F324322

General Info

Members Datasets Scaffolds Average Seq Length
213 132 426 357

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0003807|Ga0451577_0003807_7473_8702
Length 409
Sequence MRASSGACSMVRTPARLPRSQSVNDNTQGDIMSAVIESNVRNATRDSISDDGSQVRTGAVSVESMKKATTETLLTPRFYTTDYAALDKLDVSPVRAEWDAMMAEYEGDNNHDHFQRDAAFEVELKEQFSRISPELRKEFMDFLVSSVTSEFSGCVLYNEIKKNVSNPDIKALMGMMARDESRHAGFINASLKDLGMGVDLGSLKRVKKYTYFKPKYIYYATYLSEKIGYARYITIYRTLEKYPERRFHPIFRWFERWCNDEFRHGESFALLMRAHPHLLEGGNKLWIRFFLLAVYATMYVRDHTRPYMHQAFGIDTTQYDFEVFRITSEISKQVFPLTLDTDHPAFRRGLDQLCKISAKVDAAKAQGGVLSLIKRGVYAAQGAAVFARLYLLPVKANALPAQIRVAPVW

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
10 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
11 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
12 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
16 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
17 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
27 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
28 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
29 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
30 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
31 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
32 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
46 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
47 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
48 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
49 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
54 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
55 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
56 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
57 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
58 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
59 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
60 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
61 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
62 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
63 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
65 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
69 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
70 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
71 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
72 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
73 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
74 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
75 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
78 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
79 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
80 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
81 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
82 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
83 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
84 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
85 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
86 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
87 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
88 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
89 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
90 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
91 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
92 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
93 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
98 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
99 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
100 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
101 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
102 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
103 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
104 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
105 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
106 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
107 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
108 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
