F321300
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 211 | 129 | 211 | 318 |
Family's Representative Sequence
| Representative Sequence | 3300005434|Ga0070709_10175491|Ga0070709_101754911 |
| Length | 364 |
| Sequence | MGKRPSTGSPILPTYCLFLLYAKSQWHSWGENAIFGSEFTGCGMNKSKETPTVKANPARALPAELAHKIASFLGDEEKRITEIPGMSLHRRTSPTPPCRTTYHPGIIVVAQGAKQVNLGQKSFIYDESKYLLTAVDLPIVSWVAKATEEMPCLVLSLKLDISMVREVLSREEIHVVDTASDSPAISLGETTPEFLSACCRMLDLLSSPQDIPFLHGLIQREIIYRVLHGNVGTRLRAVATLGDQSHRTAKAIAWIAANYTKPLHVEELAQLASMGVSTLHHHFRMLTAMSPLQYQKQLRLQFARNLMLNNGLDASSAAFEVGYESATQFNREYSRFFGQPPIRDVRELRHSETRTSDRPMTQIA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 2 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 3 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 4 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 5 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 6 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 11 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 15 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 17 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 19 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 20 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 21 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 22 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 23 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 24 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 25 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 28 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 30 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 31 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300028016 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 | Metagenome | Rhizosphere |
| 75 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 79 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 80 | 3300030878 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 81 | 3300030879 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 82 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 83 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 84 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 85 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 86 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 87 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 88 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 89 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 90 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 91 | 3300033547 | Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 | Metagenome | Unclassified |
| 92 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 93 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 94 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 95 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 96 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 97 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 124 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 125 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 126 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 127 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 128 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.1 |
| Metatranscriptomes | 1.9 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 4.27 |
| Rhizosphere | 94.79 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.95 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070683_100177458 | 3300005329 | Bacteria | 2022 |
| 2 | Ga0070683_100335348 | 3300005329 | Unclassified | 1440 |
| 3 | Ga0068869_100030829 | 3300005334 | Unclassified | 3768 |
| 4 | Ga0068868_100041824 | 3300005338 | Unclassified | 3572 |
| 5 | Ga0070689_100222298 | 3300005340 | Bacteria | 1549 |
| 6 | Ga0070709_10175491 | 3300005434 | Bacteria | 1501 |
| 7 | Ga0070714_100352888 | 3300005435 | Bacteria | 1382 |
| 8 | Ga0070713_100047451 | 3300005436 | Bacteria | 3530 |
| 9 | Ga0070713_100075880 | 3300005436 | Bacteria | 2852 |
| 10 | Ga0070711_100009028 | 3300005439 | Bacteria | 6121 |
| 11 | Ga0070708_100055823 | 3300005445 | Bacteria | 3512 |
