F323681

General Info

Members Datasets Scaffolds Average Seq Length
213 160 212 680

Family's Representative Sequence

Representative Sequence 3300005340|Ga0070689_100000383|Ga0070689_10000038321
Length 718
Sequence MSANLLVELFTEELPPKSLRQLGEAFAGGVVEGLKTSGLLDATSKSKSFATPRRLAVYITSVLPKAADRPVEQKLMPVAVARKSDGNWSDALVKKLAAMGREQLATAPVNTKIGSDSLTVKPDGKGESVYLRTLALGQSVEESLSMAIEASIAGLPILKVMSYQLADGATTVRFVRPAHGLVVLHGDKVLAVSALGLTAGRVTHGHRFQGAKDISLDRADEYEARLENQKEGHVIADFDTRKREVAKQLAEKSNALGSSLGDEAHYLTLLEEVTALVEYPAVYIGEFEADFLSVPQECLILTMRQNQKYFPLFDASAKLTNNFLIVSNMLLADSRNIVEGNQRVIRPRLADARFFFETDKKTKLANRVAQLGSVVYHNKLGTQLDRVERVRILAMRVAEKIGADPALADRAALLAKADLGTNMVGEFPELQGIMGRYYALADGENLQVAAAIGDQYRIRVDENVNTANLVALSLFVADRVETLVGIWGIGLLPTGEKDPFGLRRAALGLLSAFDLLGAKARLSHQPFPLRLEDLLQQAAGLFLPGVIAEGTASAVMEFVYERYRNQLASHYDRNAVEAVIALRPPLDEVISRIEAVCEFEKLPEASSLAAANKRIGNILKKTDSAVSVVDPALFTEPAEKALAMVVEKVRPDIQSRFSARDYAGTLKVLAQTREPVDLFFNEVMVMAEDPVLRANRISLLRELHGLMNQVADISRLAA

