F323253

General Info

Members Datasets Scaffolds Average Seq Length
212 131 198 287

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0000374|Ga0495625_0000374_46208_47155
Length 315
Sequence MQKITLTIVAVILGIGSLTTGNIDHQLQRSITIDSLGACQGISYQNGRIFLYGDRETGMIREFKMEGDSLVYQHKEIKLTKNGQDVINHPTGIAYNGVAPTFIGNSIRLNAEGTKWRAVIYCVDWKALLSTGTLDASLLNTIDDDACIQGTRPEYVKYNNKWYVATADYGDHGNEVRLYDPQKLAKAANTKEAGVLYKKFTCTPWVQNLHWIADKGVLVLIQNKIEGRQWRFTYVDLKKSIEAGKQVVISQVDDINRADELEGFSFIGNDDRGIAVTSSPKGNVNKLVKTGEMCQLTGAGVHPVAFFINTNLTFK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2738541302 Pedobacter sp. CF074 Isolate Unclassified
5 2818991437 Pedobacter terrae 518 Isolate Unclassified
6 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
7 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
8 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
9 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
10 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
11 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
12 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
13 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
14 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
15 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
16 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
17 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
18 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
19 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
20 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
21 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
22 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
23 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
24 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
25 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
26 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
27 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
28 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
29 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
30 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
31 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
54 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
55 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
59 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
60 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
61 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
63 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
78 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
82 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
83 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
84 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
85 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
88 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
89 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
94 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
95 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
96 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
97 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
98 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
99 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
100 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
101 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
102 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
103 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
104 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
105 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
