F320743

General Info

Members Datasets Scaffolds Average Seq Length
210 140 420 199

Family's Representative Sequence

Representative Sequence 3300046476|Ga0495662_0000162|Ga0495662_0000162_14497_15207
Length 226
Sequence MFPPEAGLVPSRDWERDPSRFARTFVLFCTLTQVSAVAQIGAGDVAAILERAVDLASAEGLEGLTIGRLAAELEMSKSGLFAHFGSKQELQLATVDAAAGRFRESVIEPALDSPDGAPRLRAMADSYLAHLDRDAYSGGCFWAATSAEYDDRHGPVRDAIAAALDAWLGELERQARVAGAAEPARFAFELYAAVMGANSRFRLSGDRRAFEYARAVVERLLGELPG

Samples

Sample ID Description Type Environment
1 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
72 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
73 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
74 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
75 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
76 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
79 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
80 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
81 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
82 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
85 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
86 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
91 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
97 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
98 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
99 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
100 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
101 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
102 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
105 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
106 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
107 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
108 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
109 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
110 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
111 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
112 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
113 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
114 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
115 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
118 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
119 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
120 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
121 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
122 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
125 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
136 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
137 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
138 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.1
Rhizosphere 91.43
Stem 0
Stem Tuber 0
Unclassified 1.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495662_0000162 3300046476 Bacteria 26288
2 Ga0070683_100002905 3300005329 Bacteria 13726
3 Ga0070683_100007526 3300005329 Bacteria 9206
4 Ga0070683_100009855 3300005329 Bacteria 8188
5 Ga0070683_100183664 3300005329 Bacteria 1985
6 Ga0070680_100011888 3300005336 Bacteria 6754
7 Ga0070682_100000009 3300005337 Bacteria 291635
8 Ga0070682_100392008 3300005337 Bacteria 1048
9 Ga0070660_100134431 3300005339 Bacteria 1981
10 Ga0070661_100000255 3300005344 Bacteria 43552
11 Ga0070668_100097680 3300005347 Bacteria 2323
12 Ga0070675_100000196 3300005354 Bacteria 38134
13 Ga0070674_100000001 3300005356 Bacteria 277173
14 Ga0070674_100018561 3300005356 Bacteria 4400
