F325127

General Info

Members Datasets Scaffolds Average Seq Length
214 122 214 273

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10021026|Ga0105240_100210266
Length 297
Sequence MMKNNVTSDAGRVTGNERLPEDFPPPAIRHPSRLGRYFSIYTALFKNSLAREMIFKGNFLLWIVVDSLWFVMQLCFISVLYLHTDGIGSWTKWQVVLLIGASNFIQQIFQAFFLINLTNLSELVRSGKLDFLLLLPVNTRFIISLRQVDLGGFFNATAAACVMAYAAHKLSLHPTLAQVAGFFALALCGVLIHYSLMLLLAAICFWTVKAQGIVMGYYNLFNIARMPDEAFKWGAFKAVFTFAIPMILVSNVPARVLTDKLGSPGPVVILLCMAGFCALLSEFGWRASLRRYTSASS

Samples

Sample ID Description Type Environment
1 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
58 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
59 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
60 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
61 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
62 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
63 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
73 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
74 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
75 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
76 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
77 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
78 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
79 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
80 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
81 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
92 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
93 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
94 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
95 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
96 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
97 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
98 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
104 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
105 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
106 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
107 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
121 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
122 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.6
Stem 0
Stem Tuber 0
Unclassified 1.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNXas_1002220 3300000545 Bacteria 1339
2 rootH2_10158335 3300003320 Bacteria 3819
3 rootH2_10301012 3300003320 Unclassified 1520
4 rootH1_10031500 3300003323 Bacteria 7857
5 Ga0070666_10016728 3300005335 Unclassified 4695
6 Ga0070714_100026565 3300005435 Bacteria 4786
7 Ga0070713_100345753 3300005436 Bacteria 1379
8 Ga0070711_100005625 3300005439 Bacteria 7504
9 Ga0070681_10024957 3300005458 Bacteria 6014
10 Ga0070707_100575897 3300005468 Unclassified 1088
11 Ga0070679_100088076 3300005530 Unclassified 3092
12 Ga0070679_100113143 3300005530 Unclassified 2700
13 Ga0070684_100285510 3300005535 Unclassified 1512
14 Ga0068853_100347821 3300005539 Bacteria 1378
15 Ga0070672_100332763 3300005543 Unclassified 1292
16 Ga0070704_100065185 3300005549 Unclassified 2621
17 Ga0068855_100040275 3300005563 Bacteria 5545
18 Ga0068855_100074727 3300005563 Bacteria 3935
19 Ga0068855_100156201 3300005563 Unclassified 2591
20 Ga0068855_100185120 3300005563 Bacteria 2352
21 Ga0068855_100374536 3300005563 Bacteria 1564
22 Ga0068857_100063087 3300005577 Bacteria 3294
23 Ga0068856_100002021 3300005614 Bacteria 21122
