F317478

General Info

Members Datasets Scaffolds Average Seq Length
208 123 208 375

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100313755|Ga0070708_1003137551
Length 408
Sequence MPWAETEPVNERLRFWQDFQRGIFRFNELCEVYDISRNTGYKLVRRVLREGLASAAHDRSRAPRSCPHRTDEALADALVEIRRVHRTWGPKKIIAYLERHAPGYAWPAPSTVGEILKRRGMIQPRRRKPRPGHPGRGETVPVEPNAVWTADFKGHFRTRDSLYCYPLTIVDGFSRYLLACQALPSTEHAGAQPVFERLFRDFGLPKVIRTDNGIPFATQAVRRLSQLSVWWIKLGITPELNEPSHPEQNGSHERMHRTLKDEATKPPAVNWRAQQRPFDRFVFEYNEERPHEAIGQRTPHSLYRSSPRPYPKRIPTVEYPGHFEVRRVSRNGGIRWKHSIAVGPNNGWLNVSHVLAEENVGLEEVDDGIWSVYFGPVLLGRFDERELRLYGDISKLRTQPKVSPMLPV

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
59 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
60 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
61 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
62 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
68 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
69 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
70 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
71 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
72 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
73 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
74 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
75 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
76 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
77 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
80 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
81 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
82 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
83 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
84 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
85 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
86 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
87 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
88 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
89 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
92 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
93 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
94 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
95 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
96 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
97 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
98 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
101 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
102 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
103 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
109 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
110 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
111 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
112 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
113 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
114 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
115 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
116 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
117 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
118 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
119 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
120 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
123 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.4
Rhizosphere 94.23
Stem 0
Stem Tuber 0
Unclassified 3.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10212059 3300003320 Bacteria 1337
2 rootL2_10302433 3300003322 Bacteria 2366
3 Ga0065712_10107169 3300005290 Unclassified 1901
4 Ga0070676_10115254 3300005328 Bacteria 1679
5 Ga0070670_100270911 3300005331 Bacteria 1481
6 Ga0070668_100139761 3300005347 Bacteria 1951
7 Ga0070669_100133212 3300005353 Bacteria 1909
8 Ga0070669_100277755 3300005353 Bacteria 1341
9 Ga0070675_100242545 3300005354 Unclassified 1575
10 Ga0070671_100070558 3300005355 Bacteria 2915
11 Ga0070673_100181743 3300005364 Bacteria 1801
12 Ga0070694_100199211 3300005444 Bacteria 1491
13 Ga0070708_100073435 3300005445 Bacteria 3083
14 Ga0070708_100085461 3300005445 Bacteria 2863
15 Ga0070708_100222124 3300005445 Bacteria 1772
16 Ga0070708_100313755 3300005445 Bacteria 1477
17 Ga0070678_100162590 3300005456 Bacteria 1810
18 Ga0068867_100265072 3300005459 Bacteria 1402
19 Ga0070706_100191507 3300005467 Bacteria 1911
20 Ga0070706_100334164 3300005467 Bacteria 1413
21 Ga0070707_100210306 3300005468 Bacteria 1896
22 Ga0070707_100293814 3300005468 Bacteria 1579
23 Ga0070699_100082402 3300005518 Bacteria 2804
