F324197

General Info

Members Datasets Scaffolds Average Seq Length
213 148 426 431

Family's Representative Sequence

Representative Sequence 3300031251|Ga0265327_10000524|Ga0265327_1000052452
Length 480
Sequence VSSMLFAHEGEPAGSPGQRESAFGHVPSGTSHTVAVIGVGYVGLPTAATLAHLGHRVTCGDADPAKVAMLQRGEVPIVEERLEELVREGQEAGNLRFVLGATAAVEGAEFVFLCVPTPQGDDGSADLSYVEAVASEIGPHLAPGTVIVNKSTVPVGSTLVVERVLGRTDVQVVSNPEFLREGTAVPDSLHPERIVVGADDQGAAARVGELFAGTQAPLLITDAATAETIKYASNAFLATKLSFVNAVASLCEAVGADVRDVILGLGYDKRIGFEFMKPGPGWGGSCLPKDTRALVHIAEQAGYDFSFLKGAIATNDEQFERVVAKVRTAVAPTLPADPAAGGDFAGAVVAVWGLTFKAGTDDLRNSPAVEVALRLAEEGAEVRAYDPTVKVPEGAGSVAVPGFPVPDGWSGSLSAYPDAYTACQGAAAVVVLTEWDEFRWLDFAKVRDALVAPVFVDARNLLDPAQVRRLGFSYVGIGRR

