F323203

General Info

Members Datasets Scaffolds Average Seq Length
212 146 425 454

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0099530|Ga0495638_0099530_164_1726
Length 499
Sequence MTPMHRAADASPSRSRISRPSRRGSAPPAAWLVVALACAGQFLVVLDVSVVNVALPSMRTDLGMSASGLQWVVNAYAIAFAGFMLLGGRAGDLYGRKRMFLVGLALFTVASLAGGLAQDGWQLLLARAAQGLGAAVLAPSTLTIVTSAVPEGAARARAIVDTLSWRWVLLINVPVGAVVLLSSLRWLPESRAGDGRRLDLPGAVLVTAGLGVLAYGISQTEAEGWTSAATLLPLAAGLALIVLFLVVEARTAAPLMPLGLFRVRAVSSANAAMFLCGSAMFCMWFFMTLYAQNVLGYTPLEAGLALVPSSLAVLIGSKVAPRFMPVLGARNVAVLGTLVAAVGFGWQSLMTARGDYLTEIMFPGILMMLGAGLTATPLAALATAGAAPGEAGLVSGLVNTSRTMGGSLGLAVMSTIAAARTARSGGGTAEALTEGYALAFRTGAGVLLGGVVLMVVWLPWGKEAGVSSVAGAGVEPGVVTEGVDPAEAAQGAASTSSEK

