F323052

General Info

Members Datasets Scaffolds Average Seq Length
212 155 424 400

Family's Representative Sequence

Representative Sequence 3300035120|Ga0373957_0048975|Ga0373957_0048975_65_1450
Length 461
Sequence LTGRKKSKVTEPGSTGGPSRRRRPVALGWSAGIIAAALIAAGLFVAAREPAIVTGVWANRLQIAAILIFAATYLVIALGKLPGFYLDRAGAALLGAALMVGCGVLPFDRAMGAIDFNTIALLLGMMIVVGNLRLSGFFRLVTNWVVTRTRHPLLLLAAVIVTSGFFSAFLVNDTVCLALTPLVLDLVVRLRRDPVPYLLAVAMASNVGSVATITGNPQNIMIGSFSAIPYTAFAAALTPVALIGLILTFGLVAVSHPAEFLRAGRLSGSPTPSHAYRPLMVKAVLVTIAMMAGFFAGQPPAKISLLAGAVLLVTRAVRSEKIYREIDWPLLLMFAGLFVVVAGFEHALLSPALLVEISHQHLDRMPVLALVTAILSNLVSNVPAVLVLKPFVAELPDPRRAWLIVAMSATLAGNLTILGSVANLIVVQRAARRGLAIVFWQYFRVGAPLTVLTIIVGLLWL