| 12 | Ga0070681_10162453 | 3300005458 | Bacteria | 2157 |
| 13 | Ga0070685_10025834 | 3300005466 | Unclassified | 3234 |
| 14 | Ga0070706_100019243 | 3300005467 | Bacteria | 6299 |
| 15 | Ga0070706_100020678 | 3300005467 | Bacteria | 6065 |
| 16 | Ga0070706_100035062 | 3300005467 | Bacteria | 4633 |
| 17 | Ga0070706_100044622 | 3300005467 | Bacteria | 4095 |
| 18 | Ga0070707_100004848 | 3300005468 | Bacteria | 12603 |
| 19 | Ga0070707_100130082 | 3300005468 | Bacteria | 2448 |
| 20 | Ga0070707_100194546 | 3300005468 | Unclassified | 1977 |
| 21 | Ga0070679_100204747 | 3300005530 | Bacteria | 1938 |
| 22 | Ga0070697_100018841 | 3300005536 | Bacteria | 5446 |
| 23 | Ga0070697_100024194 | 3300005536 | Bacteria | 4834 |
| 24 | Ga0070697_100112897 | 3300005536 | Bacteria | 2267 |
| 25 | Ga0068853_100109036 | 3300005539 | Bacteria | 2457 |
| 26 | Ga0070665_100000609 | 3300005548 | Bacteria | 49310 |
| 27 | Ga0068855_100008470 | 3300005563 | Bacteria | 12434 |
| 28 | Ga0068855_100010201 | 3300005563 | Bacteria | 11324 |
| 29 | Ga0068855_100028545 | 3300005563 | Bacteria | 6675 |
| 30 | Ga0068854_100054830 | 3300005578 | Bacteria | 2869 |
| 31 | Ga0068854_100206478 | 3300005578 | Unclassified | 1547 |
| 32 | Ga0068856_100004400 | 3300005614 | Bacteria | 14039 |
| 33 | Ga0068856_100083162 | 3300005614 | Bacteria | 3178 |
| 34 | Ga0068863_100038696 | 3300005841 | Bacteria | 4537 |
| 35 | Ga0068863_100105303 | 3300005841 | Bacteria | 2684 |
| 36 | Ga0068858_100000985 | 3300005842 | Bacteria | 29388 |
| 37 | Ga0068858_100408426 | 3300005842 | Bacteria | 1305 |
| 38 | Ga0068860_100017754 | 3300005843 | Bacteria | 6933 |
| 39 | Ga0068860_100055451 | 3300005843 | Unclassified | 3768 |
| 40 | Ga0068862_100251668 | 3300005844 | Unclassified | 1610 |
| 41 | Ga0070717_10025193 | 3300006028 | Bacteria | 4727 |
| 42 | Ga0070717_10056902 | 3300006028 | Bacteria | 3232 |
| 43 | Ga0070715_10055336 | 3300006163 | Bacteria | 1722 |
| 44 | Ga0070712_100056642 | 3300006175 | Bacteria | 2750 |
| 45 | Ga0070712_100104997 | 3300006175 | Bacteria | 2097 |
| 46 | Ga0097621_100002211 | 3300006237 | Bacteria | 13321 |
| 47 | Ga0097621_100047485 | 3300006237 | Bacteria | 3480 |
| 48 | Ga0097621_100175226 | 3300006237 | Bacteria | 1851 |
| 49 | Ga0068871_100001877 | 3300006358 | Bacteria | 14212 |
| 50 | Ga0068871_100059222 | 3300006358 | Bacteria | 3120 |
| 51 | Ga0075435_100002568 | 3300007076 | Bacteria | 12105 |
| 52 | Ga0075435_100232860 | 3300007076 | Bacteria | 1565 |
| 53 | Ga0105240_10014252 | 3300009093 | Bacteria | 10860 |
| 54 | Ga0105240_10058016 | 3300009093 | Bacteria | 4833 |
| 55 | Ga0105240_10058163 | 3300009093 | Bacteria | 4827 |
| 56 | Ga0105240_10303971 | 3300009093 | Bacteria | 1824 |
| 57 | Ga0105240_10673591 | 3300009093 | Bacteria | 1132 |
| 58 | Ga0105245_10220310 | 3300009098 | Bacteria | 1830 |
| 59 | Ga0105241_10025946 | 3300009174 | Bacteria | 4358 |
| 60 | Ga0105248_10018270 | 3300009177 | Bacteria | 7743 |
| 61 | Ga0105248_10143401 | 3300009177 | Bacteria | 2695 |
| 62 | Ga0105248_10656139 | 3300009177 | Bacteria | 1184 |
| 63 | Ga0105237_10041820 | 3300009545 | Bacteria | 4621 |
| 64 | Ga0105237_10100588 | 3300009545 | Bacteria | 2883 |
| 65 | Ga0105237_10191421 | 3300009545 | Bacteria | 2046 |
| 66 | Ga0105237_10430552 | 3300009545 | Bacteria | 1325 |
| 67 | Ga0105238_10031639 | 3300009551 | Bacteria | 5386 |
| 68 | Ga0105238_10433512 | 3300009551 | Bacteria | 1310 |
| 69 | Ga0105249_10131959 | 3300009553 | Bacteria | 2386 |
| 70 | Ga0105239_10128675 | 3300010375 | Bacteria | 2815 |
| 71 | Ga0105239_10562442 | 3300010375 | Unclassified | 1299 |
| 72 | Ga0157369_10017970 | 3300013105 | Bacteria | 7937 |
| 73 | Ga0157369_10060184 | 3300013105 | Bacteria | 4095 |
| 74 | Ga0157369_10080189 | 3300013105 | Plasmid | 3495 |
| 75 | Ga0157369_10401053 | 3300013105 | Bacteria | 1423 |
| 76 | Ga0157369_10658365 | 3300013105 | Bacteria | 1080 |
| 77 | Ga0157374_10021123 | 3300013296 | Bacteria | 5786 |
| 78 | Ga0157374_10125920 | 3300013296 | Bacteria | 2477 |
| 79 | Ga0157378_10063856 | 3300013297 | Bacteria | 3291 |
| 80 | Ga0163162_10014107 | 3300013306 | Bacteria | 7809 |
