F321472

General Info

Members Datasets Scaffolds Average Seq Length
211 149 210 278

Family's Representative Sequence

Representative Sequence 3300006173|Ga0070716_100241052|Ga0070716_1002410522
Length 299
Sequence MSDVRPGAEPAPRLAPLYPLLYEDLVRRALAEDLGRAGDLTSDAVVPAEARAEAVLVARVPGRLAGLPVALAAFRLLDPSLSLAAHAADGEDVAAGAVLATVRGAARSILSAERTALNFLGRLSGIATATRDLVAAVGARVVCTRKTTPGLRALEKYAVRAGGGANHRFGLDDAVLIKDNHRALAGGLRPAVERARRGAGHMVKIEVEVDSLAELDEALALGVDVVLLDNMPLDVLAEAVRRARGRALTEASGGIQPATAAAIAATGVDLLSVGWLTHSAPALDVALDVLPVLQGGVPR

Samples

Sample ID Description Type Environment
1 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
69 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
70 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
73 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
76 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
77 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
78 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
79 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
80 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
81 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
82 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
83 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
84 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
85 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
86 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
87 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
89 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
90 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
99 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
100 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
101 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
102 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
103 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
104 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
105 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
110 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
111 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
112 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
115 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
116 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
120 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
125 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
131 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
134 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
135 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
139 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
140 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
141 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
142 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
143 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
144 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
145 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
146 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
147 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
148 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.63
Metatranscriptomes 1.9
Isolates 0.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.37
Nodule 0.47
Rhizoplane 0.95
Rhizosphere 91.47
Stem 0
Stem Tuber 0
Unclassified 4.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10034855 3300005327 Bacteria 4051
2 Ga0070680_100136158 3300005336 Bacteria 2058
3 Ga0070709_10000016 3300005434 Bacteria 145008
4 Ga0070714_100036915 3300005435 Bacteria 4102
5 Ga0070714_100471811 3300005435 Bacteria 1194
6 Ga0070713_100067171 3300005436 Bacteria 3018
7 Ga0070710_10118976 3300005437 Bacteria 1596
8 Ga0070681_10028066 3300005458 Bacteria 5658
9 Ga0070681_10036764 3300005458 Bacteria 4917
10 Ga0070679_100040361 3300005530 Bacteria 4643
11 Ga0070679_100205725 3300005530 Bacteria 1933
12 Ga0068853_100178770 3300005539 Bacteria 1923
13 Ga0070686_100302231 3300005544 Bacteria 1187
14 Ga0070665_100075927 3300005548 Bacteria 3367
15 Ga0068857_100045705 3300005577 Bacteria 3885
16 Ga0068854_100000001 3300005578 Bacteria 608908
17 Ga0068856_100046421 3300005614 Bacteria 4278
18 Ga0068856_100201252 3300005614 Bacteria 2006
19 Ga0068859_100348932 3300005617 Bacteria 1575
20 Ga0068863_100153787 3300005841 Bacteria 2202
21 Ga0068860_100001188 3300005843 Bacteria 28462
22 Ga0068862_100001853 3300005844 Bacteria 19160