24 Ga0068864_100445474 3300005618 Unclassified 1238
25 Ga0068866_10266509 3300005718 Unclassified 1055
26 Ga0068863_100095938 3300005841 Unclassified 2815
27 Ga0068863_100223741 3300005841 Unclassified 1814
28 Ga0068858_100102392 3300005842 Unclassified 2671
29 Ga0068871_100067640 3300006358 Unclassified 2932
30 Ga0068871_100173838 3300006358 Unclassified 1848
31 Ga0075428_100002877 3300006844 Bacteria 18764
32 Ga0075428_100384751 3300006844 Bacteria 1504
33 Ga0075434_100197396 3300006871 Unclassified 2032
34 Ga0075436_100054473 3300006914 Bacteria 2761
35 Ga0097620_100005882 3300006931 Bacteria 12448
36 Ga0105240_10021026 3300009093 Bacteria 8685
37 Ga0105240_10047126 3300009093 Bacteria 5456
38 Ga0111539_10320151 3300009094 Bacteria 1805
39 Ga0105242_10073531 3300009176 Unclassified 2842
40 Ga0105238_10001107 3300009551 Bacteria 27230
41 Ga0105238_10025732 3300009551 Bacteria 6000
42 Ga0105238_10027253 3300009551 Bacteria 5822
43 Ga0105238_10089240 3300009551 Bacteria 3070
44 Ga0157370_10023781 3300013104 Bacteria 6078
45 Ga0157374_10153810 3300013296 Bacteria 2238
46 Ga0157374_10360199 3300013296 Unclassified 1446
47 Ga0157378_10335602 3300013297 Bacteria 1472
48 Ga0157372_10157345 3300013307 Bacteria 2625
49 Ga0157375_10000068 3300013308 Bacteria 110172
50 Ga0163163_10000138 3300014325 Bacteria 75256
51 Ga0163163_10299061 3300014325 Bacteria 1662
52 Ga0163163_10873545 3300014325 Bacteria 963
53 Ga0157377_10177697 3300014745 Unclassified 1336
54 Ga0157376_10063652 3300014969 Bacteria 3108
55 Ga0207680_10009928 3300025903 Bacteria 4742
56 Ga0207695_10035171 3300025913 Bacteria 5437
57 Ga0207695_10058813 3300025913 Bacteria 3989
58 Ga0207695_10136125 3300025913 Unclassified 2409
59 Ga0207663_10000881 3300025916 Bacteria 13659
60 Ga0207660_10465515 3300025917 Unclassified 1023
61 Ga0207652_10062509 3300025921 Unclassified 3218
62 Ga0207652_10064985 3300025921 Unclassified 3158
63 Ga0207646_10562633 3300025922 Unclassified 1025
64 Ga0207694_10002636 3300025924 Bacteria 14541
65 Ga0207694_10067517 3300025924 Bacteria 2791
66 Ga0207664_10031601 3300025929 Bacteria 4052
67 Ga0207686_10146809 3300025934 Unclassified 1637
68 Ga0207670_10021221 3300025936 Bacteria 4003
69 Ga0207661_10229722 3300025944 Unclassified 1643
70 Ga0207667_10012330 3300025949 Bacteria 9859
71 Ga0207667_10159476 3300025949 Bacteria 2321
72 Ga0207667_10204427 3300025949 Bacteria 2026
73 Ga0207667_10290739 3300025949 Bacteria 1670
74 Ga0207703_10109678 3300026035 Unclassified 2353
75 Ga0207639_10332095 3300026041 Bacteria 1353
76 Ga0207702_10001962 3300026078 Bacteria 20027
77 Ga0207702_10016135 3300026078 Bacteria 6183
78 Ga0207702_10172982 3300026078 Bacteria 1982
79 Ga0207641_10248246 3300026088 Viruses 1661
80 Ga0207676_10342409 3300026095 Unclassified 1380
81 Ga0207674_10079009 3300026116 Bacteria 3295
82 Ga0265337_1000195 3300028556 Bacteria 32084
83 Ga0265337_1000263 3300028556 Bacteria 28495
84 Ga0265337_1011157 3300028556 Bacteria 3109
85 Ga0265337_1014622 3300028556 Bacteria 2598
86 Ga0265326_10002018 3300028558 Bacteria 6943
87 Ga0265326_10046528 3300028558 Bacteria 1230
88 Ga0265319_1000016 3300028563 Bacteria 176245
89 Ga0265319_1070582 3300028563 Unclassified 1120
90 Ga0265334_10025454 3300028573 Bacteria 2394
91 Ga0265318_10029353 3300028577 Bacteria 2145
92 Ga0265323_10000548 3300028653 Bacteria 20817
93 Ga0265323_10055080 3300028653 Bacteria 1399
