F320694
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 210 | 175 | 420 | 201 |
Family's Representative Sequence
| Representative Sequence | 3300044694|Ga0466963_0033495|Ga0466963_0033495_203_922 |
| Length | 239 |
| Sequence | MFAGRPDVPNVLPTKGPAVAAKPVAPAPGRRPGPGRLVVLVSGSGTNLQAMLDTIAEAGAAAYGAEIVAVGADRDGIEGLARAERAGVPTFVCRVRDHATREEWDAALADAVAAYEPDLVVSAGFMKIVGKRFLARFGGRFVNTHPALLPSFPGAHGVRDALAYGVRVTGCTVHFVDDGVDTGPIIAQGVVEIRDEDHEDGGAALHERIKEVERRLLVDVVGRLARNGYRIEGRKVVIQ |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 2 | 3300002075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 | Metagenome | Rhizosphere |
| 3 | 3300002077 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 | Metagenome | Rhizosphere |
| 4 | 3300003911 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 5 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 7 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 8 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 9 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 10 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 18 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 22 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 24 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 25 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 26 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 27 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 28 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 29 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 30 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 31 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 32 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 33 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 47 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 52 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 53 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 77 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 78 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 79 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 80 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 81 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 82 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 83 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 84 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 85 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 86 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 87 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 88 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 89 | 3300042002 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 | Metagenome | Rhizosphere |
| 90 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 91 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 92 | 3300042122 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 | Metagenome | Rhizosphere |
| 93 | 3300042146 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 | Metagenome | Rhizosphere |
| 94 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 95 | 3300042531 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 | Metagenome | Rhizosphere |
