F321549

General Info

Members Datasets Scaffolds Average Seq Length
211 121 418 381

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10008123|Ga0114129_100081237
Length 415
Sequence MRTFNARHRNGFRGPDQIAANPIVAADHMIELLMVAERAASSDAKILITGESGVGKDIVARHVHDHSSRRAAEFVAVNCAGVTETLLESELFGHVKGSFTGAYRDKIGKLRLAHGGTLFLDEVAEMSLRMQALLLRFLENGEIQAVGSDAARATVDVRVIAATNRNLTDMVASGAFREDLLYRLRVIHLHVPPLRDRVADIRPLAMHFFARSGRLVTLTDEAWQALERYKWPGNVRELQNVVEQMTWLSASPDEPIGVDQVPAVVRSASQATGPMRERRRQVADELYQALVHGGYSFWQHIYPLFLNRDITRHDLRELVRHGLSVTRGSYRSVLELFSIPASDYKRFMNFLATHDCRVDYREFRTMKGGAPRARRSILNLLPPLDEPKTGSAASPQPDTRPSEAPRDDAADFPAL

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
87 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
88 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
89 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
92 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
93 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
94 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
97 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
104 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
105 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
106 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
107 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
108 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
109 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
111 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
112 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
113 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
114 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
115 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
116 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
117 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
118 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
119 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
120 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
121 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.9
Nodule 0
Rhizoplane 0.47
Rhizosphere 97.63
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10008123 3300009147 Bacteria 14958
2 Ga0065704_10021149 3300005289 Bacteria 1239
3 Ga0065707_10001043 3300005295 Bacteria 11083
4 Ga0065707_10086035 3300005295 Bacteria 5683
5 Ga0065707_10107483 3300005295 Bacteria 2551
6 Ga0070670_100281859 3300005331 Bacteria 1451
7 Ga0070666_10065191 3300005335 Bacteria 2471
8 Ga0070680_100129291 3300005336 Bacteria 2112
9 Ga0070680_100349627 3300005336 Bacteria 1257
10 Ga0068868_100195718 3300005338 Bacteria 1683
11 Ga0070689_100024839 3300005340 Bacteria 4498
12 Ga0070687_100002299 3300005343 Bacteria 7100
13 Ga0070692_10048697 3300005345 Bacteria 2196
14 Ga0070668_100050416 3300005347 Bacteria 3205
15 Ga0070669_100001170 3300005353 Bacteria 19164
16 Ga0070669_100007875 3300005353 Bacteria 7617
17 Ga0070669_100009936 3300005353 Bacteria 6772
18 Ga0070675_100000169 3300005354 Bacteria 40417
19 Ga0070675_100003026 3300005354 Bacteria 12686
20 Ga0070675_100067349 3300005354 Bacteria 2963
21 Ga0070673_100044242 3300005364 Bacteria 3447
22 Ga0070688_100015716 3300005365 Bacteria 4313
23 Ga0070659_100244198 3300005366 Bacteria 1487
24 Ga0070701_10032382 3300005438 Bacteria 2602
25 Ga0070705_100054137 3300005440 Bacteria 2352
26 Ga0070700_100056009 3300005441 Bacteria 2470
27 Ga0068867_100000921 3300005459 Bacteria 20006
28 Ga0070706_100361816 3300005467 Bacteria 1352