Samples

Sample ID Description Type Environment
1 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
5 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
6 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
7 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
8 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
9 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
10 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
11 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
12 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
14 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
15 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
16 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
17 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
18 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
19 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
20 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
21 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
22 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
23 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
24 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
25 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
26 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
27 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
28 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
29 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
30 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
31 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
32 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
33 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
34 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
35 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
36 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
37 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
38 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
39 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
40 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
41 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
42 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
43 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
44 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
45 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
46 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
47 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
48 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
49 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
50 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
51 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
52 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
53 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
54 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
55 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
56 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
57 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
58 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
59 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
60 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
61 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
62 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
63 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
64 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
65 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
66 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
67 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
68 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
69 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
70 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
71 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
72 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
73 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
74 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
75 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
76 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
77 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
78 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
79 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
82 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
83 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
84 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
85 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
86 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
87 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
88 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
89 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
90 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
91 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
92 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
108 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
109 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
110 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
111 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
112 2643221647 Streptomyces sp. Root369 Isolate Unclassified
113 2643221714 Streptomyces sp. Root264 Isolate Unclassified
114 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
115 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
116 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
117 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
118 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
119 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
120 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
121 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
122 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
123 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
124 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
125 2867428634 Streptomyces sp. RP5T Isolate Unclassified
126 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
127 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
128 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
129 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
130 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
131 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
132 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
133 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
134 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
135 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
136 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
137 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
138 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
139 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
140 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
141 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
142 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
143 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
144 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
145 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
146 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.08
Metatranscriptomes 0
Isolates 17.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.94
Nodule 0
Rhizoplane 0.47
Rhizosphere 80.66
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495638_0099530 3300046460 Bacteria 1740
2 rootH1_10012523 3300003316 Bacteria 19300
3 rootH1_10012523 3300003323 Bacteria 7871
4 rootH2_10012770 3300003320 Bacteria 8180
5 rootH2_10017233 3300003320 Bacteria 3521
6 rootH2_10109870 3300003320 Bacteria 1906
7 Ga0070665_100122618 3300005548 Bacteria 2601
8 Ga0075363_100015691 3300006048 Bacteria 3728
9 Ga0105246_10002282 3300011119 Bacteria 11560
10 Ga0157372_10094585 3300013307 Bacteria 3403
11 Ga0182008_10001748 3300014497 Bacteria 14267
12 Ga0183367_1009 3300015688 Bacteria 484598
13 Ga0207647_10059989 3300025904 Bacteria 2326
14 Ga0207702_10033807 3300026078 Bacteria 4273
15 Ga0268266_10220497 3300028379 Bacteria 1743
16 Ga0307517_10031474 3300028786 Bacteria 6172
17 Ga0307515_10000140 3300028794 Bacteria 172330
18 Ga0307511_10000459 3300030521 Bacteria 44012
19 Ga0307512_10001964 3300030522 Bacteria 27450
20 Ga0307512_10120109 3300030522 Bacteria 1693
21 Ga0307509_10011190 3300031507 Bacteria 10909
22 Ga0307509_10057066 3300031507 Bacteria 4142
23 Ga0307508_10002676 3300031616 Bacteria 18658
24 Ga0307508_10009324 3300031616 Bacteria 9031
25 Ga0307514_10022307 3300031649 Bacteria 5148
26 Ga0307514_10044823 3300031649 Bacteria 3463
27 Ga0307514_10065796 3300031649 Bacteria 2743
28 Ga0307516_10007958 3300031730 Bacteria 12065
29 Ga0307516_10020451 3300031730 Bacteria 6838
30 Ga0307518_10017639 3300031838 Bacteria 5118
31 Ga0307518_10133700 3300031838 Bacteria 1740
32 Ga0307507_10042418 3300033179 Bacteria 4534
33 Ga0307510_10003641 3300033180 Bacteria 17980
34 Ga0307510_10105263 3300033180 Bacteria 2590
35 Ga0307510_10140142 3300033180 Bacteria 2064
36 Ga0395898_0041204 3300037466 Bacteria 4562
37 Ga0395898_0058282 3300037466 Bacteria 3760
38 Ga0395901_0080358 3300038443 Bacteria 3404
39 Ga0439439_0004663 3300041406 Bacteria 3099
40 Ga0439433_0000531 3300041999 Bacteria 7189
41 Ga0439449_0000084 3300042007 Bacteria 30447
42 Ga0439449_0009847 3300042007 Bacteria 3617
43 Ga0439449_0014542 3300042007 Bacteria 2958
44 Ga0439455_0003256 3300042012 Bacteria 3078
45 Ga0439457_000636 3300042014 Bacteria 10363
46 Ga0450903_000331 3300042138 Bacteria 10395
47 Ga0439458_0004908 3300042157 Bacteria 3036
48 Ga0466972_0000959 3300044658 Bacteria 13854
49 Ga0466972_0032492 3300044658 Bacteria 2562
50 Ga0466965_0018234 3300044683 Bacteria 3362
51 Ga0466966_0016517 3300044684 Bacteria 4874
52 Ga0466966_0025492 3300044684 Bacteria 3861
53 Ga0466961_0001844 3300044693 Bacteria 13160
54 Ga0466961_0058404 3300044693 Bacteria 2454
55 Ga0466961_0073464 3300044693 Bacteria 2169
56 Ga0466963_0000106 3300044694 Bacteria 30236
57 Ga0466971_0000222 3300044719 Bacteria 21742
58 Ga0466970_0000481 3300044765 Bacteria 19664
59 Ga0466970_0001591 3300044765 Bacteria 10938
60 Ga0466970_0052747 3300044765 Bacteria 2171
61 Ga0466957_0112002 3300044842 Bacteria 1731
62 Ga0466960_0005763 3300044901 Bacteria 4930
63 Ga0466958_0000267 3300045836 Bacteria 20182
64 Ga0466967_0007887 3300045976 Bacteria 7739
65 Ga0466967_0008057 3300045976 Bacteria 7681
66 Ga0466967_0137268 3300045976 Bacteria 2275
67 Ga0495627_019326 3300046453 Bacteria 2286
68 Ga0495592_0075435 3300046454 Bacteria 2448
69 Ga0495603_0014055 3300046455 Bacteria 4840
70 Ga0495629_0005532 3300046459 Bacteria 9428
71 Ga0495629_0013604 3300046459 Bacteria 5871
72 Ga0495629_0016574 3300046459 Bacteria 5289
73 Ga0495629_0131743 3300046459 Bacteria 1741
74 Ga0495653_0129421 3300046463 Bacteria 1789