109 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
110 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
111 2643221585 Pelomonas sp. Root662 Isolate Unclassified
112 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
113 2643221656 Pelomonas sp. Root405 Isolate Unclassified
114 2643221660 Methylibium sp. Root1272 Isolate Unclassified
115 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
116 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
117 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
118 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
119 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
120 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
121 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
122 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
123 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
124 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
125 2902330777 Methylobacterium sp. 2A Isolate Unclassified
126 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
127 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
128 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
129 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
130 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
131 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
132 641522639 Methylobacterium sp. 4-46 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.92
Metatranscriptomes 2.82
Isolates 11.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.74
Nodule 1.41
Rhizoplane 1.88
Rhizosphere 70.42
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0003807 3300042876 Bacteria 16426
2 Ga0065165_1000694 3300005262 Bacteria 48071
3 Ga0065165_1024859 3300005262 Bacteria 2003
4 Ga0070658_10017278 3300005327 Bacteria 5773
5 Ga0070658_10337482 3300005327 Bacteria 1289
6 Ga0070668_100018274 3300005347 Bacteria 5261
7 Ga0070671_100193767 3300005355 Bacteria 1723
8 Ga0070673_100026943 3300005364 Bacteria 4254
9 Ga0070672_100101941 3300005543 Bacteria 2329
10 Ga0070665_100003595 3300005548 Bacteria 16416
11 Ga0070665_100012151 3300005548 Bacteria 8682
12 Ga0070665_100153363 3300005548 Bacteria 2306
13 Ga0070665_100401573 3300005548 Bacteria 1378
14 Ga0068859_100122714 3300005617 Bacteria 2665
15 Ga0068864_100401765 3300005618 Bacteria 1302
16 Ga0068861_100081194 3300005719 Bacteria 2538
17 Ga0068862_100102828 3300005844 Bacteria 2501
18 Ga0081540_1001444 3300005983 Bacteria 20535
19 Ga0081540_1031043 3300005983 Bacteria 2947
20 Ga0075365_10028296 3300006038 Bacteria 3574
21 Ga0075365_10054691 3300006038 Bacteria 2648
22 Ga0075363_100114228 3300006048 Bacteria 1503
23 Ga0075367_10080087 3300006178 Bacteria 1975
24 Ga0097621_100086020 3300006237 Bacteria 2623
25 Ga0068871_100225205 3300006358 Bacteria 1626
26 Ga0097620_100122718 3300006931 Bacteria 2665
27 Ga0105240_10126521 3300009093 Bacteria 3070
28 Ga0105243_10337608 3300009148 Bacteria 1379
29 Ga0105248_10148122 3300009177 Bacteria 2648
30 Ga0105238_10096073 3300009551 Bacteria 2950
31 Ga0105249_10056177 3300009553 Bacteria 3604
32 Ga0163163_10046267 3300014325 Bacteria 4274
33 Ga0163163_10090654 3300014325 Bacteria 3070
34 Ga0157380_10350489 3300014326 Bacteria 1381
35 Ga0213875_10001417 3300021388 Bacteria 15584
36 Ga0213871_10015565 3300021441 Bacteria 1821
37 Ga0209758_1000557 3300025297 Bacteria 58827
38 Ga0209758_1016600 3300025297 Bacteria 3729
39 Ga0209256_1027550 3300025299 Bacteria 1618
40 Ga0207426_1000328 3300025302 Bacteria 90659
41 Ga0207426_1012558 3300025302 Bacteria 3175
42 Ga0207705_10012940 3300025909 Bacteria 6021
43 Ga0207695_10045728 3300025913 Bacteria 4645
44 Ga0207712_10070673 3300025961 Bacteria 2508
45 Ga0207668_10087441 3300025972 Bacteria 2279
46 Ga0207639_10331786 3300026041 Bacteria 1354
47 Ga0207678_10074619 3300026067 Bacteria 2906
48 Ga0207702_10276171 3300026078 Bacteria 1586
49 Ga0207675_100143051 3300026118 Bacteria 2273
50 Ga0209968_1003506 3300027526 Bacteria 2351
51 Ga0209966_1000013 3300027695 Bacteria 83121
