F318937

General Info

Members Datasets Scaffolds Average Seq Length
209 134 418 156

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10193920|Ga0075364_101939202
Length 184
Sequence VNPHAEATRGGHNHPMPSDAPVHRYRTQVTWQGSTGVGYDHYDRTHRAATIPATVDLELASDPTFRGDPTKLNPEELLVLAATSCQLLSFLAIAARARVDVVAYRDDAEAEMPEGEKPVRITRITLRPQITVRVARDRSEEQERARIERLVALGHQECYVANSLRTDVIVEPTVTFIDASAALP

Samples

Sample ID Description Type Environment
1 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
71 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
75 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
81 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
82 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
83 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
84 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
85 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
86 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
87 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
88 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
89 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
92 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
95 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
96 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
97 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
102 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
117 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
118 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
119 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
121 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
124 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
128 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
129 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
130 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
131 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
132 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
133 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
134 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.22
Metatranscriptomes 2.87
Isolates 1.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.74
Nodule 0
Rhizoplane 5.26
Rhizosphere 83.73
Stem 0
Stem Tuber 0
Unclassified 8.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075364_10193920 3300006051 Bacteria 1376
2 JGI25407J50210_10000115 3300003373 Bacteria 11473
3 JGI25407J50210_10019522 3300003373 Bacteria 1762
4 JGI25407J50210_10103953 3300003373 Bacteria 701
5 Ga0070658_10095639 3300005327 Unclassified 2452
6 Ga0070683_100007296 3300005329 Bacteria 9327
7 Ga0070683_100082140 3300005329 Unclassified 3017
8 Ga0070680_100019299 3300005336 Bacteria 5402
9 Ga0070680_100210120 3300005336 Bacteria 1642
10 Ga0070682_100041971 3300005337 Bacteria 2822
11 Ga0070682_100138582 3300005337 Bacteria 1656
12 Ga0070660_100020881 3300005339 Bacteria 4821
13 Ga0070661_100029252 3300005344 Bacteria 3975
14 Ga0070692_10136091 3300005345 Bacteria 1386
15 Ga0070692_10181732 3300005345 Unclassified 1219
16 Ga0070659_100000077 3300005366 Bacteria 76934
17 Ga0070659_100001945 3300005366 Bacteria 14757
18 Ga0070714_100006161 3300005435 Bacteria 9221
19 Ga0070710_10000008 3300005437 Bacteria 198148
20 Ga0070711_100209456 3300005439 Bacteria 1509
21 Ga0070708_100279732 3300005445 Bacteria 1570
22 Ga0070681_10058245 3300005458 Bacteria 3843
23 Ga0070681_10691301 3300005458 Bacteria 936
