F321039

General Info

Members Datasets Scaffolds Average Seq Length
210 114 168 446

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8054844752|8054848058
Length 480
Sequence YVEPLFHPFLSPETSMKQEPELRLRAGGDPRTLPDYAALRDELSKLTHPARPDVNWSYAEKLCLSLFETNGVEMQTAAWYTLARTHLAGLYGLNEGLRILEALIASQWSSLWPQPVHARMEILNGLGKHLLHTMRSLTLTYADMDQLERAEQLLAHLGDGLQRLELGRLSQLDILRTLMHNTALRLQKSDNVAGSDNGMPQNIALPAGIADVPQIPLPGDRTFSEQTRQVYATPSEPQPDVEVVKGSPVSTKPWKSFAAGMCTMLLISGAAFLGWQYFFQPDPLQMQLAESLAPLPVTLTPVQQQALRRQSLPSETFITDTQQQLARLGQLSPGWNIDYARQLIEQAQTLWPEQAKPLALQWRQQLNAAAIPAEKLDGWRQGMMTLQQLSDRLNGLDEQKGKYMTVSELKSVVFATVQAFSHTIPAEEQLRLLAQTPSGQPLPVAARVQIETRLRQLIARYTLLTHAGIQIAPIQQKADY

Samples

Sample ID Description Type Environment
1 2010549000 Rice roots microbial communities from plants at IRRI, Los Banos, Philippines - endophytes Metagenome Endosphere
2 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
3 2547132181 Kosakonia sacchari SP1 Isolate Stem
4 2547132416 Enterobacter sp. MR1 Isolate Rhizoplane
5 2561511199 Enterobacter sp. R4-368 Isolate Nodule
6 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
7 2602042047 Enterobacter sp. NFIX59 Isolate Rhizoplane
8 2602042066 Enterobacter sp. NFIX45 Isolate Rhizoplane
9 2602042067 Enterobacter sp. NFIX58 Isolate Rhizoplane
10 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
11 2608642108 Pantoea agglomerans NFPP29 Isolate Rhizoplane
12 2667528172 Enterobacteriaceae bacterium NFIX31 Isolate Rhizoplane
13 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
14 2681812869 Enterobacter ludwigii NFPP41 Isolate Rhizoplane
15 2684622997 Pantoea ananatis NFIX48 Isolate Rhizoplane
16 2765235842 Enterobacter ludwigii AA4 Isolate Unclassified
17 2791355275 Enterobacter sp. Sa187 Isolate Unclassified
18 2808606414 Pantoea sp. SJZ147 Isolate Rhizosphere
19 2821118458 Enterobacter asburiae 609 Isolate Unclassified
20 2823373977 Enterobacter ludwigii NCR3 Isolate Rhizosphere
21 2844528606 Pantoea sp. R-72498 v. 2 Isolate Unclassified
22 2847797336 Pantoea ananatis NN08200 Isolate Unclassified
23 2865014394 Pantoea sp. R-71966 Isolate Unclassified
24 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
25 2881609920 Pantoea sp. ARC607 Isolate Rhizosphere
26 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
27 2891670763 Buttiauxella sp. B2 Isolate Rhizosphere
28 2923634449 Enterobacter kobei SLBN-76 Isolate Rhizosphere
29 2927833300 Enterobacter sp. SLBN-59 Isolate Rhizosphere
30 2932406140 Serratia sp. 2723 Isolate Rhizosphere
31 2937539931 Pantoea sp. LS15 Isolate Unclassified
32 2939577877 Serratia sp. 509 Isolate Rhizosphere
33 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
34 2945951305 Pantoea agglomerans W2I1 Isolate Rhizosphere
35 2974310843 Enterobacter sp. SORGH_AS 287 Isolate Unclassified
36 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
37 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
38 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
39 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
40 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
45 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
46 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
47 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
55 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
56 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
57 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
58 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
59 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
60 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
64 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
67 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
68 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
69 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
70 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
71 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
72 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
73 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
74 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
75 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
76 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
77 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
78 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
79 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
82 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
83 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
84 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
85 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
86 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
87 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
88 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
89 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
90 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
91 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
92 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
93 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
94 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
95 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
96 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
97 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
98 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
99 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
100 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
101 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
102 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
103 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
104 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
105 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
106 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
107 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
108 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
109 640753048 Serratia proteamaculans 568 Isolate Endosphere
110 8018221730 Enterobacter sp. CM29 Isolate Unclassified
111 8054844752 Dryocola boscaweniae H18W14 Isolate Rhizosphere
112 8054849141 Dryocola clanedunensis H11S18 Isolate Rhizosphere
113 8055092621 Silvania confinis H4N4 Isolate Rhizosphere
114 8055693939 Hafnia alvei A23BA Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80
Metatranscriptomes 0
Isolates 20

