F317145

General Info

Members Datasets Scaffolds Average Seq Length
207 123 415 491

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2839989709|2839992360
Length 577
Sequence ILSSLIFSPLLAALVVLLLPLRLQKLIKTITLLGTLGQMVLAIWLYIQFNGAAASNGQQGYQFVEKLNWIGFSLGTLGRFQIDYFLGVDGISVSMVLLTGIIGVIGVISSWTIKKNIKGYFLLYLLLLTSVMGCFLALDFFLFYLFFEFMLLPMYFLIGIWGGPKREYAAIKFFIYTLVGSLFILIVMIGLYTSVIDPLATATQLGLLEKGIPQPDAIRQVQQLLQQNMISSADLVRTFSIPAMMEPANFIPGSLLHVLSGVVLWSLPIRFIAFLLLFAGFAIKVPVVPVHTWLPDAHVEAPTPISVLLAAILLKVGGYGLIRIVYPVFPDAAAYFAVLVGGLGVLSIIYGALCALAMNDLKKLIAYSSVSHMGFVLLGLASLTVEGVNGAVYMMFSHGIISAMLFLVVGVIYDRAHDRMILNFRGLAKRMPAYTTFVVIAFFASLGLPGFSGFIAELLVLVGGFSAPEMSGLLPRWLTVVAVFGLLLAAAYYLWALQRMFFGKYWIFPELREKAVLTDLNAREYLMLVPLAILALLFGIFPHLLLNKIGTTITGFTQTVLQSGQEQLHMVLSTWVQ

