F318486

General Info

Members Datasets Scaffolds Average Seq Length
208 160 416 434

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2784746763|2785340532
Length 484
Sequence RQLGTGIGWRPEIADAVERMAGSAGGVDWVEVVAENVCPGHIPESLLRLRERGVTVVPHGVSLGLGGADRPDEERLRNLAERAQALGAPLVTEHIAFVRAGGALTASPLLEAGHLLPVPRTRDALDVLCENVRIAQDALPVPLALENIAALINWPGEEMTEGQFLYDLVDRTGVRLLIDVANLHTNHVNRGEDPAKALDELPVEAIAYVHVAGGFERDGVWHDSHAHPVPPQVLDVLAELASRVSPPGVLLERDENFPEPAELERELDAIRGVLKTAGDQGGAPASDEPATTPTTTPATAPATSAESSAGSGAAATPATSAQSAAGSAPAAEPVTSAEEVPGGESEPVARQRTGLAQAALLSALVAGTPAPEGFDRVRLAVQSRALAAKRADVVGKVAPELPVILGTSYRPAFVAYAQGHPMTDGYRRDALSFAEHLLLGDRVEDAGTRRALRAWWLERSGPAPLSRRPTARLARATRRVLLRR

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
4 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
5 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
6 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
7 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
8 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
9 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
10 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
11 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
12 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
13 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
14 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
15 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
16 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
17 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
18 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
19 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
20 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
21 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
22 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
23 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
24 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
25 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
26 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
27 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
28 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
29 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
30 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
31 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
32 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
33 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
34 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
35 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
36 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
37 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
38 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
39 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
40 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
41 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
42 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
43 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
44 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
45 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
46 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
47 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
48 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
49 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
50 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
51 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
52 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
53 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
54 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
55 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
56 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
57 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
58 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
59 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
60 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
61 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
62 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
63 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
64 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
65 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
66 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
67 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
68 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
69 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
70 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
71 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