15 Ga0070688_100000747 3300005365 Bacteria 16013
16 Ga0070688_100257514 3300005365 Bacteria 1245
17 Ga0070659_100033306 3300005366 Bacteria 4001
18 Ga0070667_100850067 3300005367 Unclassified 848
19 Ga0070713_100000101 3300005436 Bacteria 54832
20 Ga0070713_100090766 3300005436 Bacteria 2627
21 Ga0070681_10104739 3300005458 Bacteria 2771
22 Ga0068867_100000454 3300005459 Bacteria 27165
23 Ga0070685_10001568 3300005466 Bacteria 12047
24 Ga0070685_10122922 3300005466 Bacteria 1614
25 Ga0070679_100000365 3300005530 Bacteria 38496
26 Ga0070684_100005142 3300005535 Bacteria 10001
27 Ga0070684_100006870 3300005535 Bacteria 8835
28 Ga0070684_100052158 3300005535 Bacteria 3556
29 Ga0068853_100147545 3300005539 Bacteria 2115
30 Ga0070672_100001124 3300005543 Bacteria 16332
31 Ga0070665_100000022 3300005548 Bacteria 379286
32 Ga0070665_100044193 3300005548 Bacteria 4474
33 Ga0070664_100037281 3300005564 Bacteria 4087
34 Ga0070664_100558376 3300005564 Bacteria 1059
35 Ga0068856_100006944 3300005614 Bacteria 11073
36 Ga0068856_100020478 3300005614 Bacteria 6425
37 Ga0068864_100000024 3300005618 Bacteria 252632
38 Ga0068866_10000140 3300005718 Bacteria 32464
39 Ga0068863_100000050 3300005841 Bacteria 130200
40 Ga0068858_100000264 3300005842 Bacteria 55994
41 Ga0081539_10069435 3300005985 Bacteria 1896
42 Ga0070712_100481266 3300006175 Bacteria 1038
43 Ga0097621_100700005 3300006237 Bacteria 933
44 Ga0105245_10004280 3300009098 Bacteria 12655
45 Ga0114129_12019014 3300009147 Bacteria 697
46 Ga0105243_10149729 3300009148 Bacteria 2001
47 Ga0105242_10022159 3300009176 Bacteria 4992
48 Ga0105238_10000016 3300009551 Bacteria 236218
49 Ga0105249_11309302 3300009553 Bacteria 796
50 Ga0157374_10002416 3300013296 Bacteria 15758
51 Ga0157374_10059230 3300013296 Bacteria 3580
52 Ga0157378_10001452 3300013297 Bacteria 21356
53 Ga0157378_10070212 3300013297 Bacteria 3144
54 Ga0157375_10162600 3300013308 Bacteria 2375
55 Ga0157380_10000100 3300014326 Bacteria 48182
56 Ga0157380_10511887 3300014326 Bacteria 1169
57 Ga0163161_10000103 3300017792 Bacteria 81496
58 Ga0207653_10078613 3300025885 Bacteria 1138
59 Ga0207642_10000066 3300025899 Bacteria 28858
60 Ga0207707_10088395 3300025912 Bacteria 2707
61 Ga0207660_10193827 3300025917 Bacteria 1584
62 Ga0207657_10236039 3300025919 Bacteria 1461
63 Ga0207649_10000015 3300025920 Bacteria 245662
64 Ga0207652_10000536 3300025921 Bacteria 38532
65 Ga0207694_10000012 3300025924 Bacteria 411218
66 Ga0207659_10000268 3300025926 Bacteria 31760
67 Ga0207687_10002421 3300025927 Bacteria 12660
68 Ga0207700_10000019 3300025928 Bacteria 183117
69 Ga0207700_10082286 3300025928 Bacteria 2517
70 Ga0207690_10019059 3300025932 Bacteria 4216
71 Ga0207686_10013833 3300025934 Bacteria 4476
72 Ga0207709_10090177 3300025935 Bacteria 2001
73 Ga0207669_10000002 3300025937 Bacteria 377651
74 Ga0207665_10164847 3300025939 Bacteria 1597
75 Ga0207691_10000286 3300025940 Bacteria 49918
76 Ga0207661_10000446 3300025944 Bacteria 26544
77 Ga0207661_10000545 3300025944 Bacteria 24110
78 Ga0207661_10001203 3300025944 Bacteria 17323
79 Ga0207661_10316549 3300025944 Bacteria 1402
80 Ga0207679_10028739 3300025945 Bacteria 3863
81 Ga0207679_10496833 3300025945 Bacteria 1088
82 Ga0207668_10047255 3300025972 Bacteria 2946
83 Ga0207668_10950245 3300025972 Bacteria 767
84 Ga0207658_10846915 3300025986 Unclassified 831
85 Ga0207703_10001272 3300026035 Bacteria 23450
86 Ga0207639_10001685 3300026041 Bacteria 14908
87 Ga0207702_10005632 3300026078 Bacteria 10926
88 Ga0207702_10018183 3300026078 Bacteria 5815