| 81 | Ga0157372_10002213 | 3300013307 | Bacteria | 21120 |
| 82 | Ga0157372_10005967 | 3300013307 | Bacteria | 12946 |
| 83 | Ga0157372_10099553 | 3300013307 | Bacteria | 3316 |
| 84 | Ga0157372_10274700 | 3300013307 | Bacteria | 1959 |
| 85 | Ga0157375_10005161 | 3300013308 | Bacteria | 11336 |
| 86 | Ga0163163_10207692 | 3300014325 | Bacteria | 2007 |
| 87 | Ga0157379_10021894 | 3300014968 | Bacteria | 5664 |
| 88 | Ga0157379_10099012 | 3300014968 | Plasmid | 2617 |
| 89 | Ga0157379_10227755 | 3300014968 | Bacteria | 1689 |
| 90 | Ga0157376_10000005 | 3300014969 | Bacteria | 443695 |
| 91 | Ga0157376_10102792 | 3300014969 | Bacteria | 2500 |
| 92 | Ga0157376_10127101 | 3300014969 | Bacteria | 2269 |
| 93 | Ga0207692_10098594 | 3300025898 | Bacteria | 1599 |
| 94 | Ga0207647_10013187 | 3300025904 | Bacteria | 5740 |
| 95 | Ga0207685_10005307 | 3300025905 | Bacteria | 3388 |
| 96 | Ga0207699_10178175 | 3300025906 | Bacteria | 1427 |
| 97 | Ga0207684_10012587 | 3300025910 | Bacteria | 7352 |
| 98 | Ga0207684_10029510 | 3300025910 | Bacteria | 4670 |
| 99 | Ga0207707_10218090 | 3300025912 | Bacteria | 1661 |
| 100 | Ga0207671_10326181 | 3300025914 | Bacteria | 1215 |
| 101 | Ga0207693_10015721 | 3300025915 | Bacteria | 6065 |
| 102 | Ga0207693_10054222 | 3300025915 | Bacteria | 3146 |
| 103 | Ga0207693_10064564 | 3300025915 | Bacteria | 2868 |
| 104 | Ga0207663_10086054 | 3300025916 | Bacteria | 2072 |
| 105 | Ga0207663_10159403 | 3300025916 | Bacteria | 1591 |
| 106 | Ga0207663_10199955 | 3300025916 | Bacteria | 1441 |
| 107 | Ga0207652_10190811 | 3300025921 | Bacteria | 1843 |
| 108 | Ga0207646_10001894 | 3300025922 | Bacteria | 25191 |
| 109 | Ga0207646_10084304 | 3300025922 | Bacteria | 2843 |
| 110 | Ga0207646_10321290 | 3300025922 | Unclassified | 1399 |
| 111 | Ga0207700_10003885 | 3300025928 | Bacteria | 8733 |
| 112 | Ga0207700_10013653 | 3300025928 | Bacteria | 5294 |
| 113 | Ga0207700_10047007 | 3300025928 | Bacteria | 3196 |
| 114 | Ga0207700_10135323 | 3300025928 | Bacteria | 2018 |
| 115 | Ga0207664_10059175 | 3300025929 | Bacteria | 3050 |
| 116 | Ga0207664_10105487 | 3300025929 | Bacteria | 2335 |
| 117 | Ga0207704_10009426 | 3300025938 | Unclassified | 4710 |
| 118 | Ga0207711_10095438 | 3300025941 | Bacteria | 2623 |
| 119 | Ga0207689_10004368 | 3300025942 | Bacteria | 12864 |
| 120 | Ga0207661_10138037 | 3300025944 | Bacteria | 2096 |
| 121 | Ga0207667_10007765 | 3300025949 | Bacteria | 12825 |
| 122 | Ga0207712_10014697 | 3300025961 | Bacteria | 5041 |
| 123 | Ga0207640_10036684 | 3300025981 | Bacteria | 3079 |
| 124 | Ga0207677_10104143 | 3300026023 | Unclassified | 2097 |
| 125 | Ga0207703_10010002 | 3300026035 | Bacteria | 7435 |
| 126 | Ga0207703_10225502 | 3300026035 | Bacteria | 1677 |
| 127 | Ga0207678_10007664 | 3300026067 | Bacteria | 9535 |
| 128 | Ga0207702_10224877 | 3300026078 | Bacteria | 1750 |
| 129 | Ga0207641_10040323 | 3300026088 | Bacteria | 3909 |
| 130 | Ga0207641_10078000 | 3300026088 | Unclassified | 2868 |
| 131 | Ga0207641_10126703 | 3300026088 | Bacteria | 2287 |
| 132 | Ga0209588_1014334 | 3300027671 | Bacteria | 2425 |
| 133 | Ga0265354_1000204 | 3300028016 | Bacteria | 10905 |
| 134 | Ga0268266_10000266 | 3300028379 | Bacteria | 87231 |
| 135 | Ga0268265_10227915 | 3300028380 | Unclassified | 1635 |
| 136 | Ga0268264_10048974 | 3300028381 | Unclassified | 3515 |
| 137 | Ga0265318_10026525 | 3300028577 | Bacteria | 2281 |
| 138 | Ga0265336_10002094 | 3300028666 | Bacteria | 8476 |
| 139 | Ga0265770_1001598 | 3300030878 | Bacteria | 3108 |
| 140 | Ga0265765_1009643 | 3300030879 | Bacteria | 1066 |
| 141 | Ga0265760_10002054 | 3300031090 | Bacteria | 5928 |
| 142 | Ga0265760_10033280 | 3300031090 | Bacteria | 1523 |
| 143 | Ga0265328_10032585 | 3300031239 | Bacteria | 1934 |
| 144 | Ga0265320_10005985 | 3300031240 | Bacteria | 7728 |
| 145 | Ga0265325_10048497 | 3300031241 | Bacteria | 2195 |
| 146 | Ga0265329_10005500 | 3300031242 | Bacteria | 5112 |
| 147 | Ga0265340_10011831 | 3300031247 | Bacteria | 4625 |
| 148 | Ga0265331_10004840 | 3300031250 | Bacteria | 8293 |
| 149 | Ga0265316_10017413 | 3300031344 | Bacteria | 6213 |