| 96 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 97 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 98 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 99 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 100 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 114 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 115 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 116 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 117 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 118 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 119 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 120 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 121 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 122 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 123 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 124 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 125 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 126 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 127 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 128 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 129 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 130 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 131 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 132 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 133 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 134 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 135 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 136 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 139 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 140 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 141 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 143 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 144 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 145 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 146 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 147 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 148 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 149 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 150 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 151 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 152 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 153 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 154 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 155 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 156 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 157 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 158 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 159 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 160 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 161 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 162 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 163 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 164 | 2643221670 | Streptomyces sp. Root431 | Isolate | Unclassified |
| 165 | 2808606700 | Arthrobacter agilis UMCV2 | Isolate | Rhizosphere |
| 166 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 167 | 2905926851 | Arthrobacter sedimenti MIC A30 | Isolate | Rhizosphere |
| 168 | 2912757875 | Streptomyces sp. S4.7 | Isolate | Rhizosphere |
| 169 | 2915358134 | Pseudonocardia pini CAP47R | Isolate | Unclassified |
| 170 | 2939598168 | Arthrobacter sp. 754 | Isolate | Rhizosphere |
| 171 | 2954691527 | Streptomyces sp. SAI-127 | Isolate | Rhizosphere |
| 172 | 2954701450 | Streptomyces sp. SAI-144 | Isolate | Rhizosphere |
| 173 | 2990088156 | Streptomyces albidus CAP 215 | Isolate | Unclassified |
| 174 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
| 175 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.81 |
| Metatranscriptomes | 0.48 |
| Isolates | 5.71 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.38 |