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
68 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
69 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
70 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
71 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
72 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
73 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
74 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
75 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
76 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
77 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
78 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
79 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
80 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
81 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
82 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
83 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
84 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
85 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
86 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
87 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
90 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
91 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
101 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
104 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
105 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
106 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
107 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
108 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
109 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
112 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
113 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
114 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
115 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
116 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
117 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
118 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
119 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
120 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
121 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
122 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
123 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.14
Metatranscriptomes 0
Isolates 3.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.8
Nodule 0
Rhizoplane 0.97
Rhizosphere 85.99
Stem 0
Stem Tuber 0
Unclassified 5.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10001870 3300003316 Bacteria 68851
2 rootH1_10059906 3300003316 Bacteria 4692
3 rootH2_10002538 3300003320 Bacteria 43669
4 rootL2_10009529 3300003322 Bacteria 24087
5 rootL2_10014834 3300003322 Bacteria 13285
6 rootL2_10021916 3300003322 Bacteria 7767
7 rootL2_10084883 3300003322 Bacteria 3359
8 rootL2_10163783 3300003322 Bacteria 3800
9 rootH1_10003782 3300003316 Bacteria 1149
10 rootH1_10003782 3300003323 Bacteria 43069
11 rootH1_10010466 3300003323 Bacteria 53551
12 Ga0055536_1003023 3300003781 Bacteria 9202
13 Ga0055531_10000796 3300003794 Bacteria 26168
14 Ga0065165_1000478 3300005262 Bacteria 62182
15 Ga0065165_1001120 3300005262 Bacteria 31622
16 Ga0070658_10029382 3300005327 Bacteria 4415
17 Ga0070658_10034757 3300005327 Unclassified 4056
18 Ga0070683_100054336 3300005329 Bacteria 3714
19 Ga0070683_100087520 3300005329 Bacteria 2922
20 Ga0070683_100111594 3300005329 Bacteria 2580
21 Ga0068869_100013612 3300005334 Bacteria 5415
22 Ga0068868_100114489 3300005338 Bacteria 2194
23 Ga0070661_100007502 3300005344 Bacteria 7527
24 Ga0070661_100074932 3300005344 Bacteria 2493
25 Ga0070659_100011056 3300005366 Bacteria 6666
26 Ga0070679_100071630 3300005530 Bacteria 3457
27 Ga0070684_100043750 3300005535 Bacteria 3869
28 Ga0068853_100000074 3300005539 Bacteria 69174
29 Ga0068853_100021150 3300005539 Bacteria 5418
30 Ga0068853_100143287 3300005539 Unclassified 2146
31 Ga0070686_100001515 3300005544 Bacteria 13053
32 Ga0070665_100017930 3300005548 Bacteria 7109
33 Ga0068855_100001215 3300005563 Bacteria 31959
34 Ga0068855_100001514 3300005563 Bacteria 29103
35 Ga0068855_100008602 3300005563 Bacteria 12337
36 Ga0068855_100033733 3300005563 Bacteria 6106