| 150 | Ga0265316_10021111 | 3300031344 | Bacteria | 5525 |
| 151 | Ga0265316_10132539 | 3300031344 | Bacteria | 1876 |
| 152 | Ga0265342_10046116 | 3300031712 | Bacteria | 2621 |
| 153 | Ga0316212_1003450 | 3300033547 | Bacteria | 2283 |
| 154 | Ga0373927_0005280 | 3300035695 | Bacteria | 8936 |
| 155 | Ga0373933_0058334 | 3300035724 | Bacteria | 2322 |
| 156 | Ga0373937_0562316 | 3300036401 | Bacteria | 1083 |
| 157 | Ga0373937_0700511 | 3300036401 | Bacteria | 959 |
| 158 | Ga0436365_0570153 | 3300039437 | Bacteria | 3172 |
| 159 | Ga0436361_0010635 | 3300039447 | Bacteria | 60260 |
| 160 | Ga0495603_0191693 | 3300046455 | Bacteria | 1182 |
| 161 | Ga0495629_0037159 | 3300046459 | Bacteria | 3433 |
| 162 | Ga0495651_0040441 | 3300046462 | Bacteria | 3626 |
| 163 | Ga0495580_0027907 | 3300046472 | Bacteria | 4106 |
| 164 | Ga0495580_0087250 | 3300046472 | Bacteria | 2173 |
| 165 | Ga0495582_0082232 | 3300046473 | Bacteria | 1789 |
| 166 | Ga0495639_0044235 | 3300046475 | Bacteria | 2013 |
| 167 | Ga0495594_0002139 | 3300046499 | Bacteria | 10285 |
| 168 | Ga0495594_0082471 | 3300046499 | Bacteria | 1796 |
| 169 | Ga0495630_0003428 | 3300046517 | Bacteria | 11038 |
| 170 | Ga0495630_0148187 | 3300046517 | Unclassified | 1785 |
| 171 | Ga0495652_0096413 | 3300046529 | Bacteria | 2408 |
| 172 | Ga0495640_0028430 | 3300046533 | Bacteria | 4026 |
| 173 | Ga0495640_0116187 | 3300046533 | Unclassified | 1743 |
| 174 | Ga0495640_0242275 | 3300046533 | Bacteria | 1131 |
| 175 | Ga0495587_0073431 | 3300046536 | Bacteria | 1987 |
| 176 | Ga0495587_0075736 | 3300046536 | Bacteria | 1954 |
| 177 | Ga0495645_0017619 | 3300046543 | Bacteria | 5118 |
| 178 | Ga0495667_0221953 | 3300046559 | Unclassified | 1206 |
| 179 | Ga0495599_0003150 | 3300046678 | Bacteria | 9612 |
| 180 | Ga0495647_0005895 | 3300046681 | Bacteria | 4034 |
| 181 | Ga0495658_0010540 | 3300046683 | Bacteria | 4625 |
| 182 | Ga0495613_0006688 | 3300046689 | Bacteria | 8609 |
| 183 | Ga0495613_0019346 | 3300046689 | Bacteria | 5077 |
| 184 | Ga0495613_0028188 | 3300046689 | Bacteria | 4177 |
| 185 | Ga0495624_0147838 | 3300046690 | Viruses | 1438 |
| 186 | Ga0495600_0234794 | 3300046809 | Viruses | 1170 |
| 187 | Ga0495581_0063069 | 3300047315 | Bacteria | 2141 |
| 188 | Ga0495581_0074571 | 3300047315 | Bacteria | 1963 |
| 189 | Ga0495604_0045218 | 3300047317 | Bacteria | 3437 |
| 190 | Ga0495674_0006547 | 3300047319 | Bacteria | 11176 |
| 191 | Ga0495674_0157910 | 3300047319 | Bacteria | 1899 |
| 192 | Ga0495676_0031451 | 3300047321 | Bacteria | 4489 |
| 193 | Ga0495675_0014642 | 3300047444 | Bacteria | 4954 |
| 194 | Ga0495684_0019205 | 3300047471 | Bacteria | 5260 |
| 195 | Ga0495684_0060516 | 3300047471 | Bacteria | 2883 |
| 196 | Ga0495684_0061672 | 3300047471 | Bacteria | 2852 |
| 197 | Ga0495602_0065150 | 3300048088 | Bacteria | 3146 |
| 198 | Ga0495602_0130515 | 3300048088 | Bacteria | 2005 |
| 199 | Ga0496101_0168160 | 3300048904 | Bacteria | 1684 |
| 200 | Ga0496104_0227825 | 3300048907 | Bacteria | 1776 |
| 201 | Ga0496112_0009838 | 3300048915 | Bacteria | 8639 |
| 202 | Ga0496114_0003965 | 3300048917 | Bacteria | 11427 |
| 203 | Ga0496114_0045553 | 3300048917 | Bacteria | 3644 |
| 204 | Ga0496114_0060067 | 3300048917 | Plasmid | 3177 |
| 205 | Ga0496115_0036979 | 3300048918 | Unclassified | 3867 |
| 206 | Ga0496115_0154876 | 3300048918 | Bacteria | 1893 |
| 207 | Ga0496115_0268753 | 3300048918 | Bacteria | 1401 |
| 208 | nmdc:mga0rr50_1675_c1 | 3300050513 | Bacteria | 12213 |
| 209 | nmdc:mga0rr50_174619_c1 | 3300050513 | Bacteria | 1753 |
| 210 | Ga0495619_0067336 | 3300053085 | Bacteria | 2391 |
| 211 | Ga0495619_0204999 | 3300053085 | Bacteria | 1365 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300013105 | Ga0157369_10080189 | Ga0157369_100801893 | 253 |
| 2 | 3300013105 | Ga0157369_10658365 | Ga0157369_106583651 | 261 |
| 3 | 3300013307 | Ga0157372_10002213 | Ga0157372_100022135 | 261 |
| 4 | 3300036401 | Ga0373937_0700511 | Ga0373937_0700511_78_878 | 262 |
| 5 | 3300046462 | Ga0495651_0040441 | Ga0495651_0040441_419_1219 | 262 |
| 6 | 3300047471 | Ga0495684_0019205 | Ga0495684_0019205_2275_3075 | 262 |
