085616 | 3300049574 | Bacteria | 2650 |
| 129 | Ga0501043_0001700 | 3300049579 | Bacteria | 19050 |
| 130 | Ga0501043_0018599 | 3300049579 | Bacteria | 5452 |
| 131 | Ga0501043_0070333 | 3300049579 | Bacteria | 2749 |
| 132 | Ga0501046_0006373 | 3300049580 | Bacteria | 10462 |
| 133 | Ga0501046_0028298 | 3300049580 | Bacteria | 4566 |
| 134 | Ga0501047_0000074 | 3300049581 | Bacteria | 125728 |
| 135 | Ga0501047_0004177 | 3300049581 | Bacteria | 13592 |
| 136 | Ga0501048_0001581 | 3300049582 | Bacteria | 17301 |
| 137 | Ga0501068_0000914 | 3300049584 | Bacteria | 15441 |
| 138 | Ga0501069_0027242 | 3300049585 | Bacteria | 3132 |
| 139 | Ga0501070_0012491 | 3300049586 | Bacteria | 7163 |
| 140 | Ga0501070_0022783 | 3300049586 | Bacteria | 5242 |
| 141 | Ga0501072_0000693 | 3300049588 | Bacteria | 24429 |
| 142 | Ga0501073_0004633 | 3300049589 | Bacteria | 10331 |
| 143 | Ga0501074_0000096 | 3300049590 | Bacteria | 42346 |
| 144 | Ga0501074_0044591 | 3300049590 | Bacteria | 3210 |
| 145 | Ga0501077_0042785 | 3300049593 | Bacteria | 2879 |
| 146 | Ga0501080_0016318 | 3300049742 | Bacteria | 6856 |
| 147 | Ga0501083_0002155 | 3300049744 | Bacteria | 13506 |
| 148 | Ga0501035_0001534 | 3300049822 | Bacteria | 23508 |
| 149 | Ga0501035_0003560 | 3300049822 | Bacteria | 14874 |
| 150 | Ga0501035_0005433 | 3300049822 | Bacteria | 12049 |
| 151 | Ga0501035_0018167 | 3300049822 | Bacteria | 6478 |
| 152 | Ga0501044_0000959 | 3300049823 | Bacteria | 34662 |
| 153 | Ga0501044_0013476 | 3300049823 | Bacteria | 8842 |
| 154 | Ga0501044_0019835 | 3300049823 | Bacteria | 7182 |
| 155 | Ga0501044_0036865 | 3300049823 | Bacteria | 5114 |
| 156 | Ga0501044_0060868 | 3300049823 | Bacteria | 3864 |
| 157 | Ga0501045_0006330 | 3300049824 | Bacteria | 8188 |
| 158 | Ga0495612_0000924 | 3300053078 | Bacteria | 12024 |
| 159 | Ga0500578_0005517 | 3300053086 | Bacteria | 8569 |
| 160 | Ga0500644_0003662 | 3300053088 | Bacteria | 3814 |
| 161 | Ga0500654_015775 | 3300053099 | Bacteria | 4982 |
| 162 | Ga0500560_008530 | 3300053107 | Bacteria | 2473 |
| 163 | Ga0500658_0006593 | 3300053134 | Bacteria | 4305 |
| 164 | Ga0500561_0000837 | 3300053137 | Bacteria | 4921 |
| 165 | Ga0500600_0005069 | 3300053149 | Bacteria | 7757 |
| 166 | Ga0500633_0001505 | 3300053160 | Bacteria | 4426 |
| 167 | Ga0500587_000141 | 3300053739 | Bacteria | 6863 |
| 168 | Ga0501082_0008642 | 3300060353 | Bacteria | 8781 |
| 169 | Ga0466962_0011711 | 3300061719 | Bacteria | 4222 |
| 170 | 2554255855 | 2554235005 | Bacteria | 6457341 |
| 171 | 2616905115 | 2616644941 | Bacteria | 8510691 |
| 172 | 2644016371 | 2643221601 | Bacteria | 7493239 |
| 173 | 2644174665 | 2643221631 | Bacteria | 8168043 |