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.33
Nodule 6.19
Rhizoplane 6.19
Rhizosphere 55.24
Stem 0.48
Stem Tuber 0
Unclassified 28.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 RicEn_C3741 2010549000 Bacteria 4609
2 JGI24739J22299_10031843 3300001989 Bacteria 1819
3 JGI25162J39368_1002661 3300002737 Bacteria 6550
4 rootH2_10016568 3300003320 Bacteria 39258
5 Ga0065703_1020008 3300005272 Bacteria 2167
6 Ga0065704_10073174 3300005289 Bacteria 7504
7 Ga0070662_100043819 3300005457 Bacteria 3203
8 Ga0070665_100000374 3300005548 Bacteria 66650
9 Ga0075364_10010982 3300006051 Bacteria 5491
10 Ga0075364_10011932 3300006051 Bacteria 5295
11 Ga0079104_1000418 3300006946 Bacteria 48565
12 Ga0079104_1000844 3300006946 Bacteria 25473
13 Ga0079104_1001156 3300006946 Bacteria 19098
14 Ga0079104_1001740 3300006946 Bacteria 13774
15 Ga0079104_1002899 3300006946 Bacteria 8556
16 Ga0079104_1011431 3300006946 Bacteria 2854
17 Ga0105251_10011973 3300009011 Bacteria 4925
18 Ga0105251_10013389 3300009011 Bacteria 4592
19 Ga0105251_10046541 3300009011 Bacteria 2088
20 Ga0105251_10049671 3300009011 Bacteria 2007
21 Ga0105244_10000092 3300009036 Bacteria 96133
22 Ga0105244_10000382 3300009036 Bacteria 41200
23 Ga0105244_10000494 3300009036 Bacteria 35545
24 Ga0105244_10002653 3300009036 Bacteria 13406
25 Ga0105244_10008388 3300009036 Bacteria 6455
26 Ga0105250_10000018 3300009092 Bacteria 246692
27 Ga0105250_10013285 3300009092 Bacteria 3390
28 Ga0157373_10005544 3300013100 Bacteria 9463
29 Ga0157373_10009437 3300013100 Bacteria 7207
30 Ga0157373_10014063 3300013100 Bacteria 5868
31 Ga0157371_10000623 3300013102 Bacteria 42132
32 Ga0157371_10000758 3300013102 Bacteria 37304
33 Ga0157371_10004605 3300013102 Bacteria 11970
34 Ga0157371_10081246 3300013102 Bacteria 2295
35 Ga0157371_10127386 3300013102 Bacteria 1811
36 Ga0157370_10011161 3300013104 Bacteria 9417
37 Ga0157369_10002399 3300013105 Bacteria 22505
38 Ga0157369_10051460 3300013105 Bacteria 4457
39 Ga0163162_10120366 3300013306 Bacteria 2729
40 Ga0157372_10018718 3300013307 Bacteria 7450
41 Ga0182006_1000009 3300015261 Bacteria 438243
42 Ga0183366_1001 3300015679 Bacteria 2743932
43 Ga0183366_1002 3300015679 Bacteria 791639
44 Ga0183370_1001 3300015680 Bacteria 2743932
45 Ga0183370_1002 3300015680 Bacteria 791639
46 Ga0183369_1001 3300015685 Bacteria 2743932
47 Ga0183369_1002 3300015685 Bacteria 791621
48 Ga0183368_1001 3300015687 Bacteria 2743932
49 Ga0183368_1005 3300015687 Bacteria 791621
50 Ga0209437_100100 3300025233 Bacteria 228479
51 Ga0207696_1000013 3300025711 Bacteria 524881
52 Ga0207696_1027005 3300025711 Bacteria 1773
53 Ga0207696_1033276 3300025711 Bacteria 1545
54 Ga0207655_1000002 3300025728 Bacteria 1148694