Samples

Sample ID Description Type Environment
1 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
63 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
64 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
94 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
97 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
98 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
102 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
103 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
104 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
105 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
106 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
107 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
108 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
109 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
110 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
111 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
113 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
114 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
120 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
121 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
122 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
123 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
126 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
127 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
131 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
132 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
133 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified
154 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
155 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.11
Metatranscriptomes 0
Isolates 1.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.94
Rhizosphere 96.7
Stem 0
Stem Tuber 0
Unclassified 9.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373957_0048975 3300035120 Bacteria 1612
2 Ga0070676_10015446 3300005328 Bacteria 4212
3 Ga0070676_10020280 3300005328 Bacteria 3709
4 Ga0070683_100102574 3300005329 Bacteria 2695
5 Ga0070670_100058591 3300005331 Bacteria 3306
6 Ga0068869_100000801 3300005334 Bacteria 17959
7 Ga0068869_100008642 3300005334 Bacteria 6579
8 Ga0070682_100000399 3300005337 Bacteria 29036
9 Ga0070660_100077710 3300005339 Bacteria 2601
10 Ga0070689_100026641 3300005340 Bacteria 4354
11 Ga0070661_100003614 3300005344 Bacteria 10646
12 Ga0070692_10000419 3300005345 Bacteria 12804
13 Ga0070669_100055533 3300005353 Bacteria 2902
14 Ga0070659_100009190 3300005366 Bacteria 7254
15 Ga0070713_100099902 3300005436 Unclassified 2511
16 Ga0070705_100000192 3300005440 Bacteria 35880
17 Ga0070694_100055113 3300005444 Bacteria 2696
18 Ga0070708_100038495 3300005445 Bacteria 4178
19 Ga0070708_100356047 3300005445 Unclassified 1379
20 Ga0070663_100131817 3300005455 Bacteria 1899
21 Ga0070662_100024599 3300005457 Bacteria 4151
22 Ga0070681_10004833 3300005458 Bacteria 12911
23 Ga0068867_100030605 3300005459 Bacteria 3882
24 Ga0070707_100017416 3300005468 Bacteria 6755
25 Ga0070707_100181100 3300005468 Unclassified 2054
26 Ga0070698_100028063 3300005471 Bacteria 5849
27 Ga0070699_100006106 3300005518 Bacteria 10541
28 Ga0070697_100013847 3300005536 Bacteria 6329
29 Ga0070697_100262716 3300005536 Unclassified 1478
30 Ga0068853_100008503 3300005539 Bacteria 8249
31 Ga0070672_100102528 3300005543 Bacteria 2323
32 Ga0070696_100003636 3300005546 Bacteria 10272
33 Ga0070693_100001036 3300005547 Bacteria 12405
34 Ga0070693_100041263 3300005547 Bacteria 2595
35 Ga0070665_100320357 3300005548 Unclassified 1554
36 Ga0070704_100046650 3300005549 Bacteria 3024
37 Ga0068855_100016383 3300005563 Bacteria 8910
38 Ga0068855_100051167 3300005563 Bacteria 4866
39 Ga0070664_100033552 3300005564 Bacteria 4300
40 Ga0068857_100043226 3300005577 Bacteria 3997
41 Ga0068856_100001132 3300005614 Bacteria 28142
42 Ga0070702_100005765 3300005615 Bacteria 5804
43 Ga0068859_100022224 3300005617 Bacteria 6359
44 Ga0068859_100245203 3300005617 Unclassified 1881
45 Ga0068864_100194943 3300005618 Bacteria 1858
46 Ga0068863_100173880 3300005841 Bacteria 2066
47 Ga0068863_100244134 3300005841 Bacteria 1734
48 Ga0068858_100103179 3300005842 Bacteria 2660
