F321255
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 211 | 148 | 192 | 422 |
Family's Representative Sequence
| Representative Sequence | 3300005347|Ga0070668_100062114|Ga0070668_1000621143 |
| Length | 444 |
| Sequence | VLNPPRRVDAGAVPGDIAKMNILVVGSGGREHALAWKIKQSPLVKRLVCAPGNPGMAALGEIRGVTATDVPALVALAQEIAADLVVVGPESALDLGLADRLAQAGIACFGHSRAAARIETSKAFLKDFAVRHGLPTARHGTFEKADEAKAFLDQFQAPYVIKADGLAAGKGVEIAQTRADAESAIDNMLDGRFGAAGARVVIEEFMAGEEASLFALSDGKTSLLFGGAQDHKRAYDGDQGPNTGGMGTYSPAPVLTDAIAALADARLIKPTIAGMIAEGCAPCGVLYAGLMIDGGAPRLVEYNARFGDPECQVLMLRLESDIVPYLVACANGTLADLPAPAWRSEAAICVVMAADGYPGSPVAGSIIRGADVDFGDAVTVFHAGTVRDPDGTLRAAGGRVLNVCARGATLSEARDAAYAAVEAIDWPAGFYRRDIGWRALKPGA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2534681786 | Brucella suis 92/29 | Isolate | Unclassified |
| 2 | 2643221588 | Altererythrobacter sp. Root672 | Isolate | Unclassified |
| 3 | 2643221598 | Phenylobacterium sp. Root700 | Isolate | Unclassified |
| 4 | 2643221614 | Phenylobacterium sp. Root77 | Isolate | Unclassified |
| 5 | 2643221661 | Phenylobacterium sp. Root1277 | Isolate | Unclassified |
| 6 | 2643221666 | Phenylobacterium sp. Root1290 | Isolate | Unclassified |
| 7 | 2738541275 | Novosphingobium sp. GV027 | Isolate | Unclassified |
| 8 | 2738541301 | Novosphingobium sp. GV079 | Isolate | Unclassified |
| 9 | 2738541304 | Novosphingobium sp. GV061 | Isolate | Unclassified |
| 10 | 2738543022 | Novosphingobium sp. GV055 | Isolate | Unclassified |
| 11 | 2738543033 | Novosphingobium sp. GV064 | Isolate | Unclassified |
| 12 | 2751185800 | Brucella pituitosa AA2 | Isolate | Unclassified |
| 13 | 2758568016 | [Ochrobactrum] quorumnocens A44 | Isolate | Rhizosphere |
| 14 | 2854911287 | Brucella lupini LUP21 | Isolate | Unclassified |
| 15 | 2896184354 | Aurantiacibacter suaedae GH3-15 | Isolate | Rhizosphere |
| 16 | 2915650412 | Ochrobactrum sp. CM-21-5 | Isolate | Rhizosphere |
| 17 | 2928100450 | Novosphingobium sp. 1529 | Isolate | Rhizosphere |
| 18 | 2928521798 | Phyllobacterium ifriqiyense 1451 | Isolate | Rhizosphere |
| 19 | 2928959182 | Novosphingobium capsulatum 1057 | Isolate | Unclassified |
| 20 | 3300002074 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 | Metagenome | Rhizosphere |
| 21 | 3300002239 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 | Metagenome | Rhizosphere |
| 22 | 3300003479 | Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_06_lowP_mix1_d1 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 23 | 3300003556 | Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_09_fullP_nobac_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 24 | 3300003558 | Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_10_fullP_mix1_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 25 | 3300003560 | Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_13_lowP_nobac_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 26 | 3300003561 | Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_01_fullP_nobac_d1 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 27 | 3300003564 | Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_05_lowP_nobac_d1 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 28 | 3300003565 | Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_16_lowP_mix3_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 29 | 3300003567 | Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_04_fullP_mix3_d1 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 30 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 31 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 32 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 33 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 34 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 36 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 40 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 42 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 44 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 45 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 46 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 47 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 48 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 49 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 50 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 51 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 52 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 54 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 56 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 65 