23 Ga0068862_100024108 3300005844 Bacteria 5103
24 Ga0070717_10099564 3300006028 Bacteria 2466
25 Ga0075364_10125082 3300006051 Bacteria 1723
26 Ga0070716_100241052 3300006173 Bacteria 1226
27 Ga0070712_100410828 3300006175 Bacteria 1120
28 Ga0097621_100345880 3300006237 Bacteria 1321
29 Ga0075431_100027354 3300006847 Bacteria 5850
30 Ga0075433_10384572 3300006852 Bacteria 1239
31 Ga0075434_100028295 3300006871 Bacteria 5505
32 Ga0075434_100607751 3300006871 Bacteria 1112
33 Ga0075436_100132178 3300006914 Bacteria 1750
34 Ga0097620_100348928 3300006931 Bacteria 1575
35 Ga0075435_100150981 3300007076 Bacteria 1953
36 Ga0099795_10013667 3300007788 Bacteria 2497
37 Ga0099795_10035668 3300007788 Bacteria 1740
38 Ga0105240_10548895 3300009093 Bacteria 1279
39 Ga0111539_10739222 3300009094 Bacteria 1145
40 Ga0114129_10239972 3300009147 Bacteria 2436
41 Ga0105248_10248147 3300009177 Bacteria 2004
42 Ga0105248_10563812 3300009177 Bacteria 1285
43 Ga0105249_10064916 3300009553 Bacteria 3357
44 Ga0157370_10004385 3300013104 Bacteria 16201
45 Ga0157369_10082007 3300013105 Bacteria 3451
46 Ga0157374_10109598 3300013296 Bacteria 2654
47 Ga0157378_10866007 3300013297 Bacteria 932
48 Ga0182008_10065630 3300014497 Bacteria 1785
49 Ga0157379_10265070 3300014968 Bacteria 1562
50 Ga0157379_10403717 3300014968 Bacteria 1256
51 Ga0157376_10193262 3300014969 Bacteria 1867
52 Ga0197907_10316231 3300020069 Bacteria 1592
53 Ga0206356_10964560 3300020070 Bacteria 4144
54 Ga0206356_11872525 3300020070 Bacteria 1527
55 Ga0213873_10011194 3300021358 Bacteria 1913
56 Ga0213876_10020740 3300021384 Bacteria 3475
57 Ga0207680_10068301 3300025903 Bacteria 2192
58 Ga0207680_10294706 3300025903 Bacteria 1130
59 Ga0207699_10000027 3300025906 Bacteria 152171
60 Ga0207707_10022034 3300025912 Bacteria 5569
61 Ga0207693_10021466 3300025915 Bacteria 5130
62 Ga0207693_10065351 3300025915 Bacteria 2849
63 Ga0207693_10389138 3300025915 Bacteria 1090
64 Ga0207660_10029080 3300025917 Bacteria 3787
65 Ga0207652_10050034 3300025921 Bacteria 3580
66 Ga0207700_10054537 3300025928 Bacteria 3001
67 Ga0207700_10093320 3300025928 Bacteria 2382
68 Ga0207700_10174663 3300025928 Bacteria 1795
69 Ga0207664_10082745 3300025929 Bacteria 2615
70 Ga0207644_10333276 3300025931 Bacteria 1229
71 Ga0207690_10130524 3300025932 Bacteria 1838
72 Ga0207665_10067337 3300025939 Bacteria 2438
73 Ga0207665_10109866 3300025939 Bacteria 1936
74 Ga0207640_10000003 3300025981 Bacteria 505282
75 Ga0207639_10339155 3300026041 Bacteria 1339
76 Ga0207702_10015614 3300026078 Bacteria 6286
77 Ga0207674_10042563 3300026116 Bacteria 4690
78 Ga0207675_100172016 3300026118 Bacteria 2071
79 Ga0268266_10046307 3300028379 Bacteria 3724
80 Ga0268265_10000426 3300028380 Bacteria 45123
81 Ga0268264_10030180 3300028381 Bacteria 4445
82 Ga0265338_10067091 3300028800 Bacteria 3101
83 Ga0265328_10067509 3300031239 Bacteria 1314
84 Ga0265320_10000448 3300031240 Bacteria 32305
85 Ga0265320_10075592 3300031240 Bacteria 1580
86 Ga0265325_10023550 3300031241 Bacteria 3359
87 Ga0265331_10002388 3300031250 Bacteria 12740
88 Ga0265313_10032918 3300031595 Bacteria 2640
89 Ga0307508_10106509 3300031616 Bacteria 2402
90 Ga0265314_10010447 3300031711 Bacteria 7744
91 Ga0316576_10002063 3300031727 Bacteria 11276
92 Ga0316576_10006842 3300031727 Bacteria 7127
93 Ga0316576_10012303 3300031727 Bacteria 5649
94 Ga0316576_10065921 3300031727 Bacteria 2662
95 Ga0316578_10017572 3300031728 Bacteria 3896
96 Ga0316577_10000375 3300031733 Bacteria 16894
97 Ga0316577_10042295 3300031733 Bacteria 2549
98 Ga0373926_0018410 3300035083 Bacteria 2402
99 Ga0373929_0000016 3300035085 Bacteria 128712
100 Ga0373934_0074176 3300035086 Bacteria 1363
101 Ga0373953_0113994 3300035117 Bacteria 1145
102 Ga0373954_0034766 3300035118 Bacteria 2335
103 Ga0373956_0044644 3300035119 Bacteria 1976
104 Ga0373943_0129530 3300035170 Bacteria 1349
105 Ga0373955_0028046 3300035172 Bacteria 2916
106 Ga0373955_0098481 3300035172 Bacteria 1675
107 Ga0373924_0061993 3300035410 Bacteria 1566
108 Ga0373924_0070157 3300035410 Bacteria 1477
109 Ga0373924_0136981 3300035410 Bacteria 1067
110 Ga0373935_0006654 3300035692 Bacteria 6905
111 Ga0373935_0027910 3300035692 Bacteria 3488
112 Ga0373927_0015096 3300035695 Bacteria 5107
113 Ga0373927_0268844 3300035695 Bacteria 1121
114 Ga0373933_0011239 3300035724 Bacteria 4928
115 Ga0373933_0088826 3300035724 Bacteria 1904
116 Ga0373933_0147277 3300035724 Bacteria 1489
117 Ga0373933_0189207 3300035724 Bacteria 1315