89 Ga0207641_10000295 3300026088 Bacteria 62363
90 Ga0207648_10009090 3300026089 Bacteria 9553
91 Ga0207676_10000048 3300026095 Bacteria 147853
92 Ga0207675_100556822 3300026118 Bacteria 1146
93 Ga0268266_10000029 3300028379 Bacteria 424015
94 Ga0268266_10334791 3300028379 Bacteria 1419
95 Ga0265337_1000927 3300028556 Bacteria 15376
96 Ga0265326_10000056 3300028558 Bacteria 64840
97 Ga0265326_10000243 3300028558 Bacteria 26290
98 Ga0265319_1000217 3300028563 Bacteria 43119
99 Ga0265318_10000655 3300028577 Bacteria 23639
100 Ga0265322_10000017 3300028654 Bacteria 114833
101 Ga0265336_10000001 3300028666 Bacteria 916179
102 Ga0265336_10018926 3300028666 Bacteria 2225
103 Ga0265338_10000004 3300028800 Bacteria 644793
104 Ga0265324_10001639 3300029957 Bacteria 12385
105 Ga0265324_10009110 3300029957 Bacteria 3894
106 Ga0265332_10025178 3300031238 Bacteria 2615
107 Ga0265328_10000258 3300031239 Bacteria 24453
108 Ga0265320_10000068 3300031240 Bacteria 91884
109 Ga0265320_10077472 3300031240 Bacteria 1556
110 Ga0265340_10000002 3300031247 Bacteria 711693
111 Ga0265331_10005995 3300031250 Bacteria 7252
112 Ga0265327_10000317 3300031251 Bacteria 92215
113 Ga0265316_10004715 3300031344 Bacteria 13505
114 Ga0265314_10000973 3300031711 Bacteria 33669
115 Ga0265342_10130810 3300031712 Bacteria 1407
116 Ga0265342_10244201 3300031712 Bacteria 960
117 Ga0307415_100013275 3300032126 Bacteria 4803
118 Ga0373937_0042838 3300036401 Unclassified 4131
119 Ga0451853_2285234 3300041512 Bacteria 1051
120 Ga0466963_0000051 3300044694 Bacteria 39254
121 Ga0466963_0038439 3300044694 Bacteria 3129
122 Ga0466957_0167615 3300044842 Bacteria 1429
123 Ga0466959_0074859 3300045049 Bacteria 2448
124 Ga0466967_0000013 3300045976 Bacteria 103249
125 Ga0466967_0015388 3300045976 Bacteria 5994
126 Ga0466967_1789436 3300045976 Bacteria 611
127 Ga0495592_0000608 3300046454 Bacteria 25303
128 Ga0495592_0605320 3300046454 Bacteria 668
129 Ga0495641_0030150 3300046461 Bacteria 2605
130 Ga0495641_0051058 3300046461 Bacteria 1890
131 Ga0495653_0202919 3300046463 Bacteria 1344
132 Ga0495653_0323940 3300046463 Bacteria 998
133 Ga0495662_0014720 3300046476 Bacteria 3802
134 Ga0495594_0000001 3300046499 Bacteria 293051
135 Ga0495608_0000042 3300046511 Bacteria 115906
136 Ga0495608_0002177 3300046511 Bacteria 14130
137 Ga0495610_0022450 3300046512 Bacteria 3452
138 Ga0495618_0000051 3300046514 Bacteria 87668
139 Ga0495628_0007286 3300046516 Bacteria 9588
140 Ga0495628_0060132 3300046516 Unclassified 2982
141 Ga0495630_0000027 3300046517 Bacteria 146589
142 Ga0495630_0002919 3300046517 Bacteria 11886
143 Ga0495630_0077791 3300046517 Bacteria 2501
144 Ga0495640_0008071 3300046533 Bacteria 8268
145 Ga0495586_0001779 3300046535 Bacteria 11781
146 Ga0495645_0005133 3300046543 Bacteria 8968
147 Ga0495622_0000033 3300046557 Bacteria 124162
148 Ga0495667_0000019 3300046559 Bacteria 181645
149 Ga0495667_0409425 3300046559 Bacteria 854
150 Ga0495634_0001282 3300046642 Bacteria 23024
151 Ga0495634_0009818 3300046642 Bacteria 7042
152 Ga0495588_0000204 3300046674 Bacteria 58892
153 Ga0495657_0000040 3300046675 Bacteria 115899
154 Ga0495657_0013724 3300046675 Bacteria 5966
155 Ga0495647_0000002 3300046681 Bacteria 174959
156 Ga0495647_0000549 3300046681 Bacteria 11034
157 Ga0495647_0001521 3300046681 Bacteria 7160
158 Ga0495613_0000067 3300046689 Bacteria 101960
159 Ga0495613_0000155 3300046689 Bacteria 67203
160 Ga0495624_0000005 3300046690 Bacteria 158127
161 Ga0495624_0020570 3300046690 Bacteria 4388
162 Ga0495600_0000376 3300046809 Bacteria 23258