49 Ga0068860_100025803 3300005843 Bacteria 5668
50 Ga0068860_100085063 3300005843 Unclassified 3008
51 Ga0068862_100063151 3300005844 Bacteria 3187
52 Ga0081455_10065802 3300005937 Bacteria 3029
53 Ga0070717_10222196 3300006028 Bacteria 1660
54 Ga0070716_100005421 3300006173 Bacteria 6179
55 Ga0075433_10037519 3300006852 Bacteria 4181
56 Ga0075433_10108205 3300006852 Bacteria 2466
57 Ga0075434_100012492 3300006871 Bacteria 8054
58 Ga0075436_100000433 3300006914 Bacteria 26867
59 Ga0097620_100022224 3300006931 Bacteria 6359
60 Ga0097620_100245207 3300006931 Unclassified 1881
61 Ga0105240_10002858 3300009093 Bacteria 27294
62 Ga0105240_10030034 3300009093 Bacteria 7070
63 Ga0105240_10247359 3300009093 Bacteria 2064
64 Ga0114129_10067950 3300009147 Bacteria 4970
65 Ga0114129_10200379 3300009147 Bacteria 2704
66 Ga0105241_10022081 3300009174 Bacteria 4711
67 Ga0105241_10267958 3300009174 Bacteria 1454
68 Ga0105238_10070164 3300009551 Bacteria 3504
69 Ga0105249_10230371 3300009553 Unclassified 1827
70 Ga0105239_10132055 3300010375 Bacteria 2778
71 Ga0105239_10377031 3300010375 Bacteria 1603
72 Ga0157373_10000640 3300013100 Bacteria 27467
73 Ga0157370_10130474 3300013104 Bacteria 2344
74 Ga0157370_10224357 3300013104 Bacteria 1740
75 Ga0157378_10117760 3300013297 Bacteria 2444
76 Ga0157378_10340881 3300013297 Unclassified 1461
77 Ga0163162_10283314 3300013306 Unclassified 1789
78 Ga0157372_10000063 3300013307 Bacteria 119595
79 Ga0157372_10081441 3300013307 Unclassified 3664
80 Ga0163163_10068267 3300014325 Bacteria 3537
81 Ga0157377_10091488 3300014745 Bacteria 1797
82 Ga0213872_10026584 3300021361 Bacteria 2658
83 Ga0213871_10002270 3300021441 Bacteria 3507
84 Ga0207653_10002572 3300025885 Bacteria 5764
85 Ga0207688_10034221 3300025901 Bacteria 2813
86 Ga0207645_10003368 3300025907 Bacteria 12157
87 Ga0207645_10056938 3300025907 Bacteria 2496
88 Ga0207684_10050376 3300025910 Bacteria 3532
89 Ga0207684_10147797 3300025910 Bacteria 2021
90 Ga0207654_10158923 3300025911 Bacteria 1458
91 Ga0207707_10005697 3300025912 Bacteria 10901
92 Ga0207695_10000095 3300025913 Bacteria 265435
93 Ga0207695_10008426 3300025913 Bacteria 12912
94 Ga0207695_10067663 3300025913 Bacteria 3663
95 Ga0207660_10000572 3300025917 Bacteria 24759
96 Ga0207660_10112659 3300025917 Bacteria 2049
97 Ga0207662_10068153 3300025918 Bacteria 2148
98 Ga0207652_10001315 3300025921 Bacteria 22072
99 Ga0207646_10243571 3300025922 Unclassified 1624
100 Ga0207665_10002209 3300025939 Bacteria 13131
101 Ga0207665_10031862 3300025939 Bacteria 3490
102 Ga0207691_10129099 3300025940 Bacteria 2234
103 Ga0207689_10000711 3300025942 Bacteria 31848
104 Ga0207689_10015313 3300025942 Bacteria 6492
105 Ga0207661_10061997 3300025944 Bacteria 3024
106 Ga0207679_10000769 3300025945 Bacteria 20976
107 Ga0207667_10015472 3300025949 Bacteria 8664
108 Ga0207667_10065997 3300025949 Bacteria 3773
109 Ga0207667_10096396 3300025949 Bacteria 3053
110 Ga0207640_10023067 3300025981 Bacteria 3736
111 Ga0207703_10114977 3300026035 Bacteria 2302
112 Ga0207639_10003581 3300026041 Bacteria 10428
113 Ga0207678_10054955 3300026067 Bacteria 3429
114 Ga0207702_10002012 3300026078 Bacteria 19694
115 Ga0207702_10202132 3300026078 Bacteria 1842
116 Ga0207641_10114510 3300026088 Bacteria 2396
117 Ga0207648_10000508 3300026089 Bacteria 43455
118 Ga0207676_10072406 3300026095 Bacteria 2770
119 Ga0207674_10129145 3300026116 Bacteria 2492
120 Ga0207675_100008398 3300026118 Bacteria 9735
121 Ga0268265_10018342 3300028380 Bacteria 4847
122 Ga0268265_10057363 3300028380 Bacteria 2967
123 Ga0268264_10022774 3300028381 Bacteria 5112
124 Ga0268264_10063740 3300028381 Unclassified 3100
125 Ga0265337_1003957 3300028556 Bacteria 6272
126 Ga0265336_10018591 3300028666 Unclassified 2250
127 Ga0265338_10001852 3300028800 Bacteria 33211
128 Ga0265338_10002609 3300028800 Bacteria 26627
129 Ga0265338_10051355 3300028800 Bacteria 3713
130 Ga0265328_10012298 3300031239 Bacteria 3408
131 Ga0265325_10001580 3300031241 Bacteria 15872
132 Ga0265339_10000673 3300031249 Bacteria 26391
133 Ga0265331_10002524 3300031250 Bacteria 12334
134 Ga0265327_10004045 3300031251 Bacteria 13297
135 Ga0265313_10004455 3300031595 Bacteria 10751
136 Ga0265314_10000246 3300031711 Bacteria 79739