118 Ga0373947_0155798 3300035725 Bacteria 1474
119 Ga0373947_0174859 3300035725 Bacteria 1395
120 Ga0373937_0007434 3300036401 Bacteria 9480
121 Ga0373937_0064133 3300036401 Bacteria 3379
122 Ga0373937_0122716 3300036401 Bacteria 2422
123 Ga0373937_0128394 3300036401 Bacteria 2366
124 Ga0373937_0144062 3300036401 Bacteria 2230
125 Ga0373937_0179144 3300036401 Bacteria 1990
126 Ga0373937_0186500 3300036401 Bacteria 1948
127 Ga0373937_0600407 3300036401 Bacteria 1045
128 Ga0316584_0005244 3300036712 Bacteria 8672
129 Ga0373925_0062345 3300037068 Bacteria 2803
130 Ga0373925_0148054 3300037068 Bacteria 1841
131 Ga0395899_0239333 3300037312 Bacteria 1250
132 Ga0395898_0395719 3300037466 Bacteria 1317
133 Ga0436364_0082987 3300037853 Bacteria 54429
134 Ga0436364_0100938 3300037853 Bacteria 1370
135 Ga0436364_0858432 3300037853 Bacteria 2632
136 Ga0436365_0254225 3300039437 Bacteria 2633
137 Ga0436365_0549814 3300039437 Bacteria 1189
138 Ga0436365_1601355 3300039437 Bacteria 5838
139 Ga0436361_0204282 3300039447 Bacteria 1412
140 Ga0436361_0476184 3300039447 Bacteria 1370
141 Ga0436363_0341479 3300039450 Bacteria 1404
142 Ga0436362_0161615 3300039453 Bacteria 9239
143 Ga0451837_1549892 3300041494 Bacteria 982
144 Ga0495629_0433523 3300046459 Bacteria 891
145 Ga0495651_0064726 3300046462 Bacteria 2794
146 Ga0495651_0224259 3300046462 Bacteria 1299
147 Ga0495582_0179010 3300046473 Bacteria 1208
148 Ga0495664_0004064 3300046477 Bacteria 7976
149 Ga0495608_0012025 3300046511 Bacteria 6017
150 Ga0495608_0031184 3300046511 Bacteria 3605
151 Ga0495608_0170798 3300046511 Bacteria 1379
152 Ga0495628_0048737 3300046516 Bacteria 3357
153 Ga0495628_0124833 3300046516 Bacteria 1972
154 Ga0495630_0316601 3300046517 Bacteria 1193
155 Ga0495666_0172577 3300046526 Bacteria 1000
156 Ga0495652_0371147 3300046529 Bacteria 1020
157 Ga0495640_0316302 3300046533 Bacteria 967
158 Ga0495640_0320061 3300046533 Bacteria 961
159 Ga0495645_0022232 3300046543 Bacteria 4587
160 Ga0495645_0146294 3300046543 Bacteria 1646
161 Ga0495645_0243461 3300046543 Bacteria 1199
162 Ga0495667_0013936 3300046559 Bacteria 5429
163 Ga0495667_0016637 3300046559 Bacteria 4967
164 Ga0495667_0035561 3300046559 Bacteria 3328
165 Ga0495635_0026374 3300046663 Bacteria 4044
166 Ga0495635_0044439 3300046663 Bacteria 3065
167 Ga0495657_0125065 3300046675 Bacteria 1616
168 Ga0495599_0041349 3300046678 Bacteria 2895
169 Ga0495658_0220010 3300046683 Bacteria 1188
170 Ga0495658_0276389 3300046683 Bacteria 1059
171 Ga0495600_0046599 3300046809 Bacteria 2828
172 Ga0495581_0113737 3300047315 Bacteria 1574
173 Ga0495676_0339081 3300047321 Bacteria 1007
174 Ga0495680_0087379 3300047322 Bacteria 2345
175 Ga0495680_0241699 3300047322 Bacteria 1282
176 Ga0495675_0150282 3300047444 Bacteria 1439
177 Ga0495684_0028998 3300047471 Bacteria 4247
178 Ga0495602_0001916 3300048088 Bacteria 20870
179 Ga0495615_0003288 3300048090 Bacteria 2689
180 Ga0496114_0000013 3300048917 Bacteria 317623
181 Ga0496115_0167621 3300048918 Bacteria 1816
182 Ga0501034_0055001 3300049571 Bacteria 4006
183 Ga0501034_0509291 3300049571 Bacteria 1116
184 Ga0501048_0149322 3300049582 Bacteria 1653
185 Ga0501067_0010059 3300049583 Bacteria 5234
186 Ga0501068_0113059 3300049584 Bacteria 1689
187 Ga0501075_0000174 3300049591 Bacteria 33363
188 Ga0501077_0000363 3300049593 Bacteria 26991
189 nmdc:mga00v17_168380_c1 3300050491 Bacteria 1412
190 nmdc:mga06r32_78648_c1 3300050510 Bacteria 3206
191 nmdc:mga08y16_422332_c1 3300050511 Bacteria 1362
192 nmdc:mga0n895_31546_c1 3300050512 Bacteria 5075
193 nmdc:mga0n895_43770_c1 3300050512 Bacteria 4364
194 nmdc:mga0rr50_97783_c1 3300050513 Bacteria 2299
195 nmdc:mga08x19_318658_c1 3300050514 Bacteria 1082
196 nmdc:mga08x19_44796_c1 3300050514 Bacteria 2826
197 Ga0495601_0000427 3300053077 Bacteria 22061
198 Ga0495601_0097032 3300053077 Bacteria 1901
199 Ga0495601_0184347 3300053077 Bacteria 1364
200 Ga0495612_0031572 3300053078 Bacteria 2136
201 Ga0495655_0013337 3300053083 Bacteria 1698
202 Ga0495595_0035314 3300053084 Bacteria 2265
203 Ga0495595_0102265 3300053084 Bacteria 1384
204 Ga0495619_0008923 3300053085 Bacteria 6330
205 Ga0495619_0022746 3300053085 Bacteria 4014
206 Ga0500597_005599 3300053120 Bacteria 4073
207 Ga0500636_0072929 3300053177 Bacteria 1989
208 Ga0500601_001341 3300053737 Bacteria 2719
209 Ga0587073_0003574 3300059492 Bacteria 2145
210 Ga0501082_0000056 3300060353 Bacteria 79282