37 Ga0068857_100001254 3300005577 Bacteria 19874
38 Ga0068857_100083829 3300005577 Unclassified 2848
39 Ga0068854_100029212 3300005578 Bacteria 3816
40 Ga0068856_100007688 3300005614 Bacteria 10514
41 Ga0068856_100031505 3300005614 Bacteria 5188
42 Ga0068856_100035489 3300005614 Bacteria 4887
43 Ga0068852_100000073 3300005616 Bacteria 69820
44 Ga0068852_100000212 3300005616 Bacteria 39661
45 Ga0068859_100003777 3300005617 Bacteria 15453
46 Ga0068859_100090071 3300005617 Bacteria 3118
47 Ga0068860_100034519 3300005843 Archaea 4853
48 Ga0068862_100076890 3300005844 Bacteria 2889
49 Ga0097621_100012391 3300006237 Bacteria 6319
50 Ga0075428_100003647 3300006844 Bacteria 16886
51 Ga0075429_100067503 3300006880 Bacteria 3112
52 Ga0097620_100003777 3300006931 Bacteria 15453
53 Ga0097620_100090069 3300006931 Bacteria 3118
54 Ga0105240_10000110 3300009093 Bacteria 171018
55 Ga0105240_10003498 3300009093 Bacteria 24350
56 Ga0105240_10020486 3300009093 Bacteria 8818
57 Ga0105240_10079005 3300009093 Bacteria 4050
58 Ga0111539_10005812 3300009094 Bacteria 15945
59 Ga0111539_10008752 3300009094 Bacteria 12839
60 Ga0105245_10019805 3300009098 Bacteria 5898
61 Ga0105241_10001439 3300009174 Bacteria 18231
62 Ga0105241_10002422 3300009174 Bacteria 13998
63 Ga0105241_10012762 3300009174 Bacteria 6165
64 Ga0105248_10008178 3300009177 Bacteria 11488
65 Ga0105248_10042366 3300009177 Bacteria 5106
66 Ga0105248_10054110 3300009177 Bacteria 4501
67 Ga0105237_10024717 3300009545 Bacteria 6145
68 Ga0105238_10000022 3300009551 Bacteria 204310
69 Ga0105238_10015298 3300009551 Bacteria 7771
70 Ga0105238_10017477 3300009551 Bacteria 7290
71 Ga0105238_10066959 3300009551 Bacteria 3593
72 Ga0105238_10094223 3300009551 Bacteria 2982
73 Ga0105239_10006929 3300010375 Bacteria 13073
74 Ga0105239_10039106 3300010375 Bacteria 5197
75 Ga0105239_10113196 3300010375 Bacteria 3009
76 Ga0105246_10017934 3300011119 Bacteria 4505
77 Ga0157370_10000001 3300013104 Bacteria 529517
78 Ga0157370_10026297 3300013104 Bacteria 5748
79 Ga0157369_10000017 3300013105 Bacteria 246520
80 Ga0157369_10003868 3300013105 Bacteria 17787
81 Ga0157369_10004551 3300013105 Bacteria 16308
82 Ga0157369_10098467 3300013105 Bacteria 3119
83 Ga0163162_10026000 3300013306 Bacteria 5785
84 Ga0157372_10000019 3300013307 Bacteria 209591
85 Ga0157372_10003217 3300013307 Bacteria 17626
86 Ga0157372_10011598 3300013307 Bacteria 9380
87 Ga0157372_10012636 3300013307 Bacteria 8994
88 Ga0157372_10196634 3300013307 Bacteria 2336
89 Ga0157375_10018796 3300013308 Archaea 6272
90 Ga0157380_10053037 3300014326 Unclassified 3213
91 Ga0209676_1000488 3300025292 Bacteria 64408
92 Ga0209050_1003729 3300025298 Bacteria 10954
93 Ga0209257_1000023 3300025304 Bacteria 753019
94 Ga0207705_10003109 3300025909 Bacteria 12661
95 Ga0207654_10000059 3300025911 Bacteria 75594
96 Ga0207654_10000148 3300025911 Bacteria 44438
97 Ga0207654_10060809 3300025911 Bacteria 2208
98 Ga0207695_10000026 3300025913 Bacteria 624558
99 Ga0207695_10000096 3300025913 Bacteria 265048
100 Ga0207695_10000168 3300025913 Bacteria 193087
101 Ga0207671_10000022 3300025914 Bacteria 277803
102 Ga0207671_10065939 3300025914 Bacteria 2694
103 Ga0207649_10026733 3300025920 Unclassified 3379
104 Ga0207652_10069627 3300025921 Unclassified 3055
105 Ga0207694_10000009 3300025924 Bacteria 460687
106 Ga0207694_10040703 3300025924 Unclassified 3579
107 Ga0207687_10102366 3300025927 Bacteria 2110
108 Ga0207690_10019149 3300025932 Unclassified 4208
109 Ga0207711_10103373 3300025941 Bacteria 2523
110 Ga0207689_10034727 3300025942 Bacteria 4187
111 Ga0207667_10009885 3300025949 Bacteria 11194
112 Ga0207667_10013408 3300025949 Bacteria 9378
113 Ga0207667_10030231 3300025949 Bacteria 5862
114 Ga0207667_10032783 3300025949 Bacteria 5592
115 Ga0207658_10060546 3300025986 Bacteria 2825
116 Ga0207703_10009253 3300026035 Bacteria 7748
117 Ga0207639_10000065 3300026041 Bacteria 98610
118 Ga0207702_10031572 3300026078 Bacteria 4414
119 Ga0207702_10121992 3300026078 Bacteria 2334
120 Ga0207674_10002547 3300026116 Bacteria 22963
121 Ga0207674_10006526 3300026116 Bacteria 13713
122 Ga0207674_10141563 3300026116 Unclassified 2364
123 Ga0207698_10000018 3300026142 Bacteria 176540
124 Ga0207698_10000028 3300026142 Bacteria 117250
125 Ga0265337_1000712 3300028556 Bacteria 17502