| 174 | 2644388457 | 2643221670 | Bacteria | 6497041 |
| 175 | 2644626448 | 2643221714 | Bacteria | 9015452 |
| 176 | 2729909542 | 2728369276 | Bacteria | 5610032 |
| 177 | 2768646426 | 2767802112 | Bacteria | 6465194 |
| 178 | 2784590793 | 2784132148 | Bacteria | 8627943 |
| 179 | 2785340763 | 2784746763 | Bacteria | 9783172 |
| 180 | 2793975340 | 2791355406 | Bacteria | 11364898 |
| 181 | 2809234542 | 2808606448 | Bacteria | 8656184 |
| 182 | 2819697712 | 2818991463 | Bacteria | 7948711 |
| 183 | 2819740334 | 2818991472 | Bacteria | 10089953 |
| 184 | 2862284174 | 2862281513 | Bacteria | 9621493 |
| 185 | 2867374229 | 2867369537 | Bacteria | 6501581 |
| 186 | 2867477951 | 2867475112 | Bacteria | 6909112 |
| 187 | 2873153662 | 2873151551 | Bacteria | 8625867 |
| 188 | 2875397153 | 2875391855 | Bacteria | 7600475 |
| 189 | 2912717151 | 2912715099 | Bacteria | 9460473 |
| 190 | 2912729738 | 2912723979 | Bacteria | 8557534 |
| 191 | 2946047407 | 2946045630 | Bacteria | 8527308 |
| 192 | 2946078159 | 2946072368 | Bacteria | 8999607 |
| 193 | 2954010646 | 2954002825 | Bacteria | 9173742 |
| 194 | 2990049284 | 2990044586 | Bacteria | 6603797 |
| 195 | 2990089877 | 2990088156 | Bacteria | 6657676 |
| 196 | 2997602624 | 2997600082 | Bacteria | 9896405 |
| 197 | 3003001239 | 3002998708 | Bacteria | 11715108 |
| 198 | 3006326124 | 3006321560 | Bacteria | 8247479 |
| 199 | 3006399241 | 3006393351 | Bacteria | 6615579 |
| 200 | 3006426183 | 3006425503 | Bacteria | 6491253 |
| 201 | 8008490120 | 8008485437 | Bacteria | 7198341 |
| 202 | 8023628481 | 8023623736 | Bacteria | 8593882 |
| 203 | 8025479379 | 8025478263 | Bacteria | 8209203 |
| 204 | 8025529147 | 8025524527 | Bacteria | 7197316 |
| 205 | 8033688499 | 8033684223 | Bacteria | 6906479 |
| 206 | 8047895658 | 8047893842 | Bacteria | 11723082 |
| 207 | 8048129995 | 8048127548 | Bacteria | 11053136 |
| 208 | 8048363281 | 8048356638 | Bacteria | 11044339 |
| 209 | 8048372682 | 8048369669 | Bacteria | 11666822 |
| 210 | 8048381616 | 8048379754 | Bacteria | 11877923 |
| 211 | 8048408741 | 8048406513 | Bacteria | 8936924 |
| 212 | 8054164056 | 8054160619 | Bacteria | 7783213 |
| 213 | 8056453388 | 8056447290 | Bacteria | 7680491 |
| 214 | 8056669836 | 8056667051 | Bacteria | 6953971 |
| 215 | Ga0495604_0011659 | |||
| 216 | JGI25160J50197_1011779 | |||
| 217 | Ga0068868_100028833 | |||
| 218 | Ga0070714_100008533 | |||
| 219 | Ga0070700_100000049 | |||
| 220 | Ga0070706_100048306 | |||
| 221 | Ga0068864_100026623 | |||
| 222 | Ga0068863_100006693 | |||
| 223 | Ga0068863_100096763 | |||
| 224 | Ga0081455_10044357 | |||
| 225 | Ga0075363_100017237 | |||
| 226 | Ga0075367_10000789 | |||
| 227 | Ga0099794_10022328 | |||
