F323100
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 212 | 163 | 169 | 377 |
Family's Representative Sequence
| Representative Sequence | 3300038443|Ga0395901_0088230|Ga0395901_0088230_1511_2740 |
| Length | 409 |
| Sequence | MDGSGSAAWRVPLSDVLVDDELRAAALETLSSGWWSMGPRVEALEAAFAEQLGARHAIAVANGTAALHLALLACGCGPGDEVVLPSLNFVAAANVVRHAGARPVFCDVRGADDLNLDPGDVEAALTPRTKAVIALHYGGHACDIERLAELARERRFELVEDAAHAPAARLNGRALGTFGRAGCFSFFSNKNLPVGEGGMVVTDDDGVAGRLRHLRSHGMTTLTWDRHRGHASGYDVVTAGFNYRLDELRAAIGLVQLRRLEDGNARRGRLVARYRRLLDGELGITMPFAEAEDAGAAQHLAVAVLPAGISRDAVRRALAGARIQTSVHYPPIHLFSAYRDADTRPLPRTEELAARILTLPLYPHLEEREVELVAAALLDAVAACLPERAAAGRGEAVPGAVLGRQPEHA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2597489875 | Mesorhizobium ciceri ca181 | Isolate | Unclassified |
| 2 | 2756170246 | Mesorhizobium loti DSM 2626 | Isolate | Nodule |
| 3 | 2841734538 | Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 | Isolate | Nodule |
| 4 | 2844002411 | Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 | Isolate | Nodule |
| 5 | 2856342000 | Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 | Isolate | Nodule |
| 6 | 2856364286 | Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 | Isolate | Nodule |
| 7 | 2869162929 | Mesorhizobium sanjuanii BSA136 | Isolate | Nodule |
| 8 | 2869285874 | Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 | Isolate | Nodule |
| 9 | 2871429161 | Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 | Isolate | Nodule |
| 10 | 2871466892 | Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 | Isolate | Nodule |
| 11 | 2871474448 | Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 | Isolate | Nodule |
| 12 | 2874146452 | Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 | Isolate | Nodule |
| 13 | 2874155637 | Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 | Isolate | Nodule |
| 14 | 2876413966 | Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 | Isolate | Nodule |
| 15 | 2878745973 | Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 | Isolate | Nodule |
| 16 | 2878788777 | Mesorhizobium sp. M6A.T.Ca.TU.002.02.2.1 | Isolate | Nodule |
| 17 | 2888343758 | Mesorhizobium sp. AA22 | Isolate | Unclassified |
| 18 | 2903492973 | Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 | Isolate | Nodule |
| 19 | 2906308376 | Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 | Isolate | Nodule |
| 20 | 2906321335 | Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 | Isolate | Nodule |
| 21 | 2906378014 | Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 | Isolate | Nodule |
| 22 | 2924754689 | Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 | Isolate | Nodule |
| 23 | 2937813078 | Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 | Isolate | Nodule |
| 24 | 2937836603 | Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 | Isolate | Nodule |
| 25 | 2958041894 | Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 | Isolate | Nodule |
| 26 | 2958064165 | Mesorhizobium sp. SARCC-RB16n | Isolate | Unclassified |
| 27 | 2958071322 | Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 | Isolate | Nodule |
| 28 | 2958130278 | Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 | Isolate | Nodule |
| 29 | 2958179912 | Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 | Isolate | Nodule |
| 30 | 2961077736 | Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 | Isolate | Nodule |
| 31 | 2968138860 | Mesorhizobium sp. M7A.F.Ca.ET.027.03.2.1 | Isolate | Nodule |
| 32 | 2970524798 | Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 | Isolate | Nodule |
| 33 | 2970540015 | Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 | Isolate | Nodule |
| 34 | 2977843712 | Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 | Isolate | Nodule |
| 35 | 2977898635 | Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 | Isolate | Nodule |
| 36 | 2977986579 | Mesorhizobium intechi BD68 | Isolate | Unclassified |
| 37 | 3004232784 | Mesorhizobium sp. M7A.T.Ca.US.000.02.1.1 | Isolate | Nodule |
| 38 | 3004268573 | Mesorhizobium sp. M7A.F.Ca.US.010.02.1.1 | Isolate | Nodule |