| 7 | 3300009177 | Ga0105248_10018270 | Ga0105248_100182704 | 275 |
| 8 | 3300009093 | Ga0105240_10673591 | Ga0105240_106735911 | 290 |
| 9 | 3300009545 | Ga0105237_10191421 | Ga0105237_101914212 | 290 |
| 10 | 3300013296 | Ga0157374_10125920 | Ga0157374_101259203 | 295 |
| 11 | 3300035724 | Ga0373933_0058334 | Ga0373933_0058334_1402_2289 | 295 |
| 12 | 3300046472 | Ga0495580_0087250 | Ga0495580_0087250_1052_1939 | 295 |
| 13 | 3300046536 | Ga0495587_0073431 | Ga0495587_0073431_213_1100 | 295 |
| 14 | 3300046543 | Ga0495645_0017619 | Ga0495645_0017619_429_1316 | 295 |
| 15 | 3300046689 | Ga0495613_0019346 | Ga0495613_0019346_500_1387 | 295 |
| 16 | 3300046690 | Ga0495624_0147838 | Ga0495624_0147838_230_1117 | 295 |
| 17 | 3300046809 | Ga0495600_0234794 | Ga0495600_0234794_167_1054 | 295 |
| 18 | 3300047471 | Ga0495684_0060516 | Ga0495684_0060516_18_905 | 295 |
| 19 | 3300048088 | Ga0495602_0130515 | Ga0495602_0130515_360_1247 | 295 |
| 20 | 3300053085 | Ga0495619_0067336 | Ga0495619_0067336_921_1808 | 295 |
| 21 | 3300005467 | Ga0070706_100035062 | Ga0070706_1000350623 | 296 |
| 22 | 3300005536 | Ga0070697_100024194 | Ga0070697_1000241943 | 296 |
| 23 | 3300009553 | Ga0105249_10131959 | Ga0105249_101319592 | 296 |
| 24 | 3300013105 | Ga0157369_10401053 | Ga0157369_104010531 | 296 |
| 25 | 3300014325 | Ga0163163_10207692 | Ga0163163_102076922 | 297 |
| 26 | 3300026067 | Ga0207678_10007664 | Ga0207678_100076648 | 297 |
| 27 | 3300048917 | Ga0496114_0003965 | Ga0496114_0003965_2399_3298 | 297 |
| 28 | 3300005445 | Ga0070708_100055823 | Ga0070708_1000558232 | 300 |
| 29 | 3300005467 | Ga0070706_100044622 | Ga0070706_1000446223 | 300 |
| 30 | 3300005468 | Ga0070707_100130082 | Ga0070707_1001300822 | 300 |
| 31 | 3300005536 | Ga0070697_100112897 | Ga0070697_1001128971 | 300 |
| 32 | 3300025922 | Ga0207646_10084304 | Ga0207646_100843041 | 300 |
| 33 | 3300046559 | Ga0495667_0221953 | Ga0495667_0221953_281_1192 | 300 |
| 34 | 3300009098 | Ga0105245_10220310 | Ga0105245_102203101 | 301 |
| 35 | 3300014968 | Ga0157379_10227755 | Ga0157379_102277551 | 301 |
| 36 | 3300025961 | Ga0207712_10014697 | Ga0207712_100146972 | 301 |
| 37 | 3300005563 | Ga0068855_100028545 | Ga0068855_1000285457 | 302 |
| 38 | 3300009093 | Ga0105240_10303971 | Ga0105240_103039712 | 302 |
| 39 | 3300046529 | Ga0495652_0096413 | Ga0495652_0096413_271_1338 | 306 |
| 40 | 3300046678 | Ga0495599_0003150 | Ga0495599_0003150_804_1871 | 306 |
| 41 | 3300047317 | Ga0495604_0045218 | Ga0495604_0045218_2181_3248 | 306 |
| 42 | 3300047471 | Ga0495684_0061672 | Ga0495684_0061672_1032_2099 | 306 |
| 43 | 3300048088 | Ga0495602_0065150 | Ga0495602_0065150_1809_2876 | 306 |
| 44 | 3300007076 | Ga0075435_100232860 | Ga0075435_1002328602 | 307 |
| 45 | 3300028016 | Ga0265354_1000204 | Ga0265354_10002047 | 307 |
| 46 | 3300028666 | Ga0265336_10002094 | Ga0265336_1000209410 | 307 |
| 47 | 3300030878 | Ga0265770_1001598 | Ga0265770_10015984 | 307 |
| 48 | 3300030879 | Ga0265765_1009643 | Ga0265765_10096431 | 307 |
| 49 | 3300031090 | Ga0265760_10002054 | Ga0265760_100020543 | 307 |
| 50 | 3300031344 | Ga0265316_10021111 | Ga0265316_100211115 | 307 |
| 51 | 3300033547 | Ga0316212_1003450 | Ga0316212_10034501 | 307 |
| 52 | 3300046533 | Ga0495640_0242275 | Ga0495640_0242275_117_1076 | 307 |
| 53 | 3300005467 | Ga0070706_100019243 | Ga0070706_1000192433 | 310 |
| 54 | 3300005841 | Ga0068863_100038696 | Ga0068863_1000386964 | 310 |
| 55 | 3300005842 | Ga0068858_100408426 | Ga0068858_1004084261 | 310 |
| 56 | 3300026088 | Ga0207641_10040323 | Ga0207641_100403232 | 310 |
| 57 | 3300010375 | Ga0105239_10562442 | Ga0105239_105624422 | 311 |
| 58 | 3300005468 | Ga0070707_100194546 | Ga0070707_1001945462 | 312 |
| 59 | 3300025910 | Ga0207684_10029510 | Ga0207684_100295102 | 312 |
| 60 | 3300025922 | Ga0207646_10321290 | Ga0207646_103212902 | 312 |
| 61 | 3300005329 | Ga0070683_100335348 | Ga0070683_1003353481 | 313 |
| 62 | 3300005434 | Ga0070709_10175491 | Ga0070709_101754911 | 313 |
| 63 | 3300005435 | Ga0070714_100352888 | Ga0070714_1003528881 | 313 |
| 64 | 3300005436 | Ga0070713_100075880 | Ga0070713_1000758803 | 313 |