| 228 | Ga0105248_10013120 | |||
| 229 | Ga0157374_10032466 | |||
| 230 | Ga0163163_10012044 | |||
| 231 | Ga0163163_10012215 | |||
| 232 | Ga0163163_10012665 | |||
| 233 | Ga0182008_10000172 | |||
| 234 | Ga0157379_10003819 | |||
| 235 | Ga0182007_10000461 | |||
| 236 | Ga0183367_1019 | |||
| 237 | Ga0213875_10003591 | |||
| 238 | Ga0207426_1003000 | |||
| 239 | Ga0207705_10045103 | |||
| 240 | Ga0207652_10044801 | |||
| 241 | Ga0207652_10093224 | |||
| 242 | Ga0207711_10009483 | |||
| 243 | Ga0207667_10004519 | |||
| 244 | Ga0207677_10018116 | |||
| 245 | Ga0207703_10076814 | |||
| 246 | Ga0207708_10000029 | |||
| 247 | Ga0207641_10034598 | |||
| 248 | Ga0207676_10011061 | |||
| 249 | Ga0207675_100072970 | |||
| 250 | Ga0307517_10040897 | |||
| 251 | Ga0307515_10007489 | |||
| 252 | Ga0307511_10001379 | |||
| 253 | Ga0307509_10011783 | |||
| 254 | Ga0307509_10023239 | |||
| 255 | Ga0307509_10064941 | |||
| 256 | Ga0307508_10005713 | |||
| 257 | Ga0307508_10007254 | |||
| 258 | Ga0307415_100066427 | |||
| 259 | Ga0307507_10011411 | |||
| 260 | Ga0307507_10046591 | |||
| 261 | Ga0307510_10005529 | |||
| 262 | Ga0373927_0052846 | |||
| 263 | Ga0436364_0025257 | |||
| 264 | Ga0439436_0015874 | |||
| 265 | Ga0466969_0001918 | |||
| 266 | Ga0466971_0002817 | |||
| 267 | Ga0466970_0009003 | |||
| 268 | Ga0495592_0005084 | |||
| 269 | Ga0495603_0003219 | |||
| 270 | Ga0495603_0027486 | |||
| 271 | Ga0495629_0005909 | |||
| 272 | Ga0495629_0014987 | |||
| 273 | Ga0495629_0041983 | |||
| 274 | Ga0495638_0009644 | |||
| 275 | Ga0495651_0011562 | |||
| 276 | Ga0495582_0006976 | |||
| 277 | Ga0495605_0014167 | |||
| 278 | Ga0495662_0001014 | |||
| 279 | Ga0495585_0013456 | |||
| 280 | Ga0495594_0037979 | |||
| 281 | Ga0495606_0006677 | |||
| 282 | Ga0495643_0001509 | |||
| 283 | Ga0495665_0051379 | |||
| 284 | Ga0495640_0012505 | |||
| 285 | Ga0495587_0000377 | |||
| 286 | Ga0495587_0006046 | |||
| 287 | Ga0495645_0006556 | |||
| 288 | Ga0495634_0024306 | |||
| 289 | Ga0495634_0039408 | |||
| 290 | Ga0495625_0015190 | |||
| 291 | Ga0495635_0002367 | |||
| 292 | Ga0495635_0013531 | |||
| 293 | Ga0495657_0007581 | |||
| 294 | Ga0495623_0048253 | |||
| 295 | Ga0495646_0003443 | |||
| 296 | Ga0495658_0016924 | |||
| 297 | Ga0495613_0004196 | |||
| 298 | Ga0495624_0031599 | |||
| 299 | Ga0495600_0003342 | |||
| 300 | Ga0495660_0016933 | |||
| 301 | Ga0495660_0022500 | |||
| 302 | Ga0495581_0002867 | |||
| 303 | Ga0495604_0000345 | |||
| 304 | Ga0495676_0011170 | |||
| 305 | Ga0495676_0015765 | |||
| 306 | Ga0495676_0067344 | |||
| 307 | Ga0495683_0011664 | |||
| 308 | Ga0495687_001529 | |||
| 309 | Ga0495675_0006907 | |||
| 310 | Ga0495675_0019496 | |||
| 311 | Ga0495681_0000813 | |||