24 Ga0070706_100021891 3300005467 Bacteria 5886
25 Ga0070698_100015166 3300005471 Bacteria 8149
26 Ga0070679_100027996 3300005530 Bacteria 5553
27 Ga0070679_100108726 3300005530 Bacteria 2759
28 Ga0070679_100168937 3300005530 Unclassified 2160
29 Ga0070679_100367949 3300005530 Bacteria 1385
30 Ga0070679_100656136 3300005530 Bacteria 992
31 Ga0070679_100929023 3300005530 Unclassified 814
32 Ga0070684_100021940 3300005535 Bacteria 5319
33 Ga0070684_100025481 3300005535 Bacteria 4973
34 Ga0070697_100059103 3300005536 Bacteria 3121
35 Ga0070697_100955875 3300005536 Bacteria 761
36 Ga0070697_102066164 3300005536 Bacteria 510
37 Ga0068857_100142948 3300005577 Bacteria 2164
38 Ga0068854_101183532 3300005578 Bacteria 684
39 Ga0068856_100206341 3300005614 Unclassified 1980
40 Ga0068852_100016919 3300005616 Bacteria 5704
41 Ga0081455_10019369 3300005937 Bacteria 6440
42 Ga0081455_10069281 3300005937 Bacteria 2934
43 Ga0081538_10000143 3300005981 Bacteria 73830
44 Ga0081538_10000621 3300005981 Bacteria 39454
45 Ga0081538_10001061 3300005981 Bacteria 29289
46 Ga0081538_10001370 3300005981 Bacteria 25079
47 Ga0081538_10002815 3300005981 Bacteria 16647
48 Ga0081538_10008799 3300005981 Bacteria 8508
49 Ga0081538_10009947 3300005981 Bacteria 7857
50 Ga0081538_10011511 3300005981 Bacteria 7160
51 Ga0081538_10018918 3300005981 Bacteria 5147
52 Ga0081538_10031085 3300005981 Bacteria 3610
53 Ga0081538_10067232 3300005981 Bacteria 2002
54 Ga0081538_10224520 3300005981 Bacteria 741
55 Ga0070717_10000004 3300006028 Bacteria 365525
56 Ga0075365_10195063 3300006038 Bacteria 1417
57 Ga0075365_10290883 3300006038 Bacteria 1149
58 Ga0075363_100063715 3300006048 Bacteria 1991
59 Ga0075363_100333370 3300006048 Bacteria 884
60 Ga0075363_100552177 3300006048 Bacteria 687
61 Ga0070712_100712960 3300006175 Bacteria 856
62 Ga0075367_10058797 3300006178 Bacteria 2288
63 Ga0075367_10139886 3300006178 Bacteria 1499
64 Ga0075428_100046703 3300006844 Bacteria 4755
65 Ga0075428_100299841 3300006844 Bacteria 1728
66 Ga0075430_100012950 3300006846 Bacteria 7109
67 Ga0075430_100039382 3300006846 Bacteria 4002
68 Ga0075430_100189137 3300006846 Bacteria 1711
69 Ga0075430_100957885 3300006846 Bacteria 705
70 Ga0075431_100006364 3300006847 Bacteria 11723
71 Ga0075431_100299923 3300006847 Bacteria 1623
72 Ga0075431_101063659 3300006847 Bacteria 775
73 Ga0075429_100012966 3300006880 Bacteria 7232
74 Ga0075429_100043408 3300006880 Bacteria 3912
75 Ga0105240_10086474 3300009093 Bacteria 3840
76 Ga0114129_10003484 3300009147 Bacteria 22125
77 Ga0114129_10235264 3300009147 Bacteria 2465
78 Ga0114129_10765259 3300009147 Bacteria 1235
79 Ga0105243_10809863 3300009148 Bacteria 924
80 Ga0105237_10029758 3300009545 Bacteria 5549
81 Ga0105238_10007373 3300009551 Bacteria 11016
82 Ga0105239_10090098 3300010375 Bacteria 3384
83 Ga0105246_10335088 3300011119 Bacteria 1234
84 Ga0157370_10039495 3300013104 Bacteria 4561
85 Ga0157369_10005185 3300013105 Bacteria 15231
86 Ga0157372_10011653 3300013307 Bacteria 9358
87 Ga0157375_10437572 3300013308 Bacteria 1473
88 Ga0157375_10642699 3300013308 Bacteria 1218
89 Ga0157380_10787379 3300014326 Bacteria 966
90 Ga0157376_10014343 3300014969 Bacteria 5945
91 Ga0206356_11140387 3300020070 Unclassified 930
92 Ga0206354_10367037 3300020081 Bacteria 2142
93 Ga0206353_10273610 3300020082 Bacteria 1055
94 Ga0206353_11232889 3300020082 Bacteria 4669
95 Ga0206353_11302426 3300020082 Bacteria 1277
96 Ga0206353_11839352 3300020082 Bacteria 1848