55 Ga0207655_1000075 3300025728 Bacteria 226658
56 Ga0207655_1000144 3300025728 Bacteria 136801
57 Ga0207655_1000576 3300025728 Bacteria 45499
58 Ga0207655_1001012 3300025728 Bacteria 28607
59 Ga0207655_1006050 3300025728 Bacteria 8085
60 Ga0207655_1012684 3300025728 Bacteria 4900
61 Ga0207655_1020774 3300025728 Bacteria 3360
62 Ga0207713_1000007 3300025735 Bacteria 564979
63 Ga0207713_1000766 3300025735 Bacteria 29687
64 Ga0207713_1001503 3300025735 Bacteria 18425
65 Ga0207713_1018041 3300025735 Bacteria 3508
66 Ga0209281_1000284 3300027111 Bacteria 95457
67 Ga0209281_1000340 3300027111 Bacteria 79749
68 Ga0209281_1000352 3300027111 Bacteria 75822
69 Ga0209281_1000403 3300027111 Bacteria 66018
70 Ga0209281_1001438 3300027111 Bacteria 14023
71 Ga0209281_1007653 3300027111 Bacteria 2693
72 Ga0209371_1000679 3300027312 Bacteria 29421
73 Ga0209371_1001541 3300027312 Bacteria 15259
74 Ga0268266_10000894 3300028379 Bacteria 38498
75 Ga0268256_1000563 3300030500 Bacteria 30009
76 Ga0268256_1001315 3300030500 Bacteria 15259
77 Ga0439438_000001 3300041405 Bacteria 1263568
78 Ga0439438_000237 3300041405 Bacteria 24714
79 Ga0439438_000774 3300041405 Bacteria 14295
80 Ga0439447_005507 3300041407 Bacteria 4200
81 Ga0439447_010132 3300041407 Bacteria 2813
82 Ga0439432_028653 3300042006 Bacteria 1812
83 Ga0439452_000406 3300042010 Bacteria 25323
84 Ga0439452_000952 3300042010 Bacteria 13001
85 Ga0439463_006553 3300042016 Bacteria 2885
86 Ga0439464_0003065 3300042439 Bacteria 4179
87 Ga0495591_000017 3300046458 Bacteria 238400
88 Ga0495591_001640 3300046458 Bacteria 13489
89 Ga0495591_004277 3300046458 Bacteria 7056
90 Ga0495638_0001777 3300046460 Bacteria 18850
91 Ga0495650_0000047 3300046471 Bacteria 335136
92 Ga0495650_0000088 3300046471 Bacteria 234769
93 Ga0495650_0000829 3300046471 Bacteria 37341
94 Ga0495605_0004695 3300046474 Bacteria 7984
95 Ga0495596_0001960 3300046500 Bacteria 11359
96 Ga0495607_0004492 3300046501 Bacteria 10237
97 Ga0495606_0000556 3300046507 Bacteria 59586
98 Ga0495616_0031961 3300046513 Bacteria 2753
99 Ga0495643_0019558 3300046522 Bacteria 3915
100 Ga0495644_0012541 3300046523 Bacteria 3257
101 Ga0495648_0000368 3300046524 Bacteria 49770
102 Ga0495654_0000439 3300046530 Bacteria 35336
103 Ga0495654_0001083 3300046530 Bacteria 19854
104 Ga0495671_0002889 3300046692 Bacteria 10731
105 Ga0495649_0000522 3300046694 Bacteria 32722
106 Ga0495589_0000004 3300046794 Bacteria 439891
107 Ga0495589_0000028 3300046794 Bacteria 179523
108 Ga0495589_0000044 3300046794 Bacteria 125396
109 Ga0495589_0004827 3300046794 Bacteria 7163
110 Ga0495660_0000010 3300046810 Bacteria 370769
111 Ga0495660_0027995 3300046810 Bacteria 3186