24 Ga0070699_100191204 3300005518 Unclassified 1818
25 Ga0070697_100167132 3300005536 Bacteria 1860
26 Ga0070697_100213386 3300005536 Bacteria 1644
27 Ga0070697_100269968 3300005536 Unclassified 1458
28 Ga0070697_100338742 3300005536 Bacteria 1297
29 Ga0070672_100287679 3300005543 Bacteria 1391
30 Ga0070686_100224620 3300005544 Bacteria 1359
31 Ga0070702_100222364 3300005615 Bacteria 1263
32 Ga0068852_100306661 3300005616 Unclassified 1538
33 Ga0068863_100109244 3300005841 Bacteria 2632
34 Ga0068863_100218430 3300005841 Unclassified 1836
35 Ga0068860_100002044 3300005843 Bacteria 21256
36 Ga0068860_100376721 3300005843 Unclassified 1400
37 Ga0081455_10070133 3300005937 Bacteria 2911
38 Ga0081538_10050942 3300005981 Unclassified 2493
39 Ga0070717_10102489 3300006028 Unclassified 2432
40 Ga0097621_100211395 3300006237 Bacteria 1688
41 Ga0068871_100096857 3300006358 Unclassified 2466
42 Ga0068871_100243532 3300006358 Bacteria 1564
43 Ga0075428_100230437 3300006844 Bacteria 1999
44 Ga0075428_100385472 3300006844 Bacteria 1502
45 Ga0075430_100105442 3300006846 Unclassified 2352
46 Ga0075430_100301667 3300006846 Bacteria 1325
47 Ga0075431_100383671 3300006847 Bacteria 1409
48 Ga0075431_100443036 3300006847 Bacteria 1295
49 Ga0075433_10253001 3300006852 Bacteria 1563
50 Ga0075434_100150393 3300006871 Bacteria 2348
51 Ga0075434_100332187 3300006871 Bacteria 1541
52 Ga0075434_100356890 3300006871 Bacteria 1483
53 Ga0075434_100365164 3300006871 Bacteria 1464
54 Ga0075434_100394040 3300006871 Bacteria 1406
55 Ga0075429_100117206 3300006880 Bacteria 2327
56 Ga0068865_100247918 3300006881 Bacteria 1404
57 Ga0075435_100142061 3300007076 Bacteria 2015
58 Ga0099794_10036525 3300007265 Bacteria 2323
59 Ga0099794_10071467 3300007265 Bacteria 1700
60 Ga0114129_10041982 3300009147 Bacteria 6440
61 Ga0114129_10203607 3300009147 Plasmid 2679
62 Ga0114129_10232079 3300009147 Bacteria 2485
63 Ga0114129_10371458 3300009147 Bacteria 1890
64 Ga0105248_10156752 3300009177 Bacteria 2569
65 Ga0105249_10072934 3300009553 Bacteria 3174
66 Ga0105249_10247575 3300009553 Bacteria 1765
67 Ga0163162_10283888 3300013306 Bacteria 1787
68 Ga0163162_10385593 3300013306 Bacteria 1534
69 Ga0163163_10158101 3300014325 Unclassified 2311
70 Ga0213876_10000141 3300021384 Bacteria 78529
71 Ga0213876_10010443 3300021384 Bacteria 4982
72 Ga0207684_10046416 3300025910 Unclassified 3685
73 Ga0207684_10231385 3300025910 Unclassified 1595
74 Ga0207646_10146285 3300025922 Unclassified 2129
75 Ga0207646_10327889 3300025922 Bacteria 1383
76 Ga0207706_10110700 3300025933 Bacteria 2416
77 Ga0207704_10092236 3300025938 Bacteria 1993
78 Ga0207711_10223830 3300025941 Bacteria 1722
79 Ga0207668_10186123 3300025972 Bacteria 1642
80 Ga0207708_10014028 3300026075 Bacteria 5985
81 Ga0207641_10150214 3300026088 Bacteria 2109
82 Ga0207675_100239602 3300026118 Bacteria 1752
83 Ga0207683_10062508 3300026121 Bacteria 3279
84 Ga0209588_1053421 3300027671 Bacteria 1307
85 Ga0268264_10001303 3300028381 Bacteria 23523
86 Ga0268264_10006635 3300028381 Bacteria 9731
87 Ga0307408_100176566 3300031548 Bacteria 1709
88 Ga0307408_100288533 3300031548 Bacteria 1369
89 Ga0307408_100311399 3300031548 Unclassified 1323
90 Ga0316576_10173102 3300031727 Bacteria 1629
91 Ga0307405_10179603 3300031731 Bacteria 1518
92 Ga0307405_10211028 3300031731 Bacteria 1417
93 Ga0307413_10009428 3300031824 Bacteria 4672
94 Ga0307413_10051438 3300031824 Bacteria 2482
95 Ga0307413_10148222 3300031824 Bacteria 1631
96 Ga0307413_10154465 3300031824 Bacteria 1603
97 Ga0307413_10234758 3300031824 Bacteria 1349
98 Ga0307410_10042881 3300031852 Bacteria 2993
99 Ga0307410_10048099 3300031852 Bacteria 2854
100 Ga0307410_10107468 3300031852 Bacteria 2012
101 Ga0307410_10152405 3300031852 Bacteria 1722
102 Ga0307406_10069869 3300031901 Bacteria 2297
103 Ga0307406_10076191 3300031901 Bacteria 2215
104 Ga0307406_10112472 3300031901 Bacteria 1877
105 Ga0307406_10162125 3300031901 Bacteria 1608
106 Ga0307407_10080081 3300031903 Bacteria 1972
107 Ga0307407_10088977 3300031903 Bacteria 1887
108 Ga0307407_10102627 3300031903 Bacteria 1778
109 Ga0307407_10140305 3300031903 Bacteria 1558
110 Ga0307407_10164636 3300031903 Bacteria 1454
111 Ga0307412_10008131 3300031911 Bacteria 5977
112 Ga0307409_100075135 3300031995 Bacteria 2704
113 Ga0307409_100149831 3300031995 Bacteria 2023
114 Ga0307409_100276446 3300031995 Bacteria 1549
115 Ga0307409_100334951 3300031995 Bacteria 1421
116 Ga0307416_100064486 3300032002 Bacteria 3005
117 Ga0307416_100218773 3300032002 Bacteria 1824