| 65 | 3300005439 | Ga0070711_100009028 | Ga0070711_1000090284 | 313 |
| 66 | 3300005563 | Ga0068855_100008470 | Ga0068855_1000084705 | 313 |
| 67 | 3300005578 | Ga0068854_100206478 | Ga0068854_1002064781 | 313 |
| 68 | 3300006028 | Ga0070717_10025193 | Ga0070717_100251933 | 313 |
| 69 | 3300006237 | Ga0097621_100175226 | Ga0097621_1001752263 | 313 |
| 70 | 3300009174 | Ga0105241_10025946 | Ga0105241_100259463 | 313 |
| 71 | 3300025916 | Ga0207663_10086054 | Ga0207663_100860543 | 313 |
| 72 | 3300025916 | Ga0207663_10199955 | Ga0207663_101999552 | 313 |
| 73 | 3300025928 | Ga0207700_10013653 | Ga0207700_100136535 | 313 |
| 74 | 3300025928 | Ga0207700_10047007 | Ga0207700_100470073 | 313 |
| 75 | 3300025929 | Ga0207664_10059175 | Ga0207664_100591752 | 313 |
| 76 | 3300036401 | Ga0373937_0562316 | Ga0373937_0562316_90_1052 | 313 |
| 77 | 3300005548 | Ga0070665_100000609 | Ga0070665_10000060932 | 314 |
| 78 | 3300005843 | Ga0068860_100017754 | Ga0068860_1000177546 | 314 |
| 79 | 3300006237 | Ga0097621_100047485 | Ga0097621_1000474854 | 314 |
| 80 | 3300006358 | Ga0068871_100001877 | Ga0068871_1000018776 | 314 |
| 81 | 3300009093 | Ga0105240_10058163 | Ga0105240_100581634 | 314 |
| 82 | 3300009545 | Ga0105237_10100588 | Ga0105237_101005882 | 314 |
| 83 | 3300013105 | Ga0157369_10017970 | Ga0157369_100179703 | 314 |
| 84 | 3300013307 | Ga0157372_10005967 | Ga0157372_100059675 | 314 |
| 85 | 3300013307 | Ga0157372_10274700 | Ga0157372_102747003 | 314 |
| 86 | 3300014969 | Ga0157376_10000005 | Ga0157376_10000005361 | 314 |
| 87 | 3300028379 | Ga0268266_10000266 | Ga0268266_1000026637 | 314 |
| 88 | 3300046533 | Ga0495640_0116187 | Ga0495640_0116187_258_1223 | 314 |
| 89 | 3300048917 | Ga0496114_0045553 | Ga0496114_0045553_2085_3050 | 314 |
| 90 | 3300048918 | Ga0496115_0154876 | Ga0496115_0154876_819_1784 | 314 |
| 91 | 3300048918 | Ga0496115_0268753 | Ga0496115_0268753_396_1361 | 314 |
| 92 | 3300050513 | nmdc:mga0rr50_174619_c1 | nmdc:mga0rr50_174619_c1_420_1460 | 314 |
| 93 | 3300009093 | Ga0105240_10058016 | Ga0105240_100580162 | 315 |
| 94 | 3300013105 | Ga0157369_10060184 | Ga0157369_100601842 | 315 |
| 95 | 3300014969 | Ga0157376_10127101 | Ga0157376_101271012 | 315 |
| 96 | 3300025981 | Ga0207640_10036684 | Ga0207640_100366843 | 315 |
| 97 | 3300028577 | Ga0265318_10026525 | Ga0265318_100265252 | 315 |
| 98 | 3300031239 | Ga0265328_10032585 | Ga0265328_100325852 | 315 |
| 99 | 3300031240 | Ga0265320_10005985 | Ga0265320_100059855 | 315 |
| 100 | 3300031241 | Ga0265325_10048497 | Ga0265325_100484972 | 315 |
| 101 | 3300031242 | Ga0265329_10005500 | Ga0265329_100055003 | 315 |
| 102 | 3300031247 | Ga0265340_10011831 | Ga0265340_100118313 | 315 |
| 103 | 3300031250 | Ga0265331_10004840 | Ga0265331_100048403 | 315 |
| 104 | 3300031344 | Ga0265316_10017413 | Ga0265316_100174135 | 315 |
| 105 | 3300031712 | Ga0265342_10046116 | Ga0265342_100461163 | 315 |
| 106 | 3300046536 | Ga0495587_0075736 | Ga0495587_0075736_826_1794 | 315 |
| 107 | 3300047319 | Ga0495674_0157910 | Ga0495674_0157910_177_1136 | 315 |
| 108 | 3300047444 | Ga0495675_0014642 | Ga0495675_0014642_1908_2876 | 315 |
| 109 | 3300005329 | Ga0070683_100177458 | Ga0070683_1001774582 | 316 |
| 110 | 3300005334 | Ga0068869_100030829 | Ga0068869_1000308292 | 316 |
| 111 | 3300005338 | Ga0068868_100041824 | Ga0068868_1000418242 | 316 |
| 112 | 3300005340 | Ga0070689_100222298 | Ga0070689_1002222981 | 316 |
| 113 | 3300005436 | Ga0070713_100047451 | Ga0070713_1000474513 | 316 |
| 114 | 3300005458 | Ga0070681_10162453 | Ga0070681_101624532 | 316 |
| 115 | 3300005466 | Ga0070685_10025834 | Ga0070685_100258342 | 316 |
| 116 | 3300005467 | Ga0070706_100020678 | Ga0070706_1000206782 | 316 |
| 117 | 3300005468 | Ga0070707_100004848 | Ga0070707_1000048489 | 316 |
| 118 | 3300005530 | Ga0070679_100204747 | Ga0070679_1002047472 | 316 |
| 119 | 3300005536 | Ga0070697_100018841 | Ga0070697_1000188412 | 316 |
| 120 | 3300005539 | Ga0068853_100109036 | Ga0068853_1001090362 | 316 |
| 121 | 3300005563 | Ga0068855_100010201 | Ga0068855_10001020110 | 316 |
| 122 | 3300005578 | Ga0068854_100054830 | Ga0068854_1000548303 | 316 |