112 Ga0495672_0000002 3300047320 Bacteria 740116
113 Ga0495672_0000039 3300047320 Bacteria 272506
114 Ga0495672_0000047 3300047320 Bacteria 246926
115 Ga0495683_0000708 3300047323 Bacteria 24413
116 Ga0495679_011908 3300047446 Bacteria 3338
117 Ga0495679_019074 3300047446 Bacteria 2419
118 Ga0495673_0000086 3300047469 Bacteria 192268
119 Ga0496102_0011469 3300048905 Bacteria 7642
120 Ga0496104_0079538 3300048907 Bacteria 3125
121 Ga0496116_0000145 3300048919 Bacteria 145993
122 Ga0496116_0003484 3300048919 Bacteria 15480
123 Ga0496116_0123837 3300048919 Bacteria 1489
124 Ga0496117_0000078 3300048920 Bacteria 227068
125 Ga0496117_0002867 3300048920 Bacteria 20953
126 Ga0496117_0009781 3300048920 Bacteria 8844
127 Ga0496117_0019368 3300048920 Bacteria 5593
128 Ga0496117_0029292 3300048920 Bacteria 4247
129 Ga0496117_0037229 3300048920 Bacteria 3627
130 Ga0496117_0103054 3300048920 Bacteria 1799
131 Ga0496118_0000059 3300048921 Bacteria 226336
132 Ga0496118_0001133 3300048921 Bacteria 41145
133 Ga0496118_0006920 3300048921 Bacteria 12265
134 Ga0496118_0007515 3300048921 Bacteria 11522
135 Ga0496118_0019167 3300048921 Bacteria 6126
136 Ga0496119_0001327 3300048922 Bacteria 30412
137 Ga0496119_0003248 3300048922 Bacteria 17000
138 Ga0496119_0006053 3300048922 Bacteria 11345
139 Ga0496119_0017713 3300048922 Bacteria 5344
140 Ga0496119_0087627 3300048922 Bacteria 1776
141 Ga0496120_0001921 3300048923 Bacteria 22931
142 Ga0496120_0001953 3300048923 Bacteria 22587
143 Ga0496120_0016896 3300048923 Bacteria 4750
144 Ga0496120_0017527 3300048923 Bacteria 4640
145 Ga0496121_0000224 3300048924 Bacteria 122378
146 Ga0496121_0000558 3300048924 Bacteria 70344
147 Ga0496121_0000830 3300048924 Bacteria 56289
148 Ga0496121_0002760 3300048924 Bacteria 26058
149 Ga0496121_0007331 3300048924 Bacteria 13335
150 Ga0496122_0001508 3300048925 Bacteria 37124
151 Ga0496122_0002714 3300048925 Bacteria 24593
152 Ga0496122_0006040 3300048925 Bacteria 14121
153 Ga0496123_0002129 3300048926 Bacteria 25333
154 Ga0496123_0009094 3300048926 Bacteria 8994
155 Ga0496123_0027507 3300048926 Bacteria 4233
156 Ga0496124_0001117 3300048927 Bacteria 42230
157 Ga0496124_0008690 3300048927 Bacteria 10562
158 Ga0496124_0018642 3300048927 Bacteria 6492
159 Ga0496125_0001149 3300048928 Bacteria 40140
160 Ga0496125_0001338 3300048928 Bacteria 36325
161 Ga0496125_0006743 3300048928 Bacteria 12341
162 Ga0496125_0021787 3300048928 Bacteria 5962
163 Ga0496126_0002685 3300048929 Bacteria 23504
164 Ga0496126_0008101 3300048929 Bacteria 11381
165 Ga0496126_0050493 3300048929 Bacteria 3789
166 Ga0495678_002198 3300049459 Bacteria 13677
167 Ga0495682_0000003 3300049460 Bacteria 515787
168 Ga0500621_000007 3300053126 Bacteria 214505