| 312 | Ga0495681_0002807 | |||
| 313 | Ga0495681_0021356 | |||
| 314 | Ga0495593_0001601 | |||
| 315 | Ga0495602_0042869 | |||
| 316 | Ga0495614_0001271 | |||
| 317 | Ga0495614_0005295 | |||
| 318 | Ga0495626_0016200 | |||
| 319 | Ga0496104_0014913 | |||
| 320 | Ga0496104_0051685 | |||
| 321 | Ga0496108_0009712 | |||
| 322 | Ga0496108_0015176 | |||
| 323 | Ga0496110_0055390 | |||
| 324 | Ga0496112_0014934 | |||
| 325 | Ga0501031_0004813 | |||
| 326 | Ga0501031_0016965 | |||
| 327 | Ga0501032_0008456 | |||
| 328 | Ga0501033_0004359 | |||
| 329 | Ga0501033_0007012 | |||
| 330 | Ga0501034_0019272 | |||
| 331 | Ga0501034_0025461 | |||
| 332 | Ga0501034_0059246 | |||
| 333 | Ga0501034_0066875 | |||
| 334 | Ga0501036_0003832 | |||
| 335 | Ga0501037_0001953 | |||
| 336 | Ga0501037_0006721 | |||
| 337 | Ga0501037_0046149 | |||
| 338 | Ga0501037_0080275 | |||
| 339 | Ga0501038_0001311 | |||
| 340 | Ga0501038_0005471 | |||
| 341 | Ga0501038_0014290 | |||
| 342 | Ga0501038_0085616 | |||
| 343 | Ga0501043_0001700 | |||
| 344 | Ga0501043_0018599 | |||
| 345 | Ga0501043_0070333 | |||
| 346 | Ga0501046_0006373 | |||
| 347 | Ga0501046_0028298 | |||
| 348 | Ga0501047_0000074 | |||
| 349 | Ga0501047_0004177 | |||
| 350 | Ga0501048_0001581 | |||
| 351 | Ga0501068_0000914 | |||
| 352 | Ga0501069_0027242 | |||
| 353 | Ga0501070_0012491 | |||
| 354 | Ga0501070_0022783 | |||
| 355 | Ga0501072_0000693 | |||
| 356 | Ga0501073_0004633 | |||
| 357 | Ga0501074_0000096 | |||
| 358 | Ga0501074_0044591 | |||
| 359 | Ga0501077_0042785 | |||
| 360 | Ga0501080_0016318 | |||
| 361 | Ga0501083_0002155 | |||
| 362 | Ga0501035_0001534 | |||
| 363 | Ga0501035_0003560 | |||
| 364 | Ga0501035_0005433 | |||
| 365 | Ga0501035_0018167 | |||
| 366 | Ga0501044_0000959 | |||
| 367 | Ga0501044_0013476 | |||
| 368 | Ga0501044_0019835 | |||
| 369 | Ga0501044_0036865 | |||
| 370 | Ga0501044_0060868 | |||
| 371 | Ga0501045_0006330 | |||
| 372 | Ga0495612_0000924 | |||
| 373 | Ga0500578_0005517 | |||
| 374 | Ga0500644_0003662 | |||
| 375 | Ga0500654_015775 | |||
| 376 | Ga0500560_008530 | |||
| 377 | Ga0500658_0006593 | |||
| 378 | Ga0500561_0000837 | |||
| 379 | Ga0500600_0005069 | |||
| 380 | Ga0500633_0001505 | |||
| 381 | Ga0500587_000141 | |||
| 382 | Ga0501082_0008642 | |||
| 383 | Ga0466962_0011711 | |||
| 384 | 2554255855 | |||
| 385 | 2616905115 | |||
| 386 | 2644016371 | |||
| 387 | 2644174665 | |||
| 388 | 2644388457 | |||
| 389 | 2644626448 | |||
| 390 | 2729909542 | |||
| 391 | 2768646426 | |||
| 392 | 2784590793 | |||
| 393 | 2785340763 | |||
| 394 | 2793975340 | |||
| 395 | 2809234542 | |||
| 396 | 2819697712 | |||
| 397 | 2819740334 | |||
| 398 | 2862284174 | |||
| 399 | 2867374229 | |||