Samples

Sample ID Description Type Environment
1 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
93 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
94 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
95 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
98 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
99 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
100 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
101 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
102 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
103 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
104 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
105 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
108 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
109 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
110 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
111 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
112 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
115 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
116 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
117 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
124 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
125 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
126 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
127 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
128 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
129 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
130 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
131 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
132 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.53
Metatranscriptomes 0
Isolates 0.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.47
Nodule 0
Rhizoplane 2.35
Rhizosphere 96.71
Stem 0
Stem Tuber 0
Unclassified 0.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100003958 3300005330 Bacteria 8181
2 Ga0070670_100024540 3300005331 Bacteria 5184
3 Ga0070670_100078822 3300005331 Bacteria 2830
4 Ga0068868_100011122 3300005338 Bacteria 6549
5 Ga0070689_100000383 3300005340 Bacteria 25925
6 Ga0070669_100008805 3300005353 Bacteria 7199
7 Ga0070671_100002688 3300005355 Bacteria 13785
8 Ga0070673_100001706 3300005364 Bacteria 13051
9 Ga0070667_100058823 3300005367 Bacteria 3250
10 Ga0070701_10007230 3300005438 Bacteria 4726
11 Ga0070705_100014965 3300005440 Bacteria 4002
12 Ga0070705_100025505 3300005440 Bacteria 3206
13 Ga0070700_100000746 3300005441 Bacteria 16006
14 Ga0070700_100003564 3300005441 Bacteria 8042
15 Ga0070678_100061915 3300005456 Bacteria 2760
16 Ga0070681_10002119 3300005458 Bacteria 18014
17 Ga0068867_100003201 3300005459 Bacteria 11543
18 Ga0068867_100012966 3300005459 Bacteria 5898
19 Ga0068867_100054175 3300005459 Bacteria 2963
20 Ga0070699_100082789 3300005518 Bacteria 2798
21 Ga0070679_100135217 3300005530 Bacteria 2447
22 Ga0070672_100001767 3300005543 Bacteria 13509
23 Ga0070686_100000740 3300005544 Bacteria 18920
24 Ga0070695_100000692 3300005545 Bacteria 18036
25 Ga0070696_100022306 3300005546 Bacteria 4300
26 Ga0070704_100000303 3300005549 Bacteria 21834
27 Ga0070704_100094924 3300005549 Bacteria 2233
28 Ga0068855_100028597 3300005563 Bacteria 6669
29 Ga0070702_100003111 3300005615 Bacteria 7350
30 Ga0070702_100024588 3300005615 Bacteria 3215
31 Ga0068852_100001889 3300005616 Bacteria 14267
32 Ga0068852_100020421 3300005616 Bacteria 5268
33 Ga0068859_100004756 3300005617 Bacteria 13806
34 Ga0068866_10002120 3300005718 Bacteria 8255
35 Ga0068861_100002984 3300005719 Bacteria 11167
36 Ga0068861_100003457 3300005719 Bacteria 10487
37 Ga0068851_10003710 3300005834 Bacteria 6822
38 Ga0068863_100125714 3300005841 Bacteria 2446
39 Ga0068858_100002485 3300005842 Bacteria 18611
40 Ga0068862_100011607 3300005844 Bacteria 7268
41 Ga0075364_10000833 3300006051 Bacteria 16268
42 Ga0070716_100016149 3300006173 Bacteria 3849
43 Ga0097621_100002878 3300006237 Bacteria 11808