| Nodule | 0 |
| Rhizoplane | 12.38 |
| Rhizosphere | 77.14 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0466963_0033495 | 3300044694 | Bacteria | 3336 |
| 2 | JGI24738J21930_10041227 | 3300002075 | Bacteria | 938 |
| 3 | JGI24744J21845_10020780 | 3300002077 | Bacteria | 1293 |
| 4 | JGI25405J52794_10007744 | 3300003911 | Bacteria | 1989 |
| 5 | Ga0070683_100118214 | 3300005329 | Bacteria | 2503 |
| 6 | Ga0068869_100562623 | 3300005334 | Bacteria | 959 |
| 7 | Ga0068868_100023313 | 3300005338 | Bacteria | 4683 |
| 8 | Ga0068868_100973083 | 3300005338 | Bacteria | 775 |
| 9 | Ga0070689_100259502 | 3300005340 | Bacteria | 1436 |
| 10 | Ga0070691_10061843 | 3300005341 | Bacteria | 1802 |
| 11 | Ga0070687_100014070 | 3300005343 | Bacteria | 3585 |
| 12 | Ga0070692_10041798 | 3300005345 | Bacteria | 2350 |
| 13 | Ga0070673_100145817 | 3300005364 | Bacteria | 2001 |
| 14 | Ga0070659_100155762 | 3300005366 | Bacteria | 1866 |
| 15 | Ga0070701_10016170 | 3300005438 | Bacteria | 3462 |
| 16 | Ga0070700_100089300 | 3300005441 | Bacteria | 2008 |
| 17 | Ga0070708_100239390 | 3300005445 | Bacteria | 1704 |
| 18 | Ga0068867_100184034 | 3300005459 | Bacteria | 1663 |
| 19 | Ga0070685_10352653 | 3300005466 | Bacteria | 1006 |
| 20 | Ga0070672_100007439 | 3300005543 | Bacteria | 7430 |
| 21 | Ga0070686_100238088 | 3300005544 | Bacteria | 1324 |
| 22 | Ga0068857_100049308 | 3300005577 | Bacteria | 3736 |
| 23 | Ga0068857_100471329 | 3300005577 | Bacteria | 1176 |
| 24 | Ga0070702_100032842 | 3300005615 | Bacteria | 2850 |
| 25 | Ga0068852_100006939 | 3300005616 | Bacteria | 8240 |
| 26 | Ga0068864_100523166 | 3300005618 | Bacteria | 1144 |
| 27 | Ga0068861_100003938 | 3300005719 | Bacteria | 9929 |
| 28 | Ga0068851_10215177 | 3300005834 | Bacteria | 1078 |
| 29 | Ga0081455_10000310 | 3300005937 | Bacteria | 64261 |
| 30 | Ga0081538_10000408 | 3300005981 | Bacteria | 48764 |
| 31 | Ga0075365_10037061 | 3300006038 | Bacteria | 3164 |
| 32 | Ga0075434_100729316 | 3300006871 | Bacteria | 1008 |
| 33 | Ga0075429_100060811 | 3300006880 | Bacteria | 3290 |
| 34 | Ga0068865_100017995 | 3300006881 | Bacteria | 4554 |
| 35 | Ga0111539_10161770 | 3300009094 | Bacteria | 2618 |
| 36 | Ga0105245_10074103 | 3300009098 | Bacteria | 3097 |
| 37 | Ga0105245_10468884 | 3300009098 | Bacteria | 1271 |
| 38 | Ga0114129_10910547 | 3300009147 | Bacteria | 1114 |
| 39 | Ga0105243_10004045 | 3300009148 | Bacteria | 11679 |
| 40 | Ga0105243_10104569 | 3300009148 | Bacteria | 2357 |
| 41 | Ga0105242_10184918 | 3300009176 | Bacteria | 1841 |
| 42 | Ga0105242_10435748 | 3300009176 | Bacteria | 1232 |
| 43 | Ga0105248_10341524 | 3300009177 | Bacteria | 1686 |
| 44 | Ga0105238_10254972 | 3300009551 | Bacteria | 1733 |
| 45 | Ga0105249_10047638 | 3300009553 | Bacteria | 3906 |
| 46 | Ga0105249_10080604 | 3300009553 | Bacteria | 3024 |
| 47 | Ga0105246_10079529 | 3300011119 | Bacteria | 2331 |
| 48 | Ga0157369_10011739 | 3300013105 | Bacteria | 9946 |
| 49 | Ga0157369_10852210 | 3300013105 | Bacteria | 935 |
| 50 | Ga0157369_11639094 | 3300013105 | Bacteria | 654 |
| 51 | Ga0157378_10284329 | 3300013297 | Bacteria | 1595 |
| 52 | Ga0157372_10113718 | 3300013307 | Bacteria | 3102 |
| 53 | Ga0157380_10003720 | 3300014326 | Bacteria | 10488 |
| 54 | Ga0157380_10717019 | 3300014326 | Bacteria | 1007 |
| 55 | Ga0182008_10074200 | 3300014497 | Bacteria | 1674 |
| 56 | Ga0182008_10241058 | 3300014497 | Bacteria | 930 |
| 57 | Ga0157377_10044054 | 3300014745 | Bacteria | 2487 |
| 58 | Ga0157379_10063187 | 3300014968 | Bacteria | 3311 |
