F316793

General Info

Members Datasets Scaffolds Average Seq Length
207 167 414 303

Family's Representative Sequence

Representative Sequence 3300041512|Ga0451853_3308924|Ga0451853_3308924_1109_2047
Length 288
Sequence MLHLRLITPADGTDAVVRLIENTVGTTHLVVMPGAARNPAGDVVMCDVAREAGDELLTGLQELGLDKTGSIAVENIDLSLGEGADAVLWEHLTEATHEESTLSITYVAFITLATMIAACGVVLDNAILIVGAMAVGPEFGPLAGVSTSIVRRAPRLALRSLIALLVGFAVAALGQFSQEQLDGARPQTGFVYAPDAFSFIVAVLAGAAGTLSLTSAKSGALVGVAISVTTVPAAANAAVALSYGDTKQTWGSTEQLLLNLLGIILAGTLTLLAQKYLWARQRRSGQLT

Samples

Sample ID Description Type Environment
1 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
8 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
9 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
10 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
11 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
12 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
13 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
14 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
15 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
16 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
17 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
21 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
22 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
23 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
24 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
25 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
26 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
27 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
28 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
29 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
30 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
31 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
32 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
33 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
34 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
35 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
36 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
37 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
38 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
39 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
40 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
41 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
42 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
43 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
44 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
45 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
46 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
47 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
48 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
49 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
50 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
51 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
52 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
53 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
54 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
55 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
56 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
57 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
58 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
59 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
60 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
61 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
62 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
63 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
64 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
65 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
66 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
67 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
68 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
69 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
70 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
71 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
72 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
73 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
74 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
75 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
76 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
79 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
80 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
81 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
82 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
83 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
84 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
85 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
86 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
87 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
88 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
106 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
107 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
108 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
109 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
110 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
111 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
112 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
113 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
114 2643221670 Streptomyces sp. Root431 Isolate Unclassified
115 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
116 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
117 2643221714 Streptomyces sp. Root264 Isolate Unclassified
118 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
119 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
120 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
121 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
122 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
123 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
124 2808606448 Streptomyces sp. 193411 Isolate Unclassified
125 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
126 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
127 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
128 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
129 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
130 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
131 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
132 2867428634 Streptomyces sp. RP5T Isolate Unclassified
133 2867475112 Streptomyces sp. TM32 Isolate Unclassified
134 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
135 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
136 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
137 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
138 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
139 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
140 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
141 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
142 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
143 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
144 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
145 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
146 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
147 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
148 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
149 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
150 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
151 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
152 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
153 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
154 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
155 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
156 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
157 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
158 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
159 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
160 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
161 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
162 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
163 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
164 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
165 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
166 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
167 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 71.01
Metatranscriptomes 0.97
Isolates 28.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.35
Nodule 0.97
Rhizoplane 0.97
Rhizosphere 71.01
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451853_3308924 3300041512 Bacteria 3155
2 JGI24739J22299_10008107 3300001989 Bacteria 3924
3 JGI24737J22298_10048950 3300001990 Bacteria 1286
4 rootH1_10019492 3300003323 Bacteria 3661
5 rootH1_10073337 3300003323 Bacteria 1270
6 JGI25160J50197_1007373 3300003354 Bacteria 4312
7 Ga0006562J51391_1055254 3300003578 Bacteria 4150
8 Ga0006562J51391_1055259 3300003578 Bacteria 2630
9 Ga0075367_10007772 3300006178 Bacteria 5515
10 Ga0075370_10066996 3300006353 Bacteria 2049
11 Ga0105251_10011373 3300009011 Bacteria 5087
12 Ga0105248_10127703 3300009177 Bacteria 2869
13 Ga0105246_10002569 3300011119 Bacteria 10