97 Ga0213876_10199926 3300021384 Bacteria 1062
98 Ga0213876_10412147 3300021384 Bacteria 719
99 Ga0207692_10000034 3300025898 Bacteria 45780
100 Ga0207705_10345986 3300025909 Bacteria 1145
101 Ga0207684_10210490 3300025910 Bacteria 1677
102 Ga0207707_10008325 3300025912 Bacteria 8997
103 Ga0207707_10461011 3300025912 Bacteria 1087
104 Ga0207695_10111115 3300025913 Bacteria 2720
105 Ga0207663_10108749 3300025916 Bacteria 1878
106 Ga0207660_10021887 3300025917 Bacteria 4303
107 Ga0207660_10394105 3300025917 Bacteria 1114
108 Ga0207657_10041306 3300025919 Bacteria 4079
109 Ga0207657_10172330 3300025919 Bacteria 1753
110 Ga0207649_10023642 3300025920 Bacteria 3562
111 Ga0207652_10042785 3300025921 Bacteria 3857
112 Ga0207652_10318583 3300025921 Bacteria 1404
113 Ga0207652_10777469 3300025921 Bacteria 851
114 Ga0207652_11264461 3300025921 Bacteria 640
115 Ga0207646_10051343 3300025922 Bacteria 3690
116 Ga0207694_10208555 3300025924 Unclassified 1591
117 Ga0207690_10039975 3300025932 Bacteria 3063
118 Ga0207661_10001164 3300025944 Bacteria 17570
119 Ga0207661_10024210 3300025944 Bacteria 4598
120 Ga0207661_10392409 3300025944 Bacteria 1258
121 Ga0207640_10024504 3300025981 Bacteria 3641
122 Ga0207702_10141064 3300026078 Unclassified 2180
123 Ga0207698_10037868 3300026142 Bacteria 3557
124 Ga0316575_10052417 3300031665 Bacteria 1625
125 Ga0307406_10883906 3300031901 Bacteria 760
126 Ga0307412_10822659 3300031911 Bacteria 808
127 Ga0307416_100175593 3300032002 Bacteria 2001
128 Ga0307416_100588719 3300032002 Bacteria 1191
129 Ga0307411_11948590 3300032005 Bacteria 548
130 Ga0307415_100499864 3300032126 Bacteria 1063
131 Ga0395900_0084697 3300037418 Bacteria 3258
132 Ga0395898_0282167 3300037466 Bacteria 1584
133 Ga0395898_0426262 3300037466 Bacteria 1264
134 Ga0395901_0014780 3300038443 Bacteria 7932
135 Ga0395901_0031880 3300038443 Bacteria 5434
136 Ga0395901_0055991 3300038443 Bacteria 4102
137 Ga0395901_0301125 3300038443 Bacteria 1662
138 Ga0436365_0941304 3300039437 Bacteria 2660
139 Ga0436363_0021843 3300039450 Bacteria 1332
140 Ga0451791_0561277 3300041451 Bacteria 669
141 Ga0451797_1260700 3300041453 Bacteria 1012
142 Ga0451833_0287494 3300041491 Bacteria 910
143 Ga0451843_0430342 3300041509 Bacteria 2430
144 Ga0451853_1151180 3300041512 Bacteria 709
145 Ga0439463_012721 3300042016 Bacteria 2069
146 Ga0466965_0326913 3300044683 Unclassified 836
147 Ga0466968_0152202 3300044735 Bacteria 1064
148 Ga0466960_0018281 3300044901 Bacteria 3069
149 Ga0466960_0968144 3300044901 Unclassified 522
150 Ga0466967_0059222 3300045976 Bacteria 3389
151 Ga0466967_0433160 3300045976 Unclassified 1283
152 Ga0466967_1125743 3300045976 Bacteria 782
153 Ga0495650_0032180 3300046471 Bacteria 2349
154 Ga0495580_0144493 3300046472 Bacteria 1649
155 Ga0495630_0290775 3300046517 Bacteria 1249
156 Ga0495661_0359037 3300046665 Unclassified 716
157 Ga0495657_0193038 3300046675 Unclassified 1244
158 Ga0495670_0210206 3300046691 Bacteria 1032
159 Ga0495589_0201362 3300046794 Bacteria 940
160 Ga0496100_0048250 3300048903 Bacteria 2748
161 Ga0496101_0022272 3300048904 Bacteria 4361
162 Ga0496102_0120650 3300048905 Bacteria 2448
163 Ga0496102_0126248 3300048905 Bacteria 2392
164 Ga0496102_0213970 3300048905 Unclassified 1817
165 Ga0496103_0010687 3300048906 Bacteria 5431
166 Ga0496103_0697803 3300048906 Unclassified 643
167 Ga0496112_0991109 3300048915 Bacteria 760
168 Ga0496114_0054547 3300048917 Bacteria 3333
