F325569

General Info

Members Datasets Scaffolds Average Seq Length
214 157 428 154

Family's Representative Sequence

Representative Sequence 3300046462|Ga0495651_0520571|Ga0495651_0520571_41_601
Length 186
Sequence LDDAGRRAPHRRLHLPEEHAVTNPSSNQIEPTKLTQATHERLVAELEDLTTRGRVEIAQQIEAARALGDLSENGDYHAAKDAQGKMESRIRQLQALLKNVELVDASGANDGSVSLGSTVTLRYDGDDEDEAQQFFVGSIEERQGDLHVISPSSPLGQVLIGRGAGDSVEYQAPGGMLKVHIMAVER

Samples

Sample ID Description Type Environment
1 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
41 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
53 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
55 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
58 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
64 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
65 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
66 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
67 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
68 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
69 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
70 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
71 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
72 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
73 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
74 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
75 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
76 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
77 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
78 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
79 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
80 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
85 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
86 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
87 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
88 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
89 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
90 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
91 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
92 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
93 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
94 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
95 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
96 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
97 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
103 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
104 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
105 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
108 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
131 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
132 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
142 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
143 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
144 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
145 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
150 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
151 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
152 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
153 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.07
Metatranscriptomes 0.93
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.07
Nodule 0
Rhizoplane 2.8
Rhizosphere 85.51
Stem 0
Stem Tuber 0
Unclassified 2.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495651_0520571 3300046462 Unclassified 759
2 JGI25405J52794_10059753 3300003911 Bacteria 823
3 Ga0070670_101491414 3300005331 Bacteria 621
4 Ga0070680_100352355 3300005336 Bacteria 1252