Samples

Sample ID Description Type Environment
1 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
26 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
29 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
30 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
31 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
32 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
33 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
34 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
46 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
47 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
48 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
49 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
50 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
51 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
52 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
55 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
56 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
57 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
58 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
59 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
60 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
61 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
62 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
63 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
64 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
65 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
66 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
69 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
70 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
71 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
78 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
79 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
80 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
81 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
82 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
83 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
84 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
85 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
86 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
87 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
88 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
89 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
90 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
91 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
94 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
95 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
106 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
107 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
108 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
109 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
110 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
116 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
117 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
118 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
119 2582580736 Prauserella sp. Am3 Isolate Unclassified
120 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
121 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
122 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
123 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
124 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
125 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
126 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
127 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
128 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
129 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
130 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
131 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
132 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
133 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
134 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
135 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
136 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
137 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
138 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
139 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
140 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
141 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
142 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
143 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
144 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
145 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
146 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
147 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
148 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.75
Metatranscriptomes 0
Isolates 19.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.35
Nodule 0
Rhizoplane 5.16
Rhizosphere 67.61
Stem 0
Stem Tuber 0.47
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265327_10000524 3300031251 Bacteria 66279
2 LJQas_1001447 3300000549 Bacteria 3537
3 JGI25406J46586_10001559 3300003203 Bacteria 10810
4 Ga0070682_100114428 3300005337 Bacteria 1803
5 Ga0070668_100001170 3300005347 Bacteria 18552
6 Ga0070671_100006781 3300005355 Bacteria 9163
7 Ga0070709_10003407 3300005434 Bacteria 8535
8 Ga0070710_10000837 3300005437 Bacteria 14799
9 Ga0070710_10031350 3300005437 Bacteria 2869
10 Ga0070711_100013476 3300005439 Bacteria 5134
11 Ga0070700_100127997 3300005441 Bacteria 1710
12 Ga0070663_100000404 3300005455 Bacteria 22634
13 Ga0070663_100000591 3300005455 Bacteria 19291
14 Ga0070663_100005294 3300005455 Bacteria 7653
15 Ga0070706_100001827 3300005467 Bacteria 22044
16 Ga0070665_100001193 3300005548 Bacteria 31682
17 Ga0068856_100232919 3300005614 Bacteria 1857
18 Ga0068852_100091818 3300005616 Bacteria 2718
19 Ga0068863_100007471 3300005841 Bacteria 10697
20 Ga0068858_100053590 3300005842 Bacteria 3731
21 Ga0068862_100115250 3300005844 Bacteria 2363
22 Ga0081455_10000487 3300005937 Bacteria 51494
23 Ga0081455_10072434 3300005937 Bacteria 2852
24 Ga0081539_10000401 3300005985 Bacteria 92875
25 Ga0070717_10048680 3300006028 Bacteria 3478
26 Ga0070717_10056612 3300006028 Bacteria 3240
27 Ga0075364_10018528 3300006051 Bacteria 4359
28 Ga0070716_100118447 3300006173 Bacteria 1653
29 Ga0070712_100000579 3300006175 Archaea 21337
30 Ga0075369_10002309 3300006186 Bacteria 6782
31 Ga0105247_10023676 3300009101 Bacteria 3700
32 Ga0105248_10101143 3300009177 Bacteria 3249
33 Ga0105033_101275 3300009986 Bacteria 2048
34 Ga0163162_10316357 3300013306 Bacteria 1694
35 Ga0157379_10009009 3300014968 Bacteria 8699
36 Ga0157379_10105915 3300014968 Bacteria 2524
37 Ga0213873_10000033 3300021358 Bacteria 36320
38 Ga0213875_10001076 3300021388 Bacteria 19111
39 Ga0213875_10012175 3300021388 Bacteria 4254
40 Ga0207426_1006397 3300025302 Bacteria 5132
41 Ga0207426_1032807 3300025302 Bacteria 1680
42 Ga0209051_1004180 3300025303 Bacteria 9020
43 Ga0207692_10000869 3300025898 Bacteria 10879
44 Ga0207692_10011414 3300025898 Bacteria 3780
45 Ga0207684_10007379 3300025910 Bacteria 9912
46 Ga0207693_10001410 3300025915 Archaea 21319
47 Ga0207644_10005869 3300025931 Bacteria 8005
48 Ga0207665_10067975 3300025939 Bacteria 2427
49 Ga0207678_10000062 3300026067 Bacteria 84389
50 Ga0207678_10000069 3300026067 Bacteria 81395
51 Ga0207678_10000379 3300026067 Bacteria 40530
52 Ga0207708_10036741 3300026075 Bacteria 3730
53 Ga0207641_10006676 3300026088 Bacteria 9684
54 Ga0207698_10040083 3300026142 Bacteria 3476
55 Ga0268266_10004894 3300028379 Bacteria 12705
56 Ga0307515_10028938 3300028794 Bacteria 9391
57 Ga0307512_10008720 3300030522 Bacteria 9851
58 Ga0316177_1035061 3300030731 Bacteria 9976
59 Ga0316177_1089472 3300030731 Bacteria 3317
60 Ga0316176_1223203 3300030732 Bacteria 4072
61 Ga0316176_1227362 3300030732 Bacteria 6287
62 Ga0314311_1040608 3300030733 Bacteria 4367
63 Ga0314311_1143560 3300030733 Bacteria 6883
64 Ga0265327_10002962 3300031251 Bacteria 16955
65 Ga0307508_10053175 3300031616 Bacteria 3595
66 Ga0307514_10002529 3300031649 Bacteria 18895
67 Ga0307516_10005355 3300031730 Bacteria 15420
68 Ga0307516_10092729 3300031730 Bacteria 2847
69 Ga0307413_10095632 3300031824 Bacteria 1948
70 Ga0307518_10000119 3300031838 Bacteria 55173
71 Ga0307518_10000143 3300031838 Bacteria 52098
72 Ga0307518_10002146 3300031838 Bacteria 14473
73 Ga0307518_10060825 3300031838 Bacteria 2743
74 Ga0307409_100213946 3300031995 Bacteria 1735
75 Ga0307411_10001617 3300032005 Bacteria 9383
76 Ga0307507_10137784 3300033179 Bacteria 1883
77 Ga0307510_10069243 3300033180 Bacteria 3536
78 Ga0395898_0009538 3300037466 Bacteria 10192
79 Ga0436364_0056819 3300037853 Bacteria 19807
80 Ga0436364_0509908 3300037853 Bacteria 46889
81 Ga0436365_1528081 3300039437 Bacteria 1530
82 Ga0436362_0551347 3300039453 Bacteria 47047
83 Ga0466972_0005241 3300044658 Bacteria 6489
84 Ga0466972_0007809 3300044658 Bacteria 5367
85 Ga0466972_0016698 3300044658 Bacteria 3670
86 Ga0466972_0027859 3300044658 Bacteria 2793
87 Ga0466965_0000306 3300044683 Bacteria 16341
88 Ga0466965_0000757 3300044683 Bacteria 12139
89 Ga0466965_0000771 3300044683 Bacteria 12057
90 Ga0466965_0026746 3300044683 Bacteria 2797
91 Ga0466965_0073873 3300044683 Bacteria 1717
92 Ga0466966_0000452 3300044684 Bacteria 26465
93 Ga0466961_0021209 3300044693 Bacteria 4182
94 Ga0466963_0000361 3300044694 Bacteria 20646
95 Ga0466963_0023581 3300044694 Bacteria 3910
96 Ga0466963_0106446 3300044694 Bacteria 1923
97 Ga0466964_0026364 3300044706 Bacteria 2275
98 Ga0466971_0013570 3300044719 Bacteria 3580
99 Ga0466968_0000630 3300044735 Bacteria 12055