163 Ga0495600_0000973 3300046809 Bacteria 15439
164 Ga0495604_0000201 3300047317 Bacteria 54479
165 Ga0495604_0007756 3300047317 Bacteria 8500
166 Ga0495604_0050591 3300047317 Bacteria 3226
167 Ga0495676_0002393 3300047321 Bacteria 16657
168 Ga0495676_0070376 3300047321 Bacteria 2695
169 Ga0495676_0334902 3300047321 Bacteria 1014
170 Ga0495676_0483298 3300047321 Bacteria 814
171 Ga0495680_0001106 3300047322 Bacteria 29781
172 Ga0495680_0006169 3300047322 Bacteria 11179
173 Ga0495675_0000036 3300047444 Bacteria 91842
174 Ga0495685_024025 3300047447 Bacteria 2098
175 Ga0495593_0004902 3300047673 Bacteria 7938
176 Ga0495593_0131601 3300047673 Bacteria 1270
177 Ga0495602_0000268 3300048088 Bacteria 47860
178 Ga0496104_0763224 3300048907 Bacteria 874
179 Ga0496108_0479518 3300048911 Bacteria 1087
180 Ga0496109_0000011 3300048912 Bacteria 234908
181 Ga0496109_0559523 3300048912 Bacteria 1079
182 Ga0496109_0977027 3300048912 Bacteria 784
183 Ga0496110_0000171 3300048913 Bacteria 39922
184 Ga0496110_0013955 3300048913 Bacteria 6657
185 Ga0496110_0016173 3300048913 Bacteria 6222
186 Ga0496111_0000020 3300048914 Bacteria 67992
187 Ga0496111_0243508 3300048914 Bacteria 1335
188 Ga0496112_0000641 3300048915 Bacteria 24272
189 Ga0496112_0185344 3300048915 Bacteria 2045
190 Ga0496113_0000002 3300048916 Bacteria 220193
191 Ga0496113_0001044 3300048916 Bacteria 14929
192 Ga0496113_0008425 3300048916 Bacteria 6718
193 Ga0496114_0041947 3300048917 Bacteria 3792
194 Ga0496115_0028973 3300048918 Bacteria 4345
195 Ga0501048_0482400 3300049582 Bacteria 889
196 Ga0501068_0614716 3300049584 Bacteria 709
197 Ga0501070_0531308 3300049586 Bacteria 943
198 Ga0495601_0000019 3300053077 Bacteria 161673
199 Ga0495601_0000231 3300053077 Bacteria 30020
200 Ga0495601_0129809 3300053077 Archaea 1641
201 Ga0495612_0000279 3300053078 Bacteria 21043
202 Ga0495612_0000534 3300053078 Bacteria 15287
203 Ga0495655_0003936 3300053083 Bacteria 2495
204 Ga0495595_0000009 3300053084 Bacteria 193039
205 Ga0495595_0000831 3300053084 Bacteria 11810
206 Ga0495595_0002276 3300053084 Bacteria 7467
207 Ga0495619_0000057 3300053085 Bacteria 93948
208 Ga0495619_0148092 3300053085 Bacteria 1619
209 Ga0495619_0235468 3300053085 Bacteria 1269
210 Ga0466962_0375042 3300061719 Bacteria 710
211 Ga0495662_0000162
212 Ga0070683_100002905
213 Ga0070683_100007526
214 Ga0070683_100009855
215 Ga0070683_100183664
216 Ga0070680_100011888
217 Ga0070682_100000009
218 Ga0070682_100392008
219 Ga0070660_100134431
220 Ga0070661_100000255
221 Ga0070668_100097680
222 Ga0070675_100000196
223 Ga0070674_100000001
224 Ga0070674_100018561
225 Ga0070688_100000747
226 Ga0070688_100257514
227 Ga0070659_100033306
228 Ga0070667_100850067
229 Ga0070713_100000101
230 Ga0070713_100090766
231 Ga0070681_10104739
232 Ga0068867_100000454
233 Ga0070685_10001568
234 Ga0070685_10122922
235 Ga0070679_100000365
236 Ga0070684_100005142
237 Ga0070684_100006870
238 Ga0070684_100052158
239 Ga0068853_100147545
240 Ga0070672_100001124
241 Ga0070665_100000022
242 Ga0070665_100044193
243 Ga0070664_100037281
244 Ga0070664_100558376
245 Ga0068856_100006944
246 Ga0068856_100020478
247 Ga0068864_100000024
248 Ga0068866_10000140
249 Ga0068863_100000050
250 Ga0068858_100000264
251 Ga0081539_10069435
252 Ga0070712_100481266
253 Ga0097621_100700005
254 Ga0105245_10004280
255 Ga0114129_12019014
256 Ga0105243_10149729
257 Ga0105242_10022159
258 Ga0105238_10000016
259 Ga0105249_11309302
260 Ga0157374_10002416
261 Ga0157374_10059230
262 Ga0157378_10001452