| 39 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 40 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 41 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 42 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 43 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 44 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 45 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 46 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 47 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 48 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 49 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 50 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 51 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 52 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 53 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 54 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 55 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 56 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 57 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 58 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 59 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 60 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 61 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 62 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 63 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 64 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 65 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 66 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 67 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 68 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 69 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 70 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 71 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 72 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 74 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 75 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 76 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 77 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 78 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 79 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 80 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 81 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 82 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 83 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 84 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 85 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 86 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 102 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 103 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 104 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 105 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 106 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 107 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 108 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 109 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 110 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 111 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 112 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 113 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 114 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 115 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 116 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 117 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 118 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 119 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 120 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 121 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 122 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 123 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 124 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 125 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 136 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 137 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 138 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 139 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 140 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 141 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 142 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 143 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 145 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 146 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 147 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 149 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
| 151 | 3300059477 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 152 | 3300059490 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 153 | 3300059505 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 154 | 3300059506 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 52R_CW_T2_R2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 155 | 3300059507 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 98R_CW_T2_R3 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 156 | 3300059508 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 157 | 3300059511 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 158 | 3300059626 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 173R_CD_T3_R4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 159 | 8004387939 | Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 | Isolate | Nodule |
| 160 | 8004395343 | Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 | Isolate | Nodule |
| 161 | 8004633249 | Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 | Isolate | Nodule |
| 162 | 8004640170 | Mesorhizobium sp. GbtcB19 | Isolate | Unclassified |
| 163 | 8004714634 | Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 75.94 |
| Metatranscriptomes | 3.77 |
| Isolates | 20.28 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 5.66 |
| Nodule | 17.92 |
| Rhizoplane | 2.83 |
| Rhizosphere | 66.51 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 7.08 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10006416 | 3300001979 | Bacteria | 4874 |
| 2 | JGI25156J39149_1005120 | 3300002705 | Bacteria | 3859 |
| 3 | JGI25157J39369_1000272 | 3300002741 | Bacteria | 37848 |
| 4 | JGI25165J46597_1000020 | 3300003214 | Bacteria | 370477 |
| 5 | Ga0070683_100001676 | 3300005329 | Bacteria | 17200 |
| 6 | Ga0070683_100107495 | 3300005329 | Bacteria | 2630 |
| 7 | Ga0070687_100144717 | 3300005343 | Bacteria | 1388 |
| 8 | Ga0070659_100074752 | 3300005366 | Bacteria | 2700 |
| 9 | Ga0070711_100136320 | 3300005439 | Bacteria | 1835 |
| 10 | Ga0070694_100130895 | 3300005444 | Bacteria | 1812 |
| 11 | Ga0070708_100148146 | 3300005445 | Bacteria | 2181 |
| 12 | Ga0070663_100031559 | 3300005455 | Bacteria | 3641 |
| 13 | Ga0070678_100025925 | 3300005456 | Bacteria | 3954 |
| 14 | Ga0070681_10079169 | 3300005458 | Bacteria | 3243 |
| 15 | Ga0070706_100014468 | 3300005467 | Bacteria | 7289 |
| 16 | Ga0070707_100001484 | 3300005468 | Bacteria | 22929 |
| 17 | Ga0070707_100356269 | 3300005468 | Bacteria | 1421 |
| 18 | Ga0070698_100023978 | 3300005471 | Bacteria | 6370 |
| 19 | Ga0070699_100061945 | 3300005518 | Unclassified | 3242 |
| 20 | Ga0070699_100097748 | 3300005518 | Bacteria | 2572 |
| 21 | Ga0070684_100001039 | 3300005535 | Bacteria | 19818 |
| 22 | Ga0070684_100054228 | 3300005535 | Bacteria | 3493 |
| 23 | Ga0070684_100112357 | 3300005535 | Bacteria | 2444 |
| 24 | Ga0070697_100078551 | 3300005536 | Unclassified | 2716 |
| 25 | Ga0070697_100281454 | 3300005536 | Bacteria | 1427 |
| 26 | Ga0070686_100154879 | 3300005544 | Bacteria | 1608 |
| 27 | Ga0070695_100000003 | 3300005545 | Bacteria | 111545 |
| 28 | Ga0070696_100203838 | 3300005546 | Unclassified | 1478 |
| 29 | Ga0070704_100015353 | 3300005549 | Bacteria | 4810 |
| 30 | Ga0070704_100028563 | 3300005549 | Bacteria | 3713 |
| 31 | Ga0070664_100069818 | 3300005564 | Bacteria | 3007 |
| 32 | Ga0070664_100119025 | 3300005564 | Bacteria | 2311 |
| 33 | Ga0068857_100000524 | 3300005577 | Bacteria | 27687 |
| 34 | Ga0068857_100045722 | 3300005577 | Bacteria | 3884 |
| 35 | Ga0068856_100071457 | 3300005614 | Bacteria | 3436 |
| 36 | Ga0068856_100125127 | 3300005614 | Bacteria | 2574 |
| 37 | Ga0068856_100256244 | 3300005614 | Bacteria | 1765 |
| 38 | Ga0081455_10022743 | 3300005937 | Bacteria | 5849 |
| 39 | Ga0081455_10064605 | 3300005937 | Bacteria | 3063 |
| 40 | Ga0081540_1057249 | 3300005983 | Bacteria | 1886 |
| 41 | Ga0070717_10087134 | 3300006028 | Bacteria | 2629 |
| 42 | Ga0075365_10008904 | 3300006038 | Bacteria | 5730 |
| 43 | Ga0075365_10098925 | 3300006038 | Bacteria | 1996 |
| 44 | Ga0075364_10012652 | 3300006051 | Bacteria | 5169 |
| 45 | Ga0075362_10013545 | 3300006177 | Bacteria | 3266 |
| 46 | Ga0075367_10090318 | 3300006178 | Bacteria | 1863 |
| 47 | Ga0097621_100068810 | 3300006237 | Bacteria | 2921 |
| 48 | Ga0068871_100162642 | 3300006358 | Unclassified | 1910 |
| 49 | Ga0075434_100000192 | 3300006871 | Bacteria | 40622 |
| 50 | Ga0075435_100009572 | 3300007076 | Bacteria | 7029 |
| 51 | Ga0105245_10021338 | 3300009098 | Bacteria | 5680 |
| 52 | Ga0105245_10127187 | 3300009098 | Bacteria | 2387 |
| 53 | Ga0105243_10175619 | 3300009148 | Bacteria | 1859 |
| 54 | Ga0105243_10337516 | 3300009148 | Bacteria | 1379 |
| 55 | Ga0105249_10083786 | 3300009553 | Bacteria | 2968 |
| 56 | Ga0163163_10148015 | 3300014325 | Bacteria | 2392 |
| 57 | Ga0157377_10073219 | 3300014745 | Bacteria | 1985 |
| 58 | Ga0157376_10094832 | 3300014969 | Unclassified | 2593 |
| 59 | Ga0213875_10008409 | 3300021388 | Bacteria | 5290 |
| 60 | Ga0209026_1000402 | 3300025250 | Bacteria | 38524 |
| 61 | Ga0209759_1000557 | 3300025256 | Bacteria | 37912 |
| 62 | Ga0209233_1000047 | 3300025261 | Bacteria | 459614 |
| 63 | Ga0209233_1006853 | 3300025261 | Bacteria | 3644 |