5 Ga0068868_100282999 3300005338 Bacteria 1404
6 Ga0070671_100000584 3300005355 Bacteria 25993
7 Ga0070713_100710464 3300005436 Bacteria 960
8 Ga0070700_101549455 3300005441 Bacteria 565
9 Ga0068867_100906323 3300005459 Bacteria 794
10 Ga0068867_101520276 3300005459 Bacteria 624
11 Ga0068853_101131523 3300005539 Bacteria 755
12 Ga0070695_101462309 3300005545 Bacteria 568
13 Ga0070696_100885233 3300005546 Bacteria 740
14 Ga0068856_100268532 3300005614 Bacteria 1722
15 Ga0070702_101367342 3300005615 Bacteria 578
16 Ga0068852_100735711 3300005616 Bacteria 998
17 Ga0068858_100026510 3300005842 Bacteria 5383
18 Ga0068858_101531471 3300005842 Bacteria 658
19 Ga0081455_10002536 3300005937 Bacteria 21700
20 Ga0081455_10008810 3300005937 Bacteria 10441
21 Ga0081538_10000101 3300005981 Bacteria 83888
22 Ga0081538_10052902 3300005981 Bacteria 2421
23 Ga0075365_10167962 3300006038 Bacteria 1531
24 Ga0075363_100140032 3300006048 Bacteria 1362
25 Ga0075364_10077549 3300006051 Bacteria 2194
26 Ga0075364_10150984 3300006051 Bacteria 1566
27 Ga0075428_100583401 3300006844 Bacteria 1194
28 Ga0075430_100122968 3300006846 Bacteria 2164
29 Ga0075431_100159688 3300006847 Bacteria 2318
30 Ga0111539_10744870 3300009094 Bacteria 1140
31 Ga0111539_11030789 3300009094 Bacteria 956
32 Ga0105245_10033743 3300009098 Bacteria 4536
33 Ga0105245_10046792 3300009098 Bacteria 3866
34 Ga0105245_10348740 3300009098 Bacteria 1466
35 Ga0105245_11031456 3300009098 Bacteria 868
36 Ga0105245_12842918 3300009098 Bacteria 536
37 Ga0105245_13105057 3300009098 Bacteria 515
38 Ga0105243_11150475 3300009148 Bacteria 787
39 Ga0105241_10643759 3300009174 Bacteria 962
40 Ga0105242_10257513 3300009176 Bacteria 1575
41 Ga0105242_10753166 3300009176 Bacteria 959
42 Ga0157369_10168709 3300013105 Bacteria 2307
43 Ga0157378_10050180 3300013297 Bacteria 3713
44 Ga0157378_11322440 3300013297 Bacteria 762
45 Ga0163162_10615580 3300013306 Bacteria 1211
46 Ga0157372_11272842 3300013307 Bacteria 849
47 Ga0157375_12338303 3300013308 Bacteria 637
48 Ga0163163_10985456 3300014325 Bacteria 906
49 Ga0157376_12321741 3300014969 Bacteria 576
50 Ga0206356_10778298 3300020070 Bacteria 705
51 Ga0213873_10016514 3300021358 Bacteria 1670
52 Ga0213875_10025972 3300021388 Bacteria 2788
53 Ga0213875_10263693 3300021388 Bacteria 813
54 Ga0224572_1010503 3300024225 Bacteria 1742
55 Ga0207654_10396933 3300025911 Bacteria 958
56 Ga0207660_10661908 3300025917 Bacteria 852
57 Ga0207646_10401671 3300025922 Bacteria 1237
58 Ga0207681_10838748 3300025923 Bacteria 769
59 Ga0207650_11610074 3300025925 Bacteria 551
60 Ga0207687_10019107 3300025927 Bacteria 4536
61 Ga0207687_10028858 3300025927 Bacteria 3729
62 Ga0207687_10195847 3300025927 Bacteria 1576
63 Ga0207687_10350217 3300025927 Bacteria 1203
64 Ga0207690_10977129 3300025932 Bacteria 704
65 Ga0207651_11364320 3300025960 Bacteria 638
66 Ga0207668_10694790 3300025972 Bacteria 894
67 Ga0207677_10450133 3300026023 Bacteria 1103
68 Ga0207703_10018745 3300026035 Bacteria 5405
69 Ga0265336_10003200 3300028666 Bacteria 6500
70 Ga0265770_1010972 3300030878 Bacteria 1323
71 Ga0265327_10000252 3300031251 Bacteria 106339
72 Ga0265327_10001004 3300031251 Bacteria 40033
73 Ga0265327_10184671 3300031251 Bacteria 952
74 Ga0316579_10023393 3300031691 Bacteria 2773
75 Ga0265314_10257694 3300031711 Bacteria 998
76 Ga0316578_10047250 3300031728 Bacteria 2511
77 Ga0307413_10423945 3300031824 Bacteria 1049
78 Ga0307410_10102117 3300031852 Bacteria 2057
79 Ga0307410_10202669 3300031852 Bacteria 1516
80 Ga0307410_10323171 3300031852 Bacteria 1225
81 Ga0307407_10144186 3300031903 Bacteria 1540
82 Ga0307409_100030692 3300031995 Bacteria 3866
83 Ga0307409_100117876 3300031995 Bacteria 2241