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 66 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 69 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 94 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 95 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 96 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 97 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 98 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 99 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 100 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 101 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 102 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 103 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 116 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 117 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 118 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 119 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 120 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 121 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 122 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 123 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 124 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 125 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 126 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 127 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 128 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 129 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 135 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 136 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 137 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 138 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 139 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 140 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 141 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 142 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 143 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 144 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 145 | 3300053723 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere | Metagenome | Endosphere |
| 146 | 3300053729 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere | Metagenome | Endosphere |
| 147 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 148 | 3300053739 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 87.2 |
| Metatranscriptomes | 3.79 |
| Isolates | 9 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.37 |
| Nodule | 0.47 |
| Rhizoplane | 4.27 |
| Rhizosphere | 67.3 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 16.59 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24748J21848_1001549 | 3300002074 | Bacteria | 2553 |
| 2 | JGI24034J26672_10000684 | 3300002239 | Bacteria | 4362 |
| 3 | Ga0006556J51387_1019253 | 3300003479 | Eukaryota | 1808 |
| 4 | Ga0006557J51388_1018776 | 3300003556 | Eukaryota | 1800 |
| 5 | Ga0006558J51389_1018199 | 3300003558 | Eukaryota | 1722 |
| 6 | Ga0006559J51393_1019042 | 3300003560 | Eukaryota | 1752 |
| 7 | Ga0006553J51392_1018187 | 3300003561 | Eukaryota | 1817 |
| 8 | Ga0006555J51386_1018924 | 3300003564 | Eukaryota | 1771 |
| 9 | Ga0006560J51390_1018042 | 3300003565 | Eukaryota | 1755 |
| 10 | Ga0006554J51385_1018402 | 3300003567 | Eukaryota | 1770 |
| 11 | Ga0055530_10001223 | 3300003791 | Bacteria | 19641 |
| 12 | Ga0055531_10033975 | 3300003794 | Bacteria | 1629 |
| 13 | Ga0065165_1000030 | 3300005262 | Bacteria | 218104 |
| 14 | Ga0065704_10095201 | 3300005289 | Bacteria | 2500 |
| 15 | Ga0070670_100000013 | 3300005331 | Bacteria | 250768 |
| 16 | Ga0068868_100000020 | 3300005338 | Bacteria | 92590 |
| 17 | Ga0068868_100090928 | 3300005338 | Bacteria | 2459 |
| 18 | Ga0070660_100000304 | 3300005339 | Bacteria | 32718 |
| 19 | Ga0070668_100000219 | 3300005347 | Bacteria | 36854 |
| 20 | Ga0070668_100000387 | 3300005347 | Bacteria | 29141 |
| 21 | Ga0070668_100000507 | 3300005347 | Bacteria | 25756 |
| 22 | Ga0070668_100062114 | 3300005347 | Bacteria | 2894 |
| 23 | Ga0070668_100160982 | 3300005347 | Bacteria | 1821 |
| 24 | Ga0070669_100000056 | 3300005353 | Bacteria | 111413 |
| 25 | Ga0070671_100014061 | 3300005355 | Bacteria | 6462 |
| 26 | Ga0070671_100059530 | 3300005355 | Bacteria | 3179 |
| 27 | Ga0070671_100075639 | 3300005355 | Bacteria | 2813 |
| 28 | Ga0070659_100000017 | 3300005366 | Bacteria | 163966 |
| 29 | Ga0070667_100000217 | 3300005367 | Bacteria | 66847 |