29 Ga0070698_100016315 3300005471 Bacteria 7841
30 Ga0070698_100439259 3300005471 Bacteria 1240
31 Ga0070699_100037421 3300005518 Bacteria 4199
32 Ga0070684_100073038 3300005535 Bacteria 3022
33 Ga0070697_100159046 3300005536 Bacteria 1908
34 Ga0070672_100067868 3300005543 Bacteria 2827
35 Ga0070704_100001396 3300005549 Bacteria 12852
36 Ga0070664_100050548 3300005564 Bacteria 3518
37 Ga0070664_100248622 3300005564 Bacteria 1598
38 Ga0068859_100000798 3300005617 Bacteria 31967
39 Ga0068859_100008233 3300005617 Bacteria 10577
40 Ga0068864_100137543 3300005618 Bacteria 2201
41 Ga0068861_100021513 3300005719 Bacteria 4636
42 Ga0068863_100008934 3300005841 Bacteria 9783
43 Ga0068858_100028696 3300005842 Bacteria 5168
44 Ga0068860_100031926 3300005843 Bacteria 5062
45 Ga0068862_100002404 3300005844 Bacteria 16649
46 Ga0068862_100024032 3300005844 Bacteria 5109
47 Ga0081455_10024546 3300005937 Bacteria 5580
48 Ga0075367_10023493 3300006178 Bacteria 3469
49 Ga0075367_10051057 3300006178 Bacteria 2443
50 Ga0075367_10086770 3300006178 Bacteria 1900
51 Ga0097621_100159631 3300006237 Bacteria 1937
52 Ga0075428_100002801 3300006844 Bacteria 18979
53 Ga0075428_100005916 3300006844 Bacteria 13595
54 Ga0075428_100017206 3300006844 Bacteria 7989
55 Ga0075428_100025185 3300006844 Bacteria 6583
56 Ga0075428_100065991 3300006844 Bacteria 3963
57 Ga0075428_100078272 3300006844 Bacteria 3609
58 Ga0075430_100004352 3300006846 Bacteria 11960
59 Ga0075430_100016867 3300006846 Bacteria 6221
60 Ga0075430_100080672 3300006846 Bacteria 2725
61 Ga0075430_100133485 3300006846 Bacteria 2069
62 Ga0075431_100018663 3300006847 Bacteria 7066
63 Ga0075431_100025239 3300006847 Bacteria 6093
64 Ga0075431_100162685 3300006847 Bacteria 2295
65 Ga0075433_10000791 3300006852 Bacteria 21898
66 Ga0075433_10030361 3300006852 Bacteria 4611
67 Ga0075433_10231145 3300006852 Bacteria 1642
68 Ga0075434_100000372 3300006871 Bacteria 32615
69 Ga0075434_100158287 3300006871 Bacteria 2285
70 Ga0075429_100001341 3300006880 Bacteria 20116
71 Ga0075429_100263667 3300006880 Bacteria 1509
72 Ga0097620_100000798 3300006931 Bacteria 31967
73 Ga0097620_100008233 3300006931 Bacteria 10577
74 Ga0097620_100184642 3300006931 Bacteria 2169
75 Ga0075435_100099526 3300007076 Bacteria 2408
76 Ga0111539_10001078 3300009094 Bacteria 36028
77 Ga0111539_10004807 3300009094 Bacteria 17620
78 Ga0111539_10013544 3300009094 Bacteria 10194
79 Ga0111539_10025198 3300009094 Bacteria 7291
80 Ga0111539_10046780 3300009094 Bacteria 5174
81 Ga0111539_10249050 3300009094 Bacteria 2069
82 Ga0111539_10291560 3300009094 Bacteria 1899
83 Ga0114129_10002103 3300009147 Bacteria 27407
84 Ga0114129_10002828 3300009147 Bacteria 24231
85 Ga0114129_10012444 3300009147 Bacteria 12112
86 Ga0114129_10013850 3300009147 Bacteria 11489
87 Ga0114129_10105570 3300009147 Bacteria 3893
88 Ga0114129_10189990 3300009147 Bacteria 2790
89 Ga0114129_10227373 3300009147 Bacteria 2514
90 Ga0114129_10455665 3300009147 Bacteria 1677
91 Ga0105243_10083013 3300009148 Bacteria 2620
92 Ga0105248_10113222 3300009177 Bacteria 3060
93 Ga0105249_10001317 3300009553 Bacteria 21729
94 Ga0105249_10001862 3300009553 Bacteria 18318
95 Ga0105249_10115861 3300009553 Bacteria 2539
96 Ga0157374_10113071 3300013296 Bacteria 2613
97 Ga0157378_10058127 3300013297 Bacteria 3449
98 Ga0157375_10001042 3300013308 Bacteria 23951
99 Ga0157375_10147805 3300013308 Bacteria 2482