106 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
107 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
108 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
109 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
110 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
111 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
114 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
118 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
119 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
120 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
121 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
122 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
123 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
124 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
125 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
126 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
127 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
128 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
129 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
130 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
131 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.4
Metatranscriptomes 0
Isolates 6.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.04
Nodule 0
Rhizoplane 0.47
Rhizosphere 68.87
Stem 0
Stem Tuber 0
Unclassified 14.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3070855 2162886007 Bacteria 29472
2 JGI24740J21852_10003618 3300001979 Bacteria 6748
3 JGI24740J21852_10024788 3300001979 Bacteria 2030
4 JGI24739J22299_10006411 3300001989 Bacteria 4443
5 JGI24737J22298_10000138 3300001990 Bacteria 22343
6 JGI24737J22298_10036358 3300001990 Unclassified 1521
7 JGI24735J21928_10000008 3300002067 Bacteria 319819
8 JGI25162J39368_1000062 3300002737 Bacteria 135587
9 JGI25162J39368_1001399 3300002737 Bacteria 13182
10 JGI25154J39366_1000078 3300002738 Bacteria 90241
11 JGI25165J46597_1000741 3300003214 Bacteria 25362
12 rootH1_10067389 3300003316 Bacteria 6430
13 rootH1_10171430 3300003316 Unclassified 1125
14 rootH2_10001521 3300003320 Bacteria 67147
15 rootH2_10008160 3300003320 Bacteria 36645
16 rootH2_10013300 3300003320 Bacteria 29603
17 rootH2_10298286 3300003320 Unclassified 1496
18 rootH1_10000459 3300003323 Bacteria 37280
19 rootH1_10024225 3300003323 Bacteria 1583
20 rootH1_10103076 3300003323 Bacteria 12549
21 rootH1_10157530 3300003323 Bacteria 4748
22 JGI25160J50197_1001449 3300003354 Bacteria 11859
23 Ga0055536_1000038 3300003781 Bacteria 133102
24 Ga0055530_10000250 3300003791 Bacteria 48786
25 Ga0065714_10002907 3300005288 Bacteria 20587
26 Ga0065714_10070780 3300005288 Bacteria 3766
27 Ga0065714_10092763 3300005288 Bacteria 1852
28 Ga0065714_10187646 3300005288 Bacteria 939
29 Ga0065704_10000258 3300005289 Bacteria 102292
30 Ga0070658_10022844 3300005327 Bacteria 5020
31 Ga0070666_10006946 3300005335 Bacteria 6976
32 Ga0068853_100006301 3300005539 Bacteria 9415
33 Ga0068853_100080941 3300005539 Bacteria 2843
34 Ga0070693_100303683 3300005547 Unclassified 1077
35 Ga0070665_100000006 3300005548 Bacteria 718034
36 Ga0068860_100000005 3300005843 Bacteria 472349
37 Ga0081540_1049898 3300005983 Bacteria 2083
38 Ga0075366_10003608 3300006195 Bacteria 8198
39 Ga0075366_10003641 3300006195 Bacteria 8167
40 Ga0105244_10078937 3300009036 Bacteria 1632
41 Ga0105240_10000061 3300009093 Bacteria 218897
42 Ga0105240_10000087 3300009093 Bacteria 187637
43 Ga0105240_10001644 3300009093 Bacteria 37960
44 Ga0105240_10011276 3300009093 Bacteria 12460
45 Ga0105241_10156414 3300009174 Bacteria 1870