137 Ga0265314_10001153 3300031711 Bacteria 30543
138 Ga0265342_10004306 3300031712 Bacteria 11275
139 Ga0265342_10026124 3300031712 Unclassified 3664
140 Ga0373926_0020356 3300035083 Bacteria 2292
141 Ga0373934_0020622 3300035086 Bacteria 2534
142 Ga0373951_0005144 3300035091 Bacteria 3056
143 Ga0373945_0019231 3300035116 Bacteria 2331
144 Ga0373953_0000509 3300035117 Bacteria 10806
145 Ga0373956_0030106 3300035119 Bacteria 2371
146 Ga0373956_0040618 3300035119 Bacteria 2064
147 Ga0373956_0085913 3300035119 Unclassified 1447
148 Ga0373955_0018575 3300035172 Bacteria 3461
149 Ga0373935_0020623 3300035692 Bacteria 4029
150 Ga0373927_0003256 3300035695 Bacteria 11681
151 Ga0373927_0092037 3300035695 Bacteria 1970
152 Ga0373933_0066961 3300035724 Bacteria 2178
153 Ga0373947_0047095 3300035725 Bacteria 2583
154 Ga0373937_0002735 3300036401 Bacteria 14713
155 Ga0373937_0011631 3300036401 Bacteria 7726
156 Ga0373937_0042510 3300036401 Bacteria 4147
157 Ga0373937_0051762 3300036401 Bacteria 3763
158 Ga0373937_0143881 3300036401 Bacteria 2231
159 Ga0373925_0005579 3300037068 Bacteria 9368
160 Ga0436364_0526697 3300037853 Bacteria 2801
161 Ga0436365_1564110 3300039437 Bacteria 3312
162 Ga0436360_0857133 3300039438 Bacteria 3776
163 Ga0436362_0927393 3300039453 Bacteria 3974
164 Ga0436362_1116880 3300039453 Bacteria 4174
165 Ga0439448_0000412 3300042005 Bacteria 9792
166 Ga0439459_0001505 3300042438 Bacteria 3453
167 Ga0451577_0001371 3300042876 Bacteria 32732
168 Ga0451577_0015780 3300042876 Bacteria 7011
169 Ga0451577_0175424 3300042876 Unclassified 1932
170 Ga0451577_0242724 3300042876 Bacteria 1630
171 Ga0453684_0000238 3300044712 Bacteria 236003
172 Ga0453684_0004654 3300044712 Bacteria 28509
173 Ga0453684_0007891 3300044712 Bacteria 19328
174 Ga0453684_0018160 3300044712 Bacteria 10825
175 Ga0453684_0060794 3300044712 Bacteria 4854
176 Ga0453684_0183062 3300044712 Bacteria 2458
177 Ga0495641_0010527 3300046461 Bacteria 5354
178 Ga0495580_0005974 3300046472 Bacteria 9975
179 Ga0495580_0045149 3300046472 Bacteria 3131
180 Ga0495618_0005210 3300046514 Bacteria 7944
181 Ga0495628_0218745 3300046516 Bacteria 1431
182 Ga0495630_0023906 3300046517 Bacteria 4518
183 Ga0495630_0135647 3300046517 Unclassified 1870
184 Ga0495586_0001433 3300046535 Bacteria 13198
185 Ga0495645_0150307 3300046543 Bacteria 1619
186 Ga0495667_0116883 3300046559 Bacteria 1723
187 Ga0495634_0000889 3300046642 Bacteria 28667
188 Ga0495635_0077316 3300046663 Bacteria 2280
189 Ga0495599_0118529 3300046678 Unclassified 1646
190 Ga0495674_0105972 3300047319 Bacteria 2388
191 Ga0495680_0008829 3300047322 Bacteria 9123
192 Ga0496102_0048349 3300048905 Bacteria 3868
193 Ga0496106_0119150 3300048909 Bacteria 2062
194 Ga0496126_0137863 3300048929 Bacteria 2103
195 Ga0501031_0002034 3300049568 Bacteria 12737
196 Ga0501032_0007591 3300049569 Bacteria 7917
197 Ga0501033_0027228 3300049570 Bacteria 4299
198 Ga0501038_0101975 3300049574 Bacteria 2389
199 Ga0501047_0077646 3300049581 Bacteria 3194
200 Ga0501035_0012513 3300049822 Bacteria 7838
201 Ga0501035_0068091 3300049822 Bacteria 3157
202 Ga0501035_0187629 3300049822 Bacteria 1779
203 Ga0501044_0000014 3300049823 Bacteria 244619
204 nmdc:mga05p37_223405_c1 3300050507 Bacteria 2272
205 nmdc:mga0rr50_13376_c1 3300050513 Bacteria 5342
206 nmdc:mga08x19_200272_c1 3300050514 Bacteria 1368
207 Ga0495601_0006406 3300053077 Bacteria 6883
208 Ga0501084_0042663 3300054114 Bacteria 3794
209 2673165792 2671180531 Bacteria 9045424
210 2673165890 2671180531 Bacteria 9045424
211 2889419842 2889415604 Bacteria 8048700
212 2920111463 2920107658 Bacteria 10042636
213 Ga0373957_0048975
214 Ga0070676_10015446
215 Ga0070676_10020280
216 Ga0070683_100102574
217 Ga0070670_100058591
218 Ga0068869_100000801
219 Ga0068869_100008642
220 Ga0070682_100000399
221 Ga0070660_100077710
222 Ga0070689_100026641
223 Ga0070661_100003614
224 Ga0070692_10000419
225 Ga0070669_100055533
226 Ga0070659_100009190
227 Ga0070713_100099902
228 Ga0070705_100000192
229 Ga0070694_100055113
230 Ga0070708_100038495
231 Ga0070708_100356047
232 Ga0070663_100131817
233 Ga0070662_100024599
234 Ga0070681_10004833
235 Ga0068867_100030605
236 Ga0070707_100017416
237 Ga0070707_100181100
238 Ga0070698_100028063