| 123 | 3300005614 | Ga0068856_100004400 | Ga0068856_10000440011 | 316 |
| 124 | 3300005614 | Ga0068856_100083162 | Ga0068856_1000831622 | 316 |
| 125 | 3300005841 | Ga0068863_100105303 | Ga0068863_1001053032 | 316 |
| 126 | 3300005842 | Ga0068858_100000985 | Ga0068858_10000098527 | 316 |
| 127 | 3300005843 | Ga0068860_100055451 | Ga0068860_1000554513 | 316 |
| 128 | 3300005844 | Ga0068862_100251668 | Ga0068862_1002516682 | 316 |
| 129 | 3300006028 | Ga0070717_10056902 | Ga0070717_100569023 | 316 |
| 130 | 3300006163 | Ga0070715_10055336 | Ga0070715_100553363 | 316 |
| 131 | 3300006175 | Ga0070712_100056642 | Ga0070712_1000566423 | 316 |
| 132 | 3300006175 | Ga0070712_100104997 | Ga0070712_1001049972 | 316 |
| 133 | 3300006237 | Ga0097621_100002211 | Ga0097621_1000022114 | 316 |
| 134 | 3300006358 | Ga0068871_100059222 | Ga0068871_1000592224 | 316 |
| 135 | 3300007076 | Ga0075435_100002568 | Ga0075435_1000025689 | 316 |
| 136 | 3300009093 | Ga0105240_10014252 | Ga0105240_100142528 | 316 |
| 137 | 3300009177 | Ga0105248_10143401 | Ga0105248_101434012 | 316 |
| 138 | 3300009177 | Ga0105248_10656139 | Ga0105248_106561392 | 316 |
| 139 | 3300009545 | Ga0105237_10041820 | Ga0105237_100418204 | 316 |
| 140 | 3300009545 | Ga0105237_10430552 | Ga0105237_104305521 | 316 |
| 141 | 3300009551 | Ga0105238_10031639 | Ga0105238_100316393 | 316 |
| 142 | 3300009551 | Ga0105238_10433512 | Ga0105238_104335121 | 316 |
| 143 | 3300010375 | Ga0105239_10128675 | Ga0105239_101286752 | 316 |
| 144 | 3300013296 | Ga0157374_10021123 | Ga0157374_100211233 | 316 |
| 145 | 3300013297 | Ga0157378_10063856 | Ga0157378_100638561 | 316 |
| 146 | 3300013306 | Ga0163162_10014107 | Ga0163162_100141072 | 316 |
| 147 | 3300013307 | Ga0157372_10099553 | Ga0157372_100995532 | 316 |
| 148 | 3300013308 | Ga0157375_10005161 | Ga0157375_100051619 | 316 |
| 149 | 3300014968 | Ga0157379_10021894 | Ga0157379_100218945 | 316 |
| 150 | 3300014968 | Ga0157379_10099012 | Ga0157379_100990121 | 316 |
| 151 | 3300014969 | Ga0157376_10102792 | Ga0157376_101027923 | 316 |
| 152 | 3300025898 | Ga0207692_10098594 | Ga0207692_100985942 | 316 |
| 153 | 3300025904 | Ga0207647_10013187 | Ga0207647_100131872 | 316 |
| 154 | 3300025905 | Ga0207685_10005307 | Ga0207685_100053071 | 316 |
| 155 | 3300025906 | Ga0207699_10178175 | Ga0207699_101781751 | 316 |
| 156 | 3300025910 | Ga0207684_10012587 | Ga0207684_1001258710 | 316 |
| 157 | 3300025912 | Ga0207707_10218090 | Ga0207707_102180902 | 316 |
| 158 | 3300025914 | Ga0207671_10326181 | Ga0207671_103261812 | 316 |
| 159 | 3300025915 | Ga0207693_10015721 | Ga0207693_100157214 | 316 |
| 160 | 3300025915 | Ga0207693_10054222 | Ga0207693_100542223 | 316 |
| 161 | 3300025915 | Ga0207693_10064564 | Ga0207693_100645643 | 316 |
| 162 | 3300025916 | Ga0207663_10159403 | Ga0207663_101594032 | 316 |
| 163 | 3300025921 | Ga0207652_10190811 | Ga0207652_101908112 | 316 |
| 164 | 3300025922 | Ga0207646_10001894 | Ga0207646_1000189420 | 316 |
| 165 | 3300025928 | Ga0207700_10003885 | Ga0207700_100038852 | 316 |
| 166 | 3300025928 | Ga0207700_10135323 | Ga0207700_101353232 | 316 |
| 167 | 3300025929 | Ga0207664_10105487 | Ga0207664_101054872 | 316 |
| 168 | 3300025938 | Ga0207704_10009426 | Ga0207704_100094263 | 316 |
| 169 | 3300025941 | Ga0207711_10095438 | Ga0207711_100954383 | 316 |
| 170 | 3300025942 | Ga0207689_10004368 | Ga0207689_1000436812 | 316 |
| 171 | 3300025944 | Ga0207661_10138037 | Ga0207661_101380371 | 316 |
| 172 | 3300025949 | Ga0207667_10007765 | Ga0207667_100077651 | 316 |
| 173 | 3300026023 | Ga0207677_10104143 | Ga0207677_101041432 | 316 |
| 174 | 3300026035 | Ga0207703_10010002 | Ga0207703_100100023 | 316 |
| 175 | 3300026035 | Ga0207703_10225502 | Ga0207703_102255021 | 316 |
| 176 | 3300026078 | Ga0207702_10224877 | Ga0207702_102248772 | 316 |
| 177 | 3300026088 | Ga0207641_10078000 | Ga0207641_100780002 | 316 |
| 178 | 3300026088 | Ga0207641_10126703 | Ga0207641_101267032 | 316 |
| 179 | 3300027671 | Ga0209588_1014334 | Ga0209588_10143343 | 316 |
| 180 | 3300028380 | Ga0268265_10227915 | Ga0268265_102279152 | 316 |
| 181 | 3300028381 | Ga0268264_10048974 | Ga0268264_100489742 | 316 |