84 Ga0307416_100076871 3300032002 Bacteria 2801
85 Ga0307416_101479340 3300032002 Bacteria 785
86 Ga0307416_101782107 3300032002 Bacteria 720
87 Ga0307415_100221412 3300032126 Bacteria 1517
88 Ga0373930_0000903 3300034816 Bacteria 4245
89 Ga0373948_0009803 3300034817 Bacteria 1660
90 Ga0373928_0040396 3300035084 Bacteria 1069
91 Ga0373929_0002402 3300035085 Bacteria 3439
92 Ga0373949_0115074 3300035090 Bacteria 750
93 Ga0373932_0000028 3300035112 Bacteria 40756
94 Ga0373932_0061070 3300035112 Bacteria 1145
95 Ga0373954_0140512 3300035118 Bacteria 1178
96 Ga0373960_0252715 3300035121 Bacteria 641
97 Ga0373943_0014013 3300035170 Bacteria 3625
98 Ga0373946_0029165 3300035171 Bacteria 2194
99 Ga0373961_0028720 3300035241 Bacteria 1535
100 Ga0316574_0266701 3300035398 Bacteria 1092
101 Ga0373931_0000013 3300035691 Bacteria 266932
102 Ga0373931_0000469 3300035691 Bacteria 16516
103 Ga0373927_0006467 3300035695 Bacteria 7982
104 Ga0373937_0101832 3300036401 Bacteria 2666
105 Ga0316582_0539487 3300036647 Bacteria 804
106 Ga0316584_0005331 3300036712 Bacteria 8615
107 Ga0316584_0056996 3300036712 Bacteria 2925
108 Ga0395900_0495388 3300037418 Bacteria 1173
109 Ga0436364_0651763 3300037853 Bacteria 653
110 Ga0436364_0905413 3300037853 Bacteria 1084
111 Ga0436365_0485917 3300039437 Bacteria 6120
112 Ga0436365_1058428 3300039437 Bacteria 904
113 Ga0436365_1670486 3300039437 Bacteria 945
114 Ga0436360_0035530 3300039438 Bacteria 1094
115 Ga0436360_0315016 3300039438 Bacteria 626
116 Ga0436360_1363410 3300039438 Bacteria 754
117 Ga0436363_1091267 3300039450 Bacteria 1004
118 Ga0436363_1393786 3300039450 Bacteria 724
119 Ga0436363_1516004 3300039450 Bacteria 1112
120 Ga0436362_0899616 3300039453 Bacteria 4496
121 Ga0439438_054063 3300041405 Unclassified 1015
122 Ga0451835_1151255 3300041492 Bacteria 905
123 Ga0451853_1376411 3300041512 Bacteria 1261
124 Ga0439450_001653 3300042008 Bacteria 3322
125 Ga0439451_030967 3300042009 Bacteria 1075
126 Ga0439455_0070192 3300042012 Bacteria 940
127 Ga0439456_136215 3300042013 Bacteria 568
128 Ga0439463_004587 3300042016 Bacteria 3459
129 Ga0439444_0045523 3300042437 Bacteria 876
130 Ga0439464_0004360 3300042439 Bacteria 3618
131 Ga0439460_0126232 3300042461 Bacteria 840
132 Ga0451577_0008740 3300042876 Bacteria 9820
133 Ga0451577_0858700 3300042876 Bacteria 818
134 Ga0439440_0001727 3300042993 Bacteria 4019
135 Ga0466963_0759749 3300044694 Bacteria 684
136 Ga0453684_0017988 3300044712 Bacteria 10885
137 Ga0466958_0331325 3300045836 Bacteria 979
138 Ga0495653_0079365 3300046463 Bacteria 2431
139 Ga0495628_0366012 3300046516 Bacteria 1058
140 Ga0495630_0129033 3300046517 Bacteria 1920
141 Ga0495630_0288868 3300046517 Bacteria 1253
142 Ga0495634_0252926 3300046642 Unclassified 1077
143 Ga0495657_0258338 3300046675 Bacteria 1047
144 Ga0495646_0405765 3300046680 Bacteria 708
145 Ga0495613_0164281 3300046689 Bacteria 1578
146 Ga0495676_0755605 3300047321 Bacteria 627
147 Ga0495684_0204147 3300047471 Bacteria 1456
148 Ga0496104_0276636 3300048907 Bacteria 1592
149 Ga0496105_0669841 3300048908 Bacteria 799
150 Ga0496108_0685439 3300048911 Bacteria 889
151 Ga0496109_1029267 3300048912 Bacteria 761
152 Ga0496114_0191798 3300048917 Bacteria 1788
153 Ga0496114_1030050 3300048917 Bacteria 707
154 Ga0501033_0002744 3300049570 Bacteria 14765
155 Ga0501034_0007575 3300049571 Bacteria 11553
156 Ga0501034_1373602 3300049571 Bacteria 582
157 Ga0501036_0005433 3300049572 Bacteria 10328
158 Ga0501037_0343562 3300049573 Bacteria 1031
159 Ga0501038_0035180 3300049574 Bacteria 4399
160 Ga0501039_0010654 3300049575 Bacteria 7005
161 Ga0501040_0008219 3300049576 Bacteria 6785
162 Ga0501040_0047299 3300049576 Bacteria 2939