44 Ga0097621_100081719 3300006237 Bacteria 2690
45 Ga0068871_100052804 3300006358 Bacteria 3293
46 Ga0075430_100000168 3300006846 Bacteria 43228
47 Ga0075430_100015290 3300006846 Bacteria 6535
48 Ga0075431_100044508 3300006847 Bacteria 4579
49 Ga0075433_10027143 3300006852 Bacteria 4854
50 Ga0075429_100000015 3300006880 Bacteria 78823
51 Ga0075429_100010790 3300006880 Bacteria 7900
52 Ga0075436_100071813 3300006914 Bacteria 2394
53 Ga0097620_100004756 3300006931 Bacteria 13806
54 Ga0075435_100000811 3300007076 Bacteria 19470
55 Ga0099794_10001346 3300007265 Bacteria 8525
56 Ga0105240_10042328 3300009093 Bacteria 5804
57 Ga0111539_10072184 3300009094 Bacteria 4071
58 Ga0114129_10013321 3300009147 Bacteria 11719
59 Ga0114129_10150999 3300009147 Bacteria 3179
60 Ga0105243_10004473 3300009148 Bacteria 11051
61 Ga0105243_10019638 3300009148 Bacteria 5123
62 Ga0105241_10013590 3300009174 Bacteria 5966
63 Ga0105249_10036317 3300009553 Bacteria 4469
64 Ga0105249_10086218 3300009553 Bacteria 2928
65 Ga0157374_10041214 3300013296 Bacteria 4254
66 Ga0157378_10001155 3300013297 Bacteria 24013
67 Ga0157378_10011184 3300013297 Bacteria 7851
68 Ga0157372_10116621 3300013307 Bacteria 3062
69 Ga0157375_10010449 3300013308 Bacteria 8168
70 Ga0157380_10050136 3300014326 Bacteria 3296
71 Ga0157377_10021382 3300014745 Bacteria 3403
72 Ga0163161_10056973 3300017792 Bacteria 2839
73 Ga0207656_10000780 3300025321 Bacteria 10440
74 Ga0207682_10000844 3300025893 Bacteria 14204
75 Ga0207642_10002640 3300025899 Bacteria 5589
76 Ga0207643_10004018 3300025908 Bacteria 7915
77 Ga0207643_10012957 3300025908 Bacteria 4509
78 Ga0207705_10021010 3300025909 Bacteria 4658
79 Ga0207705_10060066 3300025909 Bacteria 2745
80 Ga0207707_10006438 3300025912 Bacteria 10255
81 Ga0207695_10030603 3300025913 Bacteria 5922
82 Ga0207662_10002421 3300025918 Bacteria 9364
83 Ga0207649_10013019 3300025920 Bacteria 4637
84 Ga0207681_10008569 3300025923 Bacteria 6244
85 Ga0207694_10098278 3300025924 Bacteria 2317
86 Ga0207650_10023704 3300025925 Bacteria 4357
87 Ga0207650_10028284 3300025925 Bacteria 4018
88 Ga0207644_10009891 3300025931 Bacteria 6274
89 Ga0207704_10015507 3300025938 Bacteria 3885
90 Ga0207665_10000689 3300025939 Bacteria 22862
91 Ga0207691_10001095 3300025940 Bacteria 26926
92 Ga0207691_10062504 3300025940 Bacteria 3378
93 Ga0207689_10000474 3300025942 Bacteria 37756
94 Ga0207689_10021769 3300025942 Bacteria 5390
95 Ga0207667_10019690 3300025949 Bacteria 7523
96 Ga0207651_10002747 3300025960 Bacteria 8455
97 Ga0207668_10030949 3300025972 Bacteria 3521
98 Ga0207677_10013037 3300026023 Bacteria 4802
99 Ga0207703_10003975 3300026035 Bacteria 12250
100 Ga0207708_10000382 3300026075 Bacteria 34635
101 Ga0207708_10010099 3300026075 Bacteria 7009
102 Ga0207648_10001543 3300026089 Bacteria 25355
103 Ga0207648_10003015 3300026089 Bacteria 17790
104 Ga0207676_10006031 3300026095 Bacteria 8546
105 Ga0207675_100000178 3300026118 Bacteria 57002
106 Ga0207675_100016390 3300026118 Bacteria 6918
107 Ga0207683_10000746 3300026121 Bacteria 29503
108 Ga0207698_10010646 3300026142 Bacteria 5927
109 Ga0209969_1002608 3300027360 Bacteria 2495
110 Ga0209967_1001042 3300027364 Bacteria 3544
111 Ga0209588_1001508 3300027671 Bacteria 6137
112 Ga0209971_1004035 3300027682 Bacteria 3472
113 Ga0268266_10111590 3300028379 Bacteria 2423
114 Ga0268265_10001934 3300028380 Bacteria 16433
115 Ga0265332_10005402 3300031238 Bacteria 5897
116 Ga0265328_10006950 3300031239 Bacteria 4750
117 Ga0265320_10018041 3300031240 Bacteria 3898
118 Ga0265329_10003958 3300031242 Bacteria 6323
119 Ga0307416_100083432 3300032002 Bacteria 2711
120 Ga0373926_0000087 3300035083 Bacteria 17710
121 Ga0373936_0003309 3300035113 Bacteria 6045
122 Ga0373954_0000210 3300035118 Bacteria 21283
123 Ga0373954_0001228 3300035118 Bacteria 10310
124 Ga0373956_0000260 3300035119 Bacteria 21143
125 Ga0373943_0014351 3300035170 Bacteria 3585
126 Ga0373924_0001885 3300035410 Bacteria 6953
127 Ga0373935_0009920 3300035692 Bacteria 5706
128 Ga0373927_0028071 3300035695 Bacteria 3672