75 Ga0495580_0040440 3300046472 Bacteria 3330
76 Ga0495605_0026139 3300046474 Bacteria 3036
77 Ga0495605_0057776 3300046474 Bacteria 1866
78 Ga0495662_0008574 3300046476 Bacteria 5022
79 Ga0495662_0023939 3300046476 Bacteria 2947
80 Ga0495664_0004583 3300046477 Bacteria 7560
81 Ga0495585_0012354 3300046492 Bacteria 5032
82 Ga0495596_0014277 3300046500 Bacteria 3347
83 Ga0495606_0004242 3300046507 Bacteria 14499
84 Ga0495616_0015475 3300046513 Bacteria 4243
85 Ga0495618_0044748 3300046514 Bacteria 2792
86 Ga0495630_0004696 3300046517 Bacteria 9588
87 Ga0495643_0010081 3300046522 Bacteria 5828
88 Ga0495648_0108521 3300046524 Bacteria 1515
89 Ga0495666_0069389 3300046526 Bacteria 1677
90 Ga0495652_0065342 3300046529 Bacteria 3057
91 Ga0495652_0095440 3300046529 Bacteria 2423
92 Ga0495640_0026313 3300046533 Bacteria 4205
93 Ga0495640_0030191 3300046533 Bacteria 3883
94 Ga0495586_0012650 3300046535 Bacteria 4476
95 Ga0495597_0048739 3300046542 Bacteria 1873
96 Ga0495622_0053191 3300046557 Bacteria 1878
97 Ga0495634_0014661 3300046642 Bacteria 5643
98 Ga0495634_0045967 3300046642 Bacteria 2948
99 Ga0495625_0010942 3300046660 Bacteria 7448
100 Ga0495657_0000757 3300046675 Bacteria 28736
101 Ga0495657_0086061 3300046675 Bacteria 2025
102 Ga0495646_0000627 3300046680 Bacteria 19270
103 Ga0495658_0104628 3300046683 Bacteria 1694
104 Ga0495613_0005392 3300046689 Bacteria 9609
105 Ga0495613_0006248 3300046689 Bacteria 8908
106 Ga0495613_0019055 3300046689 Bacteria 5114
107 Ga0495613_0025767 3300046689 Bacteria 4382
108 Ga0495613_0038108 3300046689 Bacteria 3563
109 Ga0495671_0047539 3300046692 Bacteria 2144
110 Ga0495649_0053100 3300046694 Bacteria 2195
111 Ga0495649_0078112 3300046694 Bacteria 1771
112 Ga0495589_0091945 3300046794 Bacteria 1473
113 Ga0495600_0044515 3300046809 Bacteria 2895
114 Ga0495600_0063821 3300046809 Bacteria 2407
115 Ga0495581_0027906 3300047315 Bacteria 3274
116 Ga0495581_0027973 3300047315 Bacteria 3269
117 Ga0495604_0003329 3300047317 Bacteria 12808
118 Ga0495604_0010367 3300047317 Bacteria 7381
119 Ga0495636_0015979 3300047318 Bacteria 2994
120 Ga0495636_0016287 3300047318 Bacteria 2969
121 Ga0495636_0026032 3300047318 Bacteria 2378
122 Ga0495676_0010148 3300047321 Bacteria 8551
123 Ga0495676_0012638 3300047321 Bacteria 7599
124 Ga0495676_0025930 3300047321 Bacteria 5052
125 Ga0495680_0010911 3300047322 Bacteria 8073
126 Ga0495687_011441 3300047443 Bacteria 4771
127 Ga0495675_0044332 3300047444 Bacteria 2834
128 Ga0495675_0053038 3300047444 Bacteria 2574
129 Ga0495685_003517 3300047447 Bacteria 5002
130 Ga0495685_022668 3300047447 Bacteria 2161
131 Ga0495681_0004873 3300047470 Bacteria 9072
132 Ga0495684_0081016 3300047471 Bacteria 2464
133 Ga0495593_0003582 3300047673 Bacteria 9277
134 Ga0495602_0151269 3300048088 Bacteria 1824
135 Ga0495614_0013747 3300048089 Bacteria 3549
136 Ga0495614_0028240 3300048089 Bacteria 2417
137 Ga0495626_0036431 3300048091 Bacteria 2343
138 Ga0496109_0060927 3300048912 Bacteria 3449
139 Ga0501031_0090077 3300049568 Bacteria 2000
140 Ga0501031_0129706 3300049568 Bacteria 1647
141 Ga0501032_0019132 3300049569 Bacteria 4791
142 Ga0501032_0036771 3300049569 Bacteria 3341
143 Ga0501033_0043127 3300049570 Bacteria 3360
144 Ga0501033_0047392 3300049570 Bacteria 3195
145 Ga0501033_0171240 3300049570 Bacteria 1559
146 Ga0501034_0041465 3300049571 Bacteria 4657
147 Ga0501034_0044098 3300049571 Bacteria 4511
148 Ga0501036_0037622 3300049572 Bacteria 4093
149 Ga0501037_0049010 3300049573 Bacteria 3093
150 Ga0501038_0008904 3300049574 Bacteria 9211
151 Ga0501038_0058452 3300049574 Bacteria 3306
152 Ga0501038_0099427 3300049574 Bacteria 2425
153 Ga0501038_0103665 3300049574 Bacteria 2365
154 Ga0501038_0117490 3300049574 Bacteria 2196
155 Ga0501042_0006354 3300049578 Bacteria 7666
156 Ga0501043_0001155 3300049579 Bacteria 23219
157 Ga0501043_0105220 3300049579 Bacteria 2217
158 Ga0501043_0130244 3300049579 Bacteria 1971
159 Ga0501046_0005103 3300049580 Bacteria 11781
160 Ga0501047_0005680 3300049581 Bacteria 11741
161 Ga0501047_0011651 3300049581 Bacteria 8314
162 Ga0501047_0020508 3300049581 Bacteria 6345
163 Ga0501047_0034883 3300049581 Bacteria 4857
164 Ga0501047_0067217 3300049581 Bacteria 3454
165 Ga0501047_0080856 3300049581 Bacteria 3124
166 Ga0501047_0183587 3300049581 Bacteria 1958
167 Ga0501073_0030108 3300049589 Bacteria 3877
168 Ga0501080_0052197 3300049742 Bacteria 3805
169 Ga0501035_0025652 3300049822 Bacteria 5402
170 Ga0501035_0041870 3300049822 Bacteria 4134
171 Ga0501035_0075095 3300049822 Bacteria 2989
172 Ga0501044_0017302 3300049823 Bacteria 7732
173 Ga0501044_0026570 3300049823 Bacteria 6127
174 Ga0500583_0034320 3300053092 Bacteria 2255
175 Ga0466962_0000140 3300061719 Bacteria 29637
176 2515854175 2515154155 Bacteria 7985436
177 2585308483 2582581313 Bacteria 10042643
178 2585313308 2582581314 Bacteria 11452267
179 2644268783 2643221647 Bacteria 10741251
180 2644632122 2643221714 Bacteria 9015452
181 2774393480 2773857762 Bacteria 5971770
182 2785368198 2784746768 Bacteria 10036182
183 2786669195 2786546132 Bacteria 10419719
184 2808919430 2808606375 Bacteria 9466072
185 2812350532 2811994878 Bacteria 5992952
186 2812359362 2811994879 Bacteria 9313447
187 2812481494 2811994917 Bacteria 7761064
188 2852640703 2852635781 Bacteria 8251373
189 2862182750 2862178590 Bacteria 8583590
190 2862288474 2862281513 Bacteria 9621493