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042010 Ga0439452_000406 Ga0439452_000406_16925_18241 386
2 3300047320 Ga0495672_0000039 Ga0495672_0000039_115984_117222 387
3 3300048922 Ga0496119_0006053 Ga0496119_0006053_6432_7763 399
4 3300048924 Ga0496121_0002760 Ga0496121_0002760_21747_23078 399
5 3300048925 Ga0496122_0002714 Ga0496122_0002714_1343_2674 399
6 3300048928 Ga0496125_0001149 Ga0496125_0001149_31752_33083 399
7 iso_pu_bacteria 2791355275 2793403595 399
8 3300015261 Ga0182006_1000009 Ga0182006_1000009159 401
9 3300027312 Ga0209371_1001541 Ga0209371_100154112 401
10 3300030500 Ga0268256_1001315 Ga0268256_100131512 401
11 3300041405 Ga0439438_000774 Ga0439438_000774_164_1402 402
12 3300046500 Ga0495596_0001960 Ga0495596_0001960_2118_3539 410
13 3300046513 Ga0495616_0031961 Ga0495616_0031961_258_1658 412
14 3300046794 Ga0495589_0004827 Ga0495589_0004827_224_1624 412
15 3300046810 Ga0495660_0000010 Ga0495660_0000010_202966_204366 412
16 3300046471 Ga0495650_0000088 Ga0495650_0000088_204658_206058 417
17 3300046474 Ga0495605_0004695 Ga0495605_0004695_162_1586 417
18 3300047320 Ga0495672_0000047 Ga0495672_0000047_39887_41287 417
19 3300048920 Ga0496117_0037229 Ga0496117_0037229_2120_3460 417
20 3300006051 Ga0075364_10010982 Ga0075364_100109825 420
21 3300009011 Ga0105251_10011973 Ga0105251_100119732 420
22 3300025728 Ga0207655_1020774 Ga0207655_10207742 420
23 3300025735 Ga0207713_1000007 Ga0207713_1000007386 420
24 3300048925 Ga0496122_0006040 Ga0496122_0006040_11807_13198 420
25 3300048926 Ga0496123_0002129 Ga0496123_0002129_7073_8464 420
26 3300009036 Ga0105244_10000092 Ga0105244_1000009290 421
27 3300009092 Ga0105250_10013285 Ga0105250_100132854 421
28 3300025711 Ga0207696_1027005 Ga0207696_10270051 421
29 3300048905 Ga0496102_0011469 Ga0496102_0011469_4133_5524 421
30 3300048919 Ga0496116_0123837 Ga0496116_0123837_35_1426 421
31 3300048920 Ga0496117_0000078 Ga0496117_0000078_67926_69317 421
32 3300048921 Ga0496118_0000059 Ga0496118_0000059_157752_159143 421
33 3300009011 Ga0105251_10046541 Ga0105251_100465411 422
34 3300009036 Ga0105244_10000382 Ga0105244_1000038238 423
35 3300013307 Ga0157372_10018718 Ga0157372_100187188 423
36 3300025728 Ga0207655_1000576 Ga0207655_100057610 423
37 3300002737 JGI25162J39368_1002661 JGI25162J39368_10026612 425
38 3300013105 Ga0157369_10051460 Ga0157369_100514605 425
39 3300025233 Ga0209437_100100 Ga0209437_100100121 425
40 3300025728 Ga0207655_1000002 Ga0207655_1000002200 425
41 iso_pu_bacteria 2884086401 2884087813 428
42 3300048920 Ga0496117_0019368 Ga0496117_0019368_3475_4854 430
43 3300048921 Ga0496118_0019167 Ga0496118_0019167_1501_2880 430
44 3300048927 Ga0496124_0008690 Ga0496124_0008690_3131_4510 430
45 iso_pu_bacteria 8055092621 8055095544 431
46 3300013100 Ga0157373_10005544 Ga0157373_100055447 432
47 3300013102 Ga0157371_10000758 Ga0157371_1000075831 432
48 3300041405 Ga0439438_000001 Ga0439438_000001_621092_622432 432
49 3300041407 Ga0439447_010132 Ga0439447_010132_900_2240 432
50 iso_pu_bacteria 2923634449 2923635950 432
51 iso_pu_bacteria 2547132416 2548648956 433
52 iso_pu_bacteria 2602042047 2603645424 433
53 iso_pu_bacteria 2602042066 2603698692 433