| 59 | Ga0157376_10336771 | 3300014969 | Bacteria | 1440 |
| 60 | Ga0163161_10637679 | 3300017792 | Bacteria | 882 |
| 61 | Ga0206354_11353164 | 3300020081 | Bacteria | 804 |
| 62 | Ga0213875_10006454 | 3300021388 | Bacteria | 6154 |
| 63 | Ga0207642_10317767 | 3300025899 | Bacteria | 908 |
| 64 | Ga0207688_10337494 | 3300025901 | Bacteria | 927 |
| 65 | Ga0207643_10003227 | 3300025908 | Bacteria | 8791 |
| 66 | Ga0207662_10108425 | 3300025918 | Bacteria | 1729 |
| 67 | Ga0207659_10229520 | 3300025926 | Bacteria | 1496 |
| 68 | Ga0207687_10122324 | 3300025927 | Bacteria | 1948 |
| 69 | Ga0207687_10381175 | 3300025927 | Bacteria | 1155 |
| 70 | Ga0207644_10675111 | 3300025931 | Bacteria | 861 |
| 71 | Ga0207690_10087997 | 3300025932 | Bacteria | 2187 |
| 72 | Ga0207686_10228475 | 3300025934 | Bacteria | 1348 |
| 73 | Ga0207709_10029494 | 3300025935 | Bacteria | 3184 |
| 74 | Ga0207709_10051126 | 3300025935 | Bacteria | 2531 |
| 75 | Ga0207704_10041607 | 3300025938 | Bacteria | 2696 |
| 76 | Ga0207691_10014789 | 3300025940 | Bacteria | 7436 |
| 77 | Ga0207711_10154417 | 3300025941 | Bacteria | 2073 |
| 78 | Ga0207689_10171427 | 3300025942 | Bacteria | 1789 |
| 79 | Ga0207679_10627563 | 3300025945 | Bacteria | 970 |
| 80 | Ga0207712_10147461 | 3300025961 | Bacteria | 1813 |
| 81 | Ga0207708_10007838 | 3300026075 | Bacteria | 7910 |
| 82 | Ga0207648_10012054 | 3300026089 | Bacteria | 8108 |
| 83 | Ga0207674_10220720 | 3300026116 | Bacteria | 1843 |
| 84 | Ga0207675_100007523 | 3300026118 | Bacteria | 10291 |
| 85 | Ga0207683_11063125 | 3300026121 | Bacteria | 751 |
| 86 | Ga0207698_10027462 | 3300026142 | Bacteria | 4041 |
| 87 | Ga0268266_10289323 | 3300028379 | Bacteria | 1526 |
| 88 | Ga0307515_10171564 | 3300028794 | Bacteria | 2159 |
| 89 | Ga0307514_10061799 | 3300031649 | Bacteria | 2851 |
| 90 | Ga0307416_100061261 | 3300032002 | Bacteria | 3070 |
| 91 | Ga0307415_100870445 | 3300032126 | Bacteria | 828 |
| 92 | Ga0373953_0021760 | 3300035117 | Bacteria | 2410 |
| 93 | Ga0373962_0150546 | 3300035242 | Bacteria | 762 |
| 94 | Ga0373935_0225439 | 3300035692 | Bacteria | 1303 |
| 95 | Ga0373933_0031449 | 3300035724 | Bacteria | 3079 |
| 96 | Ga0373947_0214327 | 3300035725 | Bacteria | 1264 |
| 97 | Ga0395900_0101805 | 3300037418 | Bacteria | 2950 |
| 98 | Ga0395901_0047265 | 3300038443 | Bacteria | 4469 |
| 99 | Ga0439466_0101431 | 3300041411 | Bacteria | 897 |
| 100 | Ga0439433_0083859 | 3300041999 | Bacteria | 777 |
| 101 | Ga0439442_000209 | 3300042002 | Bacteria | 14559 |
| 102 | Ga0439442_026463 | 3300042002 | Bacteria | 1207 |
| 103 | Ga0439432_022455 | 3300042006 | Bacteria | 2084 |
| 104 | Ga0439462_0103550 | 3300042015 | Bacteria | 785 |
| 105 | Ga0450920_000213 | 3300042122 | Bacteria | 8617 |
| 106 | Ga0450907_000312 | 3300042146 | Bacteria | 16154 |
| 107 | Ga0439434_0000045 | 3300042435 | Bacteria | 29721 |
| 108 | Ga0450918_012070 | 3300042531 | Bacteria | 1505 |
| 109 | Ga0466965_0004857 | 3300044683 | Bacteria | 6001 |
| 110 | Ga0466966_0124172 | 3300044684 | Bacteria | 1584 |
| 111 | Ga0466970_0008039 | 3300044765 | Bacteria | 5295 |
| 112 | Ga0466970_0281344 | 3300044765 | Bacteria | 936 |
| 113 | Ga0466967_0000288 | 3300045976 | Bacteria | 22449 |
| 114 | Ga0466967_0029483 | 3300045976 | Bacteria | 4593 |
| 115 | Ga0466967_0143868 | 3300045976 | Bacteria | 2223 |
| 116 | Ga0495603_0232751 | 3300046455 | Bacteria | 1062 |
| 117 | Ga0495629_0043692 | 3300046459 | Bacteria | 3146 |
| 118 | Ga0495580_0035690 | 3300046472 | Bacteria | 3574 |