| 30 | Ga0070667_100000230 | 3300005367 | Bacteria | 63814 |
| 31 | Ga0070667_100034955 | 3300005367 | Bacteria | 4208 |
| 32 | Ga0070678_100037884 | 3300005456 | Bacteria | 3390 |
| 33 | Ga0070665_100000564 | 3300005548 | Bacteria | 51696 |
| 34 | Ga0070665_100000759 | 3300005548 | Bacteria | 42667 |
| 35 | Ga0070665_100002064 | 3300005548 | Bacteria | 22547 |
| 36 | Ga0070665_100035518 | 3300005548 | Bacteria | 5013 |
| 37 | Ga0068855_100086504 | 3300005563 | Bacteria | 3625 |
| 38 | Ga0070664_100152919 | 3300005564 | Bacteria | 2038 |
| 39 | Ga0068859_100042841 | 3300005617 | Bacteria | 4548 |
| 40 | Ga0068864_100000232 | 3300005618 | Bacteria | 49886 |
| 41 | Ga0068864_100000265 | 3300005618 | Bacteria | 46817 |
| 42 | Ga0068864_100043435 | 3300005618 | Bacteria | 3848 |
| 43 | Ga0068864_100054909 | 3300005618 | Bacteria | 3438 |
| 44 | Ga0068863_100000086 | 3300005841 | Bacteria | 103855 |
| 45 | Ga0068863_100000220 | 3300005841 | Bacteria | 60987 |
| 46 | Ga0068863_100047485 | 3300005841 | Bacteria | 4072 |
| 47 | Ga0068863_100293381 | 3300005841 | Bacteria | 1576 |
| 48 | Ga0068858_100000408 | 3300005842 | Bacteria | 44660 |
| 49 | Ga0068858_100007391 | 3300005842 | Bacteria | 10626 |
| 50 | Ga0068860_100004678 | 3300005843 | Bacteria | 13976 |
| 51 | Ga0068862_100001952 | 3300005844 | Bacteria | 18698 |
| 52 | Ga0068862_100014229 | 3300005844 | Bacteria | 6598 |
| 53 | Ga0068862_100023115 | 3300005844 | Bacteria | 5206 |
| 54 | Ga0068862_100176567 | 3300005844 | Bacteria | 1915 |
| 55 | Ga0097621_100222800 | 3300006237 | Bacteria | 1644 |
| 56 | Ga0075370_10103824 | 3300006353 | Bacteria | 1647 |
| 57 | Ga0097620_100042841 | 3300006931 | Bacteria | 4548 |
| 58 | Ga0079104_1027264 | 3300006946 | Bacteria | 1466 |
| 59 | Ga0105250_10052014 | 3300009092 | Bacteria | 1643 |
| 60 | Ga0105240_10000449 | 3300009093 | Bacteria | 75827 |
| 61 | Ga0105248_10006766 | 3300009177 | Bacteria | 12571 |
| 62 | Ga0105248_10028188 | 3300009177 | Bacteria | 6254 |
| 63 | Ga0105248_10275211 | 3300009177 | Bacteria | 1895 |
| 64 | Ga0105248_10342645 | 3300009177 | Bacteria | 1683 |
| 65 | Ga0105249_10001078 | 3300009553 | Bacteria | 24235 |
| 66 | Ga0157374_10154270 | 3300013296 | Bacteria | 2234 |
| 67 | Ga0157375_10032764 | 3300013308 | Bacteria | 4931 |
| 68 | Ga0163163_10040976 | 3300014325 | Bacteria | 4526 |
| 69 | Ga0163163_10161563 | 3300014325 | Bacteria | 2286 |
| 70 | Ga0163163_10179798 | 3300014325 | Bacteria | 2162 |
| 71 | Ga0157379_10090783 | 3300014968 | Bacteria | 2740 |
| 72 | Ga0213876_10000341 | 3300021384 | Bacteria | 40559 |
| 73 | Ga0209026_1000539 | 3300025250 | Bacteria | 26079 |
| 74 | Ga0209758_1000516 | 3300025297 | Bacteria | 62036 |
| 75 | Ga0209050_1000090 | 3300025298 | Bacteria | 253783 |
| 76 | Ga0209257_1000059 | 3300025304 | Bacteria | 378097 |
| 77 | Ga0209257_1003785 | 3300025304 | Bacteria | 12469 |
| 78 | Ga0207696_1003857 | 3300025711 | Bacteria | 6646 |
| 79 | Ga0207713_1013789 | 3300025735 | Bacteria | 4237 |
| 80 | Ga0207680_10023689 | 3300025903 | Bacteria | 3357 |
| 81 | Ga0207680_10069233 | 3300025903 | Bacteria | 2180 |
| 82 | Ga0207657_10004255 | 3300025919 | Bacteria | 15165 |
| 83 | Ga0207681_10000019 | 3300025923 | Bacteria | 243902 |
| 84 | Ga0207681_10026646 | 3300025923 | Bacteria | 3731 |
| 85 | Ga0207694_10006265 | 3300025924 | Bacteria | 9086 |
| 86 | Ga0207694_10046998 | 3300025924 | Bacteria | 3338 |
| 87 | Ga0207650_10000016 | 3300025925 | Bacteria | 361958 |
| 88 | Ga0207659_10006109 | 3300025926 | Bacteria | 7358 |
| 89 | Ga0207644_10028344 | 3300025931 | Bacteria | 3876 |
| 90 | Ga0207644_10079735 | 3300025931 | Bacteria | 2416 |
| 91 | Ga0207690_10000035 | 3300025932 | Bacteria | 149201 |
| 92 | Ga0207706_10054998 | 3300025933 | Bacteria | 3512 |
| 93 | Ga0207711_10008659 | 3300025941 | Bacteria | 8509 |
| 94 | Ga0207711_10009930 | 3300025941 | Bacteria | 7913 |
| 95 | Ga0207711_10267587 | 3300025941 | Bacteria | 1572 |
| 96 | Ga0207689_10124162 | 3300025942 | Bacteria | 2124 |
| 97 | Ga0207712_10000748 | 3300025961 | Bacteria | 24619 |
| 98 | Ga0207668_10000019 | 3300025972 | Bacteria | 152108 |
| 99 | Ga0207668_10000884 | 3300025972 | Bacteria | 18097 |
| 100 | Ga0207668_10009280 | 3300025972 | Bacteria | 5887 |
| 101 | Ga0207668_10010956 | 3300025972 | Bacteria | 5496 |
| 102 | Ga0207668_10024368 | 3300025972 | Bacteria | 3904 |
| 103 | Ga0207658_10000193 | 3300025986 | Bacteria | 65400 |
| 104 | Ga0207658_10000230 | 3300025986 | Bacteria | 58983 |
| 105 | Ga0207677_10000224 | 3300026023 | Bacteria | 44846 |