118 Ga0307416_100377993 3300032002 Bacteria 1445
119 Ga0307416_100434015 3300032002 Bacteria 1361
120 Ga0307414_10007466 3300032004 Bacteria 6140
121 Ga0307414_10026217 3300032004 Bacteria 3748
122 Ga0307414_10201987 3300032004 Bacteria 1617
123 Ga0307411_10097859 3300032005 Bacteria 2066
124 Ga0307411_10174076 3300032005 Bacteria 1626
125 Ga0307411_10207967 3300032005 Bacteria 1508
126 Ga0307411_10315425 3300032005 Bacteria 1260
127 Ga0307415_100100525 3300032126 Bacteria 2119
128 Ga0307415_100148332 3300032126 Bacteria 1801
129 Ga0307415_100181582 3300032126 Bacteria 1651
130 Ga0307415_100267657 3300032126 Bacteria 1398
131 Ga0307415_100278019 3300032126 Unclassified 1375
132 Ga0373944_0052918 3300035089 Bacteria 1284
133 Ga0373935_0113558 3300035692 Bacteria 1801
134 Ga0316582_0186732 3300036647 Bacteria 1411
135 Ga0400483_135845 3300039062 Bacteria 2098
136 Ga0400483_274677 3300039062 Bacteria 1701
137 Ga0436365_0289912 3300039437 Bacteria 336570
138 Ga0439460_0032573 3300042461 Bacteria 1493
139 Ga0451577_0096940 3300042876 Bacteria 2633
140 Ga0451577_0261375 3300042876 Bacteria 1567
141 Ga0453683_0170488 3300044673 Unclassified 1378
142 Ga0466957_0055332 3300044842 Unclassified 2425
143 Ga0451576_0234680 3300045051 Unclassified 1916
144 Ga0451576_0277787 3300045051 Bacteria 1751
145 Ga0451576_0279234 3300045051 Bacteria 1746
146 Ga0495603_0137395 3300046455 Bacteria 1422
147 Ga0495629_0133723 3300046459 Unclassified 1727
148 Ga0495582_0046845 3300046473 Unclassified 2381
149 Ga0495585_0084265 3300046492 Unclassified 1719
150 Ga0495607_0070222 3300046501 Bacteria 1958
151 Ga0495644_0038455 3300046523 Unclassified 1804
152 Ga0495644_0050820 3300046523 Bacteria 1556
153 Ga0495598_0046204 3300046537 Bacteria 1293
154 Ga0495621_0011069 3300046539 Unclassified 2780
155 Ga0495622_0039375 3300046557 Bacteria 2201
156 Ga0495633_0061174 3300046558 Unclassified 1763
157 Ga0495633_0090172 3300046558 Bacteria 1425
158 Ga0495668_0137337 3300046616 Bacteria 1338
159 Ga0495659_0001799 3300046664 Bacteria 7115
160 Ga0495659_0035270 3300046664 Bacteria 1762
161 Ga0495659_0070534 3300046664 Unclassified 1308
162 Ga0495661_0107256 3300046665 Unclassified 1562
163 Ga0495669_0068254 3300046684 Unclassified 1617
164 Ga0495670_0093074 3300046691 Unclassified 1544
165 Ga0495670_0101748 3300046691 Bacteria 1480
166 Ga0495671_0113739 3300046692 Bacteria 1322
167 Ga0495636_0059189 3300047318 Bacteria 1616
168 Ga0495636_0070252 3300047318 Unclassified 1493
169 Ga0495681_0088970 3300047470 Bacteria 1366
170 Ga0495684_0098766 3300047471 Unclassified 2207
171 Ga0496101_0221000 3300048904 Bacteria 1470
172 Ga0496106_0247953 3300048909 Bacteria 1423
173 Ga0496107_0223649 3300048910 Bacteria 1400
174 Ga0496114_0101282 3300048917 Bacteria 2459
175 Ga0496114_0190268 3300048917 Bacteria 1795
176 Ga0501032_0203386 3300049569 Unclassified 1292
177 Ga0501039_0260688 3300049575 Bacteria 1362
178 Ga0501041_0159642 3300049577 Bacteria 1409
179 Ga0501042_0074211 3300049578 Bacteria 2434
180 Ga0501046_0166676 3300049580 Bacteria 1655
181 Ga0501072_0192883 3300049588 Bacteria 1624
182 Ga0501076_0103559 3300049592 Bacteria 2296
183 Ga0501077_0078801 3300049593 Bacteria 2087
184 Ga0501081_0150033 3300049743 Bacteria 1674
185 Ga0501081_0249550 3300049743 Unclassified 1295
186 Ga0501268_012328 3300049765 Unclassified 1365
187 nmdc:mga05p37_11793_c1 3300050507 Bacteria 10417
188 nmdc:mga05p37_185234_c1 3300050507 Bacteria 2531
189 nmdc:mga05p37_234118_c1 3300050507 Bacteria 2212
190 nmdc:mga05p37_260474_c1 3300050507 Unclassified 2076
191 nmdc:mga05p37_27458_c1 3300050507 Bacteria 6929
192 nmdc:mga05p37_354387_c1 3300050507 Unclassified 1727
193 nmdc:mga09592_112979_c1 3300050508 Bacteria 2331
194 nmdc:mga0qj67_282043_c1 3300050509 Unclassified 1346
195 nmdc:mga0qj67_7856_c1 3300050509 Bacteria 7880
196 nmdc:mga06r32_390286_c1 3300050510 Bacteria 1375
197 nmdc:mga06r32_418258_c1 3300050510 Bacteria 1322
198 nmdc:mga0n895_294700_c1 3300050512 Unclassified 1645
199 nmdc:mga0n895_353127_c1 3300050512 Bacteria 1489
200 nmdc:mga0n895_79739_c1 3300050512 Bacteria 3261
201 nmdc:mga0rr50_208891_c1 3300050513 Unclassified 1608
202 nmdc:mga08x19_144978_c1 3300050514 Unclassified 1606
203 nmdc:mga0a205_137342_c1 3300050515 Bacteria 2345
204 nmdc:mga0a205_295311_c1 3300050515 Bacteria 1494
205 Ga0501084_0292245 3300054114 Bacteria 1376
206 Ga0501082_0083814 3300060353 Unclassified 2750
207 Ga0501082_0268920 3300060353 Bacteria 1483
208 Ga0530510_0034637 3300061734 Bacteria 3638