191 2862295804 2862290372 Bacteria 7471434
192 2867436353 2867428634 Bacteria 9590268
193 2873156823 2873151551 Bacteria 8625867
194 2877682383 2877676314 Bacteria 9512378
195 2912721292 2912715099 Bacteria 9460473
196 2912725293 2912723979 Bacteria 8557534
197 2946066533 2946064051 Bacteria 8957905
198 2946074797 2946072368 Bacteria 8999607
199 2954675658 2954673503 Bacteria 9685905
200 2954688606 2954682443 Bacteria 9862841
201 2954698358 2954691527 Bacteria 10720516
202 2954703875 2954701450 Bacteria 10834262
203 2954717368 2954711539 Bacteria 10867210
204 2954727336 2954721474 Bacteria 10456478
205 2954734456 2954731030 Bacteria 10243860
206 2954746241 2954740390 Bacteria 10229294
207 2954753353 2954749733 Bacteria 10366972
208 2954765354 2954759201 Bacteria 9358192
209 2990088902 2990088156 Bacteria 6657676
210 3002999433 3002998708 Bacteria 11715108
211 8053949790 8053945823 Bacteria 8962862
212 8056060255 8056060235 Bacteria 7259403
213 8056836635 8056829672 Bacteria 9045328
214 Ga0495638_0099530
215 rootH1_10012523
216 rootH2_10012770
217 rootH2_10017233
218 rootH2_10109870
219 Ga0070665_100122618
220 Ga0075363_100015691
221 Ga0105246_10002282
222 Ga0157372_10094585
223 Ga0182008_10001748
224 Ga0183367_1009
225 Ga0207647_10059989
226 Ga0207702_10033807
227 Ga0268266_10220497
228 Ga0307517_10031474
229 Ga0307515_10000140
230 Ga0307511_10000459
231 Ga0307512_10001964
232 Ga0307512_10120109
233 Ga0307509_10011190
234 Ga0307509_10057066
235 Ga0307508_10002676
236 Ga0307508_10009324
237 Ga0307514_10022307
238 Ga0307514_10044823
239 Ga0307514_10065796
240 Ga0307516_10007958
241 Ga0307516_10020451
242 Ga0307518_10017639
243 Ga0307518_10133700
244 Ga0307507_10042418
245 Ga0307510_10003641
246 Ga0307510_10105263
247 Ga0307510_10140142
248 Ga0395898_0041204
249 Ga0395898_0058282
250 Ga0395901_0080358
251 Ga0439439_0004663
252 Ga0439433_0000531
253 Ga0439449_0000084
254 Ga0439449_0009847
255 Ga0439449_0014542
256 Ga0439455_0003256
257 Ga0439457_000636
258 Ga0450903_000331
259 Ga0439458_0004908
260 Ga0466972_0000959
261 Ga0466972_0032492
262 Ga0466965_0018234
263 Ga0466966_0016517
264 Ga0466966_0025492
265 Ga0466961_0001844
266 Ga0466961_0058404
267 Ga0466961_0073464
268 Ga0466963_0000106
269 Ga0466971_0000222
270 Ga0466970_0000481
271 Ga0466970_0001591
272 Ga0466970_0052747
273 Ga0466957_0112002
274 Ga0466960_0005763
275 Ga0466958_0000267
276 Ga0466967_0007887
277 Ga0466967_0008057
278 Ga0466967_0137268
279 Ga0495627_019326
280 Ga0495592_0075435
281 Ga0495603_0014055
282 Ga0495629_0005532
283 Ga0495629_0013604
284 Ga0495629_0016574
285 Ga0495629_0131743
286 Ga0495653_0129421
287 Ga0495580_0040440
288 Ga0495605_0026139
289 Ga0495605_0057776
290 Ga0495662_0008574
291 Ga0495662_0023939
292 Ga0495664_0004583
293 Ga0495585_0012354
294 Ga0495596_0014277
295 Ga0495606_0004242
296 Ga0495616_0015475
297 Ga0495618_0044748
298 Ga0495630_0004696
299 Ga0495643_0010081
300 Ga0495648_0108521
301 Ga0495666_0069389
302 Ga0495652_0065342
303 Ga0495652_0095440
304 Ga0495640_0026313
305 Ga0495640_0030191
306 Ga0495586_0012650
307 Ga0495597_0048739
308 Ga0495622_0053191
309 Ga0495634_0014661
310 Ga0495634_0045967
311 Ga0495625_0010942
312 Ga0495657_0000757
313 Ga0495657_0086061
314 Ga0495646_0000627
315 Ga0495658_0104628
316 Ga0495613_0005392
317 Ga0495613_0006248
318 Ga0495613_0019055
319 Ga0495613_0025767
320 Ga0495613_0038108
321 Ga0495671_0047539
322 Ga0495649_0053100
323 Ga0495649_0078112
324 Ga0495589_0091945
325 Ga0495600_0044515
326 Ga0495600_0063821
327 Ga0495581_0027906
328 Ga0495581_0027973
329 Ga0495604_0003329
330 Ga0495604_0010367
331 Ga0495636_0015979
332 Ga0495636_0016287
333 Ga0495636_0026032
334 Ga0495676_0010148
335 Ga0495676_0012638
336 Ga0495676_0025930
337 Ga0495680_0010911
338 Ga0495687_011441
339 Ga0495675_0044332
340 Ga0495675_0053038
341 Ga0495685_003517
342 Ga0495685_022668
343 Ga0495681_0004873
344 Ga0495684_0081016
345 Ga0495593_0003582
346 Ga0495602_0151269
347 Ga0495614_0013747
348 Ga0495614_0028240
349 Ga0495626_0036431
350 Ga0496109_0060927
351 Ga0501031_0090077
352 Ga0501031_0129706
353 Ga0501032_0019132
354 Ga0501032_0036771
355 Ga0501033_0043127
356 Ga0501033_0047392
357 Ga0501033_0171240
358 Ga0501034_0041465
359 Ga0501034_0044098
360 Ga0501036_0037622
361 Ga0501037_0049010
362 Ga0501038_0008904
363 Ga0501038_0058452
364 Ga0501038_0099427
365 Ga0501038_0103665
366 Ga0501038_0117490
367 Ga0501042_0006354
368 Ga0501043_0001155
369 Ga0501043_0105220
370 Ga0501043_0130244
371 Ga0501046_0005103
372 Ga0501047_0005680
373 Ga0501047_0011651
374 Ga0501047_0020508
375 Ga0501047_0034883
376 Ga0501047_0067217
377 Ga0501047_0080856
378 Ga0501047_0183587
379 Ga0501073_0030108
380 Ga0501080_0052197
381 Ga0501035_0025652
382 Ga0501035_0041870
383 Ga0501035_0075095
384 Ga0501044_0017302
385 Ga0501044_0026570
386 Ga0500583_0034320
387 Ga0466962_0000140
388 2515854175
389 2585308483
390 2585313308
391 2644268783
392 2644632122
393 2774393480
394 2785368198
395 2786669195
396 2808919430
397 2812350532
398 2812359362
399 2812481494
400 2852640703
401 2862182750
402 2862288474
403 2862295804
404 2867436353
405 2873156823
406 2877682383
407 2912721292
408 2912725293
409 2946066533
410 2946074797
411 2954675658
412 2954688606
413 2954698358
414 2954703875
415 2954717368
416 2954727336
417 2954734456
418 2954746241
419 2954753353
420 2954765354
421 2990088902
422 3002999433
423 8053949790
424 8056060255
425 8056836635