163 Ga0501040_0760987 3300049576 Unclassified 701
164 Ga0501041_0210820 3300049577 Bacteria 1218
165 Ga0501041_0356970 3300049577 Archaea 924
166 Ga0501042_0012597 3300049578 Bacteria 5734
167 Ga0501042_0576035 3300049578 Bacteria 818
168 Ga0501043_0361456 3300049579 Bacteria 1102
169 Ga0501046_0004605 3300049580 Bacteria 12454
170 Ga0501047_0157748 3300049581 Bacteria 2142
171 Ga0501048_0047549 3300049582 Bacteria 3062
172 Ga0501067_0477569 3300049583 Bacteria 697
173 Ga0501067_0696073 3300049583 Bacteria 571
174 Ga0501068_0490075 3300049584 Bacteria 797
175 Ga0501071_0047532 3300049587 Bacteria 3083
176 Ga0501071_0357986 3300049587 Bacteria 1111
177 Ga0501072_0008185 3300049588 Bacteria 7937
178 Ga0501074_0070039 3300049590 Bacteria 2522
179 Ga0501074_0922856 3300049590 Bacteria 614
180 Ga0501075_0007646 3300049591 Bacteria 7498
181 Ga0501075_0804738 3300049591 Bacteria 715
182 Ga0501076_0012462 3300049592 Bacteria 6358
183 Ga0501076_0107517 3300049592 Bacteria 2253
184 Ga0501077_0014275 3300049593 Bacteria 4989
185 Ga0501077_0429664 3300049593 Bacteria 845
186 Ga0501079_0012408 3300049741 Bacteria 6502
187 Ga0501079_0487002 3300049741 Bacteria 969
188 Ga0501081_0036270 3300049743 Bacteria 3362
189 Ga0501081_0460425 3300049743 Bacteria 945
190 Ga0501035_0473351 3300049822 Bacteria 1034
191 Ga0501035_1566364 3300049822 Bacteria 501
192 Ga0501045_0010712 3300049824 Bacteria 6428
193 nmdc:mga03683_493462_c1 3300050489 Bacteria 592
194 nmdc:mga03n38_471495_c1 3300050490 Bacteria 701
195 nmdc:mga00v17_195595_c1 3300050491 Bacteria 1307
196 nmdc:mga00v17_911307_c1 3300050491 Bacteria 556
197 nmdc:mga0yw44_40435_c1 3300050492 Bacteria 2770
198 nmdc:mga0qj67_169906_c1 3300050509 Bacteria 1770
199 nmdc:mga08y16_1074624_c1 3300050511 Bacteria 781
200 nmdc:mga08y16_574146_c1 3300050511 Bacteria 1139
201 Ga0495601_0568305 3300053077 Bacteria 729
202 Ga0500635_0002035 3300053080 Bacteria 4942
203 Ga0495595_0003552 3300053084 Bacteria 6187
204 Ga0495619_0027713 3300053085 Bacteria 3652
205 Ga0495619_0118802 3300053085 Bacteria 1812
206 Ga0495619_0559209 3300053085 Bacteria 784
207 Ga0500566_0001426 3300053094 Bacteria 13990
208 Ga0500568_0030323 3300053139 Bacteria 2240
209 Ga0500616_0000201 3300053153 Bacteria 97711
210 Ga0501084_0027559 3300054114 Bacteria 4747
211 Ga0501084_1353100 3300054114 Bacteria 597
212 Ga0501082_0010396 3300060353 Bacteria 8014
213 Ga0501082_0998081 3300060353 Unclassified 732
214 Ga0530510_0023114 3300061734 Bacteria 4427
215 Ga0495651_0520571
216 JGI25405J52794_10059753
217 Ga0070670_101491414
218 Ga0070680_100352355
219 Ga0068868_100282999
220 Ga0070671_100000584
221 Ga0070713_100710464
222 Ga0070700_101549455
223 Ga0068867_100906323
224 Ga0068867_101520276
225 Ga0068853_101131523
226 Ga0070695_101462309
227 Ga0070696_100885233
228 Ga0068856_100268532
229 Ga0070702_101367342
230 Ga0068852_100735711
231 Ga0068858_100026510
232 Ga0068858_101531471
233 Ga0081455_10002536
234 Ga0081455_10008810
235 Ga0081538_10000101
236 Ga0081538_10052902
237 Ga0075365_10167962
238 Ga0075363_100140032
239 Ga0075364_10077549
240 Ga0075364_10150984
241 Ga0075428_100583401
242 Ga0075430_100122968
243 Ga0075431_100159688
244 Ga0111539_10744870
245 Ga0111539_11030789
246 Ga0105245_10033743
247 Ga0105245_10046792
248 Ga0105245_10348740
249 Ga0105245_11031456
250 Ga0105245_12842918
251 Ga0105245_13105057
252 Ga0105243_11150475
253 Ga0105241_10643759
254 Ga0105242_10257513
255 Ga0105242_10753166
256 Ga0157369_10168709
257 Ga0157378_10050180
258 Ga0157378_11322440
259 Ga0163162_10615580
260 Ga0157372_11272842
261 Ga0157375_12338303
262 Ga0163163_10985456
263 Ga0157376_12321741
264 Ga0206356_10778298
265 Ga0213873_10016514