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300025933 Ga0207706_10110700 Ga0207706_101107002 263
2 3300005468 Ga0070707_100210306 Ga0070707_1002103062 266
3 3300025922 Ga0207646_10146285 Ga0207646_101462852 266
4 3300005536 Ga0070697_100338742 Ga0070697_1003387421 282
5 3300006852 Ga0075433_10253001 Ga0075433_102530012 289
6 3300050515 nmdc:mga0a205_295311_c1 nmdc:mga0a205_295311_c1_219_1367 289
7 3300006844 Ga0075428_100230437 Ga0075428_1002304372 291
8 3300006846 Ga0075430_100105442 Ga0075430_1001054422 291
9 3300006847 Ga0075431_100443036 Ga0075431_1004430361 291
10 3300006880 Ga0075429_100117206 Ga0075429_1001172062 291
11 3300049765 Ga0501268_012328 Ga0501268_012328_11_1075 291
12 3300050508 nmdc:mga09592_112979_c1 nmdc:mga09592_112979_c1_774_1922 291
13 3300050509 nmdc:mga0qj67_7856_c1 nmdc:mga0qj67_7856_c1_1188_2336 291
14 3300050510 nmdc:mga06r32_390286_c1 nmdc:mga06r32_390286_c1_140_1288 291
15 3300005444 Ga0070694_100199211 Ga0070694_1001992111 298
16 3300005518 Ga0070699_100191204 Ga0070699_1001912042 298
17 3300006028 Ga0070717_10102489 Ga0070717_101024892 298
18 3300025910 Ga0207684_10046416 Ga0207684_100464162 298
19 3300044673 Ga0453683_0170488 Ga0453683_0170488_79_1227 298
20 3300046664 Ga0495659_0001799 Ga0495659_0001799_1297_2370 298
21 3300049743 Ga0501081_0249550 Ga0501081_0249550_134_1282 298
22 3300007265 Ga0099794_10071467 Ga0099794_100714672 300
23 3300045051 Ga0451576_0277787 Ga0451576_0277787_268_1419 300
24 3300006871 Ga0075434_100394040 Ga0075434_1003940401 301
25 3300045051 Ga0451576_0234680 Ga0451576_0234680_453_1601 306
26 3300005445 Ga0070708_100073435 Ga0070708_1000734352 310
27 3300005456 Ga0070678_100162590 Ga0070678_1001625901 310
28 3300005468 Ga0070707_100293814 Ga0070707_1002938141 310
29 3300005544 Ga0070686_100224620 Ga0070686_1002246201 310
30 3300006237 Ga0097621_100211395 Ga0097621_1002113952 310
31 3300006358 Ga0068871_100096857 Ga0068871_1000968572 310
32 3300007265 Ga0099794_10036525 Ga0099794_100365252 310
33 3300025922 Ga0207646_10327889 Ga0207646_103278891 310
34 3300026121 Ga0207683_10062508 Ga0207683_100625082 310
35 3300027671 Ga0209588_1053421 Ga0209588_10534211 310
36 3300046459 Ga0495629_0133723 Ga0495629_0133723_383_1528 310
37 3300005536 Ga0070697_100167132 Ga0070697_1001671322 311
38 3300006871 Ga0075434_100365164 Ga0075434_1003651641 311
39 3300025910 Ga0207684_10231385 Ga0207684_102313852 311
40 3300031548 Ga0307408_100311399 Ga0307408_1003113992 311
41 3300031824 Ga0307413_10234758 Ga0307413_102347581 311
42 3300031903 Ga0307407_10164636 Ga0307407_101646362 311
43 3300032005 Ga0307411_10315425 Ga0307411_103154251 311
44 3300032126 Ga0307415_100267657 Ga0307415_1002676571 311
45 3300032126 Ga0307415_100278019 Ga0307415_1002780191 311
46 3300050507 nmdc:mga05p37_185234_c1 nmdc:mga05p37_185234_c1_324_1472 311
47 3300050512 nmdc:mga0n895_79739_c1 nmdc:mga0n895_79739_c1_1978_3126 311
48 3300005331 Ga0070670_100270911 Ga0070670_1002709111 312
49 3300005445 Ga0070708_100222124 Ga0070708_1002221241 312
50 3300009147 Ga0114129_10232079 Ga0114129_102320792 312
51 3300050507 nmdc:mga05p37_354387_c1 nmdc:mga05p37_354387_c1_404_1528 312
52 3300005347 Ga0070668_100139761 Ga0070668_1001397612 313