| 64 | Ga0207685_10001197 | 3300025905 | Bacteria | 5243 |
| 65 | Ga0207684_10012639 | 3300025910 | Bacteria | 7332 |
| 66 | Ga0207693_10012058 | 3300025915 | Bacteria | 6990 |
| 67 | Ga0207652_10113774 | 3300025921 | Unclassified | 2402 |
| 68 | Ga0207646_10024418 | 3300025922 | Bacteria | 5538 |
| 69 | Ga0207659_10124703 | 3300025926 | Bacteria | 1979 |
| 70 | Ga0207687_10009475 | 3300025927 | Bacteria | 6367 |
| 71 | Ga0207690_10045535 | 3300025932 | Bacteria | 2899 |
| 72 | Ga0207665_10001782 | 3300025939 | Bacteria | 14496 |
| 73 | Ga0207679_10178414 | 3300025945 | Bacteria | 1755 |
| 74 | Ga0207712_10074451 | 3300025961 | Bacteria | 2452 |
| 75 | Ga0207702_10069890 | 3300026078 | Bacteria | 3019 |
| 76 | Ga0207702_10252283 | 3300026078 | Bacteria | 1657 |
| 77 | Ga0207648_10241539 | 3300026089 | Bacteria | 1608 |
| 78 | Ga0207674_10040996 | 3300026116 | Bacteria | 4791 |
| 79 | Ga0207674_10068858 | 3300026116 | Bacteria | 3560 |
| 80 | Ga0207674_10102181 | 3300026116 | Bacteria | 2847 |
| 81 | Ga0207674_10153014 | 3300026116 | Unclassified | 2263 |
| 82 | Ga0207683_10007060 | 3300026121 | Bacteria | 9632 |
| 83 | Ga0307409_100305709 | 3300031995 | Bacteria | 1482 |
| 84 | Ga0307416_100302283 | 3300032002 | Bacteria | 1591 |
| 85 | Ga0307415_100211248 | 3300032126 | Bacteria | 1548 |
| 86 | Ga0373944_0006287 | 3300035089 | Bacteria | 3149 |
| 87 | Ga0373945_0015242 | 3300035116 | Unclassified | 2583 |
| 88 | Ga0373943_0003482 | 3300035170 | Bacteria | 7164 |
| 89 | Ga0373946_0025040 | 3300035171 | Bacteria | 2345 |
| 90 | Ga0373935_0081390 | 3300035692 | Bacteria | 2105 |
| 91 | Ga0395899_0072262 | 3300037312 | Bacteria | 2524 |
| 92 | Ga0395899_0073297 | 3300037312 | Bacteria | 2504 |
| 93 | Ga0395899_0077663 | 3300037312 | Bacteria | 2421 |
| 94 | Ga0395900_0004432 | 3300037418 | Bacteria | 14883 |
| 95 | Ga0395900_0005049 | 3300037418 | Bacteria | 13849 |
| 96 | Ga0395900_0017738 | 3300037418 | Bacteria | 7264 |
| 97 | Ga0395900_0035123 | 3300037418 | Bacteria | 5164 |
| 98 | Ga0395900_0070704 | 3300037418 | Bacteria | 3588 |
| 99 | Ga0395900_0220243 | 3300037418 | Bacteria | 1913 |
| 100 | Ga0395898_0002779 | 3300037466 | Bacteria | 20110 |
| 101 | Ga0395898_0009310 | 3300037466 | Bacteria | 10326 |
| 102 | Ga0395898_0023214 | 3300037466 | Bacteria | 6269 |
| 103 | Ga0395898_0078644 | 3300037466 | Bacteria | 3182 |
| 104 | Ga0395898_0344902 | 3300037466 | Bacteria | 1420 |
| 105 | Ga0395905_0002562 | 3300037471 | Bacteria | 20023 |
| 106 | Ga0395905_0012010 | 3300037471 | Bacteria | 8353 |
| 107 | Ga0395905_0036506 | 3300037471 | Bacteria | 4616 |
| 108 | Ga0395905_0097704 | 3300037471 | Bacteria | 2757 |
| 109 | Ga0395905_0186003 | 3300037471 | Bacteria | 1949 |
| 110 | Ga0436364_0519080 | 3300037853 | Bacteria | 4331 |
| 111 | Ga0395901_0003220 | 3300038443 | Bacteria | 16424 |
| 112 | Ga0395901_0009151 | 3300038443 | Bacteria | 10032 |
| 113 | Ga0395901_0015152 | 3300038443 | Bacteria | 7839 |
| 114 | Ga0395901_0026131 | 3300038443 | Bacteria | 5994 |
| 115 | Ga0395901_0088230 | 3300038443 | Bacteria | 3244 |
| 116 | Ga0395901_0096094 | 3300038443 | Bacteria | 3105 |
| 117 | Ga0395901_0117119 | 3300038443 | Bacteria | 2799 |
| 118 | Ga0395901_0336804 | 3300038443 | Bacteria | 1559 |
| 119 | Ga0400488_04941 | 3300038741 | Bacteria | 1999 |
| 120 | Ga0436365_0289188 | 3300039437 | Bacteria | 8660 |
| 121 | Ga0466969_0026365 | 3300044656 | Bacteria | 2981 |
| 122 | Ga0466966_0054480 | 3300044684 | Bacteria | 2534 |
| 123 | Ga0466966_0062717 | 3300044684 | Bacteria | 2343 |
| 124 | Ga0466961_0041771 | 3300044693 | Bacteria | 2940 |
| 125 | Ga0466963_0012337 | 3300044694 | Bacteria | 5227 |
| 126 | Ga0466963_0031488 | 3300044694 | Bacteria | 3429 |
| 127 | Ga0466963_0083025 | 3300044694 | Unclassified | 2173 |
| 128 | Ga0466971_0053516 | 3300044719 | Bacteria | 1819 |
| 129 | Ga0466957_0002133 | 3300044842 | Bacteria | 10584 |
| 130 | Ga0466957_0059128 | 3300044842 | Bacteria | 2349 |
| 131 | Ga0466959_0010728 | 3300045049 | Bacteria | 6562 |
| 132 | Ga0466959_0036709 | 3300045049 | Bacteria | 3620 |
| 133 | Ga0466958_0125143 | 3300045836 | Bacteria | 1611 |
| 134 | Ga0495641_0022314 | 3300046461 | Bacteria | 3168 |
| 135 | Ga0495641_0047513 | 3300046461 | Bacteria | 1970 |
| 136 | Ga0495651_0142133 | 3300046462 | Bacteria | 1739 |
| 137 | Ga0495605_0043382 | 3300046474 | Bacteria | 2230 |
| 138 | Ga0495628_0168059 | 3300046516 | Archaea | 1664 |
| 139 | Ga0495630_0063399 | 3300046517 | Unclassified | 2776 |
| 140 | Ga0495642_0000573 | 3300046528 | Bacteria | 18451 |
| 141 | Ga0495656_0029635 | 3300046615 | Bacteria | 2205 |
| 142 | Ga0495661_0000630 | 3300046665 | Bacteria | 35776 |