263 Ga0157378_10070212
264 Ga0157375_10162600
265 Ga0157380_10000100
266 Ga0157380_10511887
267 Ga0163161_10000103
268 Ga0207653_10078613
269 Ga0207642_10000066
270 Ga0207707_10088395
271 Ga0207660_10193827
272 Ga0207657_10236039
273 Ga0207649_10000015
274 Ga0207652_10000536
275 Ga0207694_10000012
276 Ga0207659_10000268
277 Ga0207687_10002421
278 Ga0207700_10000019
279 Ga0207700_10082286
280 Ga0207690_10019059
281 Ga0207686_10013833
282 Ga0207709_10090177
283 Ga0207669_10000002
284 Ga0207665_10164847
285 Ga0207691_10000286
286 Ga0207661_10000446
287 Ga0207661_10000545
288 Ga0207661_10001203
289 Ga0207661_10316549
290 Ga0207679_10028739
291 Ga0207679_10496833
292 Ga0207668_10047255
293 Ga0207668_10950245
294 Ga0207658_10846915
295 Ga0207703_10001272
296 Ga0207639_10001685
297 Ga0207702_10005632
298 Ga0207702_10018183
299 Ga0207641_10000295
300 Ga0207648_10009090
301 Ga0207676_10000048
302 Ga0207675_100556822
303 Ga0268266_10000029
304 Ga0268266_10334791
305 Ga0265337_1000927
306 Ga0265326_10000056
307 Ga0265326_10000243
308 Ga0265319_1000217
309 Ga0265318_10000655
310 Ga0265322_10000017
311 Ga0265336_10000001
312 Ga0265336_10018926
313 Ga0265338_10000004
314 Ga0265324_10001639
315 Ga0265324_10009110
316 Ga0265332_10025178
317 Ga0265328_10000258
318 Ga0265320_10000068
319 Ga0265320_10077472
320 Ga0265340_10000002
321 Ga0265331_10005995
322 Ga0265327_10000317
323 Ga0265316_10004715
324 Ga0265314_10000973
325 Ga0265342_10130810
326 Ga0265342_10244201
327 Ga0307415_100013275
328 Ga0373937_0042838
329 Ga0451853_2285234
330 Ga0466963_0000051
331 Ga0466963_0038439
332 Ga0466957_0167615
333 Ga0466959_0074859
334 Ga0466967_0000013
335 Ga0466967_0015388
336 Ga0466967_1789436
337 Ga0495592_0000608
338 Ga0495592_0605320
339 Ga0495641_0030150
340 Ga0495641_0051058
341 Ga0495653_0202919
342 Ga0495653_0323940
343 Ga0495662_0014720
344 Ga0495594_0000001
345 Ga0495608_0000042
346 Ga0495608_0002177
347 Ga0495610_0022450
348 Ga0495618_0000051
349 Ga0495628_0007286
350 Ga0495628_0060132
351 Ga0495630_0000027
352 Ga0495630_0002919
353 Ga0495630_0077791
354 Ga0495640_0008071
355 Ga0495586_0001779
356 Ga0495645_0005133
357 Ga0495622_0000033
358 Ga0495667_0000019
359 Ga0495667_0409425
360 Ga0495634_0001282
361 Ga0495634_0009818
362 Ga0495588_0000204
363 Ga0495657_0000040
364 Ga0495657_0013724
365 Ga0495647_0000002
366 Ga0495647_0000549
367 Ga0495647_0001521
368 Ga0495613_0000067
369 Ga0495613_0000155
370 Ga0495624_0000005
371 Ga0495624_0020570
372 Ga0495600_0000376
373 Ga0495600_0000973
374 Ga0495604_0000201
375 Ga0495604_0007756
376 Ga0495604_0050591
377 Ga0495676_0002393
378 Ga0495676_0070376
379 Ga0495676_0334902
380 Ga0495676_0483298
381 Ga0495680_0001106
382 Ga0495680_0006169
383 Ga0495675_0000036
384 Ga0495685_024025
385 Ga0495593_0004902
386 Ga0495593_0131601
387 Ga0495602_0000268
388 Ga0496104_0763224
389 Ga0496108_0479518
390 Ga0496109_0000011
391 Ga0496109_0559523
392 Ga0496109_0977027
393 Ga0496110_0000171
394 Ga0496110_0013955
395 Ga0496110_0016173
396 Ga0496111_0000020
397 Ga0496111_0243508
398 Ga0496112_0000641
399 Ga0496112_0185344
400 Ga0496113_0000002
401 Ga0496113_0001044
402 Ga0496113_0008425
403 Ga0496114_0041947
404 Ga0496115_0028973
405 Ga0501048_0482400
406 Ga0501068_0614716
407 Ga0501070_0531308
408 Ga0495601_0000019
409 Ga0495601_0000231
410 Ga0495601_0129809
411 Ga0495612_0000279
412 Ga0495612_0000534
413 Ga0495655_0003936
414 Ga0495595_0000009
415 Ga0495595_0000831
416 Ga0495595_0002276
417 Ga0495619_0000057
418 Ga0495619_0148092
419 Ga0495619_0235468
420 Ga0466962_0375042