| 106 | Ga0207703_10000171 | 3300026035 | Bacteria | 75791 |
| 107 | Ga0207703_10003133 | 3300026035 | Bacteria | 13967 |
| 108 | Ga0207641_10000007 | 3300026088 | Bacteria | 441443 |
| 109 | Ga0207676_10000215 | 3300026095 | Bacteria | 49880 |
| 110 | Ga0207676_10061060 | 3300026095 | Bacteria | 2983 |
| 111 | Ga0207676_10139687 | 3300026095 | Bacteria | 2072 |
| 112 | Ga0207683_10049415 | 3300026121 | Bacteria | 3682 |
| 113 | Ga0268266_10002144 | 3300028379 | Bacteria | 21695 |
| 114 | Ga0268266_10004647 | 3300028379 | Bacteria | 13092 |
| 115 | Ga0268265_10001449 | 3300028380 | Bacteria | 19990 |
| 116 | Ga0268265_10019757 | 3300028380 | Bacteria | 4689 |
| 117 | Ga0268265_10020011 | 3300028380 | Bacteria | 4664 |
| 118 | Ga0268265_10059124 | 3300028380 | Bacteria | 2931 |
| 119 | Ga0268264_10000008 | 3300028381 | Bacteria | 773387 |
| 120 | Ga0268264_10000068 | 3300028381 | Bacteria | 275708 |
| 121 | Ga0268264_10014031 | 3300028381 | Bacteria | 6587 |
| 122 | Ga0307517_10006713 | 3300028786 | Bacteria | 16943 |
| 123 | Ga0307517_10058343 | 3300028786 | Bacteria | 3721 |
| 124 | Ga0307517_10072067 | 3300028786 | Bacteria | 3085 |
| 125 | Ga0265327_10000198 | 3300031251 | Bacteria | 126077 |
| 126 | Ga0307513_10000045 | 3300031456 | Bacteria | 158626 |
| 127 | Ga0307513_10003803 | 3300031456 | Bacteria | 20342 |
| 128 | Ga0307513_10026601 | 3300031456 | Bacteria | 6665 |
| 129 | Ga0307516_10000001 | 3300031730 | Bacteria | 510338 |
| 130 | Ga0307510_10028769 | 3300033180 | Bacteria | 6342 |
| 131 | Ga0373946_0058915 | 3300035171 | Bacteria | 1628 |
| 132 | Ga0373927_0000880 | 3300035695 | Bacteria | 22844 |
| 133 | Ga0373925_0001027 | 3300037068 | Bacteria | 25268 |
| 134 | Ga0395905_0000593 | 3300037471 | Bacteria | 48559 |
| 135 | Ga0395905_0125618 | 3300037471 | Bacteria | 2412 |
| 136 | Ga0436365_1702191 | 3300039437 | Bacteria | 116634 |
| 137 | Ga0495583_0029144 | 3300046506 | Bacteria | 2704 |
| 138 | Ga0495610_0026471 | 3300046512 | Bacteria | 3096 |
| 139 | Ga0495643_0016050 | 3300046522 | Bacteria | 4408 |
| 140 | Ga0495642_0007176 | 3300046528 | Bacteria | 4277 |
| 141 | Ga0495597_0003851 | 3300046542 | Bacteria | 8508 |
| 142 | Ga0495622_0001663 | 3300046557 | Bacteria | 11002 |
| 143 | Ga0495668_0039401 | 3300046616 | Bacteria | 2638 |
| 144 | Ga0495668_0049844 | 3300046616 | Bacteria | 2322 |
| 145 | Ga0495611_0003336 | 3300046648 | Bacteria | 7090 |
| 146 | Ga0495625_0033478 | 3300046660 | Bacteria | 3800 |
| 147 | Ga0495669_0000087 | 3300046684 | Bacteria | 61330 |
| 148 | Ga0495669_0000141 | 3300046684 | Bacteria | 45672 |
| 149 | Ga0495669_0042692 | 3300046684 | Bacteria | 2017 |
| 150 | Ga0495687_043084 | 3300047443 | Bacteria | 1968 |
| 151 | Ga0495686_0010059 | 3300047472 | Bacteria | 6757 |
| 152 | Ga0495686_0092150 | 3300047472 | Bacteria | 1838 |
| 153 | Ga0496100_0111100 | 3300048903 | Bacteria | 1904 |
| 154 | Ga0496101_0003454 | 3300048904 | Bacteria | 9855 |
| 155 | Ga0496102_0000432 | 3300048905 | Bacteria | 48412 |
| 156 | Ga0496103_0000617 | 3300048906 | Bacteria | 27591 |
| 157 | Ga0496104_0011400 | 3300048907 | Bacteria | 7958 |
| 158 | Ga0496112_0053108 | 3300048915 | Bacteria | 3979 |
| 159 | Ga0496112_0147047 | 3300048915 | Bacteria | 2325 |
| 160 | Ga0496113_0026401 | 3300048916 | Bacteria | 4152 |
| 161 | Ga0496113_0038414 | 3300048916 | Bacteria | 3520 |
| 162 | Ga0496117_0006193 | 3300048920 | Bacteria | 12205 |
| 163 | Ga0496117_0007963 | 3300048920 | Bacteria | 10179 |
| 164 | Ga0496118_0012591 | 3300048921 | Bacteria | 8097 |
| 165 | Ga0496118_0036766 | 3300048921 | Bacteria | 3952 |
| 166 | Ga0496119_0048708 | 3300048922 | Bacteria | 2625 |
| 167 | Ga0496121_0000467 | 3300048924 | Bacteria | 78851 |
| 168 | Ga0496121_0033566 | 3300048924 | Bacteria | 4640 |
| 169 | Ga0496122_0011828 | 3300048925 | Bacteria | 8774 |
| 170 | Ga0496124_0003006 | 3300048927 | Bacteria | 21092 |
| 171 | Ga0496126_0000051 | 3300048929 | Bacteria | 313169 |
| 172 | Ga0501033_0080524 | 3300049570 | Bacteria | 2390 |
| 173 | Ga0501034_0112555 | 3300049571 | Bacteria | 2712 |
| 174 | Ga0501047_0000963 | 3300049581 | Bacteria | 29103 |
| 175 | Ga0501035_0043791 | 3300049822 | Bacteria | 4033 |
| 176 | Ga0501044_0001576 | 3300049823 | Bacteria | 26677 |
| 177 | Ga0500635_0000158 | 3300053080 | Bacteria | 37145 |
| 178 | Ga0500644_0021967 | 3300053088 | Eukaryota | 1919 |
| 179 | Ga0500641_0000457 | 3300053096 | Bacteria | 14851 |
| 180 | Ga0500562_001064 | 3300053108 | Bacteria | 6747 |
| 181 | Ga0500562_004113 | 3300053108 | Bacteria | 3668 |