100 Ga0157380_10386442 3300014326 Bacteria 1323
101 Ga0157377_10104523 3300014745 Bacteria 1693
102 Ga0157376_10016599 3300014969 Bacteria 5595
103 Ga0207645_10014596 3300025907 Bacteria 5252
104 Ga0207645_10113564 3300025907 Bacteria 1755
105 Ga0207643_10002431 3300025908 Bacteria 10072
106 Ga0207643_10002707 3300025908 Bacteria 9579
107 Ga0207662_10002739 3300025918 Bacteria 8893
108 Ga0207662_10017235 3300025918 Bacteria 4084
109 Ga0207681_10004237 3300025923 Bacteria 8856
110 Ga0207681_10015666 3300025923 Bacteria 4731
111 Ga0207681_10017835 3300025923 Bacteria 4463
112 Ga0207650_10249147 3300025925 Bacteria 1438
113 Ga0207659_10000109 3300025926 Bacteria 48710
114 Ga0207659_10000871 3300025926 Bacteria 17961
115 Ga0207659_10050876 3300025926 Bacteria 2945
116 Ga0207706_10069746 3300025933 Bacteria 3091
117 Ga0207709_10102930 3300025935 Bacteria 1891
118 Ga0207670_10119924 3300025936 Bacteria 1910
119 Ga0207691_10025759 3300025940 Bacteria 5520
120 Ga0207689_10262342 3300025942 Bacteria 1429
121 Ga0207679_10036266 3300025945 Bacteria 3496
122 Ga0207651_10026025 3300025960 Bacteria 3647
123 Ga0207651_10030138 3300025960 Bacteria 3450
124 Ga0207712_10007347 3300025961 Bacteria 6955
125 Ga0207712_10008705 3300025961 Bacteria 6418
126 Ga0207712_10220332 3300025961 Bacteria 1516
127 Ga0207668_10035800 3300025972 Bacteria 3309
128 Ga0207677_10194508 3300026023 Bacteria 1607
129 Ga0207703_10008081 3300026035 Bacteria 8316
130 Ga0207708_10045632 3300026075 Bacteria 3339
131 Ga0207641_10001079 3300026088 Bacteria 27452
132 Ga0207648_10000835 3300026089 Bacteria 34699
133 Ga0207676_10255519 3300026095 Bacteria 1579
134 Ga0207675_100006178 3300026118 Bacteria 11376
135 Ga0207428_10000569 3300027907 Bacteria 43728
136 Ga0207428_10000863 3300027907 Bacteria 34154
137 Ga0207428_10007795 3300027907 Bacteria 9748
138 Ga0207428_10043573 3300027907 Bacteria 3623
139 Ga0207428_10106873 3300027907 Bacteria 2157
140 Ga0268265_10001436 3300028380 Bacteria 20092
141 Ga0268265_10016287 3300028380 Bacteria 5103
142 Ga0268264_10417244 3300028381 Bacteria 1293
143 Ga0307409_100149423 3300031995 Bacteria 2026
144 Ga0307416_100286856 3300032002 Bacteria 1627
145 Ga0373947_0037545 3300035725 Bacteria 2875
146 Ga0373937_0019204 3300036401 Bacteria 6119
147 Ga0373937_0282783 3300036401 Bacteria 1567
148 Ga0439450_010122 3300042008 Bacteria 1810
149 Ga0450896_001040 3300042133 Bacteria 3253
150 Ga0439434_0022597 3300042435 Bacteria 1891
151 Ga0439464_0000995 3300042439 Bacteria 6444
152 Ga0495630_0186459 3300046517 Bacteria 1583
153 Ga0495621_0002897 3300046539 Bacteria 4675
154 Ga0495645_0022813 3300046543 Bacteria 4529
155 Ga0495633_0049631 3300046558 Bacteria 1980
156 Ga0495659_0003036 3300046664 Bacteria 5384
157 Ga0495659_0027130 3300046664 Bacteria 1973
158 Ga0495659_0063583 3300046664 Bacteria 1368
159 Ga0495613_0180580 3300046689 Bacteria 1495
160 Ga0495600_0093064 3300046809 Bacteria 1966
161 Ga0495684_0106239 3300047471 Bacteria 2121
162 Ga0496112_0218724 3300048915 Bacteria 1861
163 Ga0501036_0111392 3300049572 Bacteria 2313
164 Ga0501040_0161918 3300049576 Bacteria 1582
165 Ga0501041_0068447 3300049577 Bacteria 2176
166 Ga0501042_0002219 3300049578 Bacteria 11852
167 Ga0501068_0113611 3300049584 Bacteria 1685
168 Ga0501072_0004388 3300049588 Bacteria 10706
169 Ga0501075_0006826 3300049591 Bacteria 7880
170 Ga0501075_0039674 3300049591 Bacteria 3524
171 Ga0501076_0003146 3300049592 Bacteria 11510