94 Ga0265336_10001295 3300028666 Bacteria 11732
95 Ga0265336_10029249 3300028666 Unclassified 1720
96 Ga0265338_10000008 3300028800 Bacteria 481542
97 Ga0265338_10000067 3300028800 Bacteria 186731
98 Ga0265338_10000650 3300028800 Bacteria 59992
99 Ga0265338_10000946 3300028800 Bacteria 48852
100 Ga0265338_10001570 3300028800 Bacteria 36849
101 Ga0265338_10001975 3300028800 Bacteria 31933
102 Ga0265338_10003736 3300028800 Bacteria 21165
103 Ga0265338_10006284 3300028800 Bacteria 15186
104 Ga0265338_10006868 3300028800 Bacteria 14329
105 Ga0265338_10009849 3300028800 Bacteria 11320
106 Ga0265338_10013543 3300028800 Bacteria 9194
107 Ga0265338_10014034 3300028800 Bacteria 8970
108 Ga0265338_10025353 3300028800 Bacteria 6021
109 Ga0265338_10083984 3300028800 Bacteria 2661
110 Ga0265338_10085011 3300028800 Unclassified 2639
111 Ga0265338_10109904 3300028800 Unclassified 2223
112 Ga0265338_10112049 3300028800 Unclassified 2195
113 Ga0265338_10116245 3300028800 Bacteria 2143
114 Ga0265338_10118172 3300028800 Bacteria 2119
115 Ga0265338_10133943 3300028800 Bacteria 1952
116 Ga0265338_10162835 3300028800 Bacteria 1721
117 Ga0265324_10000698 3300029957 Bacteria 22412
118 Ga0265324_10000790 3300029957 Bacteria 20763
119 Ga0265324_10002897 3300029957 Bacteria 8429
120 Ga0265324_10006812 3300029957 Bacteria 4714
121 Ga0265324_10009454 3300029957 Bacteria 3804
122 Ga0265324_10031174 3300029957 Bacteria 1868
123 Ga0265320_10000472 3300031240 Bacteria 31431
124 Ga0265320_10001022 3300031240 Bacteria 20851
125 Ga0265320_10006121 3300031240 Bacteria 7622
126 Ga0265320_10016826 3300031240 Bacteria 4081
127 Ga0265320_10164347 3300031240 Bacteria 999
128 Ga0265325_10097152 3300031241 Bacteria 1446
129 Ga0265340_10000574 3300031247 Bacteria 20423
130 Ga0265340_10054022 3300031247 Unclassified 1938
131 Ga0265339_10012036 3300031249 Bacteria 5302
132 Ga0265339_10112854 3300031249 Bacteria 1404
133 Ga0265327_10000705 3300031251 Bacteria 52883
134 Ga0265316_10004558 3300031344 Bacteria 13762
135 Ga0265316_10042786 3300031344 Bacteria 3617
136 Ga0265316_10060433 3300031344 Bacteria 2945
137 Ga0265316_10159834 3300031344 Unclassified 1685
138 Ga0265313_10005173 3300031595 Bacteria 9686
139 Ga0265314_10079767 3300031711 Unclassified 2163
140 Ga0373929_0008830 3300035085 Unclassified 1862
141 Ga0373944_0001452 3300035089 Bacteria 5984
142 Ga0373949_0008108 3300035090 Bacteria 2302
143 Ga0373932_0000005 3300035112 Bacteria 259528
144 Ga0373956_0004042 3300035119 Bacteria 5889
145 Ga0373942_0036798 3300035207 Bacteria 1320
146 Ga0373962_0000238 3300035242 Bacteria 11645
147 Ga0373931_0000016 3300035691 Bacteria 217932
148 Ga0373927_0004978 3300035695 Bacteria 9208
149 Ga0373927_0008659 3300035695 Bacteria 6837
150 Ga0373947_0084156 3300035725 Bacteria 1974
151 Ga0373937_0002215 3300036401 Bacteria 16242
152 Ga0316584_0287191 3300036712 Unclassified 1194
153 Ga0373925_0000485 3300037068 Bacteria 39875
154 Ga0373925_0033276 3300037068 Bacteria 3799
155 Ga0451577_0008547 3300042876 Bacteria 9958
156 Ga0451577_0011676 3300042876 Bacteria 8293
157 Ga0451577_0020635 3300042876 Bacteria 6043
158 Ga0453683_0140325 3300044673 Bacteria 1525
159 Ga0453684_0000532 3300044712 Bacteria 145255
160 Ga0453684_0410773 3300044712 Bacteria 1514
161 Ga0453684_0551025 3300044712 Unclassified 1270
162 Ga0453684_0616911 3300044712 Unclassified 1187
163 Ga0451576_0175790 3300045051 Bacteria 2235
164 Ga0451576_0659947 3300045051 Bacteria 1099