100 Ga0466968_0004384 3300044735 Bacteria 5271
101 Ga0466968_0011975 3300044735 Bacteria 3387
102 Ga0466968_0053383 3300044735 Bacteria 1731
103 Ga0466970_0011507 3300044765 Bacteria 4510
104 Ga0466970_0042050 3300044765 Bacteria 2430
105 Ga0466970_0057871 3300044765 Bacteria 2073
106 Ga0466970_0070664 3300044765 Bacteria 1877
107 Ga0466970_0094831 3300044765 Bacteria 1622
108 Ga0466957_0006395 3300044842 Bacteria 6652
109 Ga0466957_0082195 3300044842 Bacteria 2007
110 Ga0466960_0000214 3300044901 Bacteria 19903
111 Ga0466960_0000550 3300044901 Bacteria 12898
112 Ga0466960_0006126 3300044901 Bacteria 4812
113 Ga0466960_0041887 3300044901 Bacteria 2171
114 Ga0466959_0019012 3300045049 Bacteria 5049
115 Ga0466959_0031477 3300045049 Bacteria 3924
116 Ga0466959_0072470 3300045049 Bacteria 2493
117 Ga0466958_0000223 3300045836 Bacteria 21402
118 Ga0466958_0014488 3300045836 Bacteria 4502
119 Ga0466958_0131895 3300045836 Bacteria 1569
120 Ga0466967_0000459 3300045976 Bacteria 19611
121 Ga0466967_0001475 3300045976 Bacteria 13710
122 Ga0466967_0021611 3300045976 Bacteria 5231
123 Ga0466967_0025099 3300045976 Bacteria 4910
124 Ga0466967_0108326 3300045976 Bacteria 2549
125 Ga0495680_0137437 3300047322 Bacteria 1791
126 Ga0496100_0025789 3300048903 Bacteria 3596
127 Ga0496102_0000147 3300048905 Bacteria 96295
128 Ga0496102_0208770 3300048905 Bacteria 1841
129 Ga0496103_0000261 3300048906 Bacteria 50634
130 Ga0496104_0106035 3300048907 Bacteria 2693
131 Ga0496105_0087272 3300048908 Bacteria 2578
132 Ga0496108_0008216 3300048911 Bacteria 8470
133 Ga0496109_0034147 3300048912 Bacteria 4579
134 Ga0496110_0003852 3300048913 Bacteria 11558
135 Ga0496111_0080798 3300048914 Bacteria 2372
136 Ga0496116_0000425 3300048919 Bacteria 59407
137 Ga0496117_0000274 3300048920 Bacteria 96150
138 Ga0496118_0000602 3300048921 Bacteria 59438
139 Ga0496119_0000957 3300048922 Bacteria 37132
140 Ga0496120_0004930 3300048923 Bacteria 10860
141 Ga0496121_0006419 3300048924 Bacteria 14612
142 Ga0496124_0047720 3300048927 Bacteria 3662
143 Ga0496125_0017853 3300048928 Bacteria 6752
144 Ga0496126_0000419 3300048929 Bacteria 85931
145 Ga0501032_0003435 3300049569 Bacteria 12134
146 Ga0501034_0003137 3300049571 Bacteria 19031
147 Ga0501036_0027544 3300049572 Bacteria 4802
148 Ga0501036_0298244 3300049572 Bacteria 1348
149 Ga0501038_0004455 3300049574 Bacteria 13019
150 Ga0501038_0185680 3300049574 Bacteria 1676
151 Ga0501039_0001237 3300049575 Bacteria 18717
152 Ga0501039_0117663 3300049575 Bacteria 2081
153 Ga0501040_0074921 3300049576 Bacteria 2339
154 Ga0501041_0075051 3300049577 Bacteria 2079
155 Ga0501042_0154151 3300049578 Bacteria 1657
156 Ga0501043_0003679 3300049579 Bacteria 12592
157 Ga0501068_0100083 3300049584 Bacteria 1796
158 Ga0501070_0006642 3300049586 Bacteria 9847
159 Ga0501071_0077111 3300049587 Bacteria 2434
160 Ga0501072_0083563 3300049588 Bacteria 2531
161 Ga0501075_0145513 3300049591 Bacteria 1806
162 Ga0501076_0061915 3300049592 Bacteria 2979
163 Ga0501080_0341595 3300049742 Bacteria 1353
164 Ga0501044_0030486 3300049823 Bacteria 5684
165 Ga0501045_0041807 3300049824 Bacteria 3336
166 Ga0501084_0066960 3300054114 Bacteria 3006
167 Ga0501084_0180075 3300054114 Bacteria 1784
168 Ga0501082_0057306 3300060353 Bacteria 3357
169 Ga0501082_0224967 3300060353 Bacteria 1633
170 Ga0466962_0008755 3300061719 Bacteria 4853
171 Ga0466962_0128784 3300061719 Bacteria 1223
172 Ga0530510_0074200 3300061734 Bacteria 2470
173 2558910359 2558860112 Bacteria 9931328
174 2583152562 2582580736 Bacteria 5325865
175 2586057461 2585427649 Bacteria 9053857
176 2586058512 2585427649 Bacteria 9053857
177 2586059806 2585427649 Bacteria 9053857
178 2586062001 2585427649 Bacteria 9053857
179 2753069303 2751185734 Bacteria 8863695
180 2791913858 2791354901 Bacteria 8322202
181 2793981293 2791355406 Bacteria 11364898
182 2795794630 2795385472 Bacteria 6627535
183 2809585623 2808606522 Bacteria 9488490
184 2809592639 2808606522 Bacteria 9488490
185 2816506387 2816332139 Bacteria 9138787
186 2866554497 2866552031 Bacteria 5824618
187 2866612420 2866612099 Bacteria 7543886
188 2866614142 2866612099 Bacteria 7543886
189 2870728220 2870721527 Bacteria 9689237
190 2899360108 2899359706 Bacteria 10940472
191 2899363077 2899359706 Bacteria 10940472
192 2899369919 2899359706 Bacteria 10940472
193 2899376158 2899370129 Bacteria 6781179
194 2902800706 2902799365 Bacteria 5419524
195 2902839307 2902837492 Bacteria 6697721
196 2915360219 2915358134 Bacteria 6050864
197 2915774784 2915768154 Bacteria 8424322
198 2917742786 2917736166 Bacteria 9690793
199 2917744966 2917736166 Bacteria 9690793
200 2919715765 2919713450 Bacteria 7431245
201 2928146529 2928142448 Bacteria 5288925
202 2929214123 2929212328 Bacteria 7708288
203 2947224813 2947224130 Bacteria 9938529
204 2947224937 2947224130 Bacteria 9938529