126 Ga0265337_1007381 3300028556 Bacteria 4118
127 Ga0265326_10000826 3300028558 Bacteria 11392
128 Ga0265319_1000263 3300028563 Bacteria 39781
129 Ga0265319_1000554 3300028563 Bacteria 25340
130 Ga0265319_1011639 3300028563 Bacteria 3590
131 Ga0265334_10001748 3300028573 Bacteria 10384
132 Ga0265318_10002056 3300028577 Bacteria 11056
133 Ga0265323_10000779 3300028653 Bacteria 17056
134 Ga0265323_10000978 3300028653 Bacteria 14880
135 Ga0265322_10000061 3300028654 Bacteria 53080
136 Ga0265336_10000326 3300028666 Bacteria 31895
137 Ga0307515_10000557 3300028794 Bacteria 87964
138 Ga0265338_10000106 3300028800 Bacteria 153890
139 Ga0265338_10000608 3300028800 Bacteria 62768
140 Ga0265338_10019224 3300028800 Bacteria 7266
141 Ga0265338_10019832 3300028800 Bacteria 7107
142 Ga0265324_10000352 3300029957 Bacteria 33340
143 Ga0265330_10000649 3300031235 Bacteria 22386
144 Ga0265332_10000152 3300031238 Bacteria 55802
145 Ga0265328_10002743 3300031239 Bacteria 7875
146 Ga0265320_10000941 3300031240 Bacteria 21710
147 Ga0265320_10008462 3300031240 Bacteria 6297
148 Ga0265329_10001178 3300031242 Bacteria 12860
149 Ga0265339_10000667 3300031249 Bacteria 26496
150 Ga0265327_10035122 3300031251 Bacteria 2775
151 Ga0265316_10000312 3300031344 Bacteria 54031
152 Ga0265316_10009902 3300031344 Bacteria 8732
153 Ga0265316_10053301 3300031344 Bacteria 3170
154 Ga0307509_10009914 3300031507 Bacteria 11775
155 Ga0307509_10033144 3300031507 Bacteria 5687
156 Ga0265313_10001566 3300031595 Bacteria 21224
157 Ga0265313_10016167 3300031595 Bacteria 4302
158 Ga0265314_10000493 3300031711 Bacteria 51198
159 Ga0265342_10000365 3300031712 Bacteria 49944
160 Ga0265342_10003706 3300031712 Bacteria 12386
161 Ga0307405_10054248 3300031731 Bacteria 2501
162 Ga0307518_10005381 3300031838 Bacteria 9147
163 Ga0451577_0001063 3300042876 Bacteria 39602
164 Ga0451577_0016283 3300042876 Bacteria 6890
165 Ga0453683_0000499 3300044673 Bacteria 44878
166 Ga0453683_0096970 3300044673 Bacteria 1850
167 Ga0466963_0009625 3300044694 Bacteria 5825
168 Ga0453684_0000039 3300044712 Bacteria 697730
169 Ga0453684_0004908 3300044712 Bacteria 27376
170 Ga0453684_0025163 3300044712 Bacteria 8653
171 Ga0453684_0100626 3300044712 Bacteria 3537
172 Ga0451576_0010137 3300045051 Bacteria 10847
173 Ga0451576_0017784 3300045051 Bacteria 7810
174 Ga0451576_0021462 3300045051 Bacteria 7018
175 Ga0451576_0058075 3300045051 Bacteria 4044
176 Ga0451576_0064996 3300045051 Unclassified 3799
177 Ga0495638_0000001 3300046460 Bacteria 1114121
178 Ga0495625_0090458 3300046660 Bacteria 2117
179 Ga0495686_0006957 3300047472 Bacteria 8548
180 Ga0496115_0005335 3300048918 Bacteria 9351
181 Ga0496115_0083417 3300048918 Unclassified 2605
182 Ga0501300_001231 3300049523 Bacteria 3885
183 Ga0501034_0308743 3300049571 Bacteria 1517
184 Ga0501072_0181840 3300049588 Bacteria 1677
185 Ga0501076_0085428 3300049592 Bacteria 2536
186 Ga0501236_000056 3300049670 Bacteria 9949
187 Ga0501257_000331 3300049686 Bacteria 9135
188 Ga0501257_006548 3300049686 Bacteria 2586
189 Ga0501225_0006386 3300049705 Bacteria 3441
190 Ga0501080_0132084 3300049742 Bacteria 2312
191 Ga0501264_001003 3300049761 Bacteria 3425
192 Ga0501035_0184576 3300049822 Bacteria 1796
193 nmdc:mga08y16_11148_c1 3300050511 Bacteria 9439
194 nmdc:mga08y16_11710_c1 3300050511 Bacteria 9216
195 Ga0500655_007674 3300053133 Bacteria 1943
196 Ga0500616_0000009 3300053153 Bacteria 779095
197 Ga0500622_0000048 3300053156 Bacteria 147112
198 Ga0500622_0000052 3300053156 Bacteria 145201
199 Ga0500622_0001448 3300053156 Bacteria 19019
200 Ga0530510_0009599 3300061734 Bacteria 6786
201 2839992360 2839989709 Bacteria 3773432
202 2522549284 2522125168 Bacteria 7376607
203 2804849511 2802429296 Bacteria 7227771
204 2910249820 2910245624 Bacteria 6935613
205 2911139218 2911138879 Bacteria 5811561
206 2954389884 2954380949 Bacteria 10050426
207 3006495716 3006493962 Bacteria 8825450
208 8025414565 8025413630 Bacteria 7014048
209 rootH1_10001870
210 rootH1_10059906
211 rootH2_10002538
212 rootL2_10009529
213 rootL2_10014834
214 rootL2_10021916
215 rootL2_10084883
216 rootL2_10163783
217 rootH1_10003782
218 rootH1_10010466
219 Ga0055536_1003023
220 Ga0055531_10000796
221 Ga0065165_1000478
222 Ga0065165_1001120
223 Ga0070658_10029382
224 Ga0070658_10034757
225 Ga0070683_100054336