165 Ga0495592_0000035 3300046454 Bacteria 125802
166 Ga0495629_0114322 3300046459 Bacteria 1881
167 Ga0495629_0244553 3300046459 Bacteria 1235
168 Ga0495639_0022737 3300046475 Bacteria 2752
169 Ga0495662_0017940 3300046476 Bacteria 3425
170 Ga0495662_0043003 3300046476 Unclassified 2181
171 Ga0495618_0001837 3300046514 Bacteria 13992
172 Ga0495618_0013627 3300046514 Unclassified 4947
173 Ga0495628_0005849 3300046516 Bacteria 10775
174 Ga0495628_0400168 3300046516 Bacteria 1003
175 Ga0495630_0000136 3300046517 Bacteria 57957
176 Ga0495630_0001827 3300046517 Bacteria 14852
177 Ga0495630_0073963 3300046517 Bacteria 2566
178 Ga0495630_0198699 3300046517 Bacteria 1530
179 Ga0495630_0213252 3300046517 Unclassified 1474
180 Ga0495666_0008745 3300046526 Bacteria 5073
181 Ga0495666_0026112 3300046526 Bacteria 2882
182 Ga0495652_0045499 3300046529 Unclassified 3772
183 Ga0495586_0000018 3300046535 Bacteria 112658
184 Ga0495586_0000615 3300046535 Bacteria 20579
185 Ga0495586_0004661 3300046535 Bacteria 7331
186 Ga0495645_0018533 3300046543 Bacteria 5001
187 Ga0495667_0265538 3300046559 Unclassified 1091
188 Ga0495634_0005861 3300046642 Bacteria 9385
189 Ga0495635_0033950 3300046663 Bacteria 3539
190 Ga0495657_0037319 3300046675 Bacteria 3350
191 Ga0495599_0021510 3300046678 Unclassified 4025
192 Ga0495647_0036770 3300046681 Bacteria 1844
193 Ga0495658_0008177 3300046683 Bacteria 5183
194 Ga0495658_0059259 3300046683 Bacteria 2192
195 Ga0495613_0000662 3300046689 Bacteria 27289
196 Ga0495613_0016149 3300046689 Bacteria 5560
197 Ga0495613_0089238 3300046689 Bacteria 2233
198 Ga0495674_0001179 3300047319 Bacteria 25244
199 Ga0495680_0015570 3300047322 Bacteria 6559
200 Ga0501031_0000039 3300049568 Bacteria 72794
201 Ga0501032_0004230 3300049569 Bacteria 10855
202 Ga0501033_0001393 3300049570 Bacteria 21488
203 Ga0501033_0118025 3300049570 Bacteria 1927
204 Ga0501036_0275952 3300049572 Bacteria 1407
205 Ga0501047_0580561 3300049581 Unclassified 944
206 Ga0501080_0103378 3300049742 Bacteria 2642
207 Ga0501035_0075376 3300049822 Bacteria 2984
208 Ga0501035_0129650 3300049822 Bacteria 2199
209 Ga0501044_0000133 3300049823 Bacteria 91116
210 Ga0501044_0050959 3300049823 Bacteria 4270
211 nmdc:mga06r32_243844_c1 3300050510 Bacteria 1784
212 nmdc:mga0n895_199549_c1 3300050512 Unclassified 2032
213 nmdc:mga0n895_308665_c1 3300050512 Bacteria 1603
214 nmdc:mga0rr50_474659_c1 3300050513 Unclassified 1062

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046516 Ga0495628_0400168 Ga0495628_0400168_22_630 202
2 3300035725 Ga0373947_0084156 Ga0373947_0084156_12_746 232
3 3300042876 Ga0451577_0020635 Ga0451577_0020635_23_757 232
4 3300049581 Ga0501047_0580561 Ga0501047_0580561_176_910 232
5 3300014325 Ga0163163_10873545 Ga0163163_108735451 252
6 3300003320 rootH2_10158335 rootH2_101583353 253
7 3300003320 rootH2_10301012 rootH2_103010122 253
8 3300003323 rootH1_10031500 rootH1_1003150010 253
9 3300005435 Ga0070714_100026565 Ga0070714_1000265656 253
10 3300005439 Ga0070711_100005625 Ga0070711_1000056254 253
11 3300005458 Ga0070681_10024957 Ga0070681_100249573 253
12 3300005530 Ga0070679_100088076 Ga0070679_1000880761 253
13 3300005530 Ga0070679_100113143 Ga0070679_1001131431 253
14 3300005535 Ga0070684_100285510 Ga0070684_1002855102 253
15 3300005539 Ga0068853_100347821 Ga0068853_1003478212 253
16 3300005549 Ga0070704_100065185 Ga0070704_1000651853 253