54 iso_pu_bacteria 2602042067 2603705427 433
55 iso_pu_bacteria 2821118458 2821121098 433
56 iso_pu_bacteria 2927833300 2927837555 433
57 3300006946 Ga0079104_1001740 Ga0079104_10017405 434
58 3300013102 Ga0157371_10004605 Ga0157371_100046052 434
59 3300027111 Ga0209281_1000284 Ga0209281_100028413 434
60 3300042006 Ga0439432_028653 Ga0439432_028653_296_1624 434
61 3300048924 Ga0496121_0007331 Ga0496121_0007331_10211_11539 434
62 3300048927 Ga0496124_0001117 Ga0496124_0001117_37903_39231 434
63 3300048928 Ga0496125_0001338 Ga0496125_0001338_29357_30685 434
64 3300048929 Ga0496126_0050493 Ga0496126_0050493_1598_2926 434
65 iso_pu_bacteria 2891670763 2891671346 434
66 3300048925 Ga0496122_0001508 Ga0496122_0001508_1238_2578 435
67 3300048926 Ga0496123_0027507 Ga0496123_0027507_2214_3554 435
68 iso_pu_bacteria 2937539931 2937541128 435
69 iso_pu_bacteria 8054849141 8054851686 435
70 iso_pu_bacteria 8055693939 8055695656 435
71 3300006946 Ga0079104_1000844 Ga0079104_100084415 436
72 3300015679 Ga0183366_1001 Ga0183366_10012441 436
73 3300015680 Ga0183370_1001 Ga0183370_10012441 436
74 3300015685 Ga0183369_1001 Ga0183369_10012442 436
75 3300015687 Ga0183368_1001 Ga0183368_10012441 436
76 3300025711 Ga0207696_1033276 Ga0207696_10332761 436
77 3300025735 Ga0207713_1000766 Ga0207713_100076625 436
78 3300025735 Ga0207713_1018041 Ga0207713_10180414 436
79 3300027111 Ga0209281_1001438 Ga0209281_100143810 436
80 3300046458 Ga0495591_001640 Ga0495591_001640_3020_4402 436
81 3300046501 Ga0495607_0004492 Ga0495607_0004492_7920_9320 436
82 3300046692 Ga0495671_0002889 Ga0495671_0002889_3740_5164 436
83 3300046694 Ga0495649_0000522 Ga0495649_0000522_31225_32607 436
84 3300047323 Ga0495683_0000708 Ga0495683_0000708_3851_5251 436
85 3300047469 Ga0495673_0000086 Ga0495673_0000086_76838_78238 436
86 3300048920 Ga0496117_0029292 Ga0496117_0029292_397_1728 436
87 3300048922 Ga0496119_0001327 Ga0496119_0001327_1257_2588 436
88 3300048923 Ga0496120_0001953 Ga0496120_0001953_1257_2588 436
89 3300048923 Ga0496120_0016896 Ga0496120_0016896_3267_4598 436
90 3300048926 Ga0496123_0009094 Ga0496123_0009094_1639_2970 436
91 3300048927 Ga0496124_0018642 Ga0496124_0018642_3534_4865 436
92 3300048928 Ga0496125_0021787 Ga0496125_0021787_3298_4629 436
93 3300048929 Ga0496126_0002685 Ga0496126_0002685_1334_2665 436
94 3300006946 Ga0079104_1001156 Ga0079104_100115617 437
95 3300009036 Ga0105244_10008388 Ga0105244_100083889 437
96 3300025728 Ga0207655_1000075 Ga0207655_1000075149 437
97 3300025728 Ga0207655_1012684 Ga0207655_10126848 437
98 3300025735 Ga0207713_1001503 Ga0207713_10015039 437
99 3300027111 Ga0209281_1000352 Ga0209281_100035247 437
100 3300046458 Ga0495591_000017 Ga0495591_000017_210731_212077 437
101 3300048907 Ga0496104_0079538 Ga0496104_0079538_1656_3023 437
102 3300048921 Ga0496118_0001133 Ga0496118_0001133_3451_4818 437
103 3300048922 Ga0496119_0003248 Ga0496119_0003248_15478_16845 437
104 3300048922 Ga0496119_0087627 Ga0496119_0087627_153_1490 437
105 3300048923 Ga0496120_0001921 Ga0496120_0001921_21409_22776 437
106 iso_pu_bacteria 8018221730 8018225602 437
107 3300046471 Ga0495650_0000829 Ga0495650_0000829_35069_36457 439