239 Ga0070699_100006106
240 Ga0070697_100013847
241 Ga0070697_100262716
242 Ga0068853_100008503
243 Ga0070672_100102528
244 Ga0070696_100003636
245 Ga0070693_100001036
246 Ga0070693_100041263
247 Ga0070665_100320357
248 Ga0070704_100046650
249 Ga0068855_100016383
250 Ga0068855_100051167
251 Ga0070664_100033552
252 Ga0068857_100043226
253 Ga0068856_100001132
254 Ga0070702_100005765
255 Ga0068859_100022224
256 Ga0068859_100245203
257 Ga0068864_100194943
258 Ga0068863_100173880
259 Ga0068863_100244134
260 Ga0068858_100103179
261 Ga0068860_100025803
262 Ga0068860_100085063
263 Ga0068862_100063151
264 Ga0081455_10065802
265 Ga0070717_10222196
266 Ga0070716_100005421
267 Ga0075433_10037519
268 Ga0075433_10108205
269 Ga0075434_100012492
270 Ga0075436_100000433
271 Ga0097620_100022224
272 Ga0097620_100245207
273 Ga0105240_10002858
274 Ga0105240_10030034
275 Ga0105240_10247359
276 Ga0114129_10067950
277 Ga0114129_10200379
278 Ga0105241_10022081
279 Ga0105241_10267958
280 Ga0105238_10070164
281 Ga0105249_10230371
282 Ga0105239_10132055
283 Ga0105239_10377031
284 Ga0157373_10000640
285 Ga0157370_10130474
286 Ga0157370_10224357
287 Ga0157378_10117760
288 Ga0157378_10340881
289 Ga0163162_10283314
290 Ga0157372_10000063
291 Ga0157372_10081441
292 Ga0163163_10068267
293 Ga0157377_10091488
294 Ga0213872_10026584
295 Ga0213871_10002270
296 Ga0207653_10002572
297 Ga0207688_10034221
298 Ga0207645_10003368
299 Ga0207645_10056938
300 Ga0207684_10050376
301 Ga0207684_10147797
302 Ga0207654_10158923
303 Ga0207707_10005697
304 Ga0207695_10000095
305 Ga0207695_10008426
306 Ga0207695_10067663
307 Ga0207660_10000572
308 Ga0207660_10112659
309 Ga0207662_10068153
310 Ga0207652_10001315
311 Ga0207646_10243571
312 Ga0207665_10002209
313 Ga0207665_10031862
314 Ga0207691_10129099
315 Ga0207689_10000711
316 Ga0207689_10015313
317 Ga0207661_10061997
318 Ga0207679_10000769
319 Ga0207667_10015472
320 Ga0207667_10065997
321 Ga0207667_10096396
322 Ga0207640_10023067
323 Ga0207703_10114977
324 Ga0207639_10003581
325 Ga0207678_10054955
326 Ga0207702_10002012
327 Ga0207702_10202132
328 Ga0207641_10114510
329 Ga0207648_10000508
330 Ga0207676_10072406
331 Ga0207674_10129145
332 Ga0207675_100008398
333 Ga0268265_10018342
334 Ga0268265_10057363
335 Ga0268264_10022774
336 Ga0268264_10063740
337 Ga0265337_1003957
338 Ga0265336_10018591
339 Ga0265338_10001852
340 Ga0265338_10002609
341 Ga0265338_10051355
342 Ga0265328_10012298
343 Ga0265325_10001580
344 Ga0265339_10000673
345 Ga0265331_10002524
346 Ga0265327_10004045
347 Ga0265313_10004455
348 Ga0265314_10000246
349 Ga0265314_10001153
350 Ga0265342_10004306
351 Ga0265342_10026124
352 Ga0373926_0020356
353 Ga0373934_0020622
354 Ga0373951_0005144
355 Ga0373945_0019231
356 Ga0373953_0000509
357 Ga0373956_0030106
358 Ga0373956_0040618
359 Ga0373956_0085913
360 Ga0373955_0018575
361 Ga0373935_0020623
362 Ga0373927_0003256
363 Ga0373927_0092037
364 Ga0373933_0066961
365 Ga0373947_0047095
366 Ga0373937_0002735
367 Ga0373937_0011631
368 Ga0373937_0042510
369 Ga0373937_0051762
370 Ga0373937_0143881
371 Ga0373925_0005579
372 Ga0436364_0526697
373 Ga0436365_1564110
374 Ga0436360_0857133
375 Ga0436362_0927393
376 Ga0436362_1116880
377 Ga0439448_0000412
378 Ga0439459_0001505
379 Ga0451577_0001371
380 Ga0451577_0015780
381 Ga0451577_0175424
382 Ga0451577_0242724
383 Ga0453684_0000238
384 Ga0453684_0004654
385 Ga0453684_0007891
386 Ga0453684_0018160
387 Ga0453684_0060794
388 Ga0453684_0183062
389 Ga0495641_0010527
390 Ga0495580_0005974
391 Ga0495580_0045149
392 Ga0495618_0005210
393 Ga0495628_0218745
394 Ga0495630_0023906
395 Ga0495630_0135647
396 Ga0495586_0001433
397 Ga0495645_0150307
398 Ga0495667_0116883
399 Ga0495634_0000889
400 Ga0495635_0077316
401 Ga0495599_0118529
402 Ga0495674_0105972
403 Ga0495680_0008829
404 Ga0496102_0048349
405 Ga0496106_0119150
406 Ga0496126_0137863
407 Ga0501031_0002034
408 Ga0501032_0007591
409 Ga0501033_0027228
410 Ga0501038_0101975
411 Ga0501047_0077646
412 Ga0501035_0012513
413 Ga0501035_0068091
414 Ga0501035_0187629
415 Ga0501044_0000014
416 nmdc:mga05p37_223405_c1
417 nmdc:mga0rr50_13376_c1
418 nmdc:mga08x19_200272_c1
419 Ga0495601_0006406
420 Ga0501084_0042663
421 2673165792
422 2673165890
423 2889419842
424 2920111463