53 3300005353 Ga0070669_100277755 Ga0070669_1002777551 313
54 3300005536 Ga0070697_100213386 Ga0070697_1002133861 313
55 3300006358 Ga0068871_100243532 Ga0068871_1002435322 313
56 3300006846 Ga0075430_100301667 Ga0075430_1003016671 313
57 3300009147 Ga0114129_10203607 Ga0114129_102036072 313
58 3300009147 Ga0114129_10371458 Ga0114129_103714581 313
59 3300009177 Ga0105248_10156752 Ga0105248_101567521 313
60 3300009553 Ga0105249_10247575 Ga0105249_102475751 313
61 3300014325 Ga0163163_10158101 Ga0163163_101581012 313
62 3300025941 Ga0207711_10223830 Ga0207711_102238301 313
63 3300025972 Ga0207668_10186123 Ga0207668_101861232 313
64 3300026118 Ga0207675_100239602 Ga0207675_1002396022 313
65 3300046664 Ga0495659_0070534 Ga0495659_0070534_103_1251 313
66 3300047318 Ga0495636_0070252 Ga0495636_0070252_98_1246 313
67 3300047471 Ga0495684_0098766 Ga0495684_0098766_452_1576 313
68 3300049569 Ga0501032_0203386 Ga0501032_0203386_12_1136 313
69 3300049575 Ga0501039_0260688 Ga0501039_0260688_155_1294 313
70 3300049577 Ga0501041_0159642 Ga0501041_0159642_103_1242 313
71 3300049578 Ga0501042_0074211 Ga0501042_0074211_693_1832 313
72 3300049580 Ga0501046_0166676 Ga0501046_0166676_259_1398 313
73 3300049588 Ga0501072_0192883 Ga0501072_0192883_193_1332 313
74 3300049592 Ga0501076_0103559 Ga0501076_0103559_1037_2176 313
75 3300049593 Ga0501077_0078801 Ga0501077_0078801_307_1446 313
76 3300049743 Ga0501081_0150033 Ga0501081_0150033_61_1200 313
77 3300050507 nmdc:mga05p37_234118_c1 nmdc:mga05p37_234118_c1_454_1602 313
78 3300050507 nmdc:mga05p37_260474_c1 nmdc:mga05p37_260474_c1_544_1683 313
79 3300050507 nmdc:mga05p37_27458_c1 nmdc:mga05p37_27458_c1_449_1573 313
80 3300050509 nmdc:mga0qj67_282043_c1 nmdc:mga0qj67_282043_c1_118_1257 313
81 3300050510 nmdc:mga06r32_418258_c1 nmdc:mga06r32_418258_c1_118_1257 313
82 3300054114 Ga0501084_0292245 Ga0501084_0292245_124_1263 313
83 3300060353 Ga0501082_0083814 Ga0501082_0083814_1496_2635 313
84 3300061734 Ga0530510_0034637 Ga0530510_0034637_2244_3383 313
85 3300035089 Ga0373944_0052918 Ga0373944_0052918_105_1253 314
86 3300035692 Ga0373935_0113558 Ga0373935_0113558_89_1237 314
87 3300046473 Ga0495582_0046845 Ga0495582_0046845_70_1218 314
88 3300005328 Ga0070676_10115254 Ga0070676_101152542 315
89 3300005364 Ga0070673_100181743 Ga0070673_1001817432 315
90 3300005536 Ga0070697_100269968 Ga0070697_1002699682 315
91 3300005543 Ga0070672_100287679 Ga0070672_1002876792 315
92 3300006871 Ga0075434_100150393 Ga0075434_1001503933 315
93 3300006881 Ga0068865_100247918 Ga0068865_1002479181 315
94 3300007076 Ga0075435_100142061 Ga0075435_1001420612 315
95 3300009147 Ga0114129_10041982 Ga0114129_100419825 315
96 3300025938 Ga0207704_10092236 Ga0207704_100922362 315
97 3300042461 Ga0439460_0032573 Ga0439460_0032573_303_1427 315
98 3300042876 Ga0451577_0096940 Ga0451577_0096940_219_1343 315
99 3300046455 Ga0495603_0137395 Ga0495603_0137395_92_1240 315
100 3300046501 Ga0495607_0070222 Ga0495607_0070222_407_1555 315
101 3300046523 Ga0495644_0050820 Ga0495644_0050820_97_1245 315
102 3300046557 Ga0495622_0039375 Ga0495622_0039375_560_1708 315
103 3300046558 Ga0495633_0090172 Ga0495633_0090172_124_1272 315