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

48

94

0.96

PF16925

TetR_C_13

Tetracyclin repressor-like, C-terminal domain

116

217

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hyj-assembly1.cif.gz_A-2 the crystal structure of a tetr-family transcriptional regulator from streptomyces coelicolor 0.9393 17 198
3qbm-assembly1.cif.gz_B crystal structure of a tetr transcriptional regulator (caur_2221) from chloroflexus aurantiacus j-10-fl at 1.80 a resolution 0.8943 17 194
2hyj-assembly1.cif.gz_A-2 the crystal structure of a tetr-family transcriptional regulator from streptomyces coelicolor 0.8833 17 198
3g7r-assembly1.cif.gz_A crystal structure of sco4454, a tetr-family transcriptional regulator from streptomyces coelicolor 0.8756 17 203
2g7s-assembly1.cif.gz_A-2 the crystal structure of transcriptional regulator, tetr family, from agrobacterium tumefaciens 0.8628 18 195
ID Description Score Start End Superfamily
5ojxA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9483 22 74 1.10.10.60
3fiwB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.938 22 70 1.10.10.60
3b6cA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9371 22 67 1.10.10.60
2y2zA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.933 22 72 1.10.10.60
2y31B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9314 22 72 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A537ZZP2-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9812 10 198 GO:0003677
GO:0006355
AF-A0A1Q7X2L4-F1-model_v4 HTH tetR-type domain-containing protein 0.9763 26 197 GO:0003677
GO:0006355
AF-A0A7Y2GVE6-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9683 13 199 GO:0003677
GO:0006355
AF-A0A0D8BAX8-F1-model_v4 Transcriptional regulator, TetR family 0.965 5 199 GO:0003677
GO:0006355
AF-K6WAL1-F1-model_v4 Putative TetR family transcriptional regulator 0.9638 18 198 GO:0003677
GO:0006355

Map