129 Ga0373933_0065345 3300035724 Bacteria 2202
130 Ga0373937_0000487 3300036401 Bacteria 36252
131 Ga0373937_0001073 3300036401 Bacteria 23083
132 Ga0373937_0031047 3300036401 Bacteria 4838
133 Ga0373937_0080455 3300036401 Bacteria 3013
134 Ga0373937_0108162 3300036401 Bacteria 2585
135 Ga0451807_1274732 3300041486 Bacteria 3096
136 Ga0439441_000967 3300042001 Bacteria 3516
137 Ga0439434_0000113 3300042435 Bacteria 21172
138 Ga0439460_0001239 3300042461 Bacteria 6005
139 Ga0495592_0000449 3300046454 Bacteria 30874
140 Ga0495592_0004979 3300046454 Bacteria 9776
141 Ga0495592_0007650 3300046454 Bacteria 8090
142 Ga0495603_0008086 3300046455 Bacteria 6356
143 Ga0495651_0016363 3300046462 Bacteria 5742
144 Ga0495651_0076087 3300046462 Bacteria 2543
145 Ga0495580_0010068 3300046472 Bacteria 7388
146 Ga0495607_0000007 3300046501 Bacteria 272517
147 Ga0495608_0008925 3300046511 Bacteria 7009
148 Ga0495628_0001138 3300046516 Bacteria 24250
149 Ga0495628_0007628 3300046516 Bacteria 9347
150 Ga0495630_0004450 3300046517 Bacteria 9827
151 Ga0495630_0061343 3300046517 Bacteria 2824
152 Ga0495652_0000659 3300046529 Bacteria 40054
153 Ga0495640_0019758 3300046533 Bacteria 4969
154 Ga0495586_0007775 3300046535 Bacteria 5716
155 Ga0495586_0009502 3300046535 Bacteria 5176
156 Ga0495586_0025358 3300046535 Bacteria 3172
157 Ga0495586_0042946 3300046535 Bacteria 2434
158 Ga0495645_0000440 3300046543 Bacteria 28547
159 Ga0495667_0062394 3300046559 Bacteria 2442
160 Ga0495667_0066157 3300046559 Bacteria 2363
161 Ga0495656_0010477 3300046615 Bacteria 3373
162 Ga0495634_0005993 3300046642 Bacteria 9278
163 Ga0495657_0078420 3300046675 Bacteria 2141
164 Ga0495658_0019953 3300046683 Bacteria 3507
165 Ga0495600_0003160 3300046809 Bacteria 9644
166 Ga0495604_0006000 3300047317 Bacteria 9644
167 Ga0495674_0065072 3300047319 Bacteria 3168
168 Ga0495680_0038433 3300047322 Bacteria 3824
169 Ga0495684_0045198 3300047471 Bacteria 3370
170 Ga0496104_0049450 3300048907 Bacteria 3965
171 Ga0496109_0069267 3300048912 Bacteria 3235
172 Ga0496110_0024966 3300048913 Bacteria 5101
173 Ga0496110_0065512 3300048913 Bacteria 3212
174 Ga0501034_0000456 3300049571 Bacteria 67493
175 Ga0501036_0042532 3300049572 Bacteria 3847
176 Ga0501039_0007165 3300049575 Bacteria 8494
177 Ga0501039_0048813 3300049575 Bacteria 3272
178 Ga0501039_0056446 3300049575 Bacteria 3042
179 Ga0501040_0008414 3300049576 Bacteria 6703
180 Ga0501040_0021512 3300049576 Bacteria 4309
181 Ga0501043_0065456 3300049579 Bacteria 2854
182 Ga0501046_0016835 3300049580 Bacteria 6113
183 Ga0501070_0042923 3300049586 Bacteria 3765
184 Ga0501071_0010141 3300049587 Bacteria 6304
185 Ga0501071_0020382 3300049587 Bacteria 4606
186 Ga0501071_0056839 3300049587 Bacteria 2827
187 Ga0501072_0016094 3300049588 Bacteria 5736
188 Ga0501072_0017384 3300049588 Bacteria 5525
189 Ga0501073_0008127 3300049589 Bacteria 7782
190 Ga0501074_0031959 3300049590 Bacteria 3815
191 Ga0501074_0039893 3300049590 Bacteria 3400
192 Ga0501075_0006027 3300049591 Bacteria 8310
193 Ga0501075_0070216 3300049591 Bacteria 2647
194 Ga0501076_0001751 3300049592 Bacteria 14664
195 Ga0501080_0004206 3300049742 Bacteria 12773
196 Ga0501081_0002036 3300049743 Bacteria 12604
197 Ga0501081_0051842 3300049743 Bacteria 2830
198 Ga0501083_0017673 3300049744 Bacteria 4972
199 Ga0501045_0066992 3300049824 Bacteria 2636
200 nmdc:mga05p37_133_c1 3300050507 Bacteria 68369
201 nmdc:mga05p37_229148_c1 3300050507 Bacteria 2239
202 nmdc:mga09592_26_c1 3300050508 Bacteria 84260
203 nmdc:mga09592_6741_c1 3300050508 Bacteria 9344
204 nmdc:mga0qj67_33202_c1 3300050509 Bacteria 4027
205 nmdc:mga0qj67_3547_c1 3300050509 Bacteria 11269
206 nmdc:mga0qj67_4213_c1 3300050509 Bacteria 10417
207 nmdc:mga06r32_1651_c1 3300050510 Bacteria 20142
208 nmdc:mga08x19_18036_c1 3300050514 Bacteria 4324
209 Ga0495601_0019820 3300053077 Bacteria 4106
210 Ga0501084_0028693 3300054114 Bacteria 4653
211 Ga0501084_0054546 3300054114 Bacteria 3344
212 Ga0530510_0000042 3300061734 Bacteria 58436