169 Ga0496126_0002996 3300048929 Bacteria 21933
170 Ga0501034_0017382 3300049571 Bacteria 7377
171 Ga0501038_0482281 3300049574 Bacteria 950
172 Ga0501039_0162454 3300049575 Bacteria 1756
173 Ga0501040_0155244 3300049576 Bacteria 1616
174 Ga0501041_0445070 3300049577 Bacteria 822
175 Ga0501042_0212514 3300049578 Bacteria 1395
176 Ga0501046_0330510 3300049580 Bacteria 1109
177 Ga0501048_0660386 3300049582 Unclassified 751
178 Ga0501048_1098313 3300049582 Unclassified 572
179 Ga0501070_0311795 3300049586 Bacteria 1281
180 Ga0501072_0084093 3300049588 Bacteria 2523
181 Ga0501075_0031583 3300049591 Bacteria 3932
182 Ga0501075_0259965 3300049591 Bacteria 1323
183 Ga0501079_0027162 3300049741 Bacteria 4388
184 Ga0501081_0256020 3300049743 Bacteria 1278
185 Ga0501083_0091027 3300049744 Bacteria 2014
186 Ga0501035_0608325 3300049822 Bacteria 890
187 nmdc:mga03n38_208600_c1 3300050490 Bacteria 1014
188 nmdc:mga03n38_616633_c1 3300050490 Bacteria 619
189 nmdc:mga00v17_121328_c1 3300050491 Bacteria 1664
190 nmdc:mga05p37_18077_c1 3300050507 Bacteria 8516
191 nmdc:mga05p37_352293_c1 3300050507 Bacteria 1733
192 nmdc:mga09592_31720_c1 3300050508 Bacteria 4403
193 nmdc:mga09592_54850_c1 3300050508 Bacteria 3367
194 nmdc:mga0qj67_324769_c1 3300050509 Bacteria 1246
195 nmdc:mga0qj67_95492_c1 3300050509 Bacteria 2393
196 nmdc:mga06r32_109446_c1 3300050510 Bacteria 2717
197 nmdc:mga06r32_180515_c1 3300050510 Bacteria 2096
198 nmdc:mga06r32_22565_c1 3300050510 Bacteria 5820
199 nmdc:mga06r32_278632_c1 3300050510 Bacteria 1659
200 nmdc:mga06r32_701615_c1 3300050510 Bacteria 978
201 nmdc:mga08y16_1062751_c1 3300050511 Bacteria 786
202 nmdc:mga0rr50_809381_c1 3300050513 Bacteria 799
203 Ga0495619_0133725 3300053085 Bacteria 1705
204 Ga0500616_0000794 3300053153 Bacteria 36195
205 Ga0530510_0115204 3300061734 Bacteria 1970
206 2643850502 2643221567 Bacteria 4163945
207 2644134259 2643221624 Bacteria 4384879
208 2919449911 2919446982 Bacteria 3994487
209 3001891938 3001889506 Bacteria 2975194
210 Ga0075364_10193920
211 JGI25407J50210_10000115
212 JGI25407J50210_10019522
213 JGI25407J50210_10103953
214 Ga0070658_10095639
215 Ga0070683_100007296
216 Ga0070683_100082140
217 Ga0070680_100019299
218 Ga0070680_100210120
219 Ga0070682_100041971
220 Ga0070682_100138582
221 Ga0070660_100020881
222 Ga0070661_100029252
223 Ga0070692_10136091
224 Ga0070692_10181732
225 Ga0070659_100000077
226 Ga0070659_100001945
227 Ga0070714_100006161
228 Ga0070710_10000008
229 Ga0070711_100209456
230 Ga0070708_100279732
231 Ga0070681_10058245
232 Ga0070681_10691301
233 Ga0070706_100021891
234 Ga0070698_100015166
235 Ga0070679_100027996
236 Ga0070679_100108726
237 Ga0070679_100168937
238 Ga0070679_100367949
239 Ga0070679_100656136
240 Ga0070679_100929023
241 Ga0070684_100021940
242 Ga0070684_100025481
243 Ga0070697_100059103
244 Ga0070697_100955875
245 Ga0070697_102066164
246 Ga0068857_100142948
247 Ga0068854_101183532
248 Ga0068856_100206341
249 Ga0068852_100016919
250 Ga0081455_10019369
251 Ga0081455_10069281
252 Ga0081538_10000143
253 Ga0081538_10000621
254 Ga0081538_10001061
255 Ga0081538_10001370
256 Ga0081538_10002815
257 Ga0081538_10008799
258 Ga0081538_10009947
259 Ga0081538_10011511
260 Ga0081538_10018918
261 Ga0081538_10031085
262 Ga0081538_10067232
263 Ga0081538_10224520
264 Ga0070717_10000004
265 Ga0075365_10195063
266 Ga0075365_10290883
267 Ga0075363_100063715
268 Ga0075363_100333370