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025903 Ga0207680_10068301 Ga0207680_100683012 224
2 3300035117 Ga0373953_0113994 Ga0373953_0113994_49_882 234
3 3300036401 Ga0373937_0179144 Ga0373937_0179144_34_867 234
4 3300046533 Ga0495640_0316302 Ga0495640_0316302_36_869 234
5 3300046543 Ga0495645_0146294 Ga0495645_0146294_172_1005 234
6 3300046559 Ga0495667_0035561 Ga0495667_0035561_842_1675 234
7 3300046663 Ga0495635_0044439 Ga0495635_0044439_1878_2711 234
8 3300046809 Ga0495600_0046599 Ga0495600_0046599_1058_1891 234
9 3300053077 Ga0495601_0097032 Ga0495601_0097032_1014_1847 234
10 3300053084 Ga0495595_0102265 Ga0495595_0102265_97_930 234
11 3300053085 Ga0495619_0008923 Ga0495619_0008923_168_1001 234
12 3300053737 Ga0500601_001341 Ga0500601_001341_799_1650 253
13 3300009094 Ga0111539_10739222 Ga0111539_107392221 255
14 3300041494 Ga0451837_1549892 Ga0451837_1549892_77_919 257
15 3300005458 Ga0070681_10036764 Ga0070681_100367643 258
16 3300025903 Ga0207680_10294706 Ga0207680_102947061 258
17 3300049571 Ga0501034_0055001 Ga0501034_0055001_241_1113 258
18 3300049582 Ga0501048_0149322 Ga0501048_0149322_305_1123 259
19 3300031239 Ga0265328_10067509 Ga0265328_100675092 261
20 3300031616 Ga0307508_10106509 Ga0307508_101065092 261
21 3300031727 Ga0316576_10012303 Ga0316576_100123038 261
22 3300031728 Ga0316578_10017572 Ga0316578_100175723 261
23 3300031733 Ga0316577_10000375 Ga0316577_1000037516 261
24 3300036712 Ga0316584_0005244 Ga0316584_0005244_4308_5174 261
25 3300035692 Ga0373935_0006654 Ga0373935_0006654_4904_5755 263
26 3300048917 Ga0496114_0000013 Ga0496114_0000013_158154_159014 263
27 3300060353 Ga0501082_0000056 Ga0501082_0000056_53188_54030 264
28 3300005617 Ga0068859_100348932 Ga0068859_1003489321 265
29 3300006931 Ga0097620_100348928 Ga0097620_1003489281 265
30 3300006871 Ga0075434_100028295 Ga0075434_1000282954 267
31 3300035085 Ga0373929_0000016 Ga0373929_0000016_126735_127553 267
32 3300050512 nmdc:mga0n895_43770_c1 nmdc:mga0n895_43770_c1_2516_3382 267
33 3300035172 Ga0373955_0098481 Ga0373955_0098481_262_1083 268
34 3300035724 Ga0373933_0011239 Ga0373933_0011239_3451_4272 268
35 3300036401 Ga0373937_0007434 Ga0373937_0007434_5429_6250 268
36 3300013296 Ga0157374_10109598 Ga0157374_101095983 269
37 3300035118 Ga0373954_0034766 Ga0373954_0034766_1060_1884 269
38 3300035170 Ga0373943_0129530 Ga0373943_0129530_104_928 269
39 3300035172 Ga0373955_0028046 Ga0373955_0028046_1573_2397 269
40 3300035410 Ga0373924_0061993 Ga0373924_0061993_732_1556 269
41 3300035410 Ga0373924_0070157 Ga0373924_0070157_65_889 269
42 3300035695 Ga0373927_0268844 Ga0373927_0268844_164_988 269
43 3300035724 Ga0373933_0088826 Ga0373933_0088826_313_1137 269
44 3300035724 Ga0373933_0147277 Ga0373933_0147277_170_994 269
45 3300036401 Ga0373937_0064133 Ga0373937_0064133_2010_2834 269
46 3300036401 Ga0373937_0144062 Ga0373937_0144062_1341_2165 269
47 3300036401 Ga0373937_0186500 Ga0373937_0186500_460_1284 269
48 3300037068 Ga0373925_0148054 Ga0373925_0148054_391_1215 269
49 3300037853 Ga0436364_0858432 Ga0436364_0858432_27_851 269
50 3300046459 Ga0495629_0433523 Ga0495629_0433523_49_873 269
51 3300046462 Ga0495651_0064726 Ga0495651_0064726_1883_2707 269
52 3300046462 Ga0495651_0224259 Ga0495651_0224259_81_905 269