17 3300005563 Ga0068855_100040275 Ga0068855_1000402752 253
18 3300005563 Ga0068855_100074727 Ga0068855_1000747274 253
19 3300005563 Ga0068855_100156201 Ga0068855_1001562013 253
20 3300005563 Ga0068855_100185120 Ga0068855_1001851203 253
21 3300005614 Ga0068856_100002021 Ga0068856_10000202117 253
22 3300009093 Ga0105240_10047126 Ga0105240_100471266 253
23 3300009551 Ga0105238_10001107 Ga0105238_1000110713 253
24 3300009551 Ga0105238_10025732 Ga0105238_100257326 253
25 3300009551 Ga0105238_10089240 Ga0105238_100892403 253
26 3300013104 Ga0157370_10023781 Ga0157370_100237814 253
27 3300013307 Ga0157372_10157345 Ga0157372_101573452 253
28 3300014969 Ga0157376_10063652 Ga0157376_100636522 253
29 3300025913 Ga0207695_10136125 Ga0207695_101361254 253
30 3300025916 Ga0207663_10000881 Ga0207663_100008817 253
31 3300025917 Ga0207660_10465515 Ga0207660_104655151 253
32 3300025921 Ga0207652_10062509 Ga0207652_100625093 253
33 3300025921 Ga0207652_10064985 Ga0207652_100649851 253
34 3300025924 Ga0207694_10002636 Ga0207694_100026368 253
35 3300025924 Ga0207694_10067517 Ga0207694_100675172 253
36 3300025929 Ga0207664_10031601 Ga0207664_100316015 253
37 3300025949 Ga0207667_10012330 Ga0207667_100123306 253
38 3300025949 Ga0207667_10159476 Ga0207667_101594764 253
39 3300025949 Ga0207667_10204427 Ga0207667_102044272 253
40 3300025949 Ga0207667_10290739 Ga0207667_102907392 253
41 3300026041 Ga0207639_10332095 Ga0207639_103320951 253
42 3300026078 Ga0207702_10001962 Ga0207702_1000196217 253
43 3300026078 Ga0207702_10016135 Ga0207702_100161356 253
44 3300026088 Ga0207641_10248246 Ga0207641_102482462 253
45 3300028556 Ga0265337_1000195 Ga0265337_10001953 253
46 3300028556 Ga0265337_1000263 Ga0265337_100026323 253
47 3300028556 Ga0265337_1011157 Ga0265337_10111572 253
48 3300028556 Ga0265337_1014622 Ga0265337_10146222 253
49 3300028563 Ga0265319_1000016 Ga0265319_1000016111 253
50 3300028563 Ga0265319_1070582 Ga0265319_10705821 253
51 3300028573 Ga0265334_10025454 Ga0265334_100254541 253
52 3300028577 Ga0265318_10029353 Ga0265318_100293532 253
53 3300028653 Ga0265323_10000548 Ga0265323_100005483 253
54 3300028653 Ga0265323_10055080 Ga0265323_100550802 253
55 3300028666 Ga0265336_10001295 Ga0265336_100012953 253
56 3300028666 Ga0265336_10029249 Ga0265336_100292491 253
57 3300028800 Ga0265338_10000650 Ga0265338_1000065013 253
58 3300028800 Ga0265338_10001975 Ga0265338_1000197524 253
59 3300028800 Ga0265338_10003736 Ga0265338_100037362 253
60 3300028800 Ga0265338_10006284 Ga0265338_1000628411 253
61 3300028800 Ga0265338_10025353 Ga0265338_100253533 253
62 3300028800 Ga0265338_10109904 Ga0265338_101099042 253
63 3300028800 Ga0265338_10112049 Ga0265338_101120492 253
64 3300028800 Ga0265338_10116245 Ga0265338_101162453 253
65 3300028800 Ga0265338_10133943 Ga0265338_101339431 253
66 3300029957 Ga0265324_10000698 Ga0265324_100006983 253
67 3300029957 Ga0265324_10009454 Ga0265324_100094542 253
68 3300029957 Ga0265324_10031174 Ga0265324_100311742 253
69 3300031240 Ga0265320_10000472 Ga0265320_1000047220 253
70 3300031240 Ga0265320_10006121 Ga0265320_100061213 253
71 3300031240 Ga0265320_10164347 Ga0265320_101643472 253
72 3300031247 Ga0265340_10000574 Ga0265340_1000057416 253
73 3300031247 Ga0265340_10054022 Ga0265340_100540221 253
74 3300031251 Ga0265327_10000705 Ga0265327_100007055 253
75 3300031344 Ga0265316_10042786 Ga0265316_100427862 253