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050507 nmdc:mga05p37_229148_c1 nmdc:mga05p37_229148_c1_402_2177 539
2 3300028379 Ga0268266_10111590 Ga0268266_101115902 540
3 3300025909 Ga0207705_10060066 Ga0207705_100600661 543
4 3300025899 Ga0207642_10002640 Ga0207642_100026402 561
5 3300035410 Ga0373924_0001885 Ga0373924_0001885_2507_4438 591
6 3300025972 Ga0207668_10030949 Ga0207668_100309492 595
7 3300047317 Ga0495604_0006000 Ga0495604_0006000_7694_9571 602
8 3300005549 Ga0070704_100094924 Ga0070704_1000949241 605
9 3300046675 Ga0495657_0078420 Ga0495657_0078420_166_2073 607
10 3300005331 Ga0070670_100024540 Ga0070670_1000245403 613
11 3300005338 Ga0068868_100011122 Ga0068868_1000111223 613
12 3300005355 Ga0070671_100002688 Ga0070671_10000268810 613
13 3300005364 Ga0070673_100001706 Ga0070673_1000017061 613
14 3300005543 Ga0070672_100001767 Ga0070672_10000176711 613
15 3300005616 Ga0068852_100001889 Ga0068852_1000018895 613
16 3300006237 Ga0097621_100081719 Ga0097621_1000817192 613
17 3300013308 Ga0157375_10010449 Ga0157375_100104495 613
18 3300014745 Ga0157377_10021382 Ga0157377_100213823 613
19 3300025940 Ga0207691_10001095 Ga0207691_1000109512 613
20 3300025920 Ga0207649_10013019 Ga0207649_100130193 614
21 3300025925 Ga0207650_10023704 Ga0207650_100237044 614
22 3300025931 Ga0207644_10009891 Ga0207644_100098913 614
23 3300025960 Ga0207651_10002747 Ga0207651_100027473 614
24 3300026023 Ga0207677_10013037 Ga0207677_100130372 614
25 3300026121 Ga0207683_10000746 Ga0207683_1000074618 614
26 3300048912 Ga0496109_0069267 Ga0496109_0069267_569_2683 614
27 3300048913 Ga0496110_0024966 Ga0496110_0024966_2898_5012 614
28 3300007265 Ga0099794_10001346 Ga0099794_100013468 620
29 3300027671 Ga0209588_1001508 Ga0209588_10015085 620
30 3300013296 Ga0157374_10041214 Ga0157374_100412142 621
31 3300006880 Ga0075429_100010790 Ga0075429_1000107904 631
32 3300009147 Ga0114129_10150999 Ga0114129_101509992 631
33 3300050508 nmdc:mga09592_6741_c1 nmdc:mga09592_6741_c1_6363_8417 631
34 3300035118 Ga0373954_0001228 Ga0373954_0001228_1872_3911 632
35 3300006051 Ga0075364_10000833 Ga0075364_1000083313 640
36 3300050514 nmdc:mga08x19_18036_c1 nmdc:mga08x19_18036_c1_1877_3952 645
37 3300006914 Ga0075436_100071813 Ga0075436_1000718132 647
38 3300006173 Ga0070716_100016149 Ga0070716_1000161492 649
39 3300025939 Ga0207665_10000689 Ga0207665_100006894 649
40 3300035083 Ga0373926_0000087 Ga0373926_0000087_11759_13807 650
41 3300035113 Ga0373936_0003309 Ga0373936_0003309_1475_3523 650
42 3300035170 Ga0373943_0014351 Ga0373943_0014351_241_2289 650
43 3300035692 Ga0373935_0009920 Ga0373935_0009920_1632_3680 650
44 3300035695 Ga0373927_0028071 Ga0373927_0028071_1384_3432 650
45 3300046454 Ga0495592_0000449 Ga0495592_0000449_17528_19600 650
46 3300046455 Ga0495603_0008086 Ga0495603_0008086_2926_4974 650
47 3300046472 Ga0495580_0010068 Ga0495580_0010068_3925_5973 650
48 3300046535 Ga0495586_0007775 Ga0495586_0007775_679_2727 650
49 3300046543 Ga0495645_0000440 Ga0495645_0000440_25161_27233 650
50 3300046683 Ga0495658_0019953 Ga0495658_0019953_564_2612 650
51 3300005353 Ga0070669_100008805 Ga0070669_1000088055 652
52 3300005440 Ga0070705_100025505 Ga0070705_1000255053 652
53 3300005441 Ga0070700_100003564 Ga0070700_1000035646 652
54 3300005458 Ga0070681_10002119 Ga0070681_1000211911 652
55 3300005459 Ga0068867_100003201 Ga0068867_1000032015 652
56 3300005518 Ga0070699_100082789 Ga0070699_1000827891 652
57 3300005530 Ga0070679_100135217 Ga0070679_1001352172 652
58 3300005545 Ga0070695_100000692 Ga0070695_1000006923 652
59 3300005719 Ga0068861_100003457 Ga0068861_1000034574 652
60 3300005844 Ga0068862_100011607 Ga0068862_1000116076 652
61 3300009553 Ga0105249_10086218 Ga0105249_100862182 652
62 3300014326 Ga0157380_10050136 Ga0157380_100501362 652
63 3300025912 Ga0207707_10006438 Ga0207707_100064385 652
64 3300025923 Ga0207681_10008569 Ga0207681_100085693 652
65 3300026075 Ga0207708_10010099 Ga0207708_100100994 652
66 3300026089 Ga0207648_10003015 Ga0207648_1000301517 652
67 3300026118 Ga0207675_100016390 Ga0207675_1000163905 652
68 3300028380 Ga0268265_10001934 Ga0268265_1000193419 652
69 3300049572 Ga0501036_0042532 Ga0501036_0042532_1504_3513 652
70 3300049576 Ga0501040_0021512 Ga0501040_0021512_1004_3013 652
71 3300042435 Ga0439434_0000113 Ga0439434_0000113_4083_6101 653
72 3300025942 Ga0207689_10021769 Ga0207689_100217696 654