72 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
73 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
74 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
75 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
76 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
77 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
78 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
79 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
80 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
81 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
82 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
83 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
84 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
94 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
96 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
97 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
98 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
99 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
100 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
101 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
102 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
103 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
104 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
105 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
106 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
107 2643221548 Streptomyces sp. Root55 Isolate Unclassified
108 2643221578 Streptomyces sp. Root63 Isolate Unclassified
109 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
110 2643221647 Streptomyces sp. Root369 Isolate Unclassified
111 2643221670 Streptomyces sp. Root431 Isolate Unclassified
112 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
113 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
114 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
115 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
116 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
117 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
118 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
119 2808606448 Streptomyces sp. 193411 Isolate Unclassified
120 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
121 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
122 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
123 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
124 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
125 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
126 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
127 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
128 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
129 2862574272 Streptomyces sp. AcE210 Isolate Nodule
130 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
131 2867428634 Streptomyces sp. RP5T Isolate Unclassified
132 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
133 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
134 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
135 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
136 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
137 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
138 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
139 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
140 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
141 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
142 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
143 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
144 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
145 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
146 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
147 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
148 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
149 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
150 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
151 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
152 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
153 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
154 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
155 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
156 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
157 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
158 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
159 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
160 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 69.71
Metatranscriptomes 0.96