269 Ga0075363_100552177
270 Ga0070712_100712960
271 Ga0075367_10058797
272 Ga0075367_10139886
273 Ga0075428_100046703
274 Ga0075428_100299841
275 Ga0075430_100012950
276 Ga0075430_100039382
277 Ga0075430_100189137
278 Ga0075430_100957885
279 Ga0075431_100006364
280 Ga0075431_100299923
281 Ga0075431_101063659
282 Ga0075429_100012966
283 Ga0075429_100043408
284 Ga0105240_10086474
285 Ga0114129_10003484
286 Ga0114129_10235264
287 Ga0114129_10765259
288 Ga0105243_10809863
289 Ga0105237_10029758
290 Ga0105238_10007373
291 Ga0105239_10090098
292 Ga0105246_10335088
293 Ga0157370_10039495
294 Ga0157369_10005185
295 Ga0157372_10011653
296 Ga0157375_10437572
297 Ga0157375_10642699
298 Ga0157380_10787379
299 Ga0157376_10014343
300 Ga0206356_11140387
301 Ga0206354_10367037
302 Ga0206353_10273610
303 Ga0206353_11232889
304 Ga0206353_11302426
305 Ga0206353_11839352
306 Ga0213876_10199926
307 Ga0213876_10412147
308 Ga0207692_10000034
309 Ga0207705_10345986
310 Ga0207684_10210490
311 Ga0207707_10008325
312 Ga0207707_10461011
313 Ga0207695_10111115
314 Ga0207663_10108749
315 Ga0207660_10021887
316 Ga0207660_10394105
317 Ga0207657_10041306
318 Ga0207657_10172330
319 Ga0207649_10023642
320 Ga0207652_10042785
321 Ga0207652_10318583
322 Ga0207652_10777469
323 Ga0207652_11264461
324 Ga0207646_10051343
325 Ga0207694_10208555
326 Ga0207690_10039975
327 Ga0207661_10001164
328 Ga0207661_10024210
329 Ga0207661_10392409
330 Ga0207640_10024504
331 Ga0207702_10141064
332 Ga0207698_10037868
333 Ga0316575_10052417
334 Ga0307406_10883906
335 Ga0307412_10822659
336 Ga0307416_100175593
337 Ga0307416_100588719
338 Ga0307411_11948590
339 Ga0307415_100499864
340 Ga0395900_0084697
341 Ga0395898_0282167
342 Ga0395898_0426262
343 Ga0395901_0014780
344 Ga0395901_0031880
345 Ga0395901_0055991
346 Ga0395901_0301125
347 Ga0436365_0941304
348 Ga0436363_0021843
349 Ga0451791_0561277
350 Ga0451797_1260700
351 Ga0451833_0287494
352 Ga0451843_0430342
353 Ga0451853_1151180
354 Ga0439463_012721
355 Ga0466965_0326913
356 Ga0466968_0152202
357 Ga0466960_0018281
358 Ga0466960_0968144
359 Ga0466967_0059222
360 Ga0466967_0433160
361 Ga0466967_1125743
362 Ga0495650_0032180
363 Ga0495580_0144493
364 Ga0495630_0290775
365 Ga0495661_0359037
366 Ga0495657_0193038
367 Ga0495670_0210206
368 Ga0495589_0201362
369 Ga0496100_0048250
370 Ga0496101_0022272
371 Ga0496102_0120650
372 Ga0496102_0126248
373 Ga0496102_0213970
374 Ga0496103_0010687
375 Ga0496103_0697803
376 Ga0496112_0991109
377 Ga0496114_0054547
378 Ga0496126_0002996
379 Ga0501034_0017382
380 Ga0501038_0482281
381 Ga0501039_0162454
382 Ga0501040_0155244
383 Ga0501041_0445070
384 Ga0501042_0212514
385 Ga0501046_0330510
386 Ga0501048_0660386
387 Ga0501048_1098313
388 Ga0501070_0311795
389 Ga0501072_0084093
390 Ga0501075_0031583
391 Ga0501075_0259965
392 Ga0501079_0027162
393 Ga0501081_0256020
394 Ga0501083_0091027
395 Ga0501035_0608325
396 nmdc:mga03n38_208600_c1
397 nmdc:mga03n38_616633_c1
398 nmdc:mga00v17_121328_c1
399 nmdc:mga05p37_18077_c1
400 nmdc:mga05p37_352293_c1
401 nmdc:mga09592_31720_c1
402 nmdc:mga09592_54850_c1
403 nmdc:mga0qj67_324769_c1
404 nmdc:mga0qj67_95492_c1
405 nmdc:mga06r32_109446_c1
406 nmdc:mga06r32_180515_c1
407 nmdc:mga06r32_22565_c1
408 nmdc:mga06r32_278632_c1
409 nmdc:mga06r32_701615_c1
410 nmdc:mga08y16_1062751_c1
411 nmdc:mga0rr50_809381_c1
412 Ga0495619_0133725
413 Ga0500616_0000794
414 Ga0530510_0115204
415 2643850502
416 2644134259
417 2919449911
418 3001891938