| 143 | Ga0495676_0001350 | 3300047321 | Bacteria | 21088 |
| 144 | Ga0495680_0070324 | 3300047322 | Bacteria | 2669 |
| 145 | Ga0496102_0241470 | 3300048905 | Bacteria | 1703 |
| 146 | Ga0496108_0037691 | 3300048911 | Bacteria | 4028 |
| 147 | Ga0496109_0023013 | 3300048912 | Bacteria | 5525 |
| 148 | Ga0496109_0064239 | 3300048912 | Bacteria | 3359 |
| 149 | Ga0496112_0067311 | 3300048915 | Bacteria | 3535 |
| 150 | Ga0496114_0188046 | 3300048917 | Bacteria | 1806 |
| 151 | Ga0496124_0015795 | 3300048927 | Bacteria | 7214 |
| 152 | Ga0496126_0136756 | 3300048929 | Bacteria | 2113 |
| 153 | Ga0501040_0074767 | 3300049576 | Bacteria | 2342 |
| 154 | Ga0501035_0048878 | 3300049822 | Bacteria | 3792 |
| 155 | nmdc:mga03683_34974_c1 | 3300050489 | Bacteria | 2036 |
| 156 | nmdc:mga00v17_37188_c1 | 3300050491 | Bacteria | 2905 |
| 157 | nmdc:mga06z11_63056_c1 | 3300050494 | Bacteria | 1938 |
| 158 | nmdc:mga0n895_11372_c1 | 3300050512 | Bacteria | 7936 |
| 159 | nmdc:mga0a205_118508_c1 | 3300050515 | Bacteria | 2546 |
| 160 | Ga0495595_0002518 | 3300053084 | Bacteria | 7190 |
| 161 | Ga0500627_0048089 | 3300053158 | Bacteria | 1852 |
| 162 | Ga0587084_000705 | 3300059477 | Bacteria | 2816 |
| 163 | Ga0587066_000451 | 3300059490 | Bacteria | 3323 |
| 164 | Ga0587083_0010480 | 3300059505 | Bacteria | 1504 |
| 165 | Ga0587085_000504 | 3300059506 | Bacteria | 2945 |
| 166 | Ga0587086_001166 | 3300059507 | Bacteria | 2188 |
| 167 | Ga0587088_001289 | 3300059508 | Bacteria | 2554 |
| 168 | Ga0587091_002672 | 3300059511 | Bacteria | 2148 |
| 169 | Ga0587115_001185 | 3300059626 | Bacteria | 2288 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300044693 | Ga0466961_0041771 | Ga0466961_0041771_1919_2911 | 324 |
| 2 | 3300005544 | Ga0070686_100154879 | Ga0070686_1001548792 | 343 |
| 3 | iso_pu_bacteria | 2968138860 | 2968141998 | 345 |
| 4 | 3300005614 | Ga0068856_100256244 | Ga0068856_1002562442 | 346 |
| 5 | 3300048911 | Ga0496108_0037691 | Ga0496108_0037691_1836_2981 | 346 |
| 6 | 3300048912 | Ga0496109_0064239 | Ga0496109_0064239_590_1735 | 346 |
| 7 | 3300048915 | Ga0496112_0067311 | Ga0496112_0067311_1847_2992 | 346 |
| 8 | 3300006028 | Ga0070717_10087134 | Ga0070717_100871342 | 349 |
| 9 | 3300005549 | Ga0070704_100015353 | Ga0070704_1000153535 | 350 |
| 10 | 3300005983 | Ga0081540_1057249 | Ga0081540_10572492 | 350 |
| 11 | 3300009098 | Ga0105245_10021338 | Ga0105245_100213382 | 350 |
| 12 | 3300009553 | Ga0105249_10083786 | Ga0105249_100837862 | 350 |
| 13 | 3300025927 | Ga0207687_10009475 | Ga0207687_100094752 | 350 |
| 14 | 3300025961 | Ga0207712_10074451 | Ga0207712_100744512 | 350 |
| 15 | 3300026089 | Ga0207648_10241539 | Ga0207648_102415392 | 350 |
| 16 | 3300048917 | Ga0496114_0188046 | Ga0496114_0188046_550_1695 | 353 |
| 17 | 3300005577 | Ga0068857_100045722 | Ga0068857_1000457223 | 357 |
| 18 | 3300006038 | Ga0075365_10008904 | Ga0075365_100089044 | 357 |
| 19 | 3300006051 | Ga0075364_10012652 | Ga0075364_100126523 | 357 |
| 20 | 3300006177 | Ga0075362_10013545 | Ga0075362_100135452 | 357 |
| 21 | 3300026116 | Ga0207674_10102181 | Ga0207674_101021813 | 357 |
| 22 | 3300050489 | nmdc:mga03683_34974_c1 | nmdc:mga03683_34974_c1_819_1955 | 357 |
| 23 | 3300050491 | nmdc:mga00v17_37188_c1 | nmdc:mga00v17_37188_c1_1267_2403 | 357 |
| 24 | 3300053158 | Ga0500627_0048089 | Ga0500627_0048089_357_1493 | 357 |
| 25 | 3300049576 | Ga0501040_0074767 | Ga0501040_0074767_1103_2266 | 358 |
| 26 | iso_pu_bacteria | 2856342000 | 2856344074 | 358 |
| 27 | iso_pu_bacteria | 2869162929 | 2869168818 | 358 |
| 28 | iso_pu_bacteria | 2878788777 | 2878795796 | 358 |
| 29 | 3300048929 | Ga0496126_0136756 | Ga0496126_0136756_878_2014 | 359 |
| 30 | iso_pu_bacteria | 3004232784 | 3004236836 | 359 |
| 31 | 3300038443 | Ga0395901_0026131 | Ga0395901_0026131_4598_5701 | 360 |
| 32 | 3300037312 | Ga0395899_0072262 | Ga0395899_0072262_1101_2210 | 362 |
| 33 | 3300037418 | Ga0395900_0004432 | Ga0395900_0004432_11352_12461 | 362 |
| 34 | 3300037466 | Ga0395898_0023214 | Ga0395898_0023214_2500_3609 | 362 |
| 35 | 3300037471 | Ga0395905_0097704 | Ga0395905_0097704_1042_2151 | 362 |
| 36 | 3300038443 | Ga0395901_0015152 | Ga0395901_0015152_4870_5979 | 362 |
| 37 | 3300044694 | Ga0466963_0083025 | Ga0466963_0083025_230_1354 | 362 |
| 38 | 3300046462 | Ga0495651_0142133 | Ga0495651_0142133_65_1189 | 362 |
| 39 | 3300047322 | Ga0495680_0070324 | Ga0495680_0070324_498_1622 | 362 |
| 40 | 3300053084 | Ga0495595_0002518 | Ga0495595_0002518_841_1965 | 362 |
| 41 | iso_pu_bacteria | 2977898635 | 2977899188 | 362 |
| 42 | 3300005329 | Ga0070683_100107495 | Ga0070683_1001074952 | 363 |
| 43 | 3300005564 | Ga0070664_100069818 | Ga0070664_1000698182 | 363 |