Isolates 29.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.92
Nodule 1.92
Rhizoplane 0
Rhizosphere 76.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10009086 3300003323 Bacteria 5648
2 rootH1_10080159 3300003323 Bacteria 3489
3 Ga0006562J51391_1095188 3300003578 Bacteria 4080
4 Ga0006562J51391_1095190 3300003578 Bacteria 3550
5 Ga0068853_100146680 3300005539 Bacteria 2121
6 Ga0070672_100142791 3300005543 Bacteria 1976
7 Ga0068856_100078480 3300005614 Bacteria 3273
8 Ga0075370_10030789 3300006353 Bacteria 2995
9 Ga0099826_10101945 3300006948 Bacteria 1729
10 Ga0157369_10168305 3300013105 Bacteria 2310
11 Ga0183367_1001 3300015688 Bacteria 1225545
12 Ga0207647_10039775 3300025904 Bacteria 2964
13 Ga0307517_10003088 3300028786 Bacteria 26275
14 Ga0307515_10000279 3300028794 Bacteria 125422
15 Ga0307515_10114916 3300028794 Bacteria 3106
16 Ga0307511_10003004 3300030521 Bacteria 17457
17 Ga0307512_10087721 3300030522 Bacteria 2189
18 Ga0307509_10015029 3300031507 Bacteria 9065
19 Ga0307508_10005964 3300031616 Bacteria 11494
20 Ga0307514_10014438 3300031649 Bacteria 6538
21 Ga0307514_10048119 3300031649 Bacteria 3324
22 Ga0307518_10009362 3300031838 Bacteria 6986
23 Ga0307518_10104663 3300031838 Bacteria 2022
24 Ga0307416_100246428 3300032002 Bacteria 1736
25 Ga0307507_10009791 3300033179 Bacteria 12644
26 Ga0307507_10012468 3300033179 Bacteria 10501
27 Ga0307510_10048955 3300033180 Bacteria 4501
28 Ga0395900_0054868 3300037418 Bacteria 4103
29 Ga0395898_0018538 3300037466 Bacteria 7094
30 Ga0395898_0105562 3300037466 Bacteria 2701
31 Ga0395905_0266987 3300037471 Bacteria 1597
32 Ga0395901_0313204 3300038443 Bacteria 1625
33 Ga0439436_0003985 3300041404 Bacteria 4527
34 Ga0439439_0002659 3300041406 Bacteria 3827
35 Ga0439449_0000019 3300042007 Bacteria 46468
36 Ga0439449_0006667 3300042007 Bacteria 4413
37 Ga0439457_001607 3300042014 Bacteria 6739
38 Ga0439457_005904 3300042014 Bacteria 3034
39 Ga0450896_000708 3300042133 Bacteria 3709
40 Ga0450898_000352 3300042134 Bacteria 5259
41 Ga0450903_002893 3300042138 Bacteria 2999
42 Ga0450906_001487 3300042145 Bacteria 5113
43 Ga0466961_0006135 3300044693 Bacteria 7626
44 Ga0466963_0000594 3300044694 Bacteria 17256
45 Ga0466963_0010877 3300044694 Bacteria 5524
46 Ga0466970_0001581 3300044765 Bacteria 10999
47 Ga0466970_0024948 3300044765 Bacteria 3128
48 Ga0466957_0000224 3300044842 Bacteria 26690
49 Ga0466960_0006307 3300044901 Bacteria 4752
50 Ga0466967_0000194 3300045976 Bacteria 25425
51 Ga0466967_0171770 3300045976 Bacteria 2040
52 Ga0495592_0057260 3300046454 Bacteria 2877
53 Ga0495603_0000999 3300046455 Bacteria 16318
54 Ga0495603_0001149 3300046455 Bacteria 15459
55 Ga0495603_0010106 3300046455 Bacteria 5712
56 Ga0495603_0011016 3300046455 Bacteria 5483
57 Ga0495603_0030342 3300046455 Bacteria 3256
58 Ga0495629_0003422 3300046459 Bacteria 12006
59 Ga0495629_0003732 3300046459 Bacteria 11479
60 Ga0495629_0005961 3300046459 Bacteria 9070
61 Ga0495629_0009525 3300046459 Bacteria 7097
62 Ga0495629_0034391 3300046459 Bacteria 3583
63 Ga0495638_0048590 3300046460 Bacteria 2655
64 Ga0495651_0010045 3300046462 Bacteria 7276
65 Ga0495639_0010209 3300046475 Bacteria 4041
66 Ga0495662_0003479 3300046476 Bacteria 7975
67 Ga0495662_0005737 3300046476 Bacteria 6209
68 Ga0495662_0008537 3300046476 Bacteria 5034
69 Ga0495664_0001104 3300046477 Bacteria 13966
70 Ga0495585_0104780 3300046492 Bacteria 1509
71 Ga0495594_0004097 3300046499 Bacteria 7496
72 Ga0495594_0085881 3300046499 Bacteria 1760
73 Ga0495594_0107821 3300046499 Bacteria 1569
74 Ga0495606_0006652 3300046507 Bacteria 10598
75 Ga0495616_0018633 3300046513 Bacteria 3805
76 Ga0495628_0152188 3300046516 Bacteria 1761
77 Ga0495630_0059001 3300046517 Bacteria 2878
78 Ga0495654_0063680 3300046530 Bacteria 1765
79 Ga0495640_0008249 3300046533 Bacteria 8175
80 Ga0495587_0016604 3300046536 Bacteria 4579
81 Ga0495597_0010992 3300046542 Bacteria 4401
82 Ga0495622_0022125 3300046557 Bacteria 2962
83 Ga0495622_0028632 3300046557 Bacteria 2601
84 Ga0495633_0018456 3300046558 Bacteria 3542
85 Ga0495667_0097257 3300046559 Bacteria 1906
86 Ga0495634_0011457 3300046642 Bacteria 6451
87 Ga0495634_0015860 3300046642 Bacteria 5398
88 Ga0495611_0018272 3300046648 Bacteria 3005
89 Ga0495625_0020156 3300046660 Bacteria 5152
90 Ga0495635_0001134 3300046663 Bacteria 17766
91 Ga0495635_0126426 3300046663 Bacteria 1743
92 Ga0495588_0001232 3300046674 Bacteria 11021
93 Ga0495588_0010103 3300046674 Bacteria 4379
94 Ga0495588_0060254 3300046674 Bacteria 1964
95 Ga0495657_0000512 3300046675 Bacteria 36227
96 Ga0495657_0006550 3300046675 Bacteria 9101