205 8003314611 8003314358 Bacteria 10575343
206 8003321205 8003314358 Bacteria 10575343
207 8047901340 8047893842 Bacteria 11723082
208 8048132695 8048127548 Bacteria 11053136
209 8048357559 8048356638 Bacteria 11044339
210 8048378281 8048369669 Bacteria 11666822
211 8048387380 8048379754 Bacteria 11877923
212 8054476407 8054472261 Bacteria 7464355
213 8056214348 8056207758 Bacteria 8639239
214 Ga0265327_10000524
215 LJQas_1001447
216 JGI25406J46586_10001559
217 Ga0070682_100114428
218 Ga0070668_100001170
219 Ga0070671_100006781
220 Ga0070709_10003407
221 Ga0070710_10000837
222 Ga0070710_10031350
223 Ga0070711_100013476
224 Ga0070700_100127997
225 Ga0070663_100000404
226 Ga0070663_100000591
227 Ga0070663_100005294
228 Ga0070706_100001827
229 Ga0070665_100001193
230 Ga0068856_100232919
231 Ga0068852_100091818
232 Ga0068863_100007471
233 Ga0068858_100053590
234 Ga0068862_100115250
235 Ga0081455_10000487
236 Ga0081455_10072434
237 Ga0081539_10000401
238 Ga0070717_10048680
239 Ga0070717_10056612
240 Ga0075364_10018528
241 Ga0070716_100118447
242 Ga0070712_100000579
243 Ga0075369_10002309
244 Ga0105247_10023676
245 Ga0105248_10101143
246 Ga0105033_101275
247 Ga0163162_10316357
248 Ga0157379_10009009
249 Ga0157379_10105915
250 Ga0213873_10000033
251 Ga0213875_10001076
252 Ga0213875_10012175
253 Ga0207426_1006397
254 Ga0207426_1032807
255 Ga0209051_1004180
256 Ga0207692_10000869
257 Ga0207692_10011414
258 Ga0207684_10007379
259 Ga0207693_10001410
260 Ga0207644_10005869
261 Ga0207665_10067975
262 Ga0207678_10000062
263 Ga0207678_10000069
264 Ga0207678_10000379
265 Ga0207708_10036741
266 Ga0207641_10006676
267 Ga0207698_10040083
268 Ga0268266_10004894
269 Ga0307515_10028938
270 Ga0307512_10008720
271 Ga0316177_1035061
272 Ga0316177_1089472
273 Ga0316176_1223203
274 Ga0316176_1227362
275 Ga0314311_1040608
276 Ga0314311_1143560
277 Ga0265327_10002962
278 Ga0307508_10053175
279 Ga0307514_10002529
280 Ga0307516_10005355
281 Ga0307516_10092729
282 Ga0307413_10095632
283 Ga0307518_10000119
284 Ga0307518_10000143
285 Ga0307518_10002146
286 Ga0307518_10060825
287 Ga0307409_100213946
288 Ga0307411_10001617
289 Ga0307507_10137784
290 Ga0307510_10069243
291 Ga0395898_0009538
292 Ga0436364_0056819
293 Ga0436364_0509908
294 Ga0436365_1528081
295 Ga0436362_0551347
296 Ga0466972_0005241
297 Ga0466972_0007809
298 Ga0466972_0016698
299 Ga0466972_0027859
300 Ga0466965_0000306
301 Ga0466965_0000757
302 Ga0466965_0000771
303 Ga0466965_0026746
304 Ga0466965_0073873
305 Ga0466966_0000452
306 Ga0466961_0021209
307 Ga0466963_0000361
308 Ga0466963_0023581
309 Ga0466963_0106446
310 Ga0466964_0026364
311 Ga0466971_0013570
312 Ga0466968_0000630
313 Ga0466968_0004384
314 Ga0466968_0011975
315 Ga0466968_0053383
316 Ga0466970_0011507
317 Ga0466970_0042050
318 Ga0466970_0057871
319 Ga0466970_0070664
320 Ga0466970_0094831
321 Ga0466957_0006395
322 Ga0466957_0082195
323 Ga0466960_0000214
324 Ga0466960_0000550
325 Ga0466960_0006126
326 Ga0466960_0041887
327 Ga0466959_0019012
328 Ga0466959_0031477
329 Ga0466959_0072470
330 Ga0466958_0000223
331 Ga0466958_0014488
332 Ga0466958_0131895
333 Ga0466967_0000459
334 Ga0466967_0001475
335 Ga0466967_0021611
336 Ga0466967_0025099
337 Ga0466967_0108326
338 Ga0495680_0137437
339 Ga0496100_0025789
340 Ga0496102_0000147
341 Ga0496102_0208770
342 Ga0496103_0000261
343 Ga0496104_0106035
344 Ga0496105_0087272
345 Ga0496108_0008216
346 Ga0496109_0034147
347 Ga0496110_0003852
348 Ga0496111_0080798
349 Ga0496116_0000425
350 Ga0496117_0000274
351 Ga0496118_0000602
352 Ga0496119_0000957
353 Ga0496120_0004930
354 Ga0496121_0006419
355 Ga0496124_0047720
356 Ga0496125_0017853
357 Ga0496126_0000419
358 Ga0501032_0003435
359 Ga0501034_0003137
360 Ga0501036_0027544
361 Ga0501036_0298244
362 Ga0501038_0004455
363 Ga0501038_0185680
364 Ga0501039_0001237
365 Ga0501039_0117663
366 Ga0501040_0074921
367 Ga0501041_0075051
368 Ga0501042_0154151
369 Ga0501043_0003679
370 Ga0501068_0100083
371 Ga0501070_0006642
372 Ga0501071_0077111
373 Ga0501072_0083563
374 Ga0501075_0145513
375 Ga0501076_0061915
376 Ga0501080_0341595
377 Ga0501044_0030486
378 Ga0501045_0041807
379 Ga0501084_0066960
380 Ga0501084_0180075
381 Ga0501082_0057306
382 Ga0501082_0224967
383 Ga0466962_0008755
384 Ga0466962_0128784
385 Ga0530510_0074200
386 2558910359
387 2583152562
388 2586057461
389 2586058512
390 2586059806
391 2586062001
392 2753069303
393 2791913858
394 2793981293
395 2795794630
396 2809585623
397 2809592639
398 2816506387
399 2866554497
400 2866612420
401 2866614142
402 2870728220
403 2899360108
404 2899363077
405 2899369919
406 2899376158
407 2902800706
408 2902839307
409 2915360219
410 2915774784
411 2917742786
412 2917744966
413 2919715765
414 2928146529
415 2929214123
416 2947224813
417 2947224937
418 8003314611
419 8003321205
420 8047901340
421 8048132695
422 8048357559
423 8048378281
424 8048387380
425 8054476407
426 8056214348