53 3300046477 Ga0495664_0004064 Ga0495664_0004064_6992_7816 269
54 3300046511 Ga0495608_0012025 Ga0495608_0012025_1631_2455 269
55 3300046511 Ga0495608_0031184 Ga0495608_0031184_2373_3197 269
56 3300046516 Ga0495628_0124833 Ga0495628_0124833_385_1209 269
57 3300046526 Ga0495666_0172577 Ga0495666_0172577_26_850 269
58 3300046529 Ga0495652_0371147 Ga0495652_0371147_30_854 269
59 3300046543 Ga0495645_0022232 Ga0495645_0022232_673_1497 269
60 3300046559 Ga0495667_0013936 Ga0495667_0013936_2671_3495 269
61 3300046559 Ga0495667_0016637 Ga0495667_0016637_1676_2500 269
62 3300046663 Ga0495635_0026374 Ga0495635_0026374_22_846 269
63 3300046675 Ga0495657_0125065 Ga0495657_0125065_634_1458 269
64 3300046678 Ga0495599_0041349 Ga0495599_0041349_1501_2325 269
65 3300047315 Ga0495581_0113737 Ga0495581_0113737_78_902 269
66 3300047322 Ga0495680_0087379 Ga0495680_0087379_71_895 269
67 3300047444 Ga0495675_0150282 Ga0495675_0150282_439_1263 269
68 3300047471 Ga0495684_0028998 Ga0495684_0028998_355_1179 269
69 3300048088 Ga0495602_0001916 Ga0495602_0001916_15125_15949 269
70 3300053077 Ga0495601_0000427 Ga0495601_0000427_9412_10236 269
71 3300053077 Ga0495601_0184347 Ga0495601_0184347_427_1251 269
72 3300053078 Ga0495612_0031572 Ga0495612_0031572_26_850 269
73 3300053084 Ga0495595_0035314 Ga0495595_0035314_374_1198 269
74 3300053085 Ga0495619_0022746 Ga0495619_0022746_2807_3631 269
75 iso_pu_bacteria 2842333319 2842333891 269
76 3300005434 Ga0070709_10000016 Ga0070709_1000001640 271
77 3300025906 Ga0207699_10000027 Ga0207699_1000002763 271
78 3300006175 Ga0070712_100410828 Ga0070712_1004108282 272
79 3300007788 Ga0099795_10013667 Ga0099795_100136673 272
80 3300009177 Ga0105248_10563812 Ga0105248_105638122 272
81 3300021358 Ga0213873_10011194 Ga0213873_100111942 272
82 3300021384 Ga0213876_10020740 Ga0213876_100207406 272
83 3300025931 Ga0207644_10333276 Ga0207644_103332761 272
84 3300037853 Ga0436364_0100938 Ga0436364_0100938_330_1163 272
85 3300039437 Ga0436365_1601355 Ga0436365_1601355_3468_4301 272
86 3300039453 Ga0436362_0161615 Ga0436362_0161615_5340_6173 272
87 3300050511 nmdc:mga08y16_422332_c1 nmdc:mga08y16_422332_c1_203_1036 272
88 3300005435 Ga0070714_100036915 Ga0070714_1000369154 273
89 3300005436 Ga0070713_100067171 Ga0070713_1000671713 273
90 3300005437 Ga0070710_10118976 Ga0070710_101189762 273
91 3300006028 Ga0070717_10099564 Ga0070717_100995641 273
92 3300025915 Ga0207693_10389138 Ga0207693_103891382 273
93 3300025928 Ga0207700_10054537 Ga0207700_100545373 273
94 3300025929 Ga0207664_10082745 Ga0207664_100827451 273
95 3300025939 Ga0207665_10067337 Ga0207665_100673373 273
96 3300037853 Ga0436364_0082987 Ga0436364_0082987_42472_43308 273
97 3300039447 Ga0436361_0204282 Ga0436361_0204282_220_1056 273
98 3300005844 Ga0068862_100024108 Ga0068862_1000241083 274
99 3300007788 Ga0099795_10035668 Ga0099795_100356682 274
100 3300009553 Ga0105249_10064916 Ga0105249_100649162 274
101 3300039437 Ga0436365_0254225 Ga0436365_0254225_1155_1994 274
102 3300005841 Ga0068863_100153787 Ga0068863_1001537872 275
103 3300005844 Ga0068862_100001853 Ga0068862_1000018533 275
104 3300009147 Ga0114129_10239972 Ga0114129_102399722 275
105 3300028380 Ga0268265_10000426 Ga0268265_1000042645 275