| 119 | Ga0495582_0120528 | 3300046473 | Bacteria | 1478 |
| 120 | Ga0495582_0227244 | 3300046473 | Bacteria | 1068 |
| 121 | Ga0495639_0247768 | 3300046475 | Bacteria | 880 |
| 122 | Ga0495662_0153277 | 3300046476 | Bacteria | 1135 |
| 123 | Ga0495630_0110816 | 3300046517 | Bacteria | 2079 |
| 124 | Ga0495625_0094387 | 3300046660 | Bacteria | 2064 |
| 125 | Ga0495599_0095115 | 3300046678 | Bacteria | 1858 |
| 126 | Ga0495647_0232852 | 3300046681 | Bacteria | 816 |
| 127 | Ga0495674_0158067 | 3300047319 | Bacteria | 1898 |
| 128 | Ga0495674_0428357 | 3300047319 | Bacteria | 1065 |
| 129 | Ga0495675_0006456 | 3300047444 | Bacteria | 7178 |
| 130 | Ga0495675_0051520 | 3300047444 | Bacteria | 2614 |
| 131 | Ga0495684_0577718 | 3300047471 | Bacteria | 761 |
| 132 | Ga0496100_0397972 | 3300048903 | Bacteria | 1048 |
| 133 | Ga0496101_0002240 | 3300048904 | Bacteria | 11827 |
| 134 | Ga0496102_0000236 | 3300048905 | Bacteria | 72601 |
| 135 | Ga0496102_0078285 | 3300048905 | Bacteria | 3043 |
| 136 | Ga0496102_0337864 | 3300048905 | Bacteria | 1419 |
| 137 | Ga0496103_0002325 | 3300048906 | Bacteria | 12014 |
| 138 | Ga0496103_0090581 | 3300048906 | Bacteria | 1930 |
| 139 | Ga0496103_0129880 | 3300048906 | Bacteria | 1609 |
| 140 | Ga0496105_0019524 | 3300048908 | Bacteria | 5468 |
| 141 | Ga0496105_0442917 | 3300048908 | Bacteria | 1026 |
| 142 | Ga0496106_0386079 | 3300048909 | Bacteria | 1125 |
| 143 | Ga0496107_0196286 | 3300048910 | Bacteria | 1500 |
| 144 | Ga0496108_0068430 | 3300048911 | Bacteria | 2996 |
| 145 | Ga0496108_0110974 | 3300048911 | Bacteria | 2345 |
| 146 | Ga0496109_0197714 | 3300048912 | Bacteria | 1890 |
| 147 | Ga0496109_0248108 | 3300048912 | Bacteria | 1676 |
| 148 | Ga0496109_0959114 | 3300048912 | Bacteria | 793 |
| 149 | Ga0496110_0007101 | 3300048913 | Bacteria | 8917 |
| 150 | Ga0496110_0062036 | 3300048913 | Bacteria | 3301 |
| 151 | Ga0496110_0826221 | 3300048913 | Bacteria | 831 |
| 152 | Ga0496111_0020073 | 3300048914 | Bacteria | 4648 |
| 153 | Ga0496111_0380877 | 3300048914 | Bacteria | 1043 |
| 154 | Ga0496112_0005899 | 3300048915 | Bacteria | 10678 |
| 155 | Ga0496113_0739692 | 3300048916 | Bacteria | 784 |
| 156 | Ga0496114_0109470 | 3300048917 | Bacteria | 2366 |
| 157 | Ga0496114_0179396 | 3300048917 | Bacteria | 1849 |
| 158 | Ga0496116_0000340 | 3300048919 | Bacteria | 74829 |
| 159 | Ga0496117_0000204 | 3300048920 | Bacteria | 116843 |
| 160 | Ga0496118_0007116 | 3300048921 | Bacteria | 12004 |
| 161 | Ga0496119_0000340 | 3300048922 | Bacteria | 65290 |
| 162 | Ga0496120_0003564 | 3300048923 | Bacteria | 14057 |
| 163 | Ga0496121_0027465 | 3300048924 | Bacteria | 5326 |
| 164 | Ga0496124_0016448 | 3300048927 | Bacteria | 7030 |
| 165 | Ga0496125_0017243 | 3300048928 | Bacteria | 6898 |
| 166 | Ga0496126_0000547 | 3300048929 | Bacteria | 72557 |
| 167 | Ga0501031_0028277 | 3300049568 | Bacteria | 3654 |
| 168 | Ga0501034_0454379 | 3300049571 | Bacteria | 1198 |
| 169 | Ga0501036_0065103 | 3300049572 | Bacteria | 3085 |
| 170 | Ga0501036_0323172 | 3300049572 | Bacteria | 1289 |
| 171 | Ga0501037_0090203 | 3300049573 | Bacteria | 2217 |
| 172 | Ga0501038_0082652 | 3300049574 | Bacteria | 2704 |
| 173 | Ga0501040_0185850 | 3300049576 | Bacteria | 1474 |
| 174 | Ga0501042_0029754 | 3300049578 | Bacteria | 3853 |
| 175 | Ga0501043_0037790 | 3300049579 | Bacteria | 3797 |
| 176 | Ga0501046_0070502 | 3300049580 | Bacteria | 2717 |
| 177 | Ga0501047_0103411 | 3300049581 | Bacteria | 2728 |
| 178 | Ga0501048_0017981 | 3300049582 | Bacteria | 5201 |