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

37

160

0.93

PF07690

MFS_1

Major Facilitator Superfamily

152

410

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8742 11 418
8pnl-assembly1.cif.gz_A outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.8667 21 432
8pnl-assembly2.cif.gz_C outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.8515 21 437
7d5q-assembly1.cif.gz_A structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8189 24 422
8pnl-assembly1.cif.gz_A outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.8166 21 432
ID Description Score Start End Superfamily
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9394 26 199 1.20.1250.20
af_Q2FW85_14_250_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9239 25 247 1.20.1250.20
af_P36554_12_217_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.922 26 217 1.20.1250.20
af_P9WG91_8_214_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9171 25 216 1.20.1250.20
af_P76269_18_258_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9154 27 253 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A535C655-F1-model_v4 MFS transporter 0.972 22 136 GO:0016020
GO:0022857
AF-A0A7A3BRB6-F1-model_v4 Multidrug efflux MFS transporter 0.9547 25 134 GO:0005886
GO:0022857
AF-A0A843G772-F1-model_v4 MFS transporter 0.9543 21 140 GO:0005886
GO:0015297
GO:0046677
GO:1902600
AF-A0A656JVK0-F1-model_v4 Membrane protein 0.9469 42 141 GO:0016020
GO:0022857
AF-A0A843G772-F1-model_v4 MFS transporter 0.9105 21 140 GO:0005886
GO:0015297
GO:0046677
GO:1902600

Map