108 3300047320 Ga0495672_0000002 Ga0495672_0000002_34070_35458 439
109 iso_pu_bacteria 2602042109 2603867126 439
110 3300046460 Ga0495638_0001777 Ga0495638_0001777_591_1979 440
111 3300047446 Ga0495679_019074 Ga0495679_019074_454_1842 440
112 3300006946 Ga0079104_1002899 Ga0079104_10028999 442
113 3300006946 Ga0079104_1011431 Ga0079104_10114314 442
114 3300027111 Ga0209281_1000340 Ga0209281_100034027 442
115 3300027111 Ga0209281_1007653 Ga0209281_10076531 442
116 iso_pu_bacteria 2939602548 2939604880 442
117 3300046458 Ga0495591_004277 Ga0495591_004277_3652_5052 443
118 3300048929 Ga0496126_0008101 Ga0496126_0008101_713_2053 444
119 3300027312 Ga0209371_1000679 Ga0209371_100067923 445
120 3300030500 Ga0268256_1000563 Ga0268256_100056324 445
121 3300046507 Ga0495606_0000556 Ga0495606_0000556_23128_24528 445
122 3300046524 Ga0495648_0000368 Ga0495648_0000368_36618_38018 445
123 3300048924 Ga0496121_0000558 Ga0496121_0000558_43089_44474 445
124 3300009036 Ga0105244_10002653 Ga0105244_1000265312 449
125 3300025728 Ga0207655_1001012 Ga0207655_100101221 449
126 3300053126 Ga0500621_000007 Ga0500621_000007_23222_24622 449
127 iso_pu_bacteria 2881609920 2881610200 449
128 3300005457 Ga0070662_100043819 Ga0070662_1000438192 451
129 3300025728 Ga0207655_1006050 Ga0207655_10060505 451
130 3300041407 Ga0439447_005507 Ga0439447_005507_133_1518 451
131 3300042439 Ga0439464_0003065 Ga0439464_0003065_461_1846 451
132 3300046522 Ga0495643_0019558 Ga0495643_0019558_2498_3883 451
133 3300048924 Ga0496121_0000224 Ga0496121_0000224_38852_40237 451
134 3300046810 Ga0495660_0027995 Ga0495660_0027995_463_1848 452
135 iso_pu_bacteria 2602042067 2603704649 452
136 iso_pu_bacteria 2821118458 2821120452 452
137 iso_pu_bacteria 8054844752 8054848058 452
138 iso_pu_bacteria 2808606414 2809125283 453
139 iso_pu_bacteria 2932406140 2932410028 453
140 iso_pu_bacteria 2939577877 2939581368 453
141 3300006946 Ga0079104_1000418 Ga0079104_100041843 454
142 3300027111 Ga0209281_1000403 Ga0209281_10004036 454
143 3300047446 Ga0495679_011908 Ga0495679_011908_778_2151 454
144 3300009011 Ga0105251_10049671 Ga0105251_100496712 455
145 3300013100 Ga0157373_10009437 Ga0157373_100094371 455
146 3300013102 Ga0157371_10081246 Ga0157371_100812462 455
147 3300013105 Ga0157369_10002399 Ga0157369_100023997 455
148 3300041405 Ga0439438_000237 Ga0439438_000237_17834_19207 455
149 3300048919 Ga0496116_0003484 Ga0496116_0003484_6785_8155 455
150 3300048920 Ga0496117_0009781 Ga0496117_0009781_6259_7629 455
151 3300048921 Ga0496118_0006920 Ga0496118_0006920_6958_8328 455
152 iso_pu_bacteria 2844528606 2844529195 455
153 iso_pu_bacteria 2865014394 2865016627 455
154 iso_pu_bacteria 2945951305 2945952122 455
155 3300003320 rootH2_10016568 rootH2_1001656821 456
156 iso_pu_bacteria 2508501071 2508851767 457
157 iso_pu_bacteria 2547132181 2547696212 457
158 iso_pu_bacteria 2561511199 2562464361 457
159 iso_pu_bacteria 2585427592 2585831562 457
160 iso_pu_bacteria 2608642108 2608670762 457
161 iso_pu_bacteria 2667528172 2671101050 457
162 iso_pu_bacteria 2671180115 2671587651 457
163 iso_pu_bacteria 2681812869 2682007150 457
164 iso_pu_bacteria 2684622997 2686355552 457