52 Ga0268266_10000539 3300028379 Bacteria 52742
53 Ga0268266_10036071 3300028379 Bacteria 4207
54 Ga0268265_10099900 3300028380 Bacteria 2340
55 Ga0268264_10044860 3300028381 Bacteria 3669
56 Ga0265332_10001180 3300031238 Bacteria 15121
57 Ga0265328_10000102 3300031239 Bacteria 41869
58 Ga0265328_10011873 3300031239 Bacteria 3474
59 Ga0265325_10000622 3300031241 Bacteria 25870
60 Ga0265340_10026579 3300031247 Bacteria 2924
61 Ga0265339_10021365 3300031249 Bacteria 3767
62 Ga0265331_10001308 3300031250 Bacteria 18466
63 Ga0265331_10012113 3300031250 Bacteria 4688
64 Ga0265327_10000613 3300031251 Bacteria 58852
65 Ga0265327_10009227 3300031251 Bacteria 7156
66 Ga0265316_10010270 3300031344 Bacteria 8542
67 Ga0265316_10020016 3300031344 Bacteria 5708
68 Ga0265316_10288620 3300031344 Bacteria 1197
69 Ga0265313_10001758 3300031595 Bacteria 19875
70 Ga0316575_10001186 3300031665 Bacteria 8215
71 Ga0316575_10001332 3300031665 Bacteria 7901
72 Ga0316575_10035304 3300031665 Bacteria 1965
73 Ga0316579_10000138 3300031691 Bacteria 20267
74 Ga0316579_10019310 3300031691 Bacteria 3011
75 Ga0316579_10040075 3300031691 Bacteria 2171
76 Ga0265342_10000087 3300031712 Bacteria 100045
77 Ga0265342_10017852 3300031712 Bacteria 4606
78 Ga0316576_10000319 3300031727 Bacteria 21388
79 Ga0316576_10000993 3300031727 Bacteria 14601
80 Ga0316576_10001976 3300031727 Bacteria 11457
81 Ga0316576_10009755 3300031727 Bacteria 6214
82 Ga0316576_10012203 3300031727 Bacteria 5668
83 Ga0316576_10025065 3300031727 Bacteria 4171
84 Ga0316576_10028674 3300031727 Bacteria 3926
85 Ga0316576_10037040 3300031727 Bacteria 3489
86 Ga0316576_10068909 3300031727 Bacteria 2608
87 Ga0316576_10138549 3300031727 Bacteria 1831
88 Ga0316576_10245992 3300031727 Bacteria 1343
89 Ga0316578_10000010 3300031728 Bacteria 44911
90 Ga0316578_10003725 3300031728 Bacteria 7044
91 Ga0316578_10008801 3300031728 Bacteria 5158
92 Ga0316578_10032942 3300031728 Bacteria 2964
93 Ga0316578_10063180 3300031728 Bacteria 2184
94 Ga0316578_10070939 3300031728 Bacteria 2063
95 Ga0316578_10096161 3300031728 Bacteria 1773
96 Ga0316578_10149002 3300031728 Bacteria 1409
97 Ga0316577_10000056 3300031733 Bacteria 26584
98 Ga0316577_10000984 3300031733 Bacteria 12723
99 Ga0316577_10133778 3300031733 Bacteria 1395
100 Ga0316583_10004787 3300032133 Bacteria 4834
101 Ga0316585_10000797 3300032137 Bacteria 7944
102 Ga0316585_10000814 3300032137 Bacteria 7883
103 Ga0316585_10001557 3300032137 Bacteria 6082
104 Ga0316580_10000236 3300032139 Bacteria 11607
105 Ga0316580_10010895 3300032139 Bacteria 2754
106 Ga0316593_10004335 3300032168 Bacteria 3633
107 Ga0307510_10006920 3300033180 Bacteria 13521
108 Ga0307510_10183887 3300033180 Bacteria 1648
109 Ga0316592_1002386 3300033524 Bacteria 3240
110 Ga0316586_1001425 3300033527 Bacteria 2741
111 Ga0316586_1003151 3300033527 Bacteria 2138
112 Ga0316588_1000966 3300033528 Bacteria 4456
113 Ga0316588_1003552 3300033528 Bacteria 2862
114 Ga0316574_0000087 3300035398 Bacteria 26351
115 Ga0316574_0004462 3300035398 Bacteria 7342
116 Ga0316574_0021012 3300035398 Bacteria 3870
117 Ga0316574_0021204 3300035398 Bacteria 3855
118 Ga0316574_0022078 3300035398 Bacteria 3788
119 Ga0373931_0027905 3300035691 Bacteria 2885
120 Ga0373937_0102895 3300036401 Bacteria 2652
121 Ga0316582_0000115 3300036647 Bacteria 22722
122 Ga0316582_0004948 3300036647 Bacteria 6809
123 Ga0316582_0033269 3300036647 Bacteria 3165
124 Ga0316582_0061797 3300036647 Bacteria 2403
125 Ga0316584_0000154 3300036712 Bacteria 31669
126 Ga0316584_0014432 3300036712 Bacteria 5623
127 Ga0316584_0055412 3300036712 Bacteria 2969
128 Ga0316584_0070619 3300036712 Bacteria 2617
129 Ga0316584_0198520 3300036712 Bacteria 1481
130 Ga0316581_0004987 3300037588 Bacteria 3421
131 Ga0316581_0014718 3300037588 Bacteria 2229
132 Ga0436364_0328296 3300037853 Bacteria 143298
133 Ga0436364_0433306 3300037853 Bacteria 4168
134 Ga0436364_1124750 3300037853 Bacteria 1755
135 Ga0400483_076476 3300039062 Bacteria 10411
136 Ga0400483_107309 3300039062 Bacteria 2081
137 Ga0436365_1508331 3300039437 Bacteria 2687