76 3300031344 Ga0265316_10159834 Ga0265316_101598342 253
77 3300031711 Ga0265314_10079767 Ga0265314_100797672 253
78 3300035085 Ga0373929_0008830 Ga0373929_0008830_164_961 253
79 3300035089 Ga0373944_0001452 Ga0373944_0001452_3118_3915 253
80 3300035090 Ga0373949_0008108 Ga0373949_0008108_1257_2054 253
81 3300035112 Ga0373932_0000005 Ga0373932_0000005_253960_254757 253
82 3300035207 Ga0373942_0036798 Ga0373942_0036798_195_992 253
83 3300035242 Ga0373962_0000238 Ga0373962_0000238_6077_6874 253
84 3300035691 Ga0373931_0000016 Ga0373931_0000016_4772_5569 253
85 3300035695 Ga0373927_0008659 Ga0373927_0008659_2942_3739 253
86 3300037068 Ga0373925_0000485 Ga0373925_0000485_4656_5453 253
87 3300044712 Ga0453684_0000532 Ga0453684_0000532_128015_128812 253
88 3300049568 Ga0501031_0000039 Ga0501031_0000039_49621_50418 253
89 3300049569 Ga0501032_0004230 Ga0501032_0004230_2536_3333 253
90 3300049570 Ga0501033_0001393 Ga0501033_0001393_13387_14184 253
91 3300049570 Ga0501033_0118025 Ga0501033_0118025_709_1509 253
92 3300049572 Ga0501036_0275952 Ga0501036_0275952_59_859 253
93 3300049742 Ga0501080_0103378 Ga0501080_0103378_1146_1943 253
94 3300049822 Ga0501035_0075376 Ga0501035_0075376_1496_2293 253
95 3300049822 Ga0501035_0129650 Ga0501035_0129650_569_1369 253
96 3300049823 Ga0501044_0000133 Ga0501044_0000133_30101_30898 253
97 3300049823 Ga0501044_0050959 Ga0501044_0050959_1222_2022 253
98 3300026078 Ga0207702_10172982 Ga0207702_101729822 254
99 3300028558 Ga0265326_10002018 Ga0265326_100020182 254
100 3300028800 Ga0265338_10000008 Ga0265338_10000008188 254
101 3300028800 Ga0265338_10000067 Ga0265338_1000006790 254
102 3300028800 Ga0265338_10083984 Ga0265338_100839843 254
103 3300029957 Ga0265324_10000790 Ga0265324_100007903 254
104 3300029957 Ga0265324_10002897 Ga0265324_100028974 254
105 3300044673 Ga0453683_0140325 Ga0453683_0140325_220_1020 254
106 3300044712 Ga0453684_0616911 Ga0453684_0616911_287_1087 254
107 3300046535 Ga0495586_0000615 Ga0495586_0000615_12970_13845 254
108 3300009551 Ga0105238_10027253 Ga0105238_100272536 255
109 3300031240 Ga0265320_10016826 Ga0265320_100168264 255
110 3300035119 Ga0373956_0004042 Ga0373956_0004042_4966_5841 255
111 3300036401 Ga0373937_0002215 Ga0373937_0002215_15130_16005 255
112 3300046459 Ga0495629_0114322 Ga0495629_0114322_290_1165 255
113 3300046514 Ga0495618_0001837 Ga0495618_0001837_2881_3756 255
114 3300046517 Ga0495630_0198699 Ga0495630_0198699_515_1390 255
115 3300046559 Ga0495667_0265538 Ga0495667_0265538_49_924 255
116 3300046642 Ga0495634_0005861 Ga0495634_0005861_7283_8158 255
117 3300046663 Ga0495635_0033950 Ga0495635_0033950_430_1305 255
118 3300046689 Ga0495613_0000662 Ga0495613_0000662_22095_22970 255
119 3300047322 Ga0495680_0015570 Ga0495680_0015570_4879_5754 255
120 3300013308 Ga0157375_10000068 Ga0157375_1000006825 256
121 3300028800 Ga0265338_10013543 Ga0265338_100135435 256
122 3300031249 Ga0265339_10012036 Ga0265339_100120365 256
123 3300005335 Ga0070666_10016728 Ga0070666_100167281 257
124 3300006914 Ga0075436_100054473 Ga0075436_1000544732 257
125 3300025903 Ga0207680_10009928 Ga0207680_100099284 257
126 3300006844 Ga0075428_100002877 Ga0075428_10000287719 258
127 3300028800 Ga0265338_10006868 Ga0265338_100068685 258
128 3300050510 nmdc:mga06r32_243844_c1 nmdc:mga06r32_243844_c1_194_1006 258
129 3300005543 Ga0070672_100332763 Ga0070672_1003327632 259
130 3300046475 Ga0495639_0022737 Ga0495639_0022737_1043_1858 259