106 3300048090 Ga0495615_0003288 Ga0495615_0003288_685_1533 275
107 3300049583 Ga0501067_0010059 Ga0501067_0010059_437_1279 275
108 3300049584 Ga0501068_0113059 Ga0501068_0113059_45_887 275
109 3300049591 Ga0501075_0000174 Ga0501075_0000174_53_895 275
110 3300049593 Ga0501077_0000363 Ga0501077_0000363_7518_8360 275
111 3300005544 Ga0070686_100302231 Ga0070686_1003022312 276
112 3300006914 Ga0075436_100132178 Ga0075436_1001321782 276
113 3300031240 Ga0265320_10000448 Ga0265320_1000044828 276
114 3300031241 Ga0265325_10023550 Ga0265325_100235503 276
115 3300031595 Ga0265313_10032918 Ga0265313_100329182 276
116 3300037312 Ga0395899_0239333 Ga0395899_0239333_91_936 276
117 3300050514 nmdc:mga08x19_44796_c1 nmdc:mga08x19_44796_c1_1628_2488 276
118 3300053083 Ga0495655_0013337 Ga0495655_0013337_360_1217 276
119 3300005336 Ga0070680_100136158 Ga0070680_1001361582 277
120 3300005458 Ga0070681_10028066 Ga0070681_100280664 277
121 3300005530 Ga0070679_100040361 Ga0070679_1000403613 277
122 3300005577 Ga0068857_100045705 Ga0068857_1000457051 277
123 3300005614 Ga0068856_100201252 Ga0068856_1002012521 277
124 3300006051 Ga0075364_10125082 Ga0075364_101250822 277
125 3300006852 Ga0075433_10384572 Ga0075433_103845722 277
126 3300006871 Ga0075434_100607751 Ga0075434_1006077511 277
127 3300007076 Ga0075435_100150981 Ga0075435_1001509811 277
128 3300009093 Ga0105240_10548895 Ga0105240_105488952 277
129 3300013104 Ga0157370_10004385 Ga0157370_100043859 277
130 3300013105 Ga0157369_10082007 Ga0157369_100820073 277
131 3300014497 Ga0182008_10065630 Ga0182008_100656302 277
132 3300020070 Ga0206356_11872525 Ga0206356_118725252 277
133 3300025912 Ga0207707_10022034 Ga0207707_100220343 277
134 3300025917 Ga0207660_10029080 Ga0207660_100290803 277
135 3300025921 Ga0207652_10050034 Ga0207652_100500343 277
136 3300025928 Ga0207700_10093320 Ga0207700_100933204 277
137 3300026116 Ga0207674_10042563 Ga0207674_100425633 277
138 3300031240 Ga0265320_10075592 Ga0265320_100755921 277
139 3300031250 Ga0265331_10002388 Ga0265331_100023884 277
140 3300031733 Ga0316577_10042295 Ga0316577_100422952 277
141 3300035083 Ga0373926_0018410 Ga0373926_0018410_1334_2182 277
142 3300035086 Ga0373934_0074176 Ga0373934_0074176_82_930 277
143 3300035692 Ga0373935_0027910 Ga0373935_0027910_1375_2223 277
144 3300035695 Ga0373927_0015096 Ga0373927_0015096_1259_2107 277
145 3300035725 Ga0373947_0155798 Ga0373947_0155798_144_992 277
146 3300035725 Ga0373947_0174859 Ga0373947_0174859_69_917 277
147 3300036401 Ga0373937_0128394 Ga0373937_0128394_637_1485 277
148 3300036401 Ga0373937_0600407 Ga0373937_0600407_108_956 277
149 3300037068 Ga0373925_0062345 Ga0373925_0062345_1291_2139 277
150 3300046511 Ga0495608_0170798 Ga0495608_0170798_204_1052 277
151 3300046516 Ga0495628_0048737 Ga0495628_0048737_206_1054 277
152 3300046517 Ga0495630_0316601 Ga0495630_0316601_169_1017 277
153 3300046543 Ga0495645_0243461 Ga0495645_0243461_169_1017 277
154 3300046683 Ga0495658_0276389 Ga0495658_0276389_48_896 277
155 3300047321 Ga0495676_0339081 Ga0495676_0339081_39_887 277
156 3300047322 Ga0495680_0241699 Ga0495680_0241699_143_991 277
157 3300048918 Ga0496115_0167621 Ga0496115_0167621_284_1132 277
158 3300050491 nmdc:mga00v17_168380_c1 nmdc:mga00v17_168380_c1_238_1086 277