| 44 | 3300014325 | Ga0163163_10148015 | Ga0163163_101480152 | 363 |
| 45 | 3300026078 | Ga0207702_10252283 | Ga0207702_102522832 | 363 |
| 46 | 3300026116 | Ga0207674_10068858 | Ga0207674_100688583 | 363 |
| 47 | 3300005518 | Ga0070699_100097748 | Ga0070699_1000977482 | 364 |
| 48 | 3300005545 | Ga0070695_100000003 | Ga0070695_10000000379 | 364 |
| 49 | 3300044694 | Ga0466963_0031488 | Ga0466963_0031488_323_1450 | 364 |
| 50 | 3300046516 | Ga0495628_0168059 | Ga0495628_0168059_517_1644 | 364 |
| 51 | 3300048905 | Ga0496102_0241470 | Ga0496102_0241470_515_1642 | 364 |
| 52 | 3300046517 | Ga0495630_0063399 | Ga0495630_0063399_1095_2279 | 365 |
| 53 | 3300005536 | Ga0070697_100281454 | Ga0070697_1002814542 | 366 |
| 54 | 3300006871 | Ga0075434_100000192 | Ga0075434_10000019215 | 366 |
| 55 | 3300007076 | Ga0075435_100009572 | Ga0075435_1000095725 | 366 |
| 56 | 3300009148 | Ga0105243_10337516 | Ga0105243_103375161 | 366 |
| 57 | 3300044684 | Ga0466966_0054480 | Ga0466966_0054480_1245_2375 | 366 |
| 58 | 3300044842 | Ga0466957_0002133 | Ga0466957_0002133_234_1364 | 366 |
| 59 | 3300045049 | Ga0466959_0010728 | Ga0466959_0010728_4929_6059 | 366 |
| 60 | 3300046528 | Ga0495642_0000573 | Ga0495642_0000573_11197_12327 | 366 |
| 61 | 3300046665 | Ga0495661_0000630 | Ga0495661_0000630_5479_6609 | 366 |
| 62 | 3300048927 | Ga0496124_0015795 | Ga0496124_0015795_1602_2732 | 366 |
| 63 | 3300050512 | nmdc:mga0n895_11372_c1 | nmdc:mga0n895_11372_c1_5225_6379 | 366 |
| 64 | 3300050515 | nmdc:mga0a205_118508_c1 | nmdc:mga0a205_118508_c1_850_2004 | 366 |
| 65 | 3300025261 | Ga0209233_1006853 | Ga0209233_10068532 | 367 |
| 66 | 3300035089 | Ga0373944_0006287 | Ga0373944_0006287_602_1780 | 367 |
| 67 | 3300035116 | Ga0373945_0015242 | Ga0373945_0015242_650_1828 | 367 |
| 68 | 3300035170 | Ga0373943_0003482 | Ga0373943_0003482_4492_5670 | 367 |
| 69 | 3300035171 | Ga0373946_0025040 | Ga0373946_0025040_1006_2184 | 367 |
| 70 | 3300035692 | Ga0373935_0081390 | Ga0373935_0081390_730_1908 | 367 |
| 71 | 3300046461 | Ga0495641_0022314 | Ga0495641_0022314_1679_2857 | 367 |
| 72 | 3300047321 | Ga0495676_0001350 | Ga0495676_0001350_1998_3176 | 367 |
| 73 | 3300048912 | Ga0496109_0023013 | Ga0496109_0023013_822_1946 | 367 |
| 74 | 3300002705 | JGI25156J39149_1005120 | JGI25156J39149_10051202 | 368 |
| 75 | 3300002741 | JGI25157J39369_1000272 | JGI25157J39369_100027214 | 368 |
| 76 | 3300005468 | Ga0070707_100356269 | Ga0070707_1003562691 | 368 |
| 77 | 3300005471 | Ga0070698_100023978 | Ga0070698_1000239783 | 368 |
| 78 | 3300006038 | Ga0075365_10098925 | Ga0075365_100989252 | 368 |
| 79 | 3300021388 | Ga0213875_10008409 | Ga0213875_100084096 | 368 |
| 80 | 3300025250 | Ga0209026_1000402 | Ga0209026_100040215 | 368 |
| 81 | 3300025256 | Ga0209759_1000557 | Ga0209759_100055715 | 368 |
| 82 | 3300032002 | Ga0307416_100302283 | Ga0307416_1003022831 | 368 |
| 83 | 3300032126 | Ga0307415_100211248 | Ga0307415_1002112481 | 368 |
| 84 | 3300037853 | Ga0436364_0519080 | Ga0436364_0519080_2260_3384 | 368 |
| 85 | 3300039437 | Ga0436365_0289188 | Ga0436365_0289188_5009_6133 | 368 |
| 86 | 3300005445 | Ga0070708_100148146 | Ga0070708_1001481461 | 369 |
| 87 | 3300005467 | Ga0070706_100014468 | Ga0070706_1000144687 | 369 |
| 88 | 3300005468 | Ga0070707_100001484 | Ga0070707_10000148416 | 369 |
| 89 | 3300005518 | Ga0070699_100061945 | Ga0070699_1000619452 | 369 |
| 90 | 3300005535 | Ga0070684_100054228 | Ga0070684_1000542282 | 369 |
| 91 | 3300005535 | Ga0070684_100112357 | Ga0070684_1001123572 | 369 |
| 92 | 3300005564 | Ga0070664_100119025 | Ga0070664_1001190252 | 369 |
| 93 | 3300005577 | Ga0068857_100000524 | Ga0068857_1000005249 | 369 |
| 94 | 3300025910 | Ga0207684_10012639 | Ga0207684_100126392 | 369 |
| 95 | 3300025922 | Ga0207646_10024418 | Ga0207646_100244184 | 369 |
| 96 | 3300025945 | Ga0207679_10178414 | Ga0207679_101784141 | 369 |
| 97 | 3300026116 | Ga0207674_10040996 | Ga0207674_100409962 | 369 |
| 98 | 3300026116 | Ga0207674_10153014 | Ga0207674_101530142 | 369 |
| 99 | 3300037312 | Ga0395899_0073297 | Ga0395899_0073297_278_1408 | 369 |
| 100 | 3300037418 | Ga0395900_0017738 | Ga0395900_0017738_5509_6639 | 369 |
| 101 | 3300037466 | Ga0395898_0009310 | Ga0395898_0009310_4850_5980 | 369 |
| 102 | 3300037471 | Ga0395905_0036506 | Ga0395905_0036506_3316_4446 | 369 |
| 103 | 3300005329 | Ga0070683_100001676 | Ga0070683_1000016767 | 370 |
| 104 | 3300005343 | Ga0070687_100144717 | Ga0070687_1001447171 | 370 |
| 105 | 3300005439 | Ga0070711_100136320 | Ga0070711_1001363202 | 370 |
| 106 | 3300005444 | Ga0070694_100130895 | Ga0070694_1001308952 | 370 |
| 107 | 3300005455 | Ga0070663_100031559 | Ga0070663_1000315592 | 370 |