131 3300046476 Ga0495662_0017940 Ga0495662_0017940_2373_3188 259
132 3300046535 Ga0495586_0004661 Ga0495586_0004661_3900_4715 259
133 3300046681 Ga0495647_0036770 Ga0495647_0036770_722_1537 259
134 3300046683 Ga0495658_0008177 Ga0495658_0008177_3881_4696 259
135 3300046689 Ga0495613_0016149 Ga0495613_0016149_2883_3698 259
136 3300006844 Ga0075428_100384751 Ga0075428_1003847512 260
137 3300006871 Ga0075434_100197396 Ga0075434_1001973963 260
138 3300013296 Ga0157374_10360199 Ga0157374_103601992 260
139 3300045051 Ga0451576_0175790 Ga0451576_0175790_1017_1856 260
140 3300050512 nmdc:mga0n895_199549_c1 nmdc:mga0n895_199549_c1_891_1730 260
141 3300013296 Ga0157374_10153810 Ga0157374_101538103 261
142 3300025944 Ga0207661_10229722 Ga0207661_102297222 261
143 3300028558 Ga0265326_10046528 Ga0265326_100465282 261
144 3300028800 Ga0265338_10009849 Ga0265338_100098497 261
145 3300028800 Ga0265338_10118172 Ga0265338_101181722 261
146 3300029957 Ga0265324_10006812 Ga0265324_100068123 261
147 3300031241 Ga0265325_10097152 Ga0265325_100971522 261
148 3300031249 Ga0265339_10112854 Ga0265339_101128542 261
149 3300031344 Ga0265316_10060433 Ga0265316_100604332 261
150 3300031595 Ga0265313_10005173 Ga0265313_100051735 261
151 3300035695 Ga0373927_0004978 Ga0373927_0004978_7015_7866 261
152 3300037068 Ga0373925_0033276 Ga0373925_0033276_527_1378 261
153 3300042876 Ga0451577_0008547 Ga0451577_0008547_7386_8213 261
154 3300046517 Ga0495630_0001827 Ga0495630_0001827_11337_12188 261
155 3300046526 Ga0495666_0026112 Ga0495666_0026112_781_1632 261
156 3300046675 Ga0495657_0037319 Ga0495657_0037319_1532_2368 261
157 3300005436 Ga0070713_100345753 Ga0070713_1003457532 262
158 3300005842 Ga0068858_100102392 Ga0068858_1001023923 262
159 3300006358 Ga0068871_100067640 Ga0068871_1000676402 262
160 3300009094 Ga0111539_10320151 Ga0111539_103201511 262
161 3300014325 Ga0163163_10000138 Ga0163163_1000013850 262
162 3300025936 Ga0207670_10021221 Ga0207670_100212213 262
163 3300026035 Ga0207703_10109678 Ga0207703_101096781 262
164 3300044712 Ga0453684_0551025 Ga0453684_0551025_20_853 262
165 3300046454 Ga0495592_0000035 Ga0495592_0000035_707_1549 262
166 3300046514 Ga0495618_0013627 Ga0495618_0013627_1311_2153 262
167 3300046516 Ga0495628_0005849 Ga0495628_0005849_5684_6526 262
168 3300046517 Ga0495630_0073963 Ga0495630_0073963_71_913 262
169 3300046529 Ga0495652_0045499 Ga0495652_0045499_2468_3310 262
170 3300046543 Ga0495645_0018533 Ga0495645_0018533_18_860 262
171 3300046678 Ga0495599_0021510 Ga0495599_0021510_1198_2040 262
172 3300050513 nmdc:mga0rr50_474659_c1 nmdc:mga0rr50_474659_c1_38_910 262
173 3300005468 Ga0070707_100575897 Ga0070707_1005758971 263
174 3300005563 Ga0068855_100374536 Ga0068855_1003745362 263
175 3300005577 Ga0068857_100063087 Ga0068857_1000630873 263
176 3300005618 Ga0068864_100445474 Ga0068864_1004454742 263
177 3300005718 Ga0068866_10266509 Ga0068866_102665092 263
178 3300005841 Ga0068863_100223741 Ga0068863_1002237412 263
179 3300006358 Ga0068871_100173838 Ga0068871_1001738382 263
180 3300006931 Ga0097620_100005882 Ga0097620_1000058829 263
181 3300009176 Ga0105242_10073531 Ga0105242_100735313 263
182 3300014325 Ga0163163_10299061 Ga0163163_102990612 263
183 3300014745 Ga0157377_10177697 Ga0157377_101776972 263
184 3300025922 Ga0207646_10562633 Ga0207646_105626331 263
185 3300025934 Ga0207686_10146809 Ga0207686_101468092 263