46 Ga0105241_10197296 3300009174 Bacteria 1679
47 Ga0105242_10143449 3300009176 Bacteria 2075
48 Ga0105237_10009452 3300009545 Bacteria 10441
49 Ga0105237_10030165 3300009545 Bacteria 5510
50 Ga0105237_10052025 3300009545 Bacteria 4113
51 Ga0105237_10244786 3300009545 Bacteria 1795
52 Ga0105237_10345704 3300009545 Bacteria 1492
53 Ga0105237_10350203 3300009545 Bacteria 1481
54 Ga0105238_10093510 3300009551 Bacteria 2995
55 Ga0105239_10000004 3300010375 Bacteria 532483
56 Ga0105239_10001901 3300010375 Viruses 27265
57 Ga0105239_10016170 3300010375 Viruses 8255
58 Ga0105239_10044321 3300010375 Bacteria 4877
59 Ga0105239_10065421 3300010375 Bacteria 3993
60 Ga0157373_10000123 3300013100 Bacteria 59777
61 Ga0157373_10005043 3300013100 Bacteria 9918
62 Ga0157373_10048107 3300013100 Bacteria 3041
63 Ga0157371_10000657 3300013102 Bacteria 40996
64 Ga0157371_10006559 3300013102 Bacteria 9568
65 Ga0157370_10004535 3300013104 Bacteria 15907
66 Ga0157370_10086021 3300013104 Bacteria 2954
67 Ga0157370_10192793 3300013104 Bacteria 1892
68 Ga0157369_10000007 3300013105 Bacteria 402562
69 Ga0157369_10257645 3300013105 Bacteria 1820
70 Ga0157374_10151153 3300013296 Bacteria 2257
71 Ga0163162_10000035 3300013306 Bacteria 147102
72 Ga0163162_10000274 3300013306 Bacteria 47010
73 Ga0163162_10013274 3300013306 Bacteria 8047
74 Ga0163162_10415753 3300013306 Bacteria 1477
75 Ga0157372_10000648 3300013307 Bacteria 38170
76 Ga0157372_10000873 3300013307 Bacteria 32729
77 Ga0157372_10013887 3300013307 Bacteria 8604
78 Ga0157372_10157732 3300013307 Unclassified 2621
79 Ga0163163_10161132 3300014325 Bacteria 2289
80 Ga0182008_10044521 3300014497 Bacteria 2207
81 Ga0182008_10105037 3300014497 Bacteria 1397
82 Ga0182006_1000220 3300015261 Bacteria 55777
83 Ga0182006_1000233 3300015261 Bacteria 52709
84 Ga0182006_1002077 3300015261 Bacteria 11198
85 Ga0182007_10000007 3300015262 Bacteria 376596
86 Ga0163161_10000130 3300017792 Bacteria 70533
87 Ga0163161_10000518 3300017792 Bacteria 31450
88 Ga0163161_10004104 3300017792 Bacteria 10190
89 Ga0163161_10010086 3300017792 Viruses 6538
90 Ga0163161_10178815 3300017792 Bacteria 1626
91 Ga0207427_100110 3300025231 Bacteria 113735
92 Ga0209437_100093 3300025233 Bacteria 239733
93 Ga0209437_100177 3300025233 Bacteria 135759
94 Ga0209646_1000004 3300025246 Bacteria 786587
95 Ga0209026_1000136 3300025250 Bacteria 116507
96 Ga0209148_1023302 3300025254 Unclassified 987
97 Ga0209233_1000089 3300025261 Bacteria 316381
98 Ga0209233_1000758 3300025261 Bacteria 14596
99 Ga0209676_1000201 3300025292 Bacteria 133195
100 Ga0209758_1026431 3300025297 Bacteria 2511
101 Ga0209050_1000203 3300025298 Bacteria 133156
102 Ga0207426_1000002 3300025302 Bacteria 1249660
103 Ga0207426_1000367 3300025302 Bacteria 80232
104 Ga0207680_10030951 3300025903 Unclassified 3026
105 Ga0207647_10076367 3300025904 Bacteria 2015
106 Ga0207654_10221892 3300025911 Bacteria 1254
107 Ga0207695_10000057 3300025913 Bacteria 376090
108 Ga0207695_10000068 3300025913 Bacteria 324859
109 Ga0207695_10001273 3300025913 Bacteria 42881
110 Ga0207695_10025912 3300025913 Bacteria 6554
111 Ga0207695_10057437 3300025913 Bacteria 4042
112 Ga0207671_10005528 3300025914 Bacteria 11618
113 Ga0207671_10048568 3300025914 Bacteria 3141
114 Ga0207671_10216530 3300025914 Bacteria 1499
115 Ga0207671_10257722 3300025914 Unclassified 1372
116 Ga0207667_10245449 3300025949 Bacteria 1832
117 Ga0207640_10064067 3300025981 Viruses 2446
118 Ga0207639_10077464 3300026041 Bacteria 2621
119 Ga0268266_10000010 3300028379 Bacteria 1030233
120 Ga0268264_10000012 3300028381 Bacteria 521740
121 Ga0307517_10005170 3300028786 Bacteria 19797