73 3300049575 Ga0501039_0007165 Ga0501039_0007165_5795_7849 654
74 3300049575 Ga0501039_0056446 Ga0501039_0056446_552_2528 654
75 3300049576 Ga0501040_0008414 Ga0501040_0008414_3349_5403 654
76 3300049580 Ga0501046_0016835 Ga0501046_0016835_3466_5520 654
77 3300049587 Ga0501071_0010141 Ga0501071_0010141_2610_4664 654
78 3300049588 Ga0501072_0017384 Ga0501072_0017384_2651_4705 654
79 3300049591 Ga0501075_0006027 Ga0501075_0006027_594_2648 654
80 3300049591 Ga0501075_0070216 Ga0501075_0070216_115_2124 654
81 3300049592 Ga0501076_0001751 Ga0501076_0001751_3376_5430 654
82 3300049743 Ga0501081_0002036 Ga0501081_0002036_9535_11589 654
83 3300049824 Ga0501045_0066992 Ga0501045_0066992_87_2141 654
84 3300054114 Ga0501084_0054546 Ga0501084_0054546_839_2893 654
85 3300061734 Ga0530510_0000042 Ga0530510_0000042_2651_4705 654
86 3300035119 Ga0373956_0000260 Ga0373956_0000260_2163_4256 656
87 3300036401 Ga0373937_0000487 Ga0373937_0000487_30399_32492 656
88 3300036401 Ga0373937_0031047 Ga0373937_0031047_2254_4296 656
89 3300046454 Ga0495592_0007650 Ga0495592_0007650_253_2295 656
90 3300046462 Ga0495651_0076087 Ga0495651_0076087_69_2162 656
91 3300046511 Ga0495608_0008925 Ga0495608_0008925_4690_6732 656
92 3300046517 Ga0495630_0061343 Ga0495630_0061343_273_2315 656
93 3300046535 Ga0495586_0009502 Ga0495586_0009502_2658_4700 656
94 3300046642 Ga0495634_0005993 Ga0495634_0005993_6757_8799 656
95 3300005549 Ga0070704_100000303 Ga0070704_1000003034 658
96 3300006880 Ga0075429_100000015 Ga0075429_10000001556 658
97 3300009147 Ga0114129_10013321 Ga0114129_100133214 658
98 3300050507 nmdc:mga05p37_133_c1 nmdc:mga05p37_133_c1_38199_40253 658
99 3300050508 nmdc:mga09592_26_c1 nmdc:mga09592_26_c1_16168_18222 658
100 3300050510 nmdc:mga06r32_1651_c1 nmdc:mga06r32_1651_c1_12155_14209 658
101 3300026035 Ga0207703_10003975 Ga0207703_1000397510 659
102 3300031238 Ga0265332_10005402 Ga0265332_100054025 660
103 3300031239 Ga0265328_10006950 Ga0265328_100069503 660
104 3300031240 Ga0265320_10018041 Ga0265320_100180413 660
105 3300031242 Ga0265329_10003958 Ga0265329_100039583 660
106 3300046516 Ga0495628_0001138 Ga0495628_0001138_15549_17621 661
107 3300046529 Ga0495652_0000659 Ga0495652_0000659_3280_5352 661
108 3300036401 Ga0373937_0080455 Ga0373937_0080455_38_2146 662
109 3300046462 Ga0495651_0016363 Ga0495651_0016363_3236_5344 662
110 3300046501 Ga0495607_0000007 Ga0495607_0000007_86330_88477 662
111 iso_pu_bacteria 2857576091 2857581180 662
112 3300035724 Ga0373933_0065345 Ga0373933_0065345_66_2171 663
113 3300036401 Ga0373937_0108162 Ga0373937_0108162_54_2159 663
114 3300046454 Ga0495592_0004979 Ga0495592_0004979_1919_4024 663
115 3300046516 Ga0495628_0007628 Ga0495628_0007628_5623_7728 663
116 3300046535 Ga0495586_0025358 Ga0495586_0025358_72_2177 663
117 3300046559 Ga0495667_0066157 Ga0495667_0066157_216_2321 663
118 3300046615 Ga0495656_0010477 Ga0495656_0010477_1221_3224 663
119 3300049587 Ga0501071_0056839 Ga0501071_0056839_343_2346 663
120 3300049743 Ga0501081_0051842 Ga0501081_0051842_650_2731 663
121 3300053077 Ga0495601_0019820 Ga0495601_0019820_1609_3714 663
122 3300054114 Ga0501084_0028693 Ga0501084_0028693_2112_4115 663
123 3300005340 Ga0070689_100000383 Ga0070689_10000038321 664
124 3300005438 Ga0070701_10007230 Ga0070701_100072303 664
125 3300005440 Ga0070705_100014965 Ga0070705_1000149653 664
126 3300005441 Ga0070700_100000746 Ga0070700_1000007467 664
127 3300005459 Ga0068867_100012966 Ga0068867_1000129662 664
128 3300005544 Ga0070686_100000740 Ga0070686_10000074010 664
129 3300005546 Ga0070696_100022306 Ga0070696_1000223064 664
130 3300005615 Ga0070702_100003111 Ga0070702_1000031116 664
131 3300005617 Ga0068859_100004756 Ga0068859_1000047565 664
132 3300005718 Ga0068866_10002120 Ga0068866_100021204 664
133 3300005719 Ga0068861_100002984 Ga0068861_10000298410 664
134 3300005842 Ga0068858_100002485 Ga0068858_1000024857 664
135 3300006237 Ga0097621_100002878 Ga0097621_1000028785 664
136 3300006931 Ga0097620_100004756 Ga0097620_1000047565 664
137 3300009148 Ga0105243_10004473 Ga0105243_1000447312 664
138 3300009553 Ga0105249_10036317 Ga0105249_100363173 664
139 3300013297 Ga0157378_10001155 Ga0157378_100011557 664
140 3300025908 Ga0207643_10004018 Ga0207643_100040188 664
141 3300025942 Ga0207689_10000474 Ga0207689_1000047419 664
142 3300026075 Ga0207708_10000382 Ga0207708_1000038217 664