226 Ga0070683_100087520
227 Ga0070683_100111594
228 Ga0068869_100013612
229 Ga0068868_100114489
230 Ga0070661_100007502
231 Ga0070661_100074932
232 Ga0070659_100011056
233 Ga0070679_100071630
234 Ga0070684_100043750
235 Ga0068853_100000074
236 Ga0068853_100021150
237 Ga0068853_100143287
238 Ga0070686_100001515
239 Ga0070665_100017930
240 Ga0068855_100001215
241 Ga0068855_100001514
242 Ga0068855_100008602
243 Ga0068855_100033733
244 Ga0068857_100001254
245 Ga0068857_100083829
246 Ga0068854_100029212
247 Ga0068856_100007688
248 Ga0068856_100031505
249 Ga0068856_100035489
250 Ga0068852_100000073
251 Ga0068852_100000212
252 Ga0068859_100003777
253 Ga0068859_100090071
254 Ga0068860_100034519
255 Ga0068862_100076890
256 Ga0097621_100012391
257 Ga0075428_100003647
258 Ga0075429_100067503
259 Ga0097620_100003777
260 Ga0097620_100090069
261 Ga0105240_10000110
262 Ga0105240_10003498
263 Ga0105240_10020486
264 Ga0105240_10079005
265 Ga0111539_10005812
266 Ga0111539_10008752
267 Ga0105245_10019805
268 Ga0105241_10001439
269 Ga0105241_10002422
270 Ga0105241_10012762
271 Ga0105248_10008178
272 Ga0105248_10042366
273 Ga0105248_10054110
274 Ga0105237_10024717
275 Ga0105238_10000022
276 Ga0105238_10015298
277 Ga0105238_10017477
278 Ga0105238_10066959
279 Ga0105238_10094223
280 Ga0105239_10006929
281 Ga0105239_10039106
282 Ga0105239_10113196
283 Ga0105246_10017934
284 Ga0157370_10000001
285 Ga0157370_10026297
286 Ga0157369_10000017
287 Ga0157369_10003868
288 Ga0157369_10004551
289 Ga0157369_10098467
290 Ga0163162_10026000
291 Ga0157372_10000019
292 Ga0157372_10003217
293 Ga0157372_10011598
294 Ga0157372_10012636
295 Ga0157372_10196634
296 Ga0157375_10018796
297 Ga0157380_10053037
298 Ga0209676_1000488
299 Ga0209050_1003729
300 Ga0209257_1000023
301 Ga0207705_10003109
302 Ga0207654_10000059
303 Ga0207654_10000148
304 Ga0207654_10060809
305 Ga0207695_10000026
306 Ga0207695_10000096
307 Ga0207695_10000168
308 Ga0207671_10000022
309 Ga0207671_10065939
310 Ga0207649_10026733
311 Ga0207652_10069627
312 Ga0207694_10000009
313 Ga0207694_10040703
314 Ga0207687_10102366
315 Ga0207690_10019149
316 Ga0207711_10103373
317 Ga0207689_10034727
318 Ga0207667_10009885
319 Ga0207667_10013408
320 Ga0207667_10030231
321 Ga0207667_10032783
322 Ga0207658_10060546
323 Ga0207703_10009253
324 Ga0207639_10000065
325 Ga0207702_10031572
326 Ga0207702_10121992
327 Ga0207674_10002547
328 Ga0207674_10006526
329 Ga0207674_10141563
330 Ga0207698_10000018
331 Ga0207698_10000028
332 Ga0265337_1000712
333 Ga0265337_1007381
334 Ga0265326_10000826
335 Ga0265319_1000263
336 Ga0265319_1000554
337 Ga0265319_1011639
338 Ga0265334_10001748
339 Ga0265318_10002056
340 Ga0265323_10000779
341 Ga0265323_10000978
342 Ga0265322_10000061
343 Ga0265336_10000326
344 Ga0307515_10000557
345 Ga0265338_10000106
346 Ga0265338_10000608
347 Ga0265338_10019224
348 Ga0265338_10019832
349 Ga0265324_10000352
350 Ga0265330_10000649
351 Ga0265332_10000152
352 Ga0265328_10002743
353 Ga0265320_10000941
354 Ga0265320_10008462
355 Ga0265329_10001178
356 Ga0265339_10000667
357 Ga0265327_10035122
358 Ga0265316_10000312
359 Ga0265316_10009902
360 Ga0265316_10053301
361 Ga0307509_10009914
362 Ga0307509_10033144
363 Ga0265313_10001566
364 Ga0265313_10016167
365 Ga0265314_10000493
366 Ga0265342_10000365
367 Ga0265342_10003706
368 Ga0307405_10054248
369 Ga0307518_10005381
370 Ga0451577_0001063
371 Ga0451577_0016283
372 Ga0453683_0000499
373 Ga0453683_0096970
374 Ga0466963_0009625
375 Ga0453684_0000039
376 Ga0453684_0004908
377 Ga0453684_0025163
378 Ga0453684_0100626
379 Ga0451576_0010137
380 Ga0451576_0017784
381 Ga0451576_0021462
382 Ga0451576_0058075
383 Ga0451576_0064996
384 Ga0495638_0000001
385 Ga0495625_0090458
386 Ga0495686_0006957
387 Ga0496115_0005335
388 Ga0496115_0083417
389 Ga0501300_001231
390 Ga0501034_0308743
391 Ga0501072_0181840
392 Ga0501076_0085428
393 Ga0501236_000056
394 Ga0501257_000331
395 Ga0501257_006548
396 Ga0501225_0006386
397 Ga0501080_0132084
398 Ga0501264_001003
399 Ga0501035_0184576
400 nmdc:mga08y16_11148_c1
401 nmdc:mga08y16_11710_c1
402 Ga0500655_007674
403 Ga0500616_0000009
404 Ga0500622_0000048
405 Ga0500622_0000052
406 Ga0500622_0001448
407 Ga0530510_0009599
408 2839992360
409 2522549284
410 2804849511
411 2910249820
412 2911139218
413 2954389884
414 3006495716
415 8025414565