159 3300050512 nmdc:mga0n895_31546_c1 nmdc:mga0n895_31546_c1_2256_3122 277
160 3300050513 nmdc:mga0rr50_97783_c1 nmdc:mga0rr50_97783_c1_1166_2032 277
161 3300050514 nmdc:mga08x19_318658_c1 nmdc:mga08x19_318658_c1_26_892 277
162 3300059492 Ga0587073_0003574 Ga0587073_0003574_284_1132 277
163 3300005435 Ga0070714_100471811 Ga0070714_1004718111 278
164 3300005530 Ga0070679_100205725 Ga0070679_1002057252 278
165 3300005539 Ga0068853_100178770 Ga0068853_1001787702 278
166 3300005548 Ga0070665_100075927 Ga0070665_1000759274 278
167 3300005578 Ga0068854_100000001 Ga0068854_100000001351 278
168 3300005614 Ga0068856_100046421 Ga0068856_1000464214 278
169 3300005843 Ga0068860_100001188 Ga0068860_1000011882 278
170 3300009177 Ga0105248_10248147 Ga0105248_102481472 278
171 3300013297 Ga0157378_10866007 Ga0157378_108660071 278
172 3300014968 Ga0157379_10265070 Ga0157379_102650702 278
173 3300014968 Ga0157379_10403717 Ga0157379_104037172 278
174 3300014969 Ga0157376_10193262 Ga0157376_101932623 278
175 3300020069 Ga0197907_10316231 Ga0197907_103162312 278
176 3300020070 Ga0206356_10964560 Ga0206356_109645603 278
177 3300025915 Ga0207693_10021466 Ga0207693_100214663 278
178 3300025915 Ga0207693_10065351 Ga0207693_100653513 278
179 3300025928 Ga0207700_10174663 Ga0207700_101746632 278
180 3300025981 Ga0207640_10000003 Ga0207640_10000003123 278
181 3300026041 Ga0207639_10339155 Ga0207639_103391552 278
182 3300026078 Ga0207702_10015614 Ga0207702_100156143 278
183 3300028379 Ga0268266_10046307 Ga0268266_100463072 278
184 3300028800 Ga0265338_10067091 Ga0265338_100670912 278
185 3300031727 Ga0316576_10002063 Ga0316576_100020631 278
186 3300031727 Ga0316576_10006842 Ga0316576_100068424 278
187 3300035119 Ga0373956_0044644 Ga0373956_0044644_981_1832 278
188 3300035410 Ga0373924_0136981 Ga0373924_0136981_31_882 278
189 3300035724 Ga0373933_0189207 Ga0373933_0189207_270_1121 278
190 3300036401 Ga0373937_0122716 Ga0373937_0122716_679_1530 278
191 3300037466 Ga0395898_0395719 Ga0395898_0395719_140_1024 278
192 3300039437 Ga0436365_0549814 Ga0436365_0549814_123_974 278
193 3300039450 Ga0436363_0341479 Ga0436363_0341479_450_1301 278
194 3300046473 Ga0495582_0179010 Ga0495582_0179010_108_959 278
195 3300046533 Ga0495640_0320061 Ga0495640_0320061_95_946 278
196 3300046683 Ga0495658_0220010 Ga0495658_0220010_59_910 278
197 3300053120 Ga0500597_005599 Ga0500597_005599_2494_3345 278
198 3300053177 Ga0500636_0072929 Ga0500636_0072929_1115_1966 278
199 3300006237 Ga0097621_100345880 Ga0097621_1003458802 279
200 3300025932 Ga0207690_10130524 Ga0207690_101305242 279
201 3300026118 Ga0207675_100172016 Ga0207675_1001720162 279
202 3300028381 Ga0268264_10030180 Ga0268264_100301803 279
203 3300031727 Ga0316576_10065921 Ga0316576_100659213 279
204 3300006847 Ga0075431_100027354 Ga0075431_1000273544 280
205 3300031711 Ga0265314_10010447 Ga0265314_100104476 280
206 3300050510 nmdc:mga06r32_78648_c1 nmdc:mga06r32_78648_c1_1495_2367 280
207 3300049571 Ga0501034_0509291 Ga0501034_0509291_87_950 282
208 3300006173 Ga0070716_100241052 Ga0070716_1002410522 283
209 3300025939 Ga0207665_10109866 Ga0207665_101098663 283
210 3300005327 Ga0070658_10034855 Ga0070658_100348553 286
211 3300039447 Ga0436361_0476184 Ga0436361_0476184_111_1010 286