143 3300026089 Ga0207648_10001543 Ga0207648_1000154318 664
144 3300026118 Ga0207675_100000178 Ga0207675_10000017819 664
145 3300035118 Ga0373954_0000210 Ga0373954_0000210_9736_11808 664
146 3300036401 Ga0373937_0001073 Ga0373937_0001073_16428_18500 664
147 3300046517 Ga0495630_0004450 Ga0495630_0004450_7470_9581 664
148 3300046533 Ga0495640_0019758 Ga0495640_0019758_252_2363 664
149 3300046535 Ga0495586_0042946 Ga0495586_0042946_72_2183 664
150 3300046559 Ga0495667_0062394 Ga0495667_0062394_244_2355 664
151 3300046809 Ga0495600_0003160 Ga0495600_0003160_2264_4375 664
152 3300047319 Ga0495674_0065072 Ga0495674_0065072_855_2966 664
153 3300047322 Ga0495680_0038433 Ga0495680_0038433_233_2344 664
154 3300047471 Ga0495684_0045198 Ga0495684_0045198_1011_3122 664
155 3300049571 Ga0501034_0000456 Ga0501034_0000456_5533_7686 664
156 3300049579 Ga0501043_0065456 Ga0501043_0065456_636_2786 664
157 3300049586 Ga0501070_0042923 Ga0501070_0042923_1082_3232 664
158 3300049588 Ga0501072_0016094 Ga0501072_0016094_1863_4016 664
159 3300049589 Ga0501073_0008127 Ga0501073_0008127_4666_6816 664
160 3300049590 Ga0501074_0031959 Ga0501074_0031959_990_3140 664
161 3300049744 Ga0501083_0017673 Ga0501083_0017673_1082_3232 664
162 3300005331 Ga0070670_100078822 Ga0070670_1000788222 665
163 3300005367 Ga0070667_100058823 Ga0070667_1000588233 665
164 3300005615 Ga0070702_100024588 Ga0070702_1000245882 665
165 3300005841 Ga0068863_100125714 Ga0068863_1001257142 665
166 3300009148 Ga0105243_10019638 Ga0105243_100196386 665
167 3300017792 Ga0163161_10056973 Ga0163161_100569732 665
168 3300025893 Ga0207682_10000844 Ga0207682_1000084410 665
169 3300025908 Ga0207643_10012957 Ga0207643_100129572 665
170 3300025918 Ga0207662_10002421 Ga0207662_100024213 665
171 3300025925 Ga0207650_10028284 Ga0207650_100282842 665
172 3300026095 Ga0207676_10006031 Ga0207676_100060312 665
173 3300027360 Ga0209969_1002608 Ga0209969_10026081 665
174 3300006846 Ga0075430_100015290 Ga0075430_1000152903 666
175 3300006852 Ga0075433_10027143 Ga0075433_100271433 666
176 3300007076 Ga0075435_100000811 Ga0075435_10000081116 666
177 3300049575 Ga0501039_0048813 Ga0501039_0048813_448_2520 666
178 3300049587 Ga0501071_0020382 Ga0501071_0020382_1040_3112 666
179 3300049590 Ga0501074_0039893 Ga0501074_0039893_634_2706 666
180 3300049742 Ga0501080_0004206 Ga0501080_0004206_4756_6828 666
181 3300050509 nmdc:mga0qj67_3547_c1 nmdc:mga0qj67_3547_c1_3620_5692 666
182 3300006846 Ga0075430_100000168 Ga0075430_10000016842 667
183 3300006847 Ga0075431_100044508 Ga0075431_1000445083 667
184 3300025940 Ga0207691_10062504 Ga0207691_100625043 667
185 3300050509 nmdc:mga0qj67_4213_c1 nmdc:mga0qj67_4213_c1_1082_3094 667
186 3300005456 Ga0070678_100061915 Ga0070678_1000619152 668
187 3300005616 Ga0068852_100020421 Ga0068852_1000204212 668
188 3300005834 Ga0068851_10003710 Ga0068851_100037102 668
189 3300006358 Ga0068871_100052804 Ga0068871_1000528041 668
190 3300025321 Ga0207656_10000780 Ga0207656_100007802 668
191 3300025909 Ga0207705_10021010 Ga0207705_100210103 668
192 3300026142 Ga0207698_10010646 Ga0207698_100106467 668
193 3300027364 Ga0209967_1001042 Ga0209967_10010423 668
194 3300032002 Ga0307416_100083432 Ga0307416_1000834321 668
195 3300048907 Ga0496104_0049450 Ga0496104_0049450_658_2799 668
196 3300048913 Ga0496110_0065512 Ga0496110_0065512_709_2850 668
197 3300050509 nmdc:mga0qj67_33202_c1 nmdc:mga0qj67_33202_c1_1383_3452 668
198 3300005459 Ga0068867_100054175 Ga0068867_1000541752 669
199 3300005563 Ga0068855_100028597 Ga0068855_1000285974 669
200 3300009093 Ga0105240_10042328 Ga0105240_100423284 669
201 3300009094 Ga0111539_10072184 Ga0111539_100721842 669
202 3300009174 Ga0105241_10013590 Ga0105241_100135907 669
203 3300013297 Ga0157378_10011184 Ga0157378_100111847 669
204 3300013307 Ga0157372_10116621 Ga0157372_101166212 669
205 3300025913 Ga0207695_10030603 Ga0207695_100306034 669
206 3300025924 Ga0207694_10098278 Ga0207694_100982782 669
207 3300025938 Ga0207704_10015507 Ga0207704_100155073 669
208 3300025949 Ga0207667_10019690 Ga0207667_100196908 669
209 3300027682 Ga0209971_1004035 Ga0209971_10040352 669
210 3300041486 Ga0451807_1274732 Ga0451807_1274732_364_2409 669
211 3300042001 Ga0439441_000967 Ga0439441_000967_612_2666 669
212 3300042461 Ga0439460_0001239 Ga0439460_0001239_1990_4044 669
213 3300005330 Ga0070690_100003958 Ga0070690_1000039586 670