97 Ga0495646_0001690 3300046680 Bacteria 13217
98 Ga0495613_0009840 3300046689 Bacteria 7111
99 Ga0495613_0014679 3300046689 Bacteria 5812
100 Ga0495613_0066304 3300046689 Bacteria 2636
101 Ga0495613_0132617 3300046689 Bacteria 1783
102 Ga0495671_0018460 3300046692 Bacteria 3701
103 Ga0495649_0075703 3300046694 Bacteria 1802
104 Ga0495589_0003612 3300046794 Bacteria 8356
105 Ga0495589_0020590 3300046794 Bacteria 3373
106 Ga0495600_0133191 3300046809 Bacteria 1615
107 Ga0495604_0002006 3300047317 Bacteria 16414
108 Ga0495676_0008129 3300047321 Bacteria 9624
109 Ga0495676_0026353 3300047321 Bacteria 5005
110 Ga0495676_0031173 3300047321 Bacteria 4512
111 Ga0495676_0034656 3300047321 Bacteria 4232
112 Ga0495680_0007232 3300047322 Bacteria 10223
113 Ga0495687_000755 3300047443 Bacteria 34995
114 Ga0495687_002726 3300047443 Bacteria 13705
115 Ga0495675_0023405 3300047444 Bacteria 3935
116 Ga0495677_0018950 3300047445 Bacteria 2496
117 Ga0495685_009020 3300047447 Bacteria 3324
118 Ga0495685_010393 3300047447 Bacteria 3120
119 Ga0495681_0000720 3300047470 Bacteria 25364
120 Ga0495593_0006545 3300047673 Bacteria 6820
121 Ga0495602_0055641 3300048088 Bacteria 3484
122 Ga0495602_0096232 3300048088 Bacteria 2442
123 Ga0495614_0021312 3300048089 Bacteria 2798
124 Ga0495614_0023145 3300048089 Bacteria 2679
125 Ga0501033_0010884 3300049570 Bacteria 6974
126 Ga0501033_0030117 3300049570 Bacteria 4077
127 Ga0501034_0011203 3300049571 Bacteria 9310
128 Ga0501036_0023394 3300049572 Bacteria 5205
129 Ga0501036_0031138 3300049572 Bacteria 4507
130 Ga0501037_0044426 3300049573 Bacteria 3263
131 Ga0501038_0009330 3300049574 Bacteria 8999
132 Ga0501039_0007880 3300049575 Bacteria 8120
133 Ga0501043_0012090 3300049579 Bacteria 6751
134 Ga0501047_0059105 3300049581 Bacteria 3702
135 Ga0501070_0001961 3300049586 Bacteria 18157
136 Ga0501070_0182258 3300049586 Bacteria 1728
137 Ga0501074_0002509 3300049590 Bacteria 12793
138 Ga0501035_0012968 3300049822 Bacteria 7692
139 Ga0501035_0030552 3300049822 Bacteria 4910
140 Ga0501044_0004151 3300049823 Bacteria 16268
141 Ga0501044_0006307 3300049823 Bacteria 13111
142 Ga0501044_0021524 3300049823 Bacteria 6877
143 Ga0500560_000228 3300053107 Bacteria 6865
144 Ga0500572_016869 3300053111 Bacteria 1868
145 Ga0500624_006084 3300053157 Bacteria 1624
146 Ga0466962_0000221 3300061719 Bacteria 23682
147 Ga0466962_0019196 3300061719 Bacteria 3283
148 2785340532 2784746763 Bacteria 9783172
149 2547407479 2547132111 Bacteria 8013147
150 2554260455 2554235005 Bacteria 6457341
151 2585297028 2582581312 Bacteria 7308206
152 2585307331 2582581313 Bacteria 10042643
153 2616699139 2616644814 Bacteria 11555299
154 2616902417 2616644941 Bacteria 8510691
155 2643761794 2643221548 Bacteria 8053412
156 2643904140 2643221578 Bacteria 9213798
157 2643943349 2643221587 Bacteria 7586415
158 2644264869 2643221647 Bacteria 10741251
159 2644388326 2643221670 Bacteria 6497041
160 2644402495 2643221673 Bacteria 9196637
161 2644430817 2643221677 Bacteria 7584031
162 2644442505 2643221678 Bacteria 9540101
163 2644460779 2643221682 Bacteria 6743283
164 2786673306 2786546132 Bacteria 10419719
165 2808844680 2808606359 Bacteria 9866990
166 2808914246 2808606375 Bacteria 9466072
167 2809234771 2808606448 Bacteria 8656184
168 2811843832 2808606982 Bacteria 7791042
169 2812477987 2811994917 Bacteria 7761064
170 2819699572 2818991463 Bacteria 7948711
171 2852638757 2852635781 Bacteria 8251373
172 2862180224 2862178590 Bacteria 8583590
173 2862283986 2862281513 Bacteria 9621493
174 2862293426 2862290372 Bacteria 7471434
175 2862384656 2862382967 Bacteria 10317375
176 2862516568 2862507626 Bacteria 9425308
177 2862576830 2862574272 Bacteria 10567477
178 2863409322 2863404153 Bacteria 9672205
179 2867436711 2867428634 Bacteria 9590268
180 2873153414 2873151551 Bacteria 8625867
181 2875397368 2875391855 Bacteria 7600475
182 2877678415 2877676314 Bacteria 9512378
183 2912716916 2912715099 Bacteria 9460473
184 2912729487 2912723979 Bacteria 8557534
185 2912763606 2912757875 Bacteria 7940295
186 2918507197 2918501144 Bacteria 8668083
187 2919474945 2919468124 Bacteria 9133025
188 2946047136 2946045630 Bacteria 8527308
189 2954010346 2954002825 Bacteria 9173742
190 2954383362 2954380949 Bacteria 10050426
191 2954679609 2954673503 Bacteria 9685905
192 2954684546 2954682443 Bacteria 9862841
193 2954694073 2954691527 Bacteria 10720516
194 2954709179 2954701450 Bacteria 10834262
195 2954713679 2954711539 Bacteria 10867210
196 2954723643 2954721474 Bacteria 10456478
197 2954738190 2954731030 Bacteria 10243860
198 2954742545 2954740390 Bacteria 10229294