172 Ga0501076_0018698 3300049592 Bacteria 5289
173 Ga0501079_0368176 3300049741 Bacteria 1126
174 Ga0501081_0247567 3300049743 Bacteria 1300
175 Ga0501035_0393983 3300049822 Bacteria 1153
176 Ga0501045_0164225 3300049824 Bacteria 1653
177 nmdc:mga05p37_15279_c1 3300050507 Bacteria 9223
178 nmdc:mga05p37_15426_c1 3300050507 Bacteria 9180
179 nmdc:mga05p37_156534_c1 3300050507 Bacteria 2784
180 nmdc:mga05p37_289173_c1 3300050507 Bacteria 1951
181 nmdc:mga05p37_3948_c1 3300050507 Bacteria 17372
182 nmdc:mga05p37_4126_c1 3300050507 Bacteria 16984
183 nmdc:mga09592_105841_c1 3300050508 Bacteria 2412
184 nmdc:mga09592_13173_c1 3300050508 Bacteria 6750
185 nmdc:mga09592_222024_c1 3300050508 Bacteria 1637
186 nmdc:mga09592_82531_c1 3300050508 Bacteria 2739
187 nmdc:mga0qj67_7723_c1 3300050509 Bacteria 7948
188 nmdc:mga06r32_124305_c1 3300050510 Bacteria 2547
189 nmdc:mga06r32_40789_c1 3300050510 Bacteria 4408
190 nmdc:mga06r32_6339_c1 3300050510 Bacteria 10626
191 nmdc:mga06r32_86847_c1 3300050510 Bacteria 3051
192 nmdc:mga08y16_112903_c1 3300050511 Bacteria 2829
193 nmdc:mga08y16_384556_c1 3300050511 Bacteria 1438
194 nmdc:mga08y16_55_c1 3300050511 Bacteria 102176
195 nmdc:mga08y16_660_c1 3300050511 Bacteria 32478
196 nmdc:mga08y16_78190_c1 3300050511 Bacteria 3449
197 nmdc:mga08y16_94752_c1 3300050511 Bacteria 3110
198 nmdc:mga0n895_170040_c1 3300050512 Bacteria 2211
199 nmdc:mga0n895_906_c1 3300050512 Bacteria 21376
200 nmdc:mga0rr50_154048_c1 3300050513 Bacteria 1860
201 nmdc:mga0rr50_22781_c1 3300050513 Bacteria 4305
202 nmdc:mga0a205_1089_c1 3300050515 Bacteria 22535
203 nmdc:mga0a205_122360_c1 3300050515 Bacteria 2502
204 nmdc:mga0a205_16155_c2 3300050515 Bacteria 4372
205 nmdc:mga0a205_190440_c1 3300050515 Bacteria 1944
206 nmdc:mga0a205_552_c1 3300050515 Bacteria 29661
207 Ga0495601_0089169 3300053077 Bacteria 1983
208 Ga0500568_0010043 3300053139 Bacteria 4460
209 Ga0530510_0094785 3300061734 Bacteria 2180
210 Ga0114129_10008123
211 Ga0065704_10021149
212 Ga0065707_10001043
213 Ga0065707_10086035
214 Ga0065707_10107483
215 Ga0070670_100281859
216 Ga0070666_10065191
217 Ga0070680_100129291
218 Ga0070680_100349627
219 Ga0068868_100195718
220 Ga0070689_100024839
221 Ga0070687_100002299
222 Ga0070692_10048697
223 Ga0070668_100050416
224 Ga0070669_100001170
225 Ga0070669_100007875
226 Ga0070669_100009936
227 Ga0070675_100000169
228 Ga0070675_100003026
229 Ga0070675_100067349
230 Ga0070673_100044242
231 Ga0070688_100015716
232 Ga0070659_100244198
233 Ga0070701_10032382
234 Ga0070705_100054137
235 Ga0070700_100056009
236 Ga0068867_100000921
237 Ga0070706_100361816
238 Ga0070698_100016315
239 Ga0070698_100439259
240 Ga0070699_100037421
241 Ga0070684_100073038
242 Ga0070697_100159046
243 Ga0070672_100067868
244 Ga0070704_100001396
245 Ga0070664_100050548
246 Ga0070664_100248622
247 Ga0068859_100000798
248 Ga0068859_100008233
249 Ga0068864_100137543
250 Ga0068861_100021513
251 Ga0068863_100008934
252 Ga0068858_100028696
253 Ga0068860_100031926
254 Ga0068862_100002404
255 Ga0068862_100024032
256 Ga0081455_10024546
257 Ga0075367_10023493
258 Ga0075367_10051057
259 Ga0075367_10086770
260 Ga0097621_100159631
261 Ga0075428_100002801
262 Ga0075428_100005916
263 Ga0075428_100017206
264 Ga0075428_100025185
265 Ga0075428_100065991
266 Ga0075428_100078272
267 Ga0075430_100004352
268 Ga0075430_100016867
269 Ga0075430_100080672
270 Ga0075430_100133485
271 Ga0075431_100018663
272 Ga0075431_100025239