165 iso_pu_bacteria 2765235842 2765588401 457
166 iso_pu_bacteria 2823373977 2823374190 457
167 iso_pu_bacteria 2847797336 2847802171 457
168 iso_pu_bacteria 2869551831 2869553688 457
169 iso_pu_bacteria 2974310843 2974312675 457
170 iso_pu_bacteria 640753048 640937336 457
171 3300009011 Ga0105251_10013389 Ga0105251_100133895 458
172 3300009036 Ga0105244_10000494 Ga0105244_1000049426 458
173 3300013306 Ga0163162_10120366 Ga0163162_101203663 458
174 3300015679 Ga0183366_1002 Ga0183366_1002403 458
175 3300015680 Ga0183370_1002 Ga0183370_1002403 458
176 3300015685 Ga0183369_1002 Ga0183369_1002403 458
177 3300015687 Ga0183368_1005 Ga0183368_1005403 458
178 3300025728 Ga0207655_1000144 Ga0207655_100014466 458
179 3300042016 Ga0439463_006553 Ga0439463_006553_997_2382 458
180 3300046794 Ga0495589_0000028 Ga0495589_0000028_52955_54340 458
181 3300048928 Ga0496125_0006743 Ga0496125_0006743_9699_11084 458
182 3300046523 Ga0495644_0012541 Ga0495644_0012541_1321_2721 459
183 3300046530 Ga0495654_0001083 Ga0495654_0001083_18123_19523 459
184 3300049459 Ga0495678_002198 Ga0495678_002198_8402_9802 459
185 3300049460 Ga0495682_0000003 Ga0495682_0000003_489915_491315 459
186 2010549000 RicEn_C3741 RicEn_67410 460
187 3300001989 JGI24739J22299_10031843 JGI24739J22299_100318432 460
188 3300005272 Ga0065703_1020008 Ga0065703_10200083 460
189 3300005289 Ga0065704_10073174 Ga0065704_100731745 460
190 3300005548 Ga0070665_100000374 Ga0070665_1000003748 460
191 3300006051 Ga0075364_10011932 Ga0075364_100119327 460
192 3300009092 Ga0105250_10000018 Ga0105250_1000001810 460
193 3300013100 Ga0157373_10014063 Ga0157373_100140631 460
194 3300013102 Ga0157371_10000623 Ga0157371_1000062340 460
195 3300013102 Ga0157371_10127386 Ga0157371_101273861 460
196 3300013104 Ga0157370_10011161 Ga0157370_100111616 460
197 3300025711 Ga0207696_1000013 Ga0207696_1000013398 460
198 3300028379 Ga0268266_10000894 Ga0268266_100008947 460
199 3300042010 Ga0439452_000952 Ga0439452_000952_1843_3255 460
200 3300046471 Ga0495650_0000047 Ga0495650_0000047_1738_3150 460
201 3300046530 Ga0495654_0000439 Ga0495654_0000439_7772_9196 460
202 3300046794 Ga0495589_0000004 Ga0495589_0000004_436987_438378 460
203 3300046794 Ga0495589_0000044 Ga0495589_0000044_118639_120030 460
204 3300048919 Ga0496116_0000145 Ga0496116_0000145_139628_141019 460
205 3300048920 Ga0496117_0002867 Ga0496117_0002867_13989_15401 460
206 3300048920 Ga0496117_0103054 Ga0496117_0103054_332_1723 460
207 3300048921 Ga0496118_0007515 Ga0496118_0007515_1997_3409 460
208 3300048922 Ga0496119_0017713 Ga0496119_0017713_2049_3440 460
209 3300048923 Ga0496120_0017527 Ga0496120_0017527_2884_4275 460
210 3300048924 Ga0496121_0000830 Ga0496121_0000830_50420_51811 460

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12486

VasL

Type VI secretion system, EvfB, or VasL

321

465

0.98

PF06812

ImpA_N

ImpA, N-terminal, type VI secretion system

23

128

0.95

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pLDDT pTM Quality
73.19 0.41 Low
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Predicted Structure (AlphaFold2)

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