| 179 | Ga0501048_0273217 | 3300049582 | Bacteria | 1201 |
| 180 | Ga0501067_0072665 | 3300049583 | Bacteria | 1905 |
| 181 | Ga0501068_0164098 | 3300049584 | Bacteria | 1401 |
| 182 | Ga0501070_0178912 | 3300049586 | Bacteria | 1746 |
| 183 | Ga0501076_0194242 | 3300049592 | Bacteria | 1657 |
| 184 | Ga0501077_0526771 | 3300049593 | Bacteria | 758 |
| 185 | Ga0501083_0279379 | 3300049744 | Bacteria | 1086 |
| 186 | Ga0501035_0080170 | 3300049822 | Bacteria | 2882 |
| 187 | Ga0501044_0161798 | 3300049823 | Bacteria | 2214 |
| 188 | Ga0501044_0217038 | 3300049823 | Bacteria | 1864 |
| 189 | nmdc:mga0yw44_91868_c1 | 3300050492 | Bacteria | 1920 |
| 190 | nmdc:mga07m45_413617_c1 | 3300050496 | Bacteria | 782 |
| 191 | nmdc:mga0n895_235637_c1 | 3300050512 | Bacteria | 1857 |
| 192 | Ga0495601_0067792 | 3300053077 | Bacteria | 2273 |
| 193 | Ga0495612_0055300 | 3300053078 | Bacteria | 1636 |
| 194 | Ga0495619_0650766 | 3300053085 | Bacteria | 719 |
| 195 | Ga0500641_0077519 | 3300053096 | Bacteria | 1407 |
| 196 | Ga0500573_0116959 | 3300053140 | Bacteria | 1487 |
| 197 | Ga0501084_0418289 | 3300054114 | Bacteria | 1133 |
| 198 | Ga0501084_0767581 | 3300054114 | Bacteria | 812 |
| 199 | 2644389506 | 2643221670 | Bacteria | 6497041 |
| 200 | 2810362907 | 2808606700 | Bacteria | 3482157 |
| 201 | 2866555463 | 2866552031 | Bacteria | 5824618 |
| 202 | 2905928351 | 2905926851 | Bacteria | 4423176 |
| 203 | 2912762246 | 2912757875 | Bacteria | 7940295 |
| 204 | 2915359455 | 2915358134 | Bacteria | 6050864 |
| 205 | 2939599696 | 2939598168 | Bacteria | 4687164 |
| 206 | 2954695440 | 2954691527 | Bacteria | 10720516 |
| 207 | 2954710633 | 2954701450 | Bacteria | 10834262 |
| 208 | 2990093869 | 2990088156 | Bacteria | 6657676 |
| 209 | 8047717662 | 8047710418 | Bacteria | 11023148 |
| 210 | 8056208496 | 8056207758 | Bacteria | 8639239 |
| 211 | Ga0466963_0033495 | |||
| 212 | JGI24738J21930_10041227 | |||
| 213 | JGI24744J21845_10020780 | |||
| 214 | JGI25405J52794_10007744 | |||
| 215 | Ga0070683_100118214 | |||
| 216 | Ga0068869_100562623 | |||
| 217 | Ga0068868_100023313 | |||
| 218 | Ga0068868_100973083 | |||
| 219 | Ga0070689_100259502 | |||
| 220 | Ga0070691_10061843 | |||
| 221 | Ga0070687_100014070 | |||
| 222 | Ga0070692_10041798 | |||
| 223 | Ga0070673_100145817 | |||
| 224 | Ga0070659_100155762 | |||
| 225 | Ga0070701_10016170 | |||
| 226 | Ga0070700_100089300 | |||
| 227 | Ga0070708_100239390 | |||
| 228 | Ga0068867_100184034 | |||
| 229 | Ga0070685_10352653 | |||
| 230 | Ga0070672_100007439 | |||
| 231 | Ga0070686_100238088 | |||
| 232 | Ga0068857_100049308 | |||
| 233 | Ga0068857_100471329 | |||
| 234 | Ga0070702_100032842 | |||
| 235 | Ga0068852_100006939 | |||
| 236 | Ga0068864_100523166 | |||
| 237 | Ga0068861_100003938 | |||
| 238 | Ga0068851_10215177 | |||
| 239 | Ga0081455_10000310 | |||
| 240 | Ga0081538_10000408 | |||
| 241 | Ga0075365_10037061 | |||
| 242 | Ga0075434_100729316 | |||
| 243 | Ga0075429_100060811 | |||
| 244 | Ga0068865_100017995 | |||
| 245 | Ga0111539_10161770 | |||
| 246 | Ga0105245_10074103 | |||
| 247 | Ga0105245_10468884 | |||
| 248 | Ga0114129_10910547 | |||
| 249 | Ga0105243_10004045 | |||
| 250 | Ga0105243_10104569 | |||
| 251 | Ga0105242_10184918 | |||
| 252 | Ga0105242_10435748 | |||
| 253 | Ga0105248_10341524 | |||
| 254 | Ga0105238_10254972 | |||
| 255 | Ga0105249_10047638 | |||
| 256 | Ga0105249_10080604 | |||
| 257 | Ga0105246_10079529 | |||
| 258 | Ga0157369_10011739 | |||
| 259 | Ga0157369_10852210 | |||
| 260 | Ga0157369_11639094 | |||
| 261 | Ga0157378_10284329 | |||