122 Ga0307517_10068171 3300028786 Bacteria 3245
123 Ga0307517_10101914 3300028786 Bacteria 2255
124 Ga0307515_10001368 3300028794 Bacteria 55146
125 Ga0307515_10001915 3300028794 Bacteria 46153
126 Ga0265327_10000212 3300031251 Bacteria 121556
127 Ga0307513_10154414 3300031456 Bacteria 2198
128 Ga0307509_10136271 3300031507 Bacteria 2399
129 Ga0307405_10000044 3300031731 Bacteria 77117
130 Ga0307407_10000025 3300031903 Bacteria 112811
131 Ga0307412_10000026 3300031911 Bacteria 228930
132 Ga0307409_100159177 3300031995 Bacteria 1972
133 Ga0307416_100000068 3300032002 Bacteria 86974
134 Ga0307414_10000708 3300032004 Bacteria 17002
135 Ga0307414_10014668 3300032004 Bacteria 4707
136 Ga0307510_10015380 3300033180 Bacteria 9046
137 Ga0439465_0090996 3300041413 Bacteria 1044
138 Ga0466970_0136808 3300044765 Unclassified 1348
139 Ga0466957_0105201 3300044842 Bacteria 1783
140 Ga0495638_0062652 3300046460 Bacteria 2295
141 Ga0495638_0105339 3300046460 Bacteria 1681
142 Ga0495651_0185843 3300046462 Bacteria 1467
143 Ga0495650_0000036 3300046471 Bacteria 400633
144 Ga0495585_0000173 3300046492 Bacteria 69500
145 Ga0495585_0003037 3300046492 Bacteria 11563
146 Ga0495585_0153319 3300046492 Bacteria 1200
147 Ga0495606_0000008 3300046507 Bacteria 321373
148 Ga0495606_0008101 3300046507 Bacteria 9215
149 Ga0495610_0000503 3300046512 Bacteria 39937
150 Ga0495610_0000976 3300046512 Bacteria 26427
151 Ga0495610_0031692 3300046512 Bacteria 2755
152 Ga0495616_0004145 3300046513 Bacteria 9188
153 Ga0495637_0070774 3300046520 Bacteria 1408
154 Ga0495648_0000462 3300046524 Bacteria 43702
155 Ga0495609_0005195 3300046538 Bacteria 6930
156 Ga0495633_0000029 3300046558 Bacteria 200381
157 Ga0495633_0010743 3300046558 Bacteria 4980
158 Ga0495668_0000010 3300046616 Bacteria 487308
159 Ga0495668_0006174 3300046616 Bacteria 7928
160 Ga0495611_0000172 3300046648 Bacteria 46918
161 Ga0495611_0038382 3300046648 Bacteria 2130
162 Ga0495625_0000017 3300046660 Bacteria 299728
163 Ga0495625_0000374 3300046660 Bacteria 68566
164 Ga0495625_0000678 3300046660 Bacteria 48438
165 Ga0495661_0001366 3300046665 Bacteria 20602
166 Ga0495661_0003637 3300046665 Bacteria 11341
167 Ga0495661_0004879 3300046665 Bacteria 9604
168 Ga0495658_0070342 3300046683 Bacteria 2030
169 Ga0495671_0041927 3300046692 Bacteria 2303
170 Ga0495649_0000121 3300046694 Bacteria 68443
171 Ga0495649_0053912 3300046694 Bacteria 2176
172 Ga0495660_0117236 3300046810 Bacteria 1351
173 Ga0495687_000009 3300047443 Bacteria 419317
174 Ga0495686_0000078 3300047472 Bacteria 203927
175 Ga0495686_0002440 3300047472 Bacteria 17557
176 Ga0495686_0082876 3300047472 Unclassified 1957
177 Ga0496126_0003532 3300048929 Bacteria 19661
178 Ga0495682_0057868 3300049460 Bacteria 1403
179 Ga0501033_0340175 3300049570 Bacteria 1052
180 Ga0501047_0005154 3300049581 Bacteria 12263
181 Ga0501225_0000154 3300049705 Bacteria 21140
182 Ga0501044_0213371 3300049823 Bacteria 1884
183 Ga0501044_0481071 3300049823 Bacteria 1145
184 nmdc:mga0k408_1321_c2 3300050493 Bacteria 8098
185 nmdc:mga0k408_20643_c1 3300050493 Bacteria 3693
186 Ga0500578_0000042 3300053086 Bacteria 129410
187 Ga0500578_0027268 3300053086 Bacteria 3667
188 Ga0500646_0097950 3300053090 Bacteria 917
189 Ga0500647_0026612 3300053091 Bacteria 2729
190 Ga0500618_000011 3300053125 Bacteria 198091
191 Ga0500652_014153 3300053131 Bacteria 2845
192 Ga0500568_0074721 3300053139 Bacteria 1293
193 Ga0500588_0010260 3300053146 Unclassified 2256
194 Ga0500604_0006038 3300053151 Unclassified 3197
195 Ga0500616_0090035 3300053153 Bacteria 1522