273 Ga0075431_100162685
274 Ga0075433_10000791
275 Ga0075433_10030361
276 Ga0075433_10231145
277 Ga0075434_100000372
278 Ga0075434_100158287
279 Ga0075429_100001341
280 Ga0075429_100263667
281 Ga0097620_100000798
282 Ga0097620_100008233
283 Ga0097620_100184642
284 Ga0075435_100099526
285 Ga0111539_10001078
286 Ga0111539_10004807
287 Ga0111539_10013544
288 Ga0111539_10025198
289 Ga0111539_10046780
290 Ga0111539_10249050
291 Ga0111539_10291560
292 Ga0114129_10002103
293 Ga0114129_10002828
294 Ga0114129_10012444
295 Ga0114129_10013850
296 Ga0114129_10105570
297 Ga0114129_10189990
298 Ga0114129_10227373
299 Ga0114129_10455665
300 Ga0105243_10083013
301 Ga0105248_10113222
302 Ga0105249_10001317
303 Ga0105249_10001862
304 Ga0105249_10115861
305 Ga0157374_10113071
306 Ga0157378_10058127
307 Ga0157375_10001042
308 Ga0157375_10147805
309 Ga0157380_10386442
310 Ga0157377_10104523
311 Ga0157376_10016599
312 Ga0207645_10014596
313 Ga0207645_10113564
314 Ga0207643_10002431
315 Ga0207643_10002707
316 Ga0207662_10002739
317 Ga0207662_10017235
318 Ga0207681_10004237
319 Ga0207681_10015666
320 Ga0207681_10017835
321 Ga0207650_10249147
322 Ga0207659_10000109
323 Ga0207659_10000871
324 Ga0207659_10050876
325 Ga0207706_10069746
326 Ga0207709_10102930
327 Ga0207670_10119924
328 Ga0207691_10025759
329 Ga0207689_10262342
330 Ga0207679_10036266
331 Ga0207651_10026025
332 Ga0207651_10030138
333 Ga0207712_10007347
334 Ga0207712_10008705
335 Ga0207712_10220332
336 Ga0207668_10035800
337 Ga0207677_10194508
338 Ga0207703_10008081
339 Ga0207708_10045632
340 Ga0207641_10001079
341 Ga0207648_10000835
342 Ga0207676_10255519
343 Ga0207675_100006178
344 Ga0207428_10000569
345 Ga0207428_10000863
346 Ga0207428_10007795
347 Ga0207428_10043573
348 Ga0207428_10106873
349 Ga0268265_10001436
350 Ga0268265_10016287
351 Ga0268264_10417244
352 Ga0307409_100149423
353 Ga0307416_100286856
354 Ga0373947_0037545
355 Ga0373937_0019204
356 Ga0373937_0282783
357 Ga0439450_010122
358 Ga0450896_001040
359 Ga0439434_0022597
360 Ga0439464_0000995
361 Ga0495630_0186459
362 Ga0495621_0002897
363 Ga0495645_0022813
364 Ga0495633_0049631
365 Ga0495659_0003036
366 Ga0495659_0027130
367 Ga0495659_0063583
368 Ga0495613_0180580
369 Ga0495600_0093064
370 Ga0495684_0106239
371 Ga0496112_0218724
372 Ga0501036_0111392
373 Ga0501040_0161918
374 Ga0501041_0068447
375 Ga0501042_0002219
376 Ga0501068_0113611
377 Ga0501072_0004388
378 Ga0501075_0006826
379 Ga0501075_0039674
380 Ga0501076_0003146
381 Ga0501076_0018698
382 Ga0501079_0368176
383 Ga0501081_0247567
384 Ga0501035_0393983
385 Ga0501045_0164225
386 nmdc:mga05p37_15279_c1
387 nmdc:mga05p37_15426_c1
388 nmdc:mga05p37_156534_c1
389 nmdc:mga05p37_289173_c1
390 nmdc:mga05p37_3948_c1
391 nmdc:mga05p37_4126_c1
392 nmdc:mga09592_105841_c1
393 nmdc:mga09592_13173_c1
394 nmdc:mga09592_222024_c1
395 nmdc:mga09592_82531_c1
396 nmdc:mga0qj67_7723_c1
397 nmdc:mga06r32_124305_c1
398 nmdc:mga06r32_40789_c1
399 nmdc:mga06r32_6339_c1
400 nmdc:mga06r32_86847_c1
401 nmdc:mga08y16_112903_c1
402 nmdc:mga08y16_384556_c1
403 nmdc:mga08y16_55_c1
404 nmdc:mga08y16_660_c1
405 nmdc:mga08y16_78190_c1
406 nmdc:mga08y16_94752_c1
407 nmdc:mga0n895_170040_c1
408 nmdc:mga0n895_906_c1
409 nmdc:mga0rr50_154048_c1
410 nmdc:mga0rr50_22781_c1
411 nmdc:mga0a205_1089_c1
412 nmdc:mga0a205_122360_c1
413 nmdc:mga0a205_16155_c2
414 nmdc:mga0a205_190440_c1
415 nmdc:mga0a205_552_c1
416 Ga0495601_0089169
417 Ga0500568_0010043
418 Ga0530510_0094785