| 182 | Ga0500608_011111 | 3300053122 | Bacteria | 3896 |
| 183 | Ga0500559_0022482 | 3300053136 | Bacteria | 2674 |
| 184 | Ga0500568_0001337 | 3300053139 | Bacteria | 16149 |
| 185 | Ga0500604_0000055 | 3300053151 | Bacteria | 41071 |
| 186 | Ga0500616_0000137 | 3300053153 | Bacteria | 124573 |
| 187 | Ga0500622_0011324 | 3300053156 | Bacteria | 4863 |
| 188 | Ga0500637_0006717 | 3300053178 | Bacteria | 5692 |
| 189 | Ga0500567_005353 | 3300053723 | Bacteria | 5918 |
| 190 | Ga0500625_000014 | 3300053729 | Bacteria | 109364 |
| 191 | Ga0500645_000940 | 3300053730 | Bacteria | 16583 |
| 192 | Ga0500587_001248 | 3300053739 | Bacteria | 3546 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300053088 | Ga0500644_0021967 | Ga0500644_0021967_494_1618 | 363 |
| 2 | 3300046616 | Ga0495668_0049844 | Ga0495668_0049844_1107_2270 | 387 |
| 3 | 3300005548 | Ga0070665_100000564 | Ga0070665_10000056431 | 393 |
| 4 | 3300028379 | Ga0268266_10004647 | Ga0268266_1000464710 | 393 |
| 5 | 3300049570 | Ga0501033_0080524 | Ga0501033_0080524_784_2049 | 393 |
| 6 | 3300005339 | Ga0070660_100000304 | Ga0070660_10000030416 | 399 |
| 7 | 3300005366 | Ga0070659_100000017 | Ga0070659_10000001777 | 399 |
| 8 | 3300025919 | Ga0207657_10004255 | Ga0207657_1000425518 | 399 |
| 9 | 3300025932 | Ga0207690_10000035 | Ga0207690_1000003578 | 399 |
| 10 | 3300047472 | Ga0495686_0092150 | Ga0495686_0092150_161_1423 | 400 |
| 11 | 3300046684 | Ga0495669_0000141 | Ga0495669_0000141_22714_23985 | 402 |
| 12 | 3300049571 | Ga0501034_0112555 | Ga0501034_0112555_1368_2639 | 403 |
| 13 | 3300025942 | Ga0207689_10124162 | Ga0207689_101241622 | 404 |
| 14 | 3300053156 | Ga0500622_0011324 | Ga0500622_0011324_1913_3190 | 404 |
| 15 | 3300005338 | Ga0068868_100000020 | Ga0068868_10000002069 | 409 |
| 16 | 3300026023 | Ga0207677_10000224 | Ga0207677_1000022438 | 409 |
| 17 | 3300047472 | Ga0495686_0010059 | Ga0495686_0010059_837_2105 | 411 |
| 18 | 3300025250 | Ga0209026_1000539 | Ga0209026_100053921 | 416 |
| 19 | 3300025924 | Ga0207694_10006265 | Ga0207694_100062652 | 416 |
| 20 | 3300003791 | Ga0055530_10001223 | Ga0055530_100012237 | 417 |
| 21 | 3300003794 | Ga0055531_10033975 | Ga0055531_100339751 | 417 |
| 22 | 3300005262 | Ga0065165_1000030 | Ga0065165_1000030175 | 417 |
| 23 | 3300005844 | Ga0068862_100014229 | Ga0068862_1000142292 | 417 |
| 24 | 3300025297 | Ga0209758_1000516 | Ga0209758_100051623 | 417 |
| 25 | 3300025298 | Ga0209050_1000090 | Ga0209050_100009057 | 417 |
| 26 | 3300025304 | Ga0209257_1000059 | Ga0209257_10000594 | 417 |
| 27 | 3300025926 | Ga0207659_10006109 | Ga0207659_100061095 | 417 |
| 28 | 3300028380 | Ga0268265_10020011 | Ga0268265_100200112 | 417 |
| 29 | 3300037471 | Ga0395905_0000593 | Ga0395905_0000593_44009_45274 | 417 |
| 30 | 3300037471 | Ga0395905_0125618 | Ga0395905_0125618_82_1347 | 417 |
| 31 | 3300049822 | Ga0501035_0043791 | Ga0501035_0043791_2292_3557 | 417 |
| 32 | 3300053096 | Ga0500641_0000457 | Ga0500641_0000457_9322_10587 | 417 |
| 33 | 3300021384 | Ga0213876_10000341 | Ga0213876_1000034120 | 418 |
| 34 | 3300025304 | Ga0209257_1003785 | Ga0209257_10037855 | 418 |
| 35 | 3300031251 | Ga0265327_10000198 | Ga0265327_1000019869 | 418 |
| 36 | 3300039437 | Ga0436365_1702191 | Ga0436365_1702191_75200_76468 | 418 |
| 37 | 3300049823 | Ga0501044_0001576 | Ga0501044_0001576_22270_23538 | 418 |
| 38 | 3300053108 | Ga0500562_001064 | Ga0500562_001064_873_2141 | 418 |
| 39 | 3300053139 | Ga0500568_0001337 | Ga0500568_0001337_6231_7508 | 418 |
| 40 | 3300053151 | Ga0500604_0000055 | Ga0500604_0000055_7993_9270 | 418 |
| 41 | 3300053153 | Ga0500616_0000137 | Ga0500616_0000137_11279_12556 | 418 |
| 42 | 3300053730 | Ga0500645_000940 | Ga0500645_000940_4810_6078 | 418 |
| 43 | 3300053739 | Ga0500587_001248 | Ga0500587_001248_1788_3065 | 418 |
| 44 | iso_pu_bacteria | 2738541275 | 2738710488 | 418 |
| 45 | iso_pu_bacteria | 2738541301 | 2738848913 | 418 |
| 46 | iso_pu_bacteria | 2738541304 | 2738864642 | 418 |
| 47 | iso_pu_bacteria | 2738543022 | 2739297160 | 418 |
| 48 | iso_pu_bacteria | 2738543033 | 2739358838 | 418 |
| 49 | 3300005331 | Ga0070670_100000013 | Ga0070670_10000001389 | 419 |
| 50 | 3300005338 | Ga0068868_100090928 | Ga0068868_1000909283 | 419 |
| 51 | 3300005347 | Ga0070668_100000219 | Ga0070668_10000021925 | 419 |
| 52 | 3300005347 | Ga0070668_100000387 | Ga0070668_1000003877 | 419 |
| 53 | 3300005347 | Ga0070668_100160982 | Ga0070668_1001609821 | 419 |
| 54 | 3300005355 | Ga0070671_100059530 | Ga0070671_1000595302 | 419 |