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00361

Proton_antipo_M

Proton-conducting membrane transporter

137

485

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hum-assembly1.cif.gz_D structure of the photosynthetic complex i from thermosynechococcus elongatus 0.9314 6 529
6nby-assembly1.cif.gz_D t.elongatus ndh (composite model) 0.931 6 528
7ar7-assembly1.cif.gz_M cryo-em structure of arabidopsis thaliana complex-i (open conformation) 0.9305 6 525
8e73-assembly1.cif.gz_4M vigna radiata supercomplex i+iii2 (full bridge) 0.9302 6 525
7aqq-assembly1.cif.gz_M cryo-em structure of arabidopsis thaliana complex-i (membrane core) 0.9289 6 292
ID Description Score Start End Superfamily
af_M1FQK6_1_136_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9012 7 135 1.20.1070.10
af_P26288_1_130_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.8786 1 133 1.20.1070.10
af_P26288_1_130_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.8658 1 133 1.20.1070.10
af_M1FQK6_1_136_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.819 7 135 1.20.1070.10
af_P0AFE8_1_132_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.8153 5 133 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A7V9NRB8-F1-model_v4 NADH-quinone oxidoreductase subunit M 0.9745 268 534 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A520ZVG9-F1-model_v4 NADH-quinone oxidoreductase subunit M 0.974 249 535 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A660ZPY6-F1-model_v4 NADH-quinone oxidoreductase subunit M 0.9735 140 526 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A7J4UY86-F1-model_v4 NADH-quinone oxidoreductase subunit M (EC 1.6.5.-) 0.9718 262 526 GO:0003954
GO:0008137
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A099DBI5-F1-model_v4 deleted 0.9677 301 436

Map