138 Ga0436365_1614440 3300039437 Bacteria 1604
139 Ga0436360_0781768 3300039438 Bacteria 11744
140 Ga0436363_1520964 3300039450 Bacteria 1782
141 Ga0436363_1656873 3300039450 Bacteria 2361
142 Ga0436362_0491027 3300039453 Bacteria 4190
143 Ga0451577_0000001 3300042876 Bacteria 2461803
144 Ga0451577_0010158 3300042876 Bacteria 9016
145 Ga0451577_0019841 3300042876 Bacteria 6176
146 Ga0451577_0020754 3300042876 Bacteria 6022
147 Ga0451577_0040860 3300042876 Bacteria 4163
148 Ga0451577_0049526 3300042876 Bacteria 3751
149 Ga0451577_0050842 3300042876 Bacteria 3699
150 Ga0451577_0063742 3300042876 Bacteria 3287
151 Ga0451577_0131898 3300042876 Bacteria 2242
152 Ga0453684_0062667 3300044712 Bacteria 4761
153 Ga0453684_0076839 3300044712 Bacteria 4190
154 Ga0453684_0295333 3300044712 Bacteria 1843
155 Ga0453684_0350587 3300044712 Bacteria 1665
156 Ga0466968_0003022 3300044735 Bacteria 6211
157 Ga0451576_0001261 3300045051 Bacteria 44384
158 Ga0451576_0003215 3300045051 Bacteria 22783
159 Ga0451576_0199163 3300045051 Bacteria 2091
160 Ga0495650_0007635 3300046471 Bacteria 6457
161 Ga0495606_0117828 3300046507 Bacteria 1593
162 Ga0495610_0023048 3300046512 Bacteria 3392
163 Ga0495684_0110214 3300047471 Bacteria 2078
164 Ga0495686_0003692 3300047472 Bacteria 13079
165 Ga0496101_0242227 3300048904 Bacteria 1404
166 Ga0496109_0021457 3300048912 Bacteria 5711
167 Ga0496109_0038102 3300048912 Bacteria 4345
168 Ga0496110_0179407 3300048913 Bacteria 1923
169 Ga0496121_0011690 3300048924 Bacteria 9695
170 Ga0501300_003819 3300049523 Bacteria 2242
171 Ga0501034_0263049 3300049571 Bacteria 1667
172 Ga0501036_0072493 3300049572 Bacteria 2911
173 Ga0501039_0020303 3300049575 Bacteria 5092
174 Ga0501043_0062939 3300049579 Bacteria 2913
175 Ga0501280_001672 3300049776 Bacteria 3955
176 nmdc:mga0yw44_24220_c1 3300050492 Bacteria 3432
177 nmdc:mga0yw44_71475_c1 3300050492 Bacteria 2154
178 Ga0500635_0000034 3300053080 Bacteria 96919
179 Ga0500651_0026175 3300053093 Bacteria 3664
180 Ga0500641_0004321 3300053096 Bacteria 5014
181 Ga0500641_0007629 3300053096 Bacteria 3858
182 Ga0500654_113225 3300053099 Bacteria 1101
183 Ga0500594_0003997 3300053118 Bacteria 3249
184 Ga0500614_006158 3300053123 Bacteria 2521
185 Ga0500559_0000109 3300053136 Bacteria 65246
186 Ga0500559_0004317 3300053136 Bacteria 6789
187 Ga0500577_0000235 3300053142 Bacteria 14718
188 Ga0500589_000253 3300053147 Bacteria 10579
189 Ga0500622_0031898 3300053156 Bacteria 2764
190 2545674124 2545555834 Bacteria 8130841
191 2596371362 2595698237 Bacteria 6712432
192 2643937312 2643221585 Bacteria 5812563
193 2644301485 2643221654 Bacteria 5273570
194 2644318477 2643221656 Bacteria 5809961
195 2644338227 2643221660 Bacteria 4208257
196 2738708948 2738541275 Bacteria 4830863
197 2738847373 2738541301 Bacteria 4834102
198 2738863102 2738541304 Bacteria 4833665
199 2739295620 2738543022 Bacteria 4835059
200 2739357298 2738543033 Bacteria 4833336
201 2842336645 2842333319 Bacteria 8899485
202 2844315639 2844315083 Bacteria 8138177
203 2861692876 2861691609 Bacteria 5628931
204 2888389531 2888388044 Bacteria 7304136
205 2889306700 2889306138 Bacteria 6358934
206 2902332301 2902330777 Bacteria 6395352
207 2902409652 2902405164 Bacteria 6784948
208 2903732667 2903727486 Bacteria 8281579
209 2906605435 2906602504 Bacteria 8295279
210 2928102294 2928100450 Bacteria 4837635
211 2928126296 2928125067 Bacteria 5937560
212 2928961204 2928959182 Bacteria 4725774
213 641643898 641522639 Bacteria 7737025
214 Ga0451577_0003807
215 Ga0065165_1000694
216 Ga0065165_1024859
217 Ga0070658_10017278
218 Ga0070658_10337482
219 Ga0070668_100018274
220 Ga0070671_100193767
221 Ga0070673_100026943
222 Ga0070672_100101941
223 Ga0070665_100003595
224 Ga0070665_100012151
225 Ga0070665_100153363
226 Ga0070665_100401573
227 Ga0068859_100122714
228 Ga0068864_100401765
229 Ga0068861_100081194
230 Ga0068862_100102828
231 Ga0081540_1001444
232 Ga0081540_1031043
233 Ga0075365_10028296
234 Ga0075365_10054691
235 Ga0075363_100114228
236 Ga0075367_10080087
237 Ga0097621_100086020
238 Ga0068871_100225205