| 55 | 3300005355 | Ga0070671_100075639 | Ga0070671_1000756393 | 419 |
| 56 | 3300005367 | Ga0070667_100000217 | Ga0070667_10000021725 | 419 |
| 57 | 3300005367 | Ga0070667_100034955 | Ga0070667_1000349552 | 419 |
| 58 | 3300005456 | Ga0070678_100037884 | Ga0070678_1000378842 | 419 |
| 59 | 3300005548 | Ga0070665_100000759 | Ga0070665_10000075935 | 419 |
| 60 | 3300005563 | Ga0068855_100086504 | Ga0068855_1000865043 | 419 |
| 61 | 3300005564 | Ga0070664_100152919 | Ga0070664_1001529193 | 419 |
| 62 | 3300005617 | Ga0068859_100042841 | Ga0068859_1000428415 | 419 |
| 63 | 3300005618 | Ga0068864_100000232 | Ga0068864_10000023221 | 419 |
| 64 | 3300005618 | Ga0068864_100000265 | Ga0068864_10000026551 | 419 |
| 65 | 3300005618 | Ga0068864_100043435 | Ga0068864_1000434353 | 419 |
| 66 | 3300005841 | Ga0068863_100000086 | Ga0068863_10000008681 | 419 |
| 67 | 3300005841 | Ga0068863_100000220 | Ga0068863_10000022010 | 419 |
| 68 | 3300005841 | Ga0068863_100047485 | Ga0068863_1000474853 | 419 |
| 69 | 3300005841 | Ga0068863_100293381 | Ga0068863_1002933811 | 419 |
| 70 | 3300005842 | Ga0068858_100000408 | Ga0068858_1000004081 | 419 |
| 71 | 3300005842 | Ga0068858_100007391 | Ga0068858_1000073917 | 419 |
| 72 | 3300005843 | Ga0068860_100004678 | Ga0068860_10000467811 | 419 |
| 73 | 3300005844 | Ga0068862_100001952 | Ga0068862_1000019527 | 419 |
| 74 | 3300005844 | Ga0068862_100023115 | Ga0068862_1000231155 | 419 |
| 75 | 3300005844 | Ga0068862_100176567 | Ga0068862_1001765672 | 419 |
| 76 | 3300006237 | Ga0097621_100222800 | Ga0097621_1002228001 | 419 |
| 77 | 3300006931 | Ga0097620_100042841 | Ga0097620_1000428415 | 419 |
| 78 | 3300006946 | Ga0079104_1027264 | Ga0079104_10272641 | 419 |
| 79 | 3300009092 | Ga0105250_10052014 | Ga0105250_100520141 | 419 |
| 80 | 3300009093 | Ga0105240_10000449 | Ga0105240_1000044917 | 419 |
| 81 | 3300009177 | Ga0105248_10006766 | Ga0105248_1000676612 | 419 |
| 82 | 3300009177 | Ga0105248_10028188 | Ga0105248_100281883 | 419 |
| 83 | 3300009177 | Ga0105248_10275211 | Ga0105248_102752111 | 419 |
| 84 | 3300009177 | Ga0105248_10342645 | Ga0105248_103426451 | 419 |
| 85 | 3300009553 | Ga0105249_10001078 | Ga0105249_100010787 | 419 |
| 86 | 3300013296 | Ga0157374_10154270 | Ga0157374_101542702 | 419 |
| 87 | 3300013308 | Ga0157375_10032764 | Ga0157375_100327645 | 419 |
| 88 | 3300014325 | Ga0163163_10040976 | Ga0163163_100409762 | 419 |
| 89 | 3300014325 | Ga0163163_10161563 | Ga0163163_101615632 | 419 |
| 90 | 3300014325 | Ga0163163_10179798 | Ga0163163_101797981 | 419 |
| 91 | 3300014968 | Ga0157379_10090783 | Ga0157379_100907833 | 419 |
| 92 | 3300025903 | Ga0207680_10023689 | Ga0207680_100236892 | 419 |
| 93 | 3300025923 | Ga0207681_10026646 | Ga0207681_100266462 | 419 |
| 94 | 3300025924 | Ga0207694_10046998 | Ga0207694_100469983 | 419 |
| 95 | 3300025925 | Ga0207650_10000016 | Ga0207650_10000016275 | 419 |
| 96 | 3300025931 | Ga0207644_10028344 | Ga0207644_100283444 | 419 |
| 97 | 3300025931 | Ga0207644_10079735 | Ga0207644_100797352 | 419 |
| 98 | 3300025933 | Ga0207706_10054998 | Ga0207706_100549982 | 419 |
| 99 | 3300025941 | Ga0207711_10008659 | Ga0207711_100086597 | 419 |
| 100 | 3300025941 | Ga0207711_10009930 | Ga0207711_100099304 | 419 |
| 101 | 3300025941 | Ga0207711_10267587 | Ga0207711_102675872 | 419 |
| 102 | 3300025961 | Ga0207712_10000748 | Ga0207712_1000074816 | 419 |
| 103 | 3300025972 | Ga0207668_10000019 | Ga0207668_1000001912 | 419 |
| 104 | 3300025972 | Ga0207668_10000884 | Ga0207668_1000088412 | 419 |
| 105 | 3300025972 | Ga0207668_10009280 | Ga0207668_100092804 | 419 |
| 106 | 3300025986 | Ga0207658_10000193 | Ga0207658_1000019345 | 419 |
| 107 | 3300026035 | Ga0207703_10000171 | Ga0207703_1000017146 | 419 |
| 108 | 3300026035 | Ga0207703_10003133 | Ga0207703_100031339 | 419 |
| 109 | 3300026088 | Ga0207641_10000007 | Ga0207641_10000007348 | 419 |
| 110 | 3300026095 | Ga0207676_10000215 | Ga0207676_1000021529 | 419 |
| 111 | 3300026095 | Ga0207676_10061060 | Ga0207676_100610603 | 419 |
| 112 | 3300026095 | Ga0207676_10139687 | Ga0207676_101396871 | 419 |
| 113 | 3300026121 | Ga0207683_10049415 | Ga0207683_100494153 | 419 |
| 114 | 3300028380 | Ga0268265_10001449 | Ga0268265_100014497 | 419 |
| 115 | 3300028380 | Ga0268265_10059124 | Ga0268265_100591241 | 419 |
| 116 | 3300028381 | Ga0268264_10000008 | Ga0268264_10000008455 | 419 |
| 117 | 3300028381 | Ga0268264_10000068 | Ga0268264_10000068228 | 419 |
| 118 | 3300028786 | Ga0307517_10006713 | Ga0307517_1000671314 | 419 |
| 119 | 3300028786 | Ga0307517_10058343 | Ga0307517_100583433 | 419 |