196 Ga0500622_0000358 3300053156 Bacteria 44392
197 Ga0500622_0021825 3300053156 Bacteria 3397
198 Ga0500636_0045301 3300053177 Bacteria 2595

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300017792 Ga0163161_10010086 Ga0163161_100100862 252
2 3300003320 rootH2_10001521 rootH2_1000152117 255
3 3300002737 JGI25162J39368_1000062 JGI25162J39368_100006254 256
4 3300010375 Ga0105239_10001901 Ga0105239_1000190115 256
5 3300025233 Ga0209437_100177 Ga0209437_10017753 256
6 3300025913 Ga0207695_10025912 Ga0207695_100259123 256
7 3300026041 Ga0207639_10077464 Ga0207639_100774643 256
8 3300049581 Ga0501047_0005154 Ga0501047_0005154_1437_2312 257
9 3300010375 Ga0105239_10016170 Ga0105239_100161702 258
10 3300025981 Ga0207640_10064067 Ga0207640_100640671 258
11 3300046810 Ga0495660_0117236 Ga0495660_0117236_140_946 263
12 3300009093 Ga0105240_10000087 Ga0105240_1000008788 266
13 3300009545 Ga0105237_10052025 Ga0105237_100520253 266
14 3300009545 Ga0105237_10345704 Ga0105237_103457042 266
15 3300025254 Ga0209148_1023302 Ga0209148_10233021 266
16 3300025913 Ga0207695_10000057 Ga0207695_10000057199 266
17 3300025913 Ga0207695_10000068 Ga0207695_10000068209 266
18 3300025913 Ga0207695_10057437 Ga0207695_100574373 266
19 3300025914 Ga0207671_10257722 Ga0207671_102577222 266
20 3300049823 Ga0501044_0213371 Ga0501044_0213371_949_1752 266
21 3300053090 Ga0500646_0097950 Ga0500646_0097950_103_906 266
22 3300053139 Ga0500568_0074721 Ga0500568_0074721_11_811 266
23 3300013296 Ga0157374_10151153 Ga0157374_101511532 268
24 3300046462 Ga0495651_0185843 Ga0495651_0185843_35_847 269
25 3300047472 Ga0495686_0082876 Ga0495686_0082876_152_1030 272
26 3300003320 rootH2_10008160 rootH2_1000816020 275
27 3300013104 Ga0157370_10192793 Ga0157370_101927932 277
28 3300005539 Ga0068853_100006301 Ga0068853_1000063016 278
29 3300009551 Ga0105238_10093510 Ga0105238_100935103 278
30 3300005288 Ga0065714_10187646 Ga0065714_101876461 279
31 3300017792 Ga0163161_10000130 Ga0163161_1000013057 279
32 3300001989 JGI24739J22299_10006411 JGI24739J22299_100064112 281
33 3300001990 JGI24737J22298_10000138 JGI24737J22298_100001387 281
34 3300002067 JGI24735J21928_10000008 JGI24735J21928_10000008128 281
35 3300014497 Ga0182008_10044521 Ga0182008_100445211 281
36 3300014497 Ga0182008_10105037 Ga0182008_101050372 281
37 3300009176 Ga0105242_10143449 Ga0105242_101434492 282
38 iso_pu_bacteria 2977232053 2977234984 283
39 3300002737 JGI25162J39368_1001399 JGI25162J39368_10013999 284
40 3300003214 JGI25165J46597_1000741 JGI25165J46597_100074110 284
41 3300025231 Ga0207427_100110 Ga0207427_10011035 284
42 3300025233 Ga0209437_100093 Ga0209437_100093178 284
43 3300025261 Ga0209233_1000089 Ga0209233_1000089157 284
44 iso_pu_bacteria 2599185184 2599476604 284
45 iso_pu_bacteria 2928078545 2928078552 284
46 iso_pu_bacteria 2928147474 2928151770 284
47 iso_pu_bacteria 2929921140 2929921696 285
48 iso_pu_bacteria 8003151029 8003157227 285
49 iso_pu_bacteria 2852623160 2852624470 286
50 iso_pu_bacteria 2884933994 2884936662 286
51 3300003320 rootH2_10298286 rootH2_102982861 287
52 3300003323 rootH1_10000459 rootH1_1000045915 287
53 3300003323 rootH1_10103076 rootH1_101030769 287
54 3300009093 Ga0105240_10001644 Ga0105240_1000164415 287
55 3300009545 Ga0105237_10009452 Ga0105237_100094526 287
56 3300010375 Ga0105239_10000004 Ga0105239_10000004257 287
57 3300025913 Ga0207695_10001273 Ga0207695_1000127315 287
58 3300025914 Ga0207671_10005528 Ga0207671_100055287 287
59 3300031456 Ga0307513_10154414 Ga0307513_101544142 287
60 3300046616 Ga0495668_0006174 Ga0495668_0006174_4201_5073 287
61 3300046665 Ga0495661_0001366 Ga0495661_0001366_2911_3786 287