266 Ga0213875_10025972
267 Ga0213875_10263693
268 Ga0224572_1010503
269 Ga0207654_10396933
270 Ga0207660_10661908
271 Ga0207646_10401671
272 Ga0207681_10838748
273 Ga0207650_11610074
274 Ga0207687_10019107
275 Ga0207687_10028858
276 Ga0207687_10195847
277 Ga0207687_10350217
278 Ga0207690_10977129
279 Ga0207651_11364320
280 Ga0207668_10694790
281 Ga0207677_10450133
282 Ga0207703_10018745
283 Ga0265336_10003200
284 Ga0265770_1010972
285 Ga0265327_10000252
286 Ga0265327_10001004
287 Ga0265327_10184671
288 Ga0316579_10023393
289 Ga0265314_10257694
290 Ga0316578_10047250
291 Ga0307413_10423945
292 Ga0307410_10102117
293 Ga0307410_10202669
294 Ga0307410_10323171
295 Ga0307407_10144186
296 Ga0307409_100030692
297 Ga0307409_100117876
298 Ga0307416_100076871
299 Ga0307416_101479340
300 Ga0307416_101782107
301 Ga0307415_100221412
302 Ga0373930_0000903
303 Ga0373948_0009803
304 Ga0373928_0040396
305 Ga0373929_0002402
306 Ga0373949_0115074
307 Ga0373932_0000028
308 Ga0373932_0061070
309 Ga0373954_0140512
310 Ga0373960_0252715
311 Ga0373943_0014013
312 Ga0373946_0029165
313 Ga0373961_0028720
314 Ga0316574_0266701
315 Ga0373931_0000013
316 Ga0373931_0000469
317 Ga0373927_0006467
318 Ga0373937_0101832
319 Ga0316582_0539487
320 Ga0316584_0005331
321 Ga0316584_0056996
322 Ga0395900_0495388
323 Ga0436364_0651763
324 Ga0436364_0905413
325 Ga0436365_0485917
326 Ga0436365_1058428
327 Ga0436365_1670486
328 Ga0436360_0035530
329 Ga0436360_0315016
330 Ga0436360_1363410
331 Ga0436363_1091267
332 Ga0436363_1393786
333 Ga0436363_1516004
334 Ga0436362_0899616
335 Ga0439438_054063
336 Ga0451835_1151255
337 Ga0451853_1376411
338 Ga0439450_001653
339 Ga0439451_030967
340 Ga0439455_0070192
341 Ga0439456_136215
342 Ga0439463_004587
343 Ga0439444_0045523
344 Ga0439464_0004360
345 Ga0439460_0126232
346 Ga0451577_0008740
347 Ga0451577_0858700
348 Ga0439440_0001727
349 Ga0466963_0759749
350 Ga0453684_0017988
351 Ga0466958_0331325
352 Ga0495653_0079365
353 Ga0495628_0366012
354 Ga0495630_0129033
355 Ga0495630_0288868
356 Ga0495634_0252926
357 Ga0495657_0258338
358 Ga0495646_0405765
359 Ga0495613_0164281
360 Ga0495676_0755605
361 Ga0495684_0204147
362 Ga0496104_0276636
363 Ga0496105_0669841
364 Ga0496108_0685439
365 Ga0496109_1029267
366 Ga0496114_0191798
367 Ga0496114_1030050
368 Ga0501033_0002744
369 Ga0501034_0007575
370 Ga0501034_1373602
371 Ga0501036_0005433
372 Ga0501037_0343562
373 Ga0501038_0035180
374 Ga0501039_0010654
375 Ga0501040_0008219
376 Ga0501040_0047299
377 Ga0501040_0760987
378 Ga0501041_0210820
379 Ga0501041_0356970
380 Ga0501042_0012597
381 Ga0501042_0576035
382 Ga0501043_0361456
383 Ga0501046_0004605
384 Ga0501047_0157748
385 Ga0501048_0047549
386 Ga0501067_0477569
387 Ga0501067_0696073
388 Ga0501068_0490075
389 Ga0501071_0047532
390 Ga0501071_0357986
391 Ga0501072_0008185
392 Ga0501074_0070039
393 Ga0501074_0922856
394 Ga0501075_0007646
395 Ga0501075_0804738
396 Ga0501076_0012462
397 Ga0501076_0107517
398 Ga0501077_0014275
399 Ga0501077_0429664
400 Ga0501079_0012408
401 Ga0501079_0487002
402 Ga0501081_0036270
403 Ga0501081_0460425
404 Ga0501035_0473351
405 Ga0501035_1566364
406 Ga0501045_0010712
407 nmdc:mga03683_493462_c1
408 nmdc:mga03n38_471495_c1
409 nmdc:mga00v17_195595_c1
410 nmdc:mga00v17_911307_c1
411 nmdc:mga0yw44_40435_c1
412 nmdc:mga0qj67_169906_c1
413 nmdc:mga08y16_1074624_c1
414 nmdc:mga08y16_574146_c1
415 Ga0495601_0568305
416 Ga0500635_0002035
417 Ga0495595_0003552
418 Ga0495619_0027713
419 Ga0495619_0118802
420 Ga0495619_0559209
421 Ga0500566_0001426
422 Ga0500568_0030323
423 Ga0500616_0000201
424 Ga0501084_0027559
425 Ga0501084_1353100
426 Ga0501082_0010396
427 Ga0501082_0998081
428 Ga0530510_0023114