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02566

OsmC

OsmC-like protein

67

173

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2d7v-assembly1.cif.gz_B structure of osmc-like protein of unknown function vca0330 from vibrio cholerae o1 biovar eltor str. n16961 0.9059 3 147
2onf-assembly1.cif.gz_B crystal structure of a putative osmotically inducible protein c (ta0195) from thermoplasma acidophilum at 1.70 a resolution 0.8667 2 151
2onf-assembly1.cif.gz_B crystal structure of a putative osmotically inducible protein c (ta0195) from thermoplasma acidophilum at 1.70 a resolution 0.8611 2 151
2d7v-assembly1.cif.gz_B structure of osmc-like protein of unknown function vca0330 from vibrio cholerae o1 biovar eltor str. n16961 0.855 3 147
1nye-assembly3.cif.gz_F crystal structure of osmc from e. coli 0.8441 2 149
ID Description Score Start End Superfamily
2d7vB00 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.8896 4 147 3.30.300.20
2onfB01 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.8547 9 151 3.30.300.20
2d7vB00 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.845 4 147 3.30.300.20
1nyeE00 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.843 2 149 3.30.300.20
2onfB01 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.8429 9 151 3.30.300.20
ID Description Score Start End GO Terms
AF-A0A7W0H6P0-F1-model_v4 OsmC family protein 0.9957 1 151
AF-A0A7V8YRN2-F1-model_v4 OsmC family protein 0.9947 47 151
AF-A0A0T2IDB7-F1-model_v4 Osmotically inducible protein OsmC 0.9891 1 151
AF-A0A7W0M2S2-F1-model_v4 OsmC family protein 0.9877 2 151
AF-A0A2T6L0Y9-F1-model_v4 Organic hydroperoxide reductase OsmC/OhrA 0.9844 1 151

Map