| 120 | 3300028786 | Ga0307517_10072067 | Ga0307517_100720671 | 419 |
| 121 | 3300031456 | Ga0307513_10000045 | Ga0307513_1000004574 | 419 |
| 122 | 3300031456 | Ga0307513_10003803 | Ga0307513_1000380314 | 419 |
| 123 | 3300031456 | Ga0307513_10026601 | Ga0307513_100266016 | 419 |
| 124 | 3300031730 | Ga0307516_10000001 | Ga0307516_10000001109 | 419 |
| 125 | 3300033180 | Ga0307510_10028769 | Ga0307510_100287692 | 419 |
| 126 | 3300035171 | Ga0373946_0058915 | Ga0373946_0058915_315_1586 | 419 |
| 127 | 3300035695 | Ga0373927_0000880 | Ga0373927_0000880_7948_9219 | 419 |
| 128 | 3300037068 | Ga0373925_0001027 | Ga0373925_0001027_10495_11766 | 419 |
| 129 | 3300046506 | Ga0495583_0029144 | Ga0495583_0029144_849_2120 | 419 |
| 130 | 3300046512 | Ga0495610_0026471 | Ga0495610_0026471_446_1717 | 419 |
| 131 | 3300046522 | Ga0495643_0016050 | Ga0495643_0016050_3082_4353 | 419 |
| 132 | 3300046528 | Ga0495642_0007176 | Ga0495642_0007176_2235_3506 | 419 |
| 133 | 3300046542 | Ga0495597_0003851 | Ga0495597_0003851_6886_8157 | 419 |
| 134 | 3300046557 | Ga0495622_0001663 | Ga0495622_0001663_6788_8059 | 419 |
| 135 | 3300046616 | Ga0495668_0039401 | Ga0495668_0039401_375_1646 | 419 |
| 136 | 3300046648 | Ga0495611_0003336 | Ga0495611_0003336_5075_6346 | 419 |
| 137 | 3300046660 | Ga0495625_0033478 | Ga0495625_0033478_683_1954 | 419 |
| 138 | 3300046684 | Ga0495669_0000087 | Ga0495669_0000087_13790_15061 | 419 |
| 139 | 3300046684 | Ga0495669_0042692 | Ga0495669_0042692_73_1344 | 419 |
| 140 | 3300047443 | Ga0495687_043084 | Ga0495687_043084_212_1483 | 419 |
| 141 | 3300048903 | Ga0496100_0111100 | Ga0496100_0111100_361_1632 | 419 |
| 142 | 3300048915 | Ga0496112_0053108 | Ga0496112_0053108_2027_3298 | 419 |
| 143 | 3300048916 | Ga0496113_0038414 | Ga0496113_0038414_20_1291 | 419 |
| 144 | 3300048920 | Ga0496117_0007963 | Ga0496117_0007963_4173_5444 | 419 |
| 145 | 3300048921 | Ga0496118_0036766 | Ga0496118_0036766_320_1591 | 419 |
| 146 | 3300048924 | Ga0496121_0000467 | Ga0496121_0000467_46192_47463 | 419 |
| 147 | 3300049581 | Ga0501047_0000963 | Ga0501047_0000963_23983_25254 | 419 |
| 148 | 3300053080 | Ga0500635_0000158 | Ga0500635_0000158_31355_32626 | 419 |
| 149 | 3300053108 | Ga0500562_004113 | Ga0500562_004113_1156_2427 | 419 |
| 150 | 3300053122 | Ga0500608_011111 | Ga0500608_011111_2522_3793 | 419 |
| 151 | 3300053178 | Ga0500637_0006717 | Ga0500637_0006717_2954_4225 | 419 |
| 152 | iso_pu_bacteria | 2534681786 | 2535484179 | 419 |
| 153 | iso_pu_bacteria | 2643221598 | 2643997826 | 420 |
| 154 | iso_pu_bacteria | 2643221614 | 2644086877 | 420 |
| 155 | iso_pu_bacteria | 2643221661 | 2644341831 | 420 |
| 156 | iso_pu_bacteria | 2643221666 | 2644368118 | 420 |
| 157 | iso_pu_bacteria | 2751185800 | 2753358767 | 420 |
| 158 | iso_pu_bacteria | 2758568016 | 2758640999 | 420 |
| 159 | iso_pu_bacteria | 2854911287 | 2854914345 | 420 |
| 160 | iso_pu_bacteria | 2896184354 | 2896186206 | 420 |
| 161 | iso_pu_bacteria | 2915650412 | 2915651228 | 420 |
| 162 | iso_pu_bacteria | 2928521798 | 2928526262 | 420 |
| 163 | 3300003479 | Ga0006556J51387_1019253 | Ga0006556J51387_10192532 | 421 |
| 164 | 3300003556 | Ga0006557J51388_1018776 | Ga0006557J51388_10187762 | 421 |
| 165 | 3300003558 | Ga0006558J51389_1018199 | Ga0006558J51389_10181992 | 421 |
| 166 | 3300003560 | Ga0006559J51393_1019042 | Ga0006559J51393_10190422 | 421 |
| 167 | 3300003561 | Ga0006553J51392_1018187 | Ga0006553J51392_10181872 | 421 |
| 168 | 3300003564 | Ga0006555J51386_1018924 | Ga0006555J51386_10189242 | 421 |
| 169 | 3300003565 | Ga0006560J51390_1018042 | Ga0006560J51390_10180422 | 421 |
| 170 | 3300003567 | Ga0006554J51385_1018402 | Ga0006554J51385_10184022 | 421 |
| 171 | 3300005347 | Ga0070668_100062114 | Ga0070668_1000621143 | 421 |
| 172 | 3300025972 | Ga0207668_10010956 | Ga0207668_100109562 | 421 |
| 173 | 3300002074 | JGI24748J21848_1001549 | JGI24748J21848_10015492 | 422 |
| 174 | 3300002239 | JGI24034J26672_10000684 | JGI24034J26672_100006843 | 422 |
| 175 | 3300005289 | Ga0065704_10095201 | Ga0065704_100952011 | 422 |
| 176 | 3300005347 | Ga0070668_100000507 | Ga0070668_10000050712 | 422 |
| 177 | 3300005353 | Ga0070669_100000056 | Ga0070669_10000005632 | 422 |
| 178 | 3300005355 | Ga0070671_100014061 | Ga0070671_1000140615 | 422 |
| 179 | 3300005367 | Ga0070667_100000230 | Ga0070667_10000023048 | 422 |
| 180 | 3300005548 | Ga0070665_100002064 | Ga0070665_1000020645 | 422 |
| 181 | 3300005548 | Ga0070665_100035518 | Ga0070665_1000355185 | 422 |