104 3300046616 Ga0495668_0137337 Ga0495668_0137337_134_1282 315
105 3300046664 Ga0495659_0035270 Ga0495659_0035270_537_1661 315
106 3300046691 Ga0495670_0101748 Ga0495670_0101748_76_1224 315
107 3300046692 Ga0495671_0113739 Ga0495671_0113739_21_1145 315
108 3300047318 Ga0495636_0059189 Ga0495636_0059189_197_1321 315
109 3300047470 Ga0495681_0088970 Ga0495681_0088970_198_1346 315
110 3300048904 Ga0496101_0221000 Ga0496101_0221000_165_1289 315
111 3300048909 Ga0496106_0247953 Ga0496106_0247953_186_1310 315
112 3300048910 Ga0496107_0223649 Ga0496107_0223649_136_1260 315
113 3300048917 Ga0496114_0101282 Ga0496114_0101282_1171_2295 315
114 3300048917 Ga0496114_0190268 Ga0496114_0190268_415_1539 315
115 3300050507 nmdc:mga05p37_11793_c1 nmdc:mga05p37_11793_c1_7213_8337 315
116 3300050512 nmdc:mga0n895_294700_c1 nmdc:mga0n895_294700_c1_373_1521 315
117 3300050513 nmdc:mga0rr50_208891_c1 nmdc:mga0rr50_208891_c1_118_1266 315
118 3300050514 nmdc:mga08x19_144978_c1 nmdc:mga08x19_144978_c1_91_1239 315
119 3300005615 Ga0070702_100222364 Ga0070702_1002223642 317
120 3300021384 Ga0213876_10000141 Ga0213876_1000014146 317
121 3300039437 Ga0436365_0289912 Ga0436365_0289912_3170_4123 317
122 3300005459 Ga0068867_100265072 Ga0068867_1002650721 318
123 3300031727 Ga0316576_10173102 Ga0316576_101731021 320
124 3300036647 Ga0316582_0186732 Ga0316582_0186732_170_1351 320
125 3300039062 Ga0400483_135845 Ga0400483_135845_404_1585 320
126 3300039062 Ga0400483_274677 Ga0400483_274677_260_1441 320
127 3300003320 rootH2_10212059 rootH2_102120591 321
128 3300003322 rootL2_10302433 rootL2_103024332 321
129 3300005290 Ga0065712_10107169 Ga0065712_101071692 321
130 3300005353 Ga0070669_100133212 Ga0070669_1001332122 321
131 3300005354 Ga0070675_100242545 Ga0070675_1002425452 321
132 3300005355 Ga0070671_100070558 Ga0070671_1000705581 321
133 3300005445 Ga0070708_100085461 Ga0070708_1000854611 321
134 3300005445 Ga0070708_100313755 Ga0070708_1003137551 321
135 3300005467 Ga0070706_100191507 Ga0070706_1001915072 321
136 3300005467 Ga0070706_100334164 Ga0070706_1003341641 321
137 3300005518 Ga0070699_100082402 Ga0070699_1000824022 321
138 3300005616 Ga0068852_100306661 Ga0068852_1003066611 321
139 3300005841 Ga0068863_100109244 Ga0068863_1001092443 321
140 3300005841 Ga0068863_100218430 Ga0068863_1002184302 321
141 3300005843 Ga0068860_100002044 Ga0068860_1000020442 321
142 3300005843 Ga0068860_100376721 Ga0068860_1003767211 321
143 3300005937 Ga0081455_10070133 Ga0081455_100701332 321
144 3300005981 Ga0081538_10050942 Ga0081538_100509422 321
145 3300006844 Ga0075428_100385472 Ga0075428_1003854722 321
146 3300006847 Ga0075431_100383671 Ga0075431_1003836711 321
147 3300006871 Ga0075434_100332187 Ga0075434_1003321872 321
148 3300006871 Ga0075434_100356890 Ga0075434_1003568901 321
149 3300009553 Ga0105249_10072934 Ga0105249_100729344 321
150 3300013306 Ga0163162_10283888 Ga0163162_102838881 321
151 3300013306 Ga0163162_10385593 Ga0163162_103855931 321
152 3300021384 Ga0213876_10010443 Ga0213876_100104434 321
153 3300026075 Ga0207708_10014028 Ga0207708_100140288 321
154 3300026088 Ga0207641_10150214 Ga0207641_101502141 321
155 3300028381 Ga0268264_10001303 Ga0268264_1000130325 321