| 108 | 3300005456 | Ga0070678_100025925 | Ga0070678_1000259253 | 370 |
| 109 | 3300005535 | Ga0070684_100001039 | Ga0070684_1000010399 | 370 |
| 110 | 3300005536 | Ga0070697_100078551 | Ga0070697_1000785512 | 370 |
| 111 | 3300005546 | Ga0070696_100203838 | Ga0070696_1002038382 | 370 |
| 112 | 3300005549 | Ga0070704_100028563 | Ga0070704_1000285632 | 370 |
| 113 | 3300005614 | Ga0068856_100071457 | Ga0068856_1000714572 | 370 |
| 114 | 3300006237 | Ga0097621_100068810 | Ga0097621_1000688102 | 370 |
| 115 | 3300006358 | Ga0068871_100162642 | Ga0068871_1001626422 | 370 |
| 116 | 3300009148 | Ga0105243_10175619 | Ga0105243_101756191 | 370 |
| 117 | 3300014969 | Ga0157376_10094832 | Ga0157376_100948322 | 370 |
| 118 | 3300025905 | Ga0207685_10001197 | Ga0207685_100011974 | 370 |
| 119 | 3300025915 | Ga0207693_10012058 | Ga0207693_100120583 | 370 |
| 120 | 3300025921 | Ga0207652_10113774 | Ga0207652_101137742 | 370 |
| 121 | 3300025939 | Ga0207665_10001782 | Ga0207665_100017827 | 370 |
| 122 | 3300026078 | Ga0207702_10069890 | Ga0207702_100698903 | 370 |
| 123 | 3300026121 | Ga0207683_10007060 | Ga0207683_100070604 | 370 |
| 124 | 3300037312 | Ga0395899_0077663 | Ga0395899_0077663_637_1803 | 370 |
| 125 | 3300037418 | Ga0395900_0005049 | Ga0395900_0005049_9120_10286 | 370 |
| 126 | 3300037418 | Ga0395900_0035123 | Ga0395900_0035123_212_1381 | 370 |
| 127 | 3300037418 | Ga0395900_0220243 | Ga0395900_0220243_300_1442 | 370 |
| 128 | 3300037466 | Ga0395898_0002779 | Ga0395898_0002779_5636_6802 | 370 |
| 129 | 3300037466 | Ga0395898_0078644 | Ga0395898_0078644_1458_2600 | 370 |
| 130 | 3300037466 | Ga0395898_0344902 | Ga0395898_0344902_33_1202 | 370 |
| 131 | 3300037471 | Ga0395905_0012010 | Ga0395905_0012010_2495_3661 | 370 |
| 132 | 3300038443 | Ga0395901_0009151 | Ga0395901_0009151_5070_6236 | 370 |
| 133 | 3300038443 | Ga0395901_0096094 | Ga0395901_0096094_971_2140 | 370 |
| 134 | 3300038443 | Ga0395901_0117119 | Ga0395901_0117119_859_2001 | 370 |
| 135 | 3300006178 | Ga0075367_10090318 | Ga0075367_100903182 | 371 |
| 136 | 3300046461 | Ga0495641_0047513 | Ga0495641_0047513_40_1212 | 371 |
| 137 | 3300046474 | Ga0495605_0043382 | Ga0495605_0043382_120_1301 | 371 |
| 138 | 3300046615 | Ga0495656_0029635 | Ga0495656_0029635_23_1198 | 371 |
| 139 | 3300038741 | Ga0400488_04941 | Ga0400488_04941_391_1512 | 372 |
| 140 | 3300005366 | Ga0070659_100074752 | Ga0070659_1000747522 | 373 |
| 141 | 3300009098 | Ga0105245_10127187 | Ga0105245_101271872 | 373 |
| 142 | 3300014745 | Ga0157377_10073219 | Ga0157377_100732192 | 373 |
| 143 | 3300025932 | Ga0207690_10045535 | Ga0207690_100455352 | 373 |
| 144 | 3300031995 | Ga0307409_100305709 | Ga0307409_1003057092 | 373 |
| 145 | 3300005458 | Ga0070681_10079169 | Ga0070681_100791692 | 374 |
| 146 | 3300025926 | Ga0207659_10124703 | Ga0207659_101247031 | 374 |
| 147 | 3300044656 | Ga0466969_0026365 | Ga0466969_0026365_1680_2834 | 374 |
| 148 | 3300044684 | Ga0466966_0062717 | Ga0466966_0062717_1046_2200 | 374 |
| 149 | 3300044694 | Ga0466963_0012337 | Ga0466963_0012337_3967_5121 | 374 |
| 150 | 3300044719 | Ga0466971_0053516 | Ga0466971_0053516_85_1239 | 374 |
| 151 | 3300044842 | Ga0466957_0059128 | Ga0466957_0059128_817_1971 | 374 |
| 152 | 3300045049 | Ga0466959_0036709 | Ga0466959_0036709_1882_3036 | 374 |
| 153 | 3300045836 | Ga0466958_0125143 | Ga0466958_0125143_372_1526 | 374 |
| 154 | iso_pu_bacteria | 2597489875 | 2597813978 | 374 |
| 155 | iso_pu_bacteria | 2756170246 | 2756676694 | 374 |
| 156 | iso_pu_bacteria | 2844002411 | 2844004552 | 374 |
| 157 | iso_pu_bacteria | 2856364286 | 2856367685 | 374 |
| 158 | iso_pu_bacteria | 2869285874 | 2869289165 | 374 |
| 159 | iso_pu_bacteria | 2871429161 | 2871432249 | 374 |
| 160 | iso_pu_bacteria | 2871466892 | 2871470424 | 374 |
| 161 | iso_pu_bacteria | 2874146452 | 2874152033 | 374 |
| 162 | iso_pu_bacteria | 2874155637 | 2874158719 | 374 |
| 163 | iso_pu_bacteria | 2876413966 | 2876417223 | 374 |
| 164 | iso_pu_bacteria | 2878745973 | 2878749026 | 374 |
| 165 | iso_pu_bacteria | 2888343758 | 2888347586 | 374 |
| 166 | iso_pu_bacteria | 2903492973 | 2903500290 | 374 |
| 167 | iso_pu_bacteria | 2906308376 | 2906311320 | 374 |
| 168 | iso_pu_bacteria | 2906321335 | 2906324104 | 374 |
| 169 | iso_pu_bacteria | 2906378014 | 2906383895 | 374 |
| 170 | iso_pu_bacteria | 2937813078 | 2937816678 | 374 |
| 171 | iso_pu_bacteria | 2937836603 | 2937837715 | 374 |
| 172 | iso_pu_bacteria | 2958041894 | 2958055630 | 374 |
| 173 | iso_pu_bacteria | 2958064165 | 2958068377 | 374 |
| 174 | iso_pu_bacteria | 2958071322 | 2958077645 | 374 |
| 175 | iso_pu_bacteria | 2958130278 | 2958133506 | 374 |
| 176 | iso_pu_bacteria | 2958179912 | 2958183074 | 374 |