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00984

UDPG_MGDP_dh

UDP-glucose/GDP-mannose dehydrogenase family, central domain

224

317

0.98

PF03720

UDPG_MGDP_dh_C

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

350

464

0.95

PF03721

UDPG_MGDP_dh_N

UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

32

210

0.95

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

33

176

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ka7-assembly1.cif.gz_A crystal structure of an oxidoreductase from methanosarcina mazei. northeast structural genomics consortium target id mar208 0.9724 4 36
3int-assembly3.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (reduced) 0.9581 2 34
7fgp-assembly1.cif.gz_A crystal structure of aureimonas altamirenisis flavin-containing opine dehydrogenase (fad-bound form) 0.9551 2 35
3gf4-assembly1.cif.gz_A structure of udp-galactopyranose mutase bound to udp-glucose 0.9518 2 34
3inr-assembly1.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (oxidized) 0.9516 2 34
ID Description Score Start End Superfamily
2e5vA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9882 6 35 3.50.50.60
af_Q8VYV2_23_370_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.984 7 33 3.50.50.60
af_A4HWA7_1_176_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9712 4 34 3.50.50.60
5eowA00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9626 4 34 3.50.50.60
af_A0A1D6E7M3_47_537_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9573 6 34 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A359F1V7-F1-model_v4 UDP-glucose 6-dehydrogenase 1.006 2 71 GO:0016616
GO:0051287
AF-A0A522LC47-F1-model_v4 UDP-glucose 6-dehydrogenase 0.9976 4 70 GO:0016616
GO:0051287
AF-A0A1H5TZH5-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 0.9937 4 70 GO:0016616
GO:0051287
AF-A0A359F1V7-F1-model_v4 UDP-glucose 6-dehydrogenase 0.9915 2 71 GO:0016616
GO:0051287
AF-A0A7X5WRR2-F1-model_v4 Nucleotide sugar dehydrogenase 0.9887 2 205 GO:0000271
GO:0016616
GO:0016628
GO:0051287

Map