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02749

QRPTase_N

Quinolinate phosphoribosyl transferase, N-terminal domain

39

124

0.99

PF01729

QRPTase_C

Quinolinate phosphoribosyl transferase, C-terminal domain

126

288

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1x1o-assembly1.cif.gz_A crystal structure of project id tt0268 from thermus thermophilus hb8 0.9451 11 276
3l0g-assembly1.cif.gz_C crystal structure of nicotinate-nucleotide pyrophosphorylase from ehrlichia chaffeensis at 2.05a resolution 0.9366 12 277
3gnn-assembly1.cif.gz_A crystal structure of nicotinate-nucleotide pyrophosphorylase from burkholderi pseudomallei 0.926 9 277
1qpn-assembly1.cif.gz_A quinolinate phosphoribosyl transferase from mycobacterium tuberculosis in complex with ncnn 0.9227 9 275
5hul-assembly1.cif.gz_B crystal structure of nadc deletion mutant in cubic space group 0.9177 3 275
ID Description Score Start End Superfamily
3gnnA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9732 123 265 3.20.20.70
af_K7L259_6_100_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.96 193 261 3.20.20.70
3gnnA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9577 123 265 3.20.20.70
3l0gD02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9558 114 266 3.20.20.70
3tqvB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9473 120 264 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A7V9IY12-F1-model_v4 Nicotinate-nucleotide diphosphorylase (Carboxylating) 0.9809 195 277 GO:0004514
GO:0005737
GO:0009435
GO:0034213
AF-A0A439KMY1-F1-model_v4 Nicotinate-nucleotide diphosphorylase (Carboxylating) (EC 2.4.2.19) 0.9767 168 275 GO:0004514
GO:0005737
GO:0009435
GO:0034213
AF-A0A529P2B4-F1-model_v4 Nicotinate-nucleotide diphosphorylase (Carboxylating) (EC 2.4.2.19) 0.9764 164 278 GO:0004514
GO:0005737
GO:0009435
GO:0034213
AF-A0A5A7MVA9-F1-model_v4 Quinolinate phosphoribosyl transferase C-terminal domain-containing protein 0.9732 164 278 GO:0004514
GO:0005737
GO:0009435
GO:0034213
AF-A0A7V9PM05-F1-model_v4 deleted 0.9681 116 277

Feature Viewer

pLDDT pTM Quality
88.01 0.86 High
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Predicted Structure (AlphaFold2)

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