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03449

GreA_GreB_N

Transcription elongation factor, N-terminal

32

102

0.97

PF01272

GreA_GreB

Transcription elongation factor, GreA/GreB, C-term

108

186

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
6rin-assembly1.cif.gz_F cryo-em structure of e. coli rna polymerase backtracked elongation complex bound to greb transcription factor 0.8361 6 139
4wqt-assembly3.cif.gz_Z thermus thermophilus rna polymerase complexed with an rna cleavage stimulating factor (a grea/gfh1 chimeric protein) 0.8185 3 138
3aoh-assembly2.cif.gz_Y rna polymerase-gfh1 complex (crystal type 1) 0.8141 6 138
6rin-assembly1.cif.gz_F cryo-em structure of e. coli rna polymerase backtracked elongation complex bound to greb transcription factor 0.8042 6 139
4wqt-assembly3.cif.gz_Z thermus thermophilus rna polymerase complexed with an rna cleavage stimulating factor (a grea/gfh1 chimeric protein) 0.7975 3 138
ID Description Score Start End Superfamily
af_P30128_1_76_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9124 3 61 1.10.287.180
af_P9WMT9_79_159_3.10.50.30 Alpha Beta;Roll;Chitinase A; domain 3;Transcription elongation factor, GreA/GreB, C-terminal domain 0.9067 66 136 3.10.50.30
af_P0A6W5_1_75_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.8846 3 60 1.10.287.180
2p4vB01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.8834 3 61 1.10.287.180
af_P9WMT9_4_78_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.8783 3 61 1.10.287.180
ID Description Score Start End GO Terms
AF-A0A6J6CV53-F1-model_v4 Transcription elongation factor GreA (Transcript cleavage factor GreA) 0.9315 4 139 GO:0003677
GO:0006354
GO:0032784
GO:0070063
AF-A0A5N6MFJ3-F1-model_v4 Transcription elongation factor GreA (Transcript cleavage factor GreA) 0.9273 1 139 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-A0A0G3UZP4-F1-model_v4 Transcription elongation factor GreA (Transcript cleavage factor GreA) 0.925 1 139 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-A0A0Q6Q1Z8-F1-model_v4 Transcription elongation factor GreA (Transcript cleavage factor GreA) 0.9241 2 139 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-A0A399JBE6-F1-model_v4 Transcription elongation factor GreA (Transcript cleavage factor GreA) 0.9223 3 139 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063

Map