239 Ga0097620_100122718
240 Ga0105240_10126521
241 Ga0105243_10337608
242 Ga0105248_10148122
243 Ga0105238_10096073
244 Ga0105249_10056177
245 Ga0163163_10046267
246 Ga0163163_10090654
247 Ga0157380_10350489
248 Ga0213875_10001417
249 Ga0213871_10015565
250 Ga0209758_1000557
251 Ga0209758_1016600
252 Ga0209256_1027550
253 Ga0207426_1000328
254 Ga0207426_1012558
255 Ga0207705_10012940
256 Ga0207695_10045728
257 Ga0207712_10070673
258 Ga0207668_10087441
259 Ga0207639_10331786
260 Ga0207678_10074619
261 Ga0207702_10276171
262 Ga0207675_100143051
263 Ga0209968_1003506
264 Ga0209966_1000013
265 Ga0268266_10000539
266 Ga0268266_10036071
267 Ga0268265_10099900
268 Ga0268264_10044860
269 Ga0265332_10001180
270 Ga0265328_10000102
271 Ga0265328_10011873
272 Ga0265325_10000622
273 Ga0265340_10026579
274 Ga0265339_10021365
275 Ga0265331_10001308
276 Ga0265331_10012113
277 Ga0265327_10000613
278 Ga0265327_10009227
279 Ga0265316_10010270
280 Ga0265316_10020016
281 Ga0265316_10288620
282 Ga0265313_10001758
283 Ga0316575_10001186
284 Ga0316575_10001332
285 Ga0316575_10035304
286 Ga0316579_10000138
287 Ga0316579_10019310
288 Ga0316579_10040075
289 Ga0265342_10000087
290 Ga0265342_10017852
291 Ga0316576_10000319
292 Ga0316576_10000993
293 Ga0316576_10001976
294 Ga0316576_10009755
295 Ga0316576_10012203
296 Ga0316576_10025065
297 Ga0316576_10028674
298 Ga0316576_10037040
299 Ga0316576_10068909
300 Ga0316576_10138549
301 Ga0316576_10245992
302 Ga0316578_10000010
303 Ga0316578_10003725
304 Ga0316578_10008801
305 Ga0316578_10032942
306 Ga0316578_10063180
307 Ga0316578_10070939
308 Ga0316578_10096161
309 Ga0316578_10149002
310 Ga0316577_10000056
311 Ga0316577_10000984
312 Ga0316577_10133778
313 Ga0316583_10004787
314 Ga0316585_10000797
315 Ga0316585_10000814
316 Ga0316585_10001557
317 Ga0316580_10000236
318 Ga0316580_10010895
319 Ga0316593_10004335
320 Ga0307510_10006920
321 Ga0307510_10183887
322 Ga0316592_1002386
323 Ga0316586_1001425
324 Ga0316586_1003151
325 Ga0316588_1000966
326 Ga0316588_1003552
327 Ga0316574_0000087
328 Ga0316574_0004462
329 Ga0316574_0021012
330 Ga0316574_0021204
331 Ga0316574_0022078
332 Ga0373931_0027905
333 Ga0373937_0102895
334 Ga0316582_0000115
335 Ga0316582_0004948
336 Ga0316582_0033269
337 Ga0316582_0061797
338 Ga0316584_0000154
339 Ga0316584_0014432
340 Ga0316584_0055412
341 Ga0316584_0070619
342 Ga0316584_0198520
343 Ga0316581_0004987
344 Ga0316581_0014718
345 Ga0436364_0328296
346 Ga0436364_0433306
347 Ga0436364_1124750
348 Ga0400483_076476
349 Ga0400483_107309
350 Ga0436365_1508331
351 Ga0436365_1614440
352 Ga0436360_0781768
353 Ga0436363_1520964
354 Ga0436363_1656873
355 Ga0436362_0491027
356 Ga0451577_0000001
357 Ga0451577_0010158
358 Ga0451577_0019841
359 Ga0451577_0020754
360 Ga0451577_0040860
361 Ga0451577_0049526
362 Ga0451577_0050842
363 Ga0451577_0063742
364 Ga0451577_0131898
365 Ga0453684_0062667
366 Ga0453684_0076839
367 Ga0453684_0295333
368 Ga0453684_0350587
369 Ga0466968_0003022
370 Ga0451576_0001261
371 Ga0451576_0003215
372 Ga0451576_0199163
373 Ga0495650_0007635
374 Ga0495606_0117828
375 Ga0495610_0023048
376 Ga0495684_0110214
377 Ga0495686_0003692
378 Ga0496101_0242227
379 Ga0496109_0021457
380 Ga0496109_0038102
381 Ga0496110_0179407
382 Ga0496121_0011690
383 Ga0501300_003819
384 Ga0501034_0263049
385 Ga0501036_0072493
386 Ga0501039_0020303
387 Ga0501043_0062939
388 Ga0501280_001672
389 nmdc:mga0yw44_24220_c1
390 nmdc:mga0yw44_71475_c1
391 Ga0500635_0000034
392 Ga0500651_0026175
393 Ga0500641_0004321
394 Ga0500641_0007629
395 Ga0500654_113225
396 Ga0500594_0003997
397 Ga0500614_006158
398 Ga0500559_0000109
399 Ga0500559_0004317
400 Ga0500577_0000235
401 Ga0500589_000253
402 Ga0500622_0031898
403 2545674124
404 2596371362
405 2643937312
406 2644301485
407 2644318477
408 2644338227
409 2738708948
410 2738847373
411 2738863102
412 2739295620
413 2739357298
414 2842336645
415 2844315639
416 2861692876
417 2888389531
418 2889306700
419 2902332301
420 2902409652
421 2903732667
422 2906605435
423 2928102294
424 2928126296
425 2928961204
426 641643898