156 3300028381 Ga0268264_10006635 Ga0268264_100066351 321
157 3300031548 Ga0307408_100176566 Ga0307408_1001765661 321
158 3300031548 Ga0307408_100288533 Ga0307408_1002885331 321
159 3300031731 Ga0307405_10179603 Ga0307405_101796031 321
160 3300031731 Ga0307405_10211028 Ga0307405_102110281 321
161 3300031824 Ga0307413_10009428 Ga0307413_100094283 321
162 3300031824 Ga0307413_10051438 Ga0307413_100514383 321
163 3300031824 Ga0307413_10148222 Ga0307413_101482221 321
164 3300031824 Ga0307413_10154465 Ga0307413_101544651 321
165 3300031852 Ga0307410_10042881 Ga0307410_100428811 321
166 3300031852 Ga0307410_10048099 Ga0307410_100480992 321
167 3300031852 Ga0307410_10107468 Ga0307410_101074682 321
168 3300031852 Ga0307410_10152405 Ga0307410_101524052 321
169 3300031901 Ga0307406_10069869 Ga0307406_100698692 321
170 3300031901 Ga0307406_10076191 Ga0307406_100761912 321
171 3300031901 Ga0307406_10112472 Ga0307406_101124722 321
172 3300031901 Ga0307406_10162125 Ga0307406_101621252 321
173 3300031903 Ga0307407_10080081 Ga0307407_100800812 321
174 3300031903 Ga0307407_10088977 Ga0307407_100889771 321
175 3300031903 Ga0307407_10102627 Ga0307407_101026272 321
176 3300031903 Ga0307407_10140305 Ga0307407_101403051 321
177 3300031911 Ga0307412_10008131 Ga0307412_100081312 321
178 3300031995 Ga0307409_100075135 Ga0307409_1000751352 321
179 3300031995 Ga0307409_100149831 Ga0307409_1001498311 321
180 3300031995 Ga0307409_100276446 Ga0307409_1002764461 321
181 3300031995 Ga0307409_100334951 Ga0307409_1003349511 321
182 3300032002 Ga0307416_100064486 Ga0307416_1000644864 321
183 3300032002 Ga0307416_100218773 Ga0307416_1002187732 321
184 3300032002 Ga0307416_100377993 Ga0307416_1003779931 321
185 3300032002 Ga0307416_100434015 Ga0307416_1004340151 321
186 3300032004 Ga0307414_10007466 Ga0307414_100074662 321
187 3300032004 Ga0307414_10026217 Ga0307414_100262171 321
188 3300032004 Ga0307414_10201987 Ga0307414_102019872 321
189 3300032005 Ga0307411_10097859 Ga0307411_100978592 321
190 3300032005 Ga0307411_10174076 Ga0307411_101740761 321
191 3300032005 Ga0307411_10207967 Ga0307411_102079671 321
192 3300032126 Ga0307415_100100525 Ga0307415_1001005252 321
193 3300032126 Ga0307415_100148332 Ga0307415_1001483321 321
194 3300032126 Ga0307415_100181582 Ga0307415_1001815822 321
195 3300042876 Ga0451577_0261375 Ga0451577_0261375_209_1363 321
196 3300044842 Ga0466957_0055332 Ga0466957_0055332_1122_2276 321
197 3300045051 Ga0451576_0279234 Ga0451576_0279234_18_1172 321
198 3300046492 Ga0495585_0084265 Ga0495585_0084265_353_1477 321
199 3300046523 Ga0495644_0038455 Ga0495644_0038455_293_1417 321
200 3300046537 Ga0495598_0046204 Ga0495598_0046204_153_1277 321
201 3300046539 Ga0495621_0011069 Ga0495621_0011069_1453_2577 321
202 3300046558 Ga0495633_0061174 Ga0495633_0061174_272_1396 321
203 3300046665 Ga0495661_0107256 Ga0495661_0107256_221_1345 321
204 3300046684 Ga0495669_0068254 Ga0495669_0068254_345_1469 321
205 3300046691 Ga0495670_0093074 Ga0495670_0093074_339_1463 321
206 3300050512 nmdc:mga0n895_353127_c1 nmdc:mga0n895_353127_c1_286_1410 321
207 3300050515 nmdc:mga0a205_137342_c1 nmdc:mga0a205_137342_c1_247_1371 321
208 3300060353 Ga0501082_0268920 Ga0501082_0268920_225_1379 321