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02092

tRNA_synt_2f

Glycyl-tRNA synthetase beta subunit

5

581

0.94

PF05746

DALR_1

DALR anticodon binding domain

608

713

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7eiv-assembly1.cif.gz_D heterotetrameric glycyl-trna synthetase from escherichia coli 0.889 2 545
7yse-assembly1.cif.gz_C crystal structure of e. coli heterotetrameric glyrs in complex with trna 0.8792 2 667
8h1c-assembly1.cif.gz_B cryo-em structure of oryza sativa plastid glycyl-trna synthetase in complex with two trnas (one in trna binding state and the other in trna locked state) 0.8766 2 668
7yse-assembly1.cif.gz_D crystal structure of e. coli heterotetrameric glyrs in complex with trna 0.8729 1 666
7yse-assembly1.cif.gz_C crystal structure of e. coli heterotetrameric glyrs in complex with trna 0.8728 2 667
ID Description Score Start End Superfamily
af_P00961_579_685_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9638 558 664 1.10.730.10
af_P00961_579_685_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9376 558 664 1.10.730.10
af_Q2FZ08_320_474_1.10.3210.10 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.835 340 454 1.10.3210.10
af_Q8L785_931_1067_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.8233 537 666 1.10.730.10
af_Q57689_448_566_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.7781 558 661 1.10.730.10
ID Description Score Start End GO Terms
AF-W1X862-F1-model_v4 Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) 0.9803 331 467 GO:0004820
GO:0005524
GO:0005829
GO:0006426
AF-X0Y1M5-F1-model_v4 glycine--tRNA ligase (EC 6.1.1.14) 0.9801 180 306 GO:0004820
GO:0005524
GO:0005829
GO:0006426
AF-A0A435GKL7-F1-model_v4 glycine--tRNA ligase (EC 6.1.1.14) 0.979 346 492 GO:0004820
GO:0005524
GO:0005829
GO:0006426
AF-A0A431HWL1-F1-model_v4 Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) 0.9784 503 670 GO:0004814
GO:0004820
GO:0005524
GO:0005829
GO:0006420
GO:0006426
AF-A0A7C7UHR7-F1-model_v4 Glycine--tRNA ligase beta subunit (EC 6.1.1.14) (Glycyl-tRNA synthetase beta subunit) 0.975 152 670 GO:0004814
GO:0004820
GO:0005524
GO:0005829
GO:0006420
GO:0006426

Feature Viewer

pLDDT pTM Quality
92.17 0.78 High
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Predicted Structure (AlphaFold2)

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