| 262 | Ga0157372_10113718 | |||
| 263 | Ga0157380_10003720 | |||
| 264 | Ga0157380_10717019 | |||
| 265 | Ga0182008_10074200 | |||
| 266 | Ga0182008_10241058 | |||
| 267 | Ga0157377_10044054 | |||
| 268 | Ga0157379_10063187 | |||
| 269 | Ga0157376_10336771 | |||
| 270 | Ga0163161_10637679 | |||
| 271 | Ga0206354_11353164 | |||
| 272 | Ga0213875_10006454 | |||
| 273 | Ga0207642_10317767 | |||
| 274 | Ga0207688_10337494 | |||
| 275 | Ga0207643_10003227 | |||
| 276 | Ga0207662_10108425 | |||
| 277 | Ga0207659_10229520 | |||
| 278 | Ga0207687_10122324 | |||
| 279 | Ga0207687_10381175 | |||
| 280 | Ga0207644_10675111 | |||
| 281 | Ga0207690_10087997 | |||
| 282 | Ga0207686_10228475 | |||
| 283 | Ga0207709_10029494 | |||
| 284 | Ga0207709_10051126 | |||
| 285 | Ga0207704_10041607 | |||
| 286 | Ga0207691_10014789 | |||
| 287 | Ga0207711_10154417 | |||
| 288 | Ga0207689_10171427 | |||
| 289 | Ga0207679_10627563 | |||
| 290 | Ga0207712_10147461 | |||
| 291 | Ga0207708_10007838 | |||
| 292 | Ga0207648_10012054 | |||
| 293 | Ga0207674_10220720 | |||
| 294 | Ga0207675_100007523 | |||
| 295 | Ga0207683_11063125 | |||
| 296 | Ga0207698_10027462 | |||
| 297 | Ga0268266_10289323 | |||
| 298 | Ga0307515_10171564 | |||
| 299 | Ga0307514_10061799 | |||
| 300 | Ga0307416_100061261 | |||
| 301 | Ga0307415_100870445 | |||
| 302 | Ga0373953_0021760 | |||
| 303 | Ga0373962_0150546 | |||
| 304 | Ga0373935_0225439 | |||
| 305 | Ga0373933_0031449 | |||
| 306 | Ga0373947_0214327 | |||
| 307 | Ga0395900_0101805 | |||
| 308 | Ga0395901_0047265 | |||
| 309 | Ga0439466_0101431 | |||
| 310 | Ga0439433_0083859 | |||
| 311 | Ga0439442_000209 | |||
| 312 | Ga0439442_026463 | |||
| 313 | Ga0439432_022455 | |||
| 314 | Ga0439462_0103550 | |||
| 315 | Ga0450920_000213 | |||
| 316 | Ga0450907_000312 | |||
| 317 | Ga0439434_0000045 | |||
| 318 | Ga0450918_012070 | |||
| 319 | Ga0466965_0004857 | |||
| 320 | Ga0466966_0124172 | |||
| 321 | Ga0466970_0008039 | |||
| 322 | Ga0466970_0281344 | |||
| 323 | Ga0466967_0000288 | |||
| 324 | Ga0466967_0029483 | |||
| 325 | Ga0466967_0143868 | |||
| 326 | Ga0495603_0232751 | |||
| 327 | Ga0495629_0043692 | |||
| 328 | Ga0495580_0035690 | |||
| 329 | Ga0495582_0120528 | |||
| 330 | Ga0495582_0227244 | |||
| 331 | Ga0495639_0247768 | |||
| 332 | Ga0495662_0153277 | |||
| 333 | Ga0495630_0110816 | |||
| 334 | Ga0495625_0094387 | |||
| 335 | Ga0495599_0095115 | |||
| 336 | Ga0495647_0232852 | |||
| 337 | Ga0495674_0158067 | |||
| 338 | Ga0495674_0428357 | |||
| 339 | Ga0495675_0006456 | |||
| 340 | Ga0495675_0051520 | |||
| 341 | Ga0495684_0577718 | |||
| 342 | Ga0496100_0397972 | |||
| 343 | Ga0496101_0002240 | |||
| 344 | Ga0496102_0000236 | |||
| 345 | Ga0496102_0078285 | |||
| 346 | Ga0496102_0337864 | |||
| 347 | Ga0496103_0002325 | |||
| 348 | Ga0496103_0090581 | |||
| 349 | Ga0496103_0129880 | |||
| 350 | Ga0496105_0019524 | |||
| 351 | Ga0496105_0442917 | |||
| 352 | Ga0496106_0386079 | |||
| 353 | Ga0496107_0196286 | |||
| 354 | Ga0496108_0068430 | |||
| 355 | Ga0496108_0110974 | |||
| 356 | Ga0496109_0197714 | |||
| 357 | Ga0496109_0248108 | |||
| 358 | Ga0496109_0959114 | |||
| 359 | Ga0496110_0007101 | |||
| 360 | Ga0496110_0062036 | |||
| 361 | Ga0496110_0826221 | |||
| 362 | Ga0496111_0020073 | |||
| 363 | Ga0496111_0380877 | |||
| 364 | Ga0496112_0005899 | |||
| 365 | Ga0496113_0739692 | |||
| 366 | Ga0496114_0109470 | |||
| 367 | Ga0496114_0179396 | |||
| 368 | Ga0496116_0000340 | |||
| 369 | Ga0496117_0000204 | |||
| 370 | Ga0496118_0007116 | |||
| 371 | Ga0496119_0000340 | |||