| 177 | iso_pu_bacteria | 2961077736 | 2961081049 | 374 |
| 178 | iso_pu_bacteria | 2977843712 | 2977847130 | 374 |
| 179 | iso_pu_bacteria | 2977986579 | 2977991150 | 374 |
| 180 | iso_pu_bacteria | 3004268573 | 3004271410 | 374 |
| 181 | iso_pu_bacteria | 8004387939 | 8004392066 | 374 |
| 182 | iso_pu_bacteria | 8004640170 | 8004644645 | 374 |
| 183 | iso_pu_bacteria | 8004714634 | 8004717644 | 374 |
| 184 | 3300038443 | Ga0395901_0088230 | Ga0395901_0088230_1511_2740 | 375 |
| 185 | iso_pu_bacteria | 2841734538 | 2841740151 | 375 |
| 186 | iso_pu_bacteria | 2871474448 | 2871479051 | 375 |
| 187 | iso_pu_bacteria | 2924754689 | 2924757418 | 375 |
| 188 | iso_pu_bacteria | 2970524798 | 2970530338 | 375 |
| 189 | iso_pu_bacteria | 2970540015 | 2970544313 | 375 |
| 190 | iso_pu_bacteria | 8004395343 | 8004401003 | 375 |
| 191 | iso_pu_bacteria | 8004633249 | 8004639036 | 375 |
| 192 | 3300005937 | Ga0081455_10022743 | Ga0081455_100227434 | 376 |
| 193 | 3300037418 | Ga0395900_0070704 | Ga0395900_0070704_1924_3057 | 377 |
| 194 | 3300037471 | Ga0395905_0186003 | Ga0395905_0186003_85_1218 | 377 |
| 195 | 3300038443 | Ga0395901_0336804 | Ga0395901_0336804_374_1507 | 377 |
| 196 | 3300059477 | Ga0587084_000705 | Ga0587084_000705_732_1871 | 377 |
| 197 | 3300059490 | Ga0587066_000451 | Ga0587066_000451_1333_2472 | 377 |
| 198 | 3300059505 | Ga0587083_0010480 | Ga0587083_0010480_169_1308 | 377 |
| 199 | 3300059506 | Ga0587085_000504 | Ga0587085_000504_956_2095 | 377 |
| 200 | 3300059507 | Ga0587086_001166 | Ga0587086_001166_149_1288 | 377 |
| 201 | 3300059508 | Ga0587088_001289 | Ga0587088_001289_572_1711 | 377 |
| 202 | 3300059511 | Ga0587091_002672 | Ga0587091_002672_851_1990 | 377 |
| 203 | 3300059626 | Ga0587115_001185 | Ga0587115_001185_573_1712 | 377 |
| 204 | 3300001979 | JGI24740J21852_10006416 | JGI24740J21852_100064163 | 378 |
| 205 | 3300003214 | JGI25165J46597_1000020 | JGI25165J46597_1000020135 | 378 |
| 206 | 3300005614 | Ga0068856_100125127 | Ga0068856_1001251272 | 378 |
| 207 | 3300005937 | Ga0081455_10064605 | Ga0081455_100646053 | 378 |
| 208 | 3300025261 | Ga0209233_1000047 | Ga0209233_1000047198 | 378 |
| 209 | 3300037471 | Ga0395905_0002562 | Ga0395905_0002562_1768_2904 | 378 |
| 210 | 3300038443 | Ga0395901_0003220 | Ga0395901_0003220_3622_4758 | 378 |
| 211 | 3300049822 | Ga0501035_0048878 | Ga0501035_0048878_1106_2242 | 378 |
| 212 | 3300050494 | nmdc:mga06z11_63056_c1 | nmdc:mga06z11_63056_c1_632_1768 | 378 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3nu7-assembly1.cif.gz_A | wbpe, an aminotransferase from pseudomonas aeruginosa involved in o-antigen assembly in complex with the cofactor pmp | 0.9438 | 11 | 363 |
| 8e75-assembly1.cif.gz_A | crystal structure of pcryo_0616, the aminotransferase required to synthesize udp-n-acetyl-3-amino-d-glucosaminuronic acid (udp-glcnac3na) | 0.9374 | 11 | 362 |
| 5u1z-assembly2.cif.gz_C | x-ray structure of the wlarg aminotransferase, apo form, from campylobacter jejune | 0.9353 | 13 | 365 |
| 5u24-assembly2.cif.gz_D | x-ray structure of the wlarg aminotransferase from campylobacter jejuni, k184a mutant in complex with tdp-fuc3n | 0.9339 | 13 | 364 |
| 3frk-assembly1.cif.gz_B | x-ray structure of qdtb from t. thermosaccharolyticum in complex with a plp:tdp-3-aminoquinovose aldimine | 0.9311 | 13 | 365 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q58466_2_255_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9736 | 1 | 244 | 3.40.640.10 |
| af_L0T6V0_4_199_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9404 | 1 | 190 | 3.40.640.10 |
| 4k2bA01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9383 | 11 | 244 | 3.40.640.10 |
| 3bn1B01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.933 | 1 | 244 | 3.40.640.10 |
| af_Q58466_2_255_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9322 | 1 | 244 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3S1HIL7-F1-model_v4 | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.9951 | 1 | 365 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-A0A509EMR1-F1-model_v4 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.87) | 0.9949 | 2 | 375 |
GO:0000271
GO:0030170 GO:0099620 |
| AF-A0A7X9I3L2-F1-model_v4 | Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.9873 | 9 | 117 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-A0A3S1HIL7-F1-model_v4 | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.987 | 1 | 365 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-A0A509EMR1-F1-model_v4 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.87) | 0.9844 | 2 | 375 |
GO:0000271
GO:0030170 GO:0099620 |
Predicted Structure (AlphaFold2)
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