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02915

Rubrerythrin

Rubrerythrin

141

272

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
6sv1-assembly3.cif.gz_c crystal structure of rhodospirillum rubrum rru_a0973 e34a variant 0.8156 71 138
7s5c-assembly1.cif.gz_D m. xanthus ferritin-like protein encb 0.8146 75 137
5n5f-assembly1.cif.gz_G crystal structure of haliangium ochraceum encapsulated ferritin 0.8103 71 138
5n5f-assembly1.cif.gz_B crystal structure of haliangium ochraceum encapsulated ferritin 0.7993 71 139
6suw-assembly1.cif.gz_F crystal structure of rhodospirillum rubrum rru_a0973 e31a variant 0.7812 65 138
ID Description Score Start End Superfamily
af_A0A1D6MQX6_131_264_1.10.620.20 Mainly Alpha;Orthogonal Bundle;Ribonucleotide Reductase, subunit A;Ribonucleotide Reductase, subunit A 0.9649 87 216 1.10.620.20
af_K7USR3_267_408_1.10.620.20 Mainly Alpha;Orthogonal Bundle;Ribonucleotide Reductase, subunit A;Ribonucleotide Reductase, subunit A 0.9497 219 342 1.10.620.20
af_A0A1D6MQX6_131_264_1.10.620.20 Mainly Alpha;Orthogonal Bundle;Ribonucleotide Reductase, subunit A;Ribonucleotide Reductase, subunit A 0.9301 87 216 1.10.620.20
af_Q9SDJ2_1_408_1.10.620.20 Mainly Alpha;Orthogonal Bundle;Ribonucleotide Reductase, subunit A;Ribonucleotide Reductase, subunit A 0.8908 2 353 1.10.620.20
af_Q9SDJ2_1_408_1.10.620.20 Mainly Alpha;Orthogonal Bundle;Ribonucleotide Reductase, subunit A;Ribonucleotide Reductase, subunit A 0.8835 2 353 1.10.620.20
ID Description Score Start End GO Terms
AF-A0A520I2E6-F1-model_v4 Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (EC 1.14.13.81) 0.9875 72 354 GO:0015979
GO:0015995
GO:0046872
GO:0048529
AF-A0A2N3DN12-F1-model_v4 Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (EC 1.14.13.81) 0.9851 96 354 GO:0015979
GO:0015995
GO:0046872
GO:0048529
AF-A0A520I2E6-F1-model_v4 Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (EC 1.14.13.81) 0.984 72 354 GO:0015979
GO:0015995
GO:0046872
GO:0048529
AF-A0A4Q3MWP2-F1-model_v4 Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (EC 1.14.13.81) 0.9835 183 354 GO:0015979
GO:0015995
GO:0046872
GO:0048529
AF-A0A258LBM1-F1-model_v4 Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase (EC 1.14.13.81) 0.9819 159 354 GO:0015979
GO:0015995
GO:0046872
GO:0048529

Map