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03600

CitMHS

Citrate transporter

66

399

0.89

PF02040

ArsB

Arsenical pump membrane protein

64

461

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7jsj-assembly1.cif.gz_A structure of the nact-pf2 complex 0.7305 7 387
6okz-assembly2.cif.gz_A structure of vcindy bound to fumarate 0.7187 7 389
6ol1-assembly1.cif.gz_B structure of vcindy in complex with succinate 0.7184 7 389
7jsj-assembly1.cif.gz_A structure of the nact-pf2 complex 0.7139 7 387
6okz-assembly2.cif.gz_A structure of vcindy bound to fumarate 0.7055 7 389
ID Description Score Start End Superfamily
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8343 9 388 1.20.1530.20
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8125 9 388 1.20.1530.20
af_O61894_655_834_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.3118 84 274 1.20.1640.10
af_B6SQ48_46_188_1.20.1260.100 Mainly Alpha;Up-down Bundle;Ferritin;TspO/MBR protein 0.2974 100 238 1.20.1260.100
af_B6SQ48_46_188_1.20.1260.100 Mainly Alpha;Up-down Bundle;Ferritin;TspO/MBR protein 0.2804 100 238 1.20.1260.100
ID Description Score Start End GO Terms
AF-A0A3S1E714-F1-model_v4 Anion transporter 0.9799 295 388 GO:0005886
GO:0055085
AF-A0A2M8CTL4-F1-model_v4 Citrate transporter-like domain-containing protein 0.9732 289 388 GO:0005886
AF-I6ZMM4-F1-model_v4 Citrate transporter 0.9606 5 389 GO:0005886
GO:0015105
AF-A0A530A230-F1-model_v4 Anion transporter 0.9596 279 388 GO:0005886
GO:0055085
AF-A0A2W6BMG3-F1-model_v4 Anion transporter 0.9593 7 387 GO:0005886
GO:0015105

Map