62 3300049460 Ga0495682_0057868 Ga0495682_0057868_243_1121 287
63 3300053151 Ga0500604_0006038 Ga0500604_0006038_153_1025 287
64 iso_pu_bacteria 2585427687 2586210603 287
65 iso_pu_bacteria 2738541302 2738856413 287
66 iso_pu_bacteria 2818991437 2819546845 287
67 iso_pu_bacteria 2842722452 2842725555 287
68 iso_pu_bacteria 2842909656 2842914699 287
69 iso_pu_bacteria 2954016120 2954019419 287
70 3300001979 JGI24740J21852_10024788 JGI24740J21852_100247882 288
71 3300001990 JGI24737J22298_10036358 JGI24737J22298_100363582 288
72 3300003316 rootH1_10067389 rootH1_100673892 288
73 3300003320 rootH2_10013300 rootH2_1001330013 288
74 3300003323 rootH1_10024225 rootH1_100242252 288
75 3300005327 Ga0070658_10022844 Ga0070658_100228442 288
76 3300005335 Ga0070666_10006946 Ga0070666_100069463 288
77 3300005539 Ga0068853_100080941 Ga0068853_1000809412 288
78 3300005547 Ga0070693_100303683 Ga0070693_1003036832 288
79 3300005548 Ga0070665_100000006 Ga0070665_100000006331 288
80 3300005843 Ga0068860_100000005 Ga0068860_100000005268 288
81 3300005983 Ga0081540_1049898 Ga0081540_10498982 288
82 3300006195 Ga0075366_10003608 Ga0075366_100036081 288
83 3300006195 Ga0075366_10003641 Ga0075366_100036415 288
84 3300009093 Ga0105240_10000061 Ga0105240_1000006195 288
85 3300009093 Ga0105240_10011276 Ga0105240_100112768 288
86 3300009174 Ga0105241_10156414 Ga0105241_101564142 288
87 3300009174 Ga0105241_10197296 Ga0105241_101972961 288
88 3300009545 Ga0105237_10244786 Ga0105237_102447862 288
89 3300009545 Ga0105237_10350203 Ga0105237_103502031 288
90 3300010375 Ga0105239_10065421 Ga0105239_100654212 288
91 3300013100 Ga0157373_10005043 Ga0157373_100050435 288
92 3300013102 Ga0157371_10000657 Ga0157371_1000065724 288
93 3300013105 Ga0157369_10257645 Ga0157369_102576452 288
94 3300013306 Ga0163162_10000274 Ga0163162_1000027412 288
95 3300013306 Ga0163162_10013274 Ga0163162_100132742 288
96 3300013306 Ga0163162_10415753 Ga0163162_104157531 288
97 3300013307 Ga0157372_10000648 Ga0157372_1000064814 288
98 3300013307 Ga0157372_10000873 Ga0157372_1000087324 288
99 3300013307 Ga0157372_10013887 Ga0157372_100138877 288
100 3300014325 Ga0163163_10161132 Ga0163163_101611323 288
101 3300025261 Ga0209233_1000758 Ga0209233_10007582 288
102 3300025903 Ga0207680_10030951 Ga0207680_100309512 288
103 3300025904 Ga0207647_10076367 Ga0207647_100763672 288
104 3300025911 Ga0207654_10221892 Ga0207654_102218922 288
105 3300025914 Ga0207671_10048568 Ga0207671_100485684 288
106 3300025914 Ga0207671_10216530 Ga0207671_102165302 288
107 3300025949 Ga0207667_10245449 Ga0207667_102454492 288
108 3300028379 Ga0268266_10000010 Ga0268266_10000010411 288
109 3300028381 Ga0268264_10000012 Ga0268264_10000012250 288
110 3300028786 Ga0307517_10005170 Ga0307517_1000517010 288
111 3300028786 Ga0307517_10068171 Ga0307517_100681712 288
112 3300028786 Ga0307517_10101914 Ga0307517_101019142 288
113 3300028794 Ga0307515_10001368 Ga0307515_1000136856 288
114 3300028794 Ga0307515_10001915 Ga0307515_1000191510 288
115 3300031507 Ga0307509_10136271 Ga0307509_101362712 288
116 3300033180 Ga0307510_10015380 Ga0307510_100153805 288
117 3300041413 Ga0439465_0090996 Ga0439465_0090996_150_1022 288
118 3300044765 Ga0466970_0136808 Ga0466970_0136808_265_1146 288
119 3300044842 Ga0466957_0105201 Ga0466957_0105201_181_1053 288
120 3300046460 Ga0495638_0062652 Ga0495638_0062652_1288_2163 288
121 3300046460 Ga0495638_0105339 Ga0495638_0105339_513_1379 288
122 3300046471 Ga0495650_0000036 Ga0495650_0000036_392252_393130 288
123 3300046492 Ga0495585_0000173 Ga0495585_0000173_11284_12162 288