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

23

190

0.96

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

23

194

0.88

PF01078

Mg_chelatase

Magnesium chelatase, subunit ChlI

24

178

0.82

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

46

187

0.79

PF07728

AAA_5

AAA domain (dynein-related subfamily)

45

178

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ep2-assembly1.cif.gz_A quorum-sensing signal integrator luxo - catalytic domain in complex with azau inhibitor 0.9607 21 263
8p53-assembly1.cif.gz_D cryo-em structure of the c-di-gmp-free fleq-flen master regulator complex of p. aeruginosa 0.9592 22 267
4qhs-assembly1.cif.gz_F crystal structure of aaa+sigma 54 activator domain of the flagellar regulatory protein flrc of vibrio cholerae in nucleotide free state 0.9584 22 253
1ojl-assembly1.cif.gz_C crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding 0.9538 22 266
6lua-assembly1.cif.gz_G cis-mutant r349a of the central aaa+ domain of the flagellar regulatory protein flrc 0.951 22 267
ID Description Score Start End Superfamily
5m7nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9764 21 191 3.40.50.300
1ojlB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9721 22 192 3.40.50.300
5m7nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9646 21 191 3.40.50.300
2c98A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9546 22 194 3.40.50.300
2c98A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9491 22 194 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A496Z807-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9861 21 194 GO:0005524
GO:0006355
GO:0016887
AF-A0A7Y5G1B4-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9825 22 174 GO:0000160
GO:0005524
GO:0006355
GO:0016887
AF-A0A2N2HFV0-F1-model_v4 Fis family transcriptional regulator 0.9806 22 183 GO:0000160
GO:0005524
GO:0006355
GO:0016887
AF-A0A534SCY4-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9795 22 169 GO:0000160
GO:0005524
GO:0006355
GO:0016887
AF-A0A1E7IKM2-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9794 24 194 GO:0000160
GO:0005524
GO:0006355
GO:0016887

Map