199 2954757050 2954749733 Bacteria 10366972
200 2954761510 2954759201 Bacteria 9358192
201 2966600150 2966598605 Bacteria 7676064
202 2990067159 2990059506 Bacteria 9321252
203 3006399098 3006393351 Bacteria 6615579
204 3006499626 3006493962 Bacteria 8825450
205 8008563601 8008558824 Bacteria 10610750
206 8008576514 8008574985 Bacteria 7815457
207 8048411174 8048406513 Bacteria 8936924
208 8056829889 8056829672 Bacteria 9045328
209 rootH1_10009086
210 rootH1_10080159
211 Ga0006562J51391_1095188
212 Ga0006562J51391_1095190
213 Ga0068853_100146680
214 Ga0070672_100142791
215 Ga0068856_100078480
216 Ga0075370_10030789
217 Ga0099826_10101945
218 Ga0157369_10168305
219 Ga0183367_1001
220 Ga0207647_10039775
221 Ga0307517_10003088
222 Ga0307515_10000279
223 Ga0307515_10114916
224 Ga0307511_10003004
225 Ga0307512_10087721
226 Ga0307509_10015029
227 Ga0307508_10005964
228 Ga0307514_10014438
229 Ga0307514_10048119
230 Ga0307518_10009362
231 Ga0307518_10104663
232 Ga0307416_100246428
233 Ga0307507_10009791
234 Ga0307507_10012468
235 Ga0307510_10048955
236 Ga0395900_0054868
237 Ga0395898_0018538
238 Ga0395898_0105562
239 Ga0395905_0266987
240 Ga0395901_0313204
241 Ga0439436_0003985
242 Ga0439439_0002659
243 Ga0439449_0000019
244 Ga0439449_0006667
245 Ga0439457_001607
246 Ga0439457_005904
247 Ga0450896_000708
248 Ga0450898_000352
249 Ga0450903_002893
250 Ga0450906_001487
251 Ga0466961_0006135
252 Ga0466963_0000594
253 Ga0466963_0010877
254 Ga0466970_0001581
255 Ga0466970_0024948
256 Ga0466957_0000224
257 Ga0466960_0006307
258 Ga0466967_0000194
259 Ga0466967_0171770
260 Ga0495592_0057260
261 Ga0495603_0000999
262 Ga0495603_0001149
263 Ga0495603_0010106
264 Ga0495603_0011016
265 Ga0495603_0030342
266 Ga0495629_0003422
267 Ga0495629_0003732
268 Ga0495629_0005961
269 Ga0495629_0009525
270 Ga0495629_0034391
271 Ga0495638_0048590
272 Ga0495651_0010045
273 Ga0495639_0010209
274 Ga0495662_0003479
275 Ga0495662_0005737
276 Ga0495662_0008537
277 Ga0495664_0001104
278 Ga0495585_0104780
279 Ga0495594_0004097
280 Ga0495594_0085881
281 Ga0495594_0107821
282 Ga0495606_0006652
283 Ga0495616_0018633
284 Ga0495628_0152188
285 Ga0495630_0059001
286 Ga0495654_0063680
287 Ga0495640_0008249
288 Ga0495587_0016604
289 Ga0495597_0010992
290 Ga0495622_0022125
291 Ga0495622_0028632
292 Ga0495633_0018456
293 Ga0495667_0097257
294 Ga0495634_0011457
295 Ga0495634_0015860
296 Ga0495611_0018272
297 Ga0495625_0020156
298 Ga0495635_0001134
299 Ga0495635_0126426
300 Ga0495588_0001232
301 Ga0495588_0010103
302 Ga0495588_0060254
303 Ga0495657_0000512
304 Ga0495657_0006550
305 Ga0495646_0001690
306 Ga0495613_0009840
307 Ga0495613_0014679
308 Ga0495613_0066304
309 Ga0495613_0132617
310 Ga0495671_0018460
311 Ga0495649_0075703
312 Ga0495589_0003612
313 Ga0495589_0020590
314 Ga0495600_0133191
315 Ga0495604_0002006
316 Ga0495676_0008129
317 Ga0495676_0026353
318 Ga0495676_0031173
319 Ga0495676_0034656
320 Ga0495680_0007232
321 Ga0495687_000755
322 Ga0495687_002726
323 Ga0495675_0023405
324 Ga0495677_0018950
325 Ga0495685_009020
326 Ga0495685_010393
327 Ga0495681_0000720
328 Ga0495593_0006545
329 Ga0495602_0055641
330 Ga0495602_0096232
331 Ga0495614_0021312
332 Ga0495614_0023145
333 Ga0501033_0010884
334 Ga0501033_0030117
335 Ga0501034_0011203
336 Ga0501036_0023394
337 Ga0501036_0031138
338 Ga0501037_0044426
339 Ga0501038_0009330
340 Ga0501039_0007880
341 Ga0501043_0012090
342 Ga0501047_0059105
343 Ga0501070_0001961
344 Ga0501070_0182258
345 Ga0501074_0002509
346 Ga0501035_0012968
347 Ga0501035_0030552
348 Ga0501044_0004151
349 Ga0501044_0006307
350 Ga0501044_0021524
351 Ga0500560_000228
352 Ga0500572_016869
353 Ga0500624_006084
354 Ga0466962_0000221
355 Ga0466962_0019196
356 2785340532
357 2547407479
358 2554260455
359 2585297028
360 2585307331
361 2616699139
362 2616902417
363 2643761794
364 2643904140
365 2643943349
366 2644264869
367 2644388326
368 2644402495
369 2644430817
370 2644442505
371 2644460779
372 2786673306
373 2808844680
374 2808914246
375 2809234771
376 2811843832
377 2812477987
378 2819699572
379 2852638757
380 2862180224
381 2862283986
382 2862293426
383 2862384656
384 2862516568
385 2862576830
386 2863409322
387 2867436711
388 2873153414
389 2875397368
390 2877678415
391 2912716916
392 2912729487
393 2912763606
394 2918507197
395 2919474945
396 2946047136
397 2954010346
398 2954383362
399 2954679609
400 2954684546
401 2954694073
402 2954709179
403 2954713679
404 2954723643
405 2954738190
406 2954742545
407 2954757050
408 2954761510
409 2966600150
410 2990067159
411 3006399098
412 3006499626
413 8008563601
414 8008576514
415 8048411174
416 8056829889