124 3300046492 Ga0495585_0003037 Ga0495585_0003037_1022_1897 288
125 3300046492 Ga0495585_0153319 Ga0495585_0153319_69_944 288
126 3300046507 Ga0495606_0000008 Ga0495606_0000008_46949_47827 288
127 3300046507 Ga0495606_0008101 Ga0495606_0008101_623_1504 288
128 3300046512 Ga0495610_0031692 Ga0495610_0031692_1581_2459 288
129 3300046513 Ga0495616_0004145 Ga0495616_0004145_5787_6665 288
130 3300046520 Ga0495637_0070774 Ga0495637_0070774_96_974 288
131 3300046524 Ga0495648_0000462 Ga0495648_0000462_2281_3156 288
132 3300046538 Ga0495609_0005195 Ga0495609_0005195_1847_2722 288
133 3300046558 Ga0495633_0000029 Ga0495633_0000029_6478_7353 288
134 3300046558 Ga0495633_0010743 Ga0495633_0010743_648_1526 288
135 3300046616 Ga0495668_0000010 Ga0495668_0000010_79288_80163 288
136 3300046648 Ga0495611_0000172 Ga0495611_0000172_22333_23214 288
137 3300046648 Ga0495611_0038382 Ga0495611_0038382_1159_2034 288
138 3300046660 Ga0495625_0000017 Ga0495625_0000017_288253_289131 288
139 3300046660 Ga0495625_0000678 Ga0495625_0000678_32242_33117 288
140 3300046665 Ga0495661_0003637 Ga0495661_0003637_1423_2301 288
141 3300046665 Ga0495661_0004879 Ga0495661_0004879_323_1201 288
142 3300046683 Ga0495658_0070342 Ga0495658_0070342_298_1173 288
143 3300046692 Ga0495671_0041927 Ga0495671_0041927_766_1644 288
144 3300046694 Ga0495649_0000121 Ga0495649_0000121_56978_57856 288
145 3300046694 Ga0495649_0053912 Ga0495649_0053912_1166_2047 288
146 3300047443 Ga0495687_000009 Ga0495687_000009_219242_220117 288
147 3300047472 Ga0495686_0000078 Ga0495686_0000078_174544_175425 288
148 3300047472 Ga0495686_0002440 Ga0495686_0002440_11425_12300 288
149 3300050493 nmdc:mga0k408_1321_c2 nmdc:mga0k408_1321_c2_1677_2552 288
150 3300050493 nmdc:mga0k408_20643_c1 nmdc:mga0k408_20643_c1_2735_3613 288
151 3300053091 Ga0500647_0026612 Ga0500647_0026612_1188_2063 288
152 3300053125 Ga0500618_000011 Ga0500618_000011_43577_44452 288
153 3300053146 Ga0500588_0010260 Ga0500588_0010260_1217_2098 288
154 3300053153 Ga0500616_0090035 Ga0500616_0090035_323_1195 288
155 3300053156 Ga0500622_0000358 Ga0500622_0000358_17284_18159 288
156 3300053156 Ga0500622_0021825 Ga0500622_0021825_1943_2818 288
157 3300001979 JGI24740J21852_10003618 JGI24740J21852_100036182 289
158 3300002738 JGI25154J39366_1000078 JGI25154J39366_100007831 289
159 3300003316 rootH1_10171430 rootH1_101714302 289
160 3300003323 rootH1_10157530 rootH1_101575303 289
161 3300003354 JGI25160J50197_1001449 JGI25160J50197_10014492 289
162 3300009545 Ga0105237_10030165 Ga0105237_100301653 289
163 3300010375 Ga0105239_10044321 Ga0105239_100443214 289
164 3300013307 Ga0157372_10157732 Ga0157372_101577322 289
165 3300025246 Ga0209646_1000004 Ga0209646_1000004623 289
166 3300025250 Ga0209026_1000136 Ga0209026_100013636 289
167 3300025297 Ga0209758_1026431 Ga0209758_10264312 289
168 3300025302 Ga0207426_1000002 Ga0207426_100000285 289
169 3300025302 Ga0207426_1000367 Ga0207426_100036713 289
170 3300031251 Ga0265327_10000212 Ga0265327_1000021221 289
171 3300048929 Ga0496126_0003532 Ga0496126_0003532_6878_7762 289
172 3300049570 Ga0501033_0340175 Ga0501033_0340175_55_924 289
173 3300049705 Ga0501225_0000154 Ga0501225_0000154_8076_8951 289
174 3300049823 Ga0501044_0481071 Ga0501044_0481071_183_1052 289
175 3300053086 Ga0500578_0000042 Ga0500578_0000042_18194_19069 289
176 3300053086 Ga0500578_0027268 Ga0500578_0027268_2262_3137 289
177 3300053131 Ga0500652_014153 Ga0500652_014153_855_1724 289
178 3300053177 Ga0500636_0045301 Ga0500636_0045301_226_1101 289
179 3300003781 Ga0055536_1000038 Ga0055536_100003828 291
180 3300003791 Ga0055530_10000250 Ga0055530_100002508 291