| 182 | 3300005618 | Ga0068864_100054909 | Ga0068864_1000549094 | 422 |
| 183 | 3300006353 | Ga0075370_10103824 | Ga0075370_101038242 | 422 |
| 184 | 3300025711 | Ga0207696_1003857 | Ga0207696_10038574 | 422 |
| 185 | 3300025735 | Ga0207713_1013789 | Ga0207713_10137893 | 422 |
| 186 | 3300025903 | Ga0207680_10069233 | Ga0207680_100692332 | 422 |
| 187 | 3300025923 | Ga0207681_10000019 | Ga0207681_10000019160 | 422 |
| 188 | 3300025972 | Ga0207668_10024368 | Ga0207668_100243684 | 422 |
| 189 | 3300025986 | Ga0207658_10000230 | Ga0207658_1000023048 | 422 |
| 190 | 3300028379 | Ga0268266_10002144 | Ga0268266_100021447 | 422 |
| 191 | 3300028380 | Ga0268265_10019757 | Ga0268265_100197572 | 422 |
| 192 | 3300028381 | Ga0268264_10014031 | Ga0268264_100140315 | 422 |
| 193 | 3300048904 | Ga0496101_0003454 | Ga0496101_0003454_611_1891 | 422 |
| 194 | 3300048905 | Ga0496102_0000432 | Ga0496102_0000432_39253_40533 | 422 |
| 195 | 3300048906 | Ga0496103_0000617 | Ga0496103_0000617_7808_9088 | 422 |
| 196 | 3300048907 | Ga0496104_0011400 | Ga0496104_0011400_5003_6283 | 422 |
| 197 | 3300048915 | Ga0496112_0147047 | Ga0496112_0147047_914_2194 | 422 |
| 198 | 3300048916 | Ga0496113_0026401 | Ga0496113_0026401_2107_3387 | 422 |
| 199 | 3300048920 | Ga0496117_0006193 | Ga0496117_0006193_3046_4326 | 422 |
| 200 | 3300048921 | Ga0496118_0012591 | Ga0496118_0012591_6424_7704 | 422 |
| 201 | 3300048922 | Ga0496119_0048708 | Ga0496119_0048708_363_1643 | 422 |
| 202 | 3300048924 | Ga0496121_0033566 | Ga0496121_0033566_1087_2367 | 422 |
| 203 | 3300048925 | Ga0496122_0011828 | Ga0496122_0011828_7023_8303 | 422 |
| 204 | 3300048927 | Ga0496124_0003006 | Ga0496124_0003006_15746_17026 | 422 |
| 205 | 3300048929 | Ga0496126_0000051 | Ga0496126_0000051_203759_205039 | 422 |
| 206 | 3300053136 | Ga0500559_0022482 | Ga0500559_0022482_477_1763 | 422 |
| 207 | 3300053723 | Ga0500567_005353 | Ga0500567_005353_3017_4303 | 422 |
| 208 | 3300053729 | Ga0500625_000014 | Ga0500625_000014_36522_37808 | 422 |
| 209 | iso_pu_bacteria | 2643221588 | 2643951150 | 422 |
| 210 | iso_pu_bacteria | 2928100450 | 2928100588 | 422 |
| 211 | iso_pu_bacteria | 2928959182 | 2928960651 | 422 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3lp8-assembly1.cif.gz_A | crystal structure of phosphoribosylamine-glycine ligase from ehrlichia chaffeensis | 0.9587 | 2 | 413 |
| 2xd4-assembly1.cif.gz_A | nucleotide-bound structures of bacillus subtilis glycinamide ribonucleotide synthetase | 0.9559 | 2 | 418 |
| 2qk4-assembly1.cif.gz_A | human glycinamide ribonucleotide synthetase | 0.9543 | 2 | 418 |
| 2yw2-assembly1.cif.gz_A | crystal structure of gar synthetase from aquifex aeolicus in complex with atp | 0.9528 | 2 | 415 |
| 2qk4-assembly2.cif.gz_B | human glycinamide ribonucleotide synthetase | 0.9517 | 2 | 420 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_C0PFX3_419_522_3.90.600.10 | Alpha Beta;Alpha-Beta Complex;Glycinamide Ribonucleotide Synthetase; Chain A, domain 4;Phosphoribosylglycinamide synthetase, C-terminal domain | 0.9809 | 326 | 421 | 3.90.600.10 |
| af_P9WHM9_188_326_3.30.470.20 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9686 | 184 | 320 | 3.30.470.20 |
| af_P22102_333_434_3.90.600.10 | Alpha Beta;Alpha-Beta Complex;Glycinamide Ribonucleotide Synthetase; Chain A, domain 4;Phosphoribosylglycinamide synthetase, C-terminal domain | 0.9642 | 324 | 422 | 3.90.600.10 |
| 2ip4B03 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9612 | 184 | 320 | 3.30.470.20 |
| 2yw2A03 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9609 | 184 | 321 | 3.30.470.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A5B8LJN4-F1-model_v4 | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) | 0.9833 | 2 | 420 |
GO:0004637
GO:0005524 GO:0006189 GO:0009113 GO:0046872 |
| AF-A0A520YCJ3-F1-model_v4 | phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) | 0.9811 | 250 | 420 |
GO:0004637
GO:0005524 GO:0006189 GO:0009113 GO:0046872 |
| AF-A0A061E430-F1-model_v4 | phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) | 0.9808 | 2 | 415 |
GO:0004637
GO:0005524 GO:0006189 GO:0009113 GO:0046872 |
| AF-A0A2P5BIY7-F1-model_v4 | phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) | 0.9804 | 2 | 416 |
GO:0004637
GO:0005524 GO:0006189 GO:0009113 GO:0046872 |
| AF-A0A2N6AZ33-F1-model_v4 | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) | 0.9802 | 2 | 418 |
GO:0004637
GO:0005524 GO:0006189 GO:0009113 GO:0046872 |
Predicted Structure (AlphaFold2)
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