| 182 | 3300031090 | Ga0265760_10033280 | Ga0265760_100332801 | 316 |
| 183 | 3300031344 | Ga0265316_10132539 | Ga0265316_101325391 | 316 |
| 184 | 3300035695 | Ga0373927_0005280 | Ga0373927_0005280_3239_4216 | 316 |
| 185 | 3300039437 | Ga0436365_0570153 | Ga0436365_0570153_752_1726 | 316 |
| 186 | 3300039447 | Ga0436361_0010635 | Ga0436361_0010635_19489_20484 | 316 |
| 187 | 3300046455 | Ga0495603_0191693 | Ga0495603_0191693_187_1146 | 316 |
| 188 | 3300046459 | Ga0495629_0037159 | Ga0495629_0037159_1291_2307 | 316 |
| 189 | 3300046472 | Ga0495580_0027907 | Ga0495580_0027907_3069_4043 | 316 |
| 190 | 3300046473 | Ga0495582_0082232 | Ga0495582_0082232_739_1755 | 316 |
| 191 | 3300046475 | Ga0495639_0044235 | Ga0495639_0044235_113_1084 | 316 |
| 192 | 3300046499 | Ga0495594_0002139 | Ga0495594_0002139_3571_4530 | 316 |
| 193 | 3300046499 | Ga0495594_0082471 | Ga0495594_0082471_619_1635 | 316 |
| 194 | 3300046517 | Ga0495630_0003428 | Ga0495630_0003428_8108_9067 | 316 |
| 195 | 3300046517 | Ga0495630_0148187 | Ga0495630_0148187_285_1256 | 316 |
| 196 | 3300046533 | Ga0495640_0028430 | Ga0495640_0028430_1425_2384 | 316 |
| 197 | 3300046681 | Ga0495647_0005895 | Ga0495647_0005895_1431_2447 | 316 |
| 198 | 3300046683 | Ga0495658_0010540 | Ga0495658_0010540_2041_3057 | 316 |
| 199 | 3300046689 | Ga0495613_0006688 | Ga0495613_0006688_2968_3984 | 316 |
| 200 | 3300046689 | Ga0495613_0028188 | Ga0495613_0028188_162_1121 | 316 |
| 201 | 3300047315 | Ga0495581_0063069 | Ga0495581_0063069_89_1048 | 316 |
| 202 | 3300047315 | Ga0495581_0074571 | Ga0495581_0074571_225_1241 | 316 |
| 203 | 3300047319 | Ga0495674_0006547 | Ga0495674_0006547_7148_8107 | 316 |
| 204 | 3300047321 | Ga0495676_0031451 | Ga0495676_0031451_1694_2710 | 316 |
| 205 | 3300048904 | Ga0496101_0168160 | Ga0496101_0168160_690_1661 | 316 |
| 206 | 3300048907 | Ga0496104_0227825 | Ga0496104_0227825_584_1552 | 316 |
| 207 | 3300048915 | Ga0496112_0009838 | Ga0496112_0009838_6234_7205 | 316 |
| 208 | 3300048917 | Ga0496114_0060067 | Ga0496114_0060067_1325_2296 | 316 |
| 209 | 3300048918 | Ga0496115_0036979 | Ga0496115_0036979_42_1013 | 316 |
| 210 | 3300050513 | nmdc:mga0rr50_1675_c1 | nmdc:mga0rr50_1675_c1_1453_2421 | 316 |
| 211 | 3300053085 | Ga0495619_0204999 | Ga0495619_0204999_391_1350 | 316 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3w6v-assembly1.cif.gz_A | crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna | 0.9213 | 201 | 295 |
| 6swi-assembly1.cif.gz_A | the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus | 0.9194 | 201 | 295 |
| 3oio-assembly1.cif.gz_A | crystal structure of transcriptional regulator (arac-type dna-binding domain-containing proteins) from chromobacterium violaceum | 0.9136 | 200 | 295 |
| 3lsg-assembly3.cif.gz_E | the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 | 0.8985 | 205 | 293 |
| 3lsg-assembly1.cif.gz_A | the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 | 0.8952 | 205 | 295 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P32677_219_275_1.10.10.60 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.958 | 251 | 295 | 1.10.10.60 |
| af_P09377_170_274_1.10.10.60 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.9555 | 200 | 295 | 1.10.10.60 |
| 3lsgA02 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.9404 | 255 | 295 | 1.10.10.60 |
| af_P31449_179_288_1.10.10.60 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.9315 | 196 | 295 | 1.10.10.60 |
| af_Q59SD2_79_141_1.10.10.60 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.9293 | 198 | 255 | 1.10.10.60 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A239B962-F1-model_v4 | Transcriptional regulator, AraC family | 0.9661 | 198 | 295 |
GO:0003700
GO:0043565 |
| AF-R7LA95-F1-model_v4 | Transcriptional regulator AraC family | 0.9647 | 13 | 295 |
GO:0003700
GO:0043565 |
| AF-A0A2G2HKK0-F1-model_v4 | AraC family transcriptional regulator | 0.9577 | 15 | 295 |
GO:0003700
GO:0016020 GO:0043565 |
| AF-A0A1V2S9E3-F1-model_v4 | deleted | 0.9539 | 198 | 295 |
|
| AF-A0A3E0BXW3-F1-model_v4 | deleted | 0.9506 | 198 | 295 |
|
Predicted Structure (AlphaFold2)
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