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13683

rve_3

Integrase core domain

234

299

0.97

PF00665

rve

Integrase core domain

141

246

0.91

PF13565

HTH_32

Homeodomain-like domain

39

116

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6qbt-assembly1.cif.gz_A structure of the htlv-2 integrase catalytic core domain in complex with magnesium (trimeric form) 0.8517 134 295
6qbv-assembly1.cif.gz_B structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.8516 134 293
6qbt-assembly1.cif.gz_A structure of the htlv-2 integrase catalytic core domain in complex with magnesium (trimeric form) 0.8305 134 295
4pa1-assembly1.cif.gz_A crystal structure of catalytic core domain of fiv integrase 0.8292 137 293
6qbv-assembly1.cif.gz_B structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.8192 134 293
ID Description Score Start End Superfamily
af_P37007_135_295_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9335 129 289 3.30.420.10
af_P37007_135_295_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9224 129 289 3.30.420.10
af_I6YC39_133_303_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8915 130 294 3.30.420.10
af_Q21972_79_144_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8894 2 49 1.10.10.10
af_Q09575_838_1038_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8836 125 294 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A246U0U1-F1-model_v4 Integrase 0.9657 130 313 GO:0003676
GO:0015074
AF-A0A443FWB5-F1-model_v4 deleted 0.9623 151 237
AF-A0A2V7EB11-F1-model_v4 IS481 family transposase 0.9622 135 315 GO:0003676
GO:0015074
AF-X0WTW0-F1-model_v4 Integrase catalytic domain-containing protein 0.9589 132 276 GO:0003676
GO:0015074
AF-A0A1B2Z255-F1-model_v4 Transposase 0.9529 142 307 GO:0003676
GO:0015074

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pLDDT pTM Quality
85.96 0.73 High
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Predicted Structure (AlphaFold2)

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