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05114

DUF692

Protein of unknown function (DUF692)

4

275

0.94

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

21

272

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bww-assembly1.cif.gz_A crystal structure of a duf692 family protein (hs_1138) from haemophilus somnus 129pt at 2.20 a resolution 0.8619 23 298
3bww-assembly1.cif.gz_A crystal structure of a duf692 family protein (hs_1138) from haemophilus somnus 129pt at 2.20 a resolution 0.8304 23 298
7dz9-assembly1.cif.gz_A mbnabc complex 0.829 24 290
7dz9-assembly2.cif.gz_B mbnabc complex 0.8274 24 290
7dz9-assembly1.cif.gz_A mbnabc complex 0.8203 24 290
ID Description Score Start End Superfamily
3bwwA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8529 23 298 3.20.20.150
3bwwA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8239 23 298 3.20.20.150
1yx1C00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.6622 24 286 3.20.20.150
1yx1C00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.6448 24 286 3.20.20.150
af_Q59009_1_251_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.6323 26 290 3.20.20.150
ID Description Score Start End GO Terms
AF-A0A7K2MIT8-F1-model_v4 DUF692 family protein 0.9781 23 107
AF-A0A239MJX3-F1-model_v4 Uncharacterized protein 0.9755 22 292
AF-A0A7W8A788-F1-model_v4 DUF692 domain-containing protein 0.9742 23 297
AF-A0A7W0CR53-F1-model_v4 DUF692 domain-containing protein 0.9732 22 293
AF-A0A1C4RJL2-F1-model_v4 Uncharacterized protein 0.9694 22 266

Map