| 400 | 2867477951 | |||
| 401 | 2873153662 | |||
| 402 | 2875397153 | |||
| 403 | 2912717151 | |||
| 404 | 2912729738 | |||
| 405 | 2946047407 | |||
| 406 | 2946078159 | |||
| 407 | 2954010646 | |||
| 408 | 2990049284 | |||
| 409 | 2990089877 | |||
| 410 | 2997602624 | |||
| 411 | 3003001239 | |||
| 412 | 3006326124 | |||
| 413 | 3006399241 | |||
| 414 | 3006426183 | |||
| 415 | 8008490120 | |||
| 416 | 8023628481 | |||
| 417 | 8025479379 | |||
| 418 | 8025529147 | |||
| 419 | 8033688499 | |||
| 420 | 8047895658 | |||
| 421 | 8048129995 | |||
| 422 | 8048363281 | |||
| 423 | 8048372682 | |||
| 424 | 8048381616 | |||
| 425 | 8048408741 | |||
| 426 | 8054164056 | |||
| 427 | 8056453388 | |||
| 428 | 8056669836 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4tmu-assembly1.cif.gz_A | crystal structure of recq catalytic core from c. sakazakii bound to dna | 0.8827 | 1 | 488 |
| 1oyy-assembly1.cif.gz_A | structure of the recq catalytic core bound to atp-gamma-s | 0.8777 | 10 | 488 |
| 1oyw-assembly1.cif.gz_A | structure of the recq catalytic core | 0.8749 | 6 | 488 |
| 7aud-assembly5.cif.gz_D | structure of an engineered helicase domain construct for human bloom syndrome protein (blm) | 0.8509 | 14 | 488 |
| 2jgn-assembly2.cif.gz_B | ddx3 helicase domain | 0.8465 | 219 | 369 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_K7N5A0_462_588_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9343 | 252 | 353 | 3.40.50.300 |
| af_Q9FT69_484_600_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9268 | 250 | 353 | 3.40.50.300 |
| af_A4HT33_342_465_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9107 | 233 | 341 | 3.40.50.300 |
| af_A0A0P0XCD9_496_590_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8913 | 233 | 308 | 3.40.50.300 |
| af_A4HZF8_335_514_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8846 | 225 | 354 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1F0PGB3-F1-model_v4 | ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ) | 0.9528 | 1 | 721 |
GO:0003676
GO:0005524 GO:0005737 GO:0006281 GO:0006310 GO:0009378 GO:0016787 GO:0030894 GO:0043138 GO:0043590 |
| AF-A0A1F0PGB3-F1-model_v4 | ATP-dependent DNA helicase RecQ (EC 5.6.2.4) (DNA 3'-5' helicase RecQ) | 0.9412 | 1 | 721 |
GO:0003676
GO:0005524 GO:0005737 GO:0006281 GO:0006310 GO:0009378 GO:0016787 GO:0030894 GO:0043138 GO:0043590 |
| AF-A0A6B9F6Y4-F1-model_v4 | DNA 3'-5' helicase (EC 5.6.2.4) | 0.9303 | 7 | 721 |
GO:0003676
GO:0005524 GO:0005737 GO:0006281 GO:0006310 GO:0009378 GO:0016787 GO:0030894 GO:0036121 GO:0061749 GO:1990518 |
| AF-A0A812ZHT8-F1-model_v4 | deleted | 0.9264 | 1 | 719 |
|
| AF-A0A522YG38-F1-model_v4 | deleted | 0.9172 | 7 | 402 |
|