| 372 | Ga0496120_0003564 | |||
| 373 | Ga0496121_0027465 | |||
| 374 | Ga0496124_0016448 | |||
| 375 | Ga0496125_0017243 | |||
| 376 | Ga0496126_0000547 | |||
| 377 | Ga0501031_0028277 | |||
| 378 | Ga0501034_0454379 | |||
| 379 | Ga0501036_0065103 | |||
| 380 | Ga0501036_0323172 | |||
| 381 | Ga0501037_0090203 | |||
| 382 | Ga0501038_0082652 | |||
| 383 | Ga0501040_0185850 | |||
| 384 | Ga0501042_0029754 | |||
| 385 | Ga0501043_0037790 | |||
| 386 | Ga0501046_0070502 | |||
| 387 | Ga0501047_0103411 | |||
| 388 | Ga0501048_0017981 | |||
| 389 | Ga0501048_0273217 | |||
| 390 | Ga0501067_0072665 | |||
| 391 | Ga0501068_0164098 | |||
| 392 | Ga0501070_0178912 | |||
| 393 | Ga0501076_0194242 | |||
| 394 | Ga0501077_0526771 | |||
| 395 | Ga0501083_0279379 | |||
| 396 | Ga0501035_0080170 | |||
| 397 | Ga0501044_0161798 | |||
| 398 | Ga0501044_0217038 | |||
| 399 | nmdc:mga0yw44_91868_c1 | |||
| 400 | nmdc:mga07m45_413617_c1 | |||
| 401 | nmdc:mga0n895_235637_c1 | |||
| 402 | Ga0495601_0067792 | |||
| 403 | Ga0495612_0055300 | |||
| 404 | Ga0495619_0650766 | |||
| 405 | Ga0500641_0077519 | |||
| 406 | Ga0500573_0116959 | |||
| 407 | Ga0501084_0418289 | |||
| 408 | Ga0501084_0767581 | |||
| 409 | 2644389506 | |||
| 410 | 2810362907 | |||
| 411 | 2866555463 | |||
| 412 | 2905928351 | |||
| 413 | 2912762246 | |||
| 414 | 2915359455 | |||
| 415 | 2939599696 | |||
| 416 | 2954695440 | |||
| 417 | 2954710633 | |||
| 418 | 2990093869 | |||
| 419 | 8047717662 | |||
| 420 | 8056208496 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1c2t-assembly1.cif.gz_A | new insights into inhibitor design from the crystal structure and nmr studies of e. coli gar transformylase in complex with beta-gar and 10-formyl-5,8,10-trideazafolic acid. | 0.9736 | 2 | 195 |
| 2ywr-assembly1.cif.gz_A | crystal structure of gar transformylase from aquifex aeolicus | 0.9722 | 2 | 195 |
| 3tqr-assembly1.cif.gz_A | structure of the phosphoribosylglycinamide formyltransferase (purn) in complex with ches from coxiella burnetii | 0.9695 | 2 | 195 |
| 3p9x-assembly1.cif.gz_B | crystal structure of phosphoribosylglycinamide formyltransferase from bacillus halodurans | 0.969 | 2 | 182 |
| 4ds3-assembly1.cif.gz_A-2 | crystal structure of phosphoribosylglycinamide formyltransferase from brucella melitensis | 0.9677 | 2 | 182 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q20143_783_975_3.40.50.170 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain | 0.9711 | 2 | 183 | 3.40.50.170 |
| 3dcjA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain | 0.9695 | 2 | 195 | 3.40.50.170 |
| 4ds3A00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain | 0.9677 | 2 | 182 | 3.40.50.170 |
| 2ywrA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain | 0.9635 | 2 | 195 | 3.40.50.170 |
| 4s1nA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain | 0.9614 | 2 | 181 | 3.40.50.170 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6N7GJS9-F1-model_v4 | Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART) | 0.996 | 2 | 196 |
GO:0004644
GO:0005829 GO:0006189 |
| AF-A0A2W2BDY8-F1-model_v4 | Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART) | 0.9955 | 2 | 195 |
GO:0004644
GO:0005829 GO:0006189 |
| AF-A0A1N6PZS9-F1-model_v4 | Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART) | 0.9939 | 2 | 195 |
GO:0004644
GO:0005829 GO:0006189 |
| AF-A0A7Y0GWB6-F1-model_v4 | Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART) | 0.9936 | 2 | 195 |
GO:0004644
GO:0005829 GO:0006189 |
| AF-A0A6L6API4-F1-model_v4 | deleted | 0.9932 | 2 | 197 |
|