186 3300026095 Ga0207676_10342409 Ga0207676_103424091 263
187 3300026116 Ga0207674_10079009 Ga0207674_100790093 263
188 3300028800 Ga0265338_10000946 Ga0265338_1000094637 263
189 3300028800 Ga0265338_10001570 Ga0265338_1000157019 263
190 3300028800 Ga0265338_10014034 Ga0265338_100140348 263
191 3300028800 Ga0265338_10085011 Ga0265338_100850112 263
192 3300028800 Ga0265338_10162835 Ga0265338_101628352 263
193 3300031240 Ga0265320_10001022 Ga0265320_1000102214 263
194 3300031344 Ga0265316_10004558 Ga0265316_1000455813 263
195 3300036712 Ga0316584_0287191 Ga0316584_0287191_237_1127 263
196 3300042876 Ga0451577_0011676 Ga0451577_0011676_1533_2369 263
197 3300045051 Ga0451576_0659947 Ga0451576_0659947_199_1071 263
198 3300050512 nmdc:mga0n895_308665_c1 nmdc:mga0n895_308665_c1_505_1401 263
199 3300000545 CNXas_1002220 CNXas_10022202 264
200 3300005841 Ga0068863_100095938 Ga0068863_1000959382 264
201 3300009093 Ga0105240_10021026 Ga0105240_100210266 264
202 3300013297 Ga0157378_10335602 Ga0157378_103356022 264
203 3300025913 Ga0207695_10035171 Ga0207695_100351714 264
204 3300025913 Ga0207695_10058813 Ga0207695_100588133 264
205 3300044712 Ga0453684_0410773 Ga0453684_0410773_278_1123 264
206 3300046459 Ga0495629_0244553 Ga0495629_0244553_111_965 264
207 3300046476 Ga0495662_0043003 Ga0495662_0043003_404_1258 264
208 3300046517 Ga0495630_0000136 Ga0495630_0000136_22570_23424 264
209 3300046517 Ga0495630_0213252 Ga0495630_0213252_598_1452 264
210 3300046526 Ga0495666_0008745 Ga0495666_0008745_938_1792 264
211 3300046535 Ga0495586_0000018 Ga0495586_0000018_77209_78063 264
212 3300046683 Ga0495658_0059259 Ga0495658_0059259_324_1178 264
213 3300046689 Ga0495613_0089238 Ga0495613_0089238_209_1063 264
214 3300047319 Ga0495674_0001179 Ga0495674_0001179_14005_14859 264

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06182

ABC2_membrane_6

ABC-2 family transporter protein

67

296

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jbh-assembly1.cif.gz_D cryo-em structure and transport mechanism of a wall teichoic acid abc transporter 0.6358 28 254
8dku-assembly1.cif.gz_B cryoem structure of the a. aeolicus wzmwzt transporter bound to the native o antigen 0.628 18 257
8dku-assembly1.cif.gz_B cryoem structure of the a. aeolicus wzmwzt transporter bound to the native o antigen 0.5965 18 257
6oih-assembly1.cif.gz_D crystal structure of o-antigen polysaccharide abc-transporter 0.5873 18 259
6oih-assembly1.cif.gz_D crystal structure of o-antigen polysaccharide abc-transporter 0.5766 18 259
ID Description Score Start End Superfamily
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5334 60 251 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5209 65 251 3.40.1710.10
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5053 60 250 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.4215 60 251 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.4023 65 251 3.40.1710.10
ID Description Score Start End GO Terms
AF-A0A2V6LXK8-F1-model_v4 ABC transporter permease 0.9583 49 264 GO:0016020
AF-A0A419T526-F1-model_v4 ABC transporter permease 0.949 73 264 GO:0016020
AF-A0A7W0S4S8-F1-model_v4 ABC-2 family transporter protein 0.9479 63 264 GO:0016020
AF-A0A2V6LXK8-F1-model_v4 ABC transporter permease 0.9455 49 264 GO:0016020
AF-A0A846NWE6-F1-model_v4 deleted 0.9396 40 264

Feature Viewer

pLDDT pTM Quality
75.37 0.73 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map