181 3300005288 Ga0065714_10070780 Ga0065714_100707801 291
182 3300005288 Ga0065714_10092763 Ga0065714_100927632 291
183 3300009036 Ga0105244_10078937 Ga0105244_100789372 291
184 3300013100 Ga0157373_10048107 Ga0157373_100481073 291
185 3300013104 Ga0157370_10086021 Ga0157370_100860212 291
186 3300013105 Ga0157369_10000007 Ga0157369_10000007252 291
187 3300013306 Ga0163162_10000035 Ga0163162_1000003587 291
188 3300015262 Ga0182007_10000007 Ga0182007_10000007119 291
189 3300017792 Ga0163161_10000518 Ga0163161_1000051811 291
190 3300025292 Ga0209676_1000201 Ga0209676_100020175 291
191 3300025298 Ga0209050_1000203 Ga0209050_100020375 291
192 3300031731 Ga0307405_10000044 Ga0307405_100000444 291
193 3300046512 Ga0495610_0000503 Ga0495610_0000503_19221_20096 291
194 3300046660 Ga0495625_0000374 Ga0495625_0000374_46208_47155 291
195 2162886007 SwRhRL2b_contig_3070855 SwRhRL2b_0918.00004100 292
196 3300005288 Ga0065714_10002907 Ga0065714_100029079 292
197 3300005289 Ga0065704_10000258 Ga0065704_1000025810 292
198 3300013100 Ga0157373_10000123 Ga0157373_1000012310 292
199 3300013102 Ga0157371_10006559 Ga0157371_100065592 292
200 3300013104 Ga0157370_10004535 Ga0157370_100045355 292
201 3300015261 Ga0182006_1000220 Ga0182006_100022026 292
202 3300015261 Ga0182006_1000233 Ga0182006_100023342 292
203 3300015261 Ga0182006_1002077 Ga0182006_10020778 292
204 3300017792 Ga0163161_10004104 Ga0163161_1000410410 292
205 3300017792 Ga0163161_10178815 Ga0163161_101788152 292
206 3300031903 Ga0307407_10000025 Ga0307407_1000002564 292
207 3300031911 Ga0307412_10000026 Ga0307412_10000026157 292
208 3300031995 Ga0307409_100159177 Ga0307409_1001591773 292
209 3300032002 Ga0307416_100000068 Ga0307416_10000006849 292
210 3300032004 Ga0307414_10000708 Ga0307414_100007083 292
211 3300032004 Ga0307414_10014668 Ga0307414_100146683 292
212 3300046512 Ga0495610_0000976 Ga0495610_0000976_4269_5147 292

Structural Annotation

Top 5 Hits

ID Description Score Start End
3n8b-assembly1.cif.gz_B crystal structure of borrelia burgdorferi pur-alpha 0.705 92 123
6r5z-assembly2.cif.gz_E 9-bladed beta-propeller formed by three 3-bladed fragments 0.694 162 275
7mqa-assembly1.cif.gz_LR cryo-em structure of the human ssu processome, state post-a1 0.6182 44 286
8i7r-assembly1.cif.gz_P3 in situ structure of axonemal doublet microtubules in mouse sperm with 48-nm repeat 0.6024 40 274
1l0q-assembly3.cif.gz_C tandem yvtn beta-propeller and pkd domains from an archaeal surface layer protein 0.5866 39 275
ID Description Score Start End Superfamily
af_P42841_71_212_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7813 162 284 2.130.10.10
af_A4HYJ4_23_151_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.7537 162 284 2.40.128.630
af_I1LDJ8_443_572_2.110.10.10 Mainly Beta;4 Propeller;Hemopexin;Hemopexin-like domain 0.7433 202 275 2.110.10.10
af_Q9VT91_700_864_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.742 162 275 2.130.10.10
af_O82266_16_144_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7306 151 261 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A4R0NZF0-F1-model_v4 Uncharacterized protein 0.9917 98 277
AF-A0A3E1NE17-F1-model_v4 Uncharacterized protein 0.987 22 289
AF-A0A563TZW9-F1-model_v4 Uncharacterized protein 0.9775 19 289
AF-A0A4R0NZF0-F1-model_v4 Uncharacterized protein 0.965 98 277
AF-A0A563TZW9-F1-model_v4 Uncharacterized protein 0.9565 19 289

Feature Viewer

pLDDT pTM Quality
90.53 0.88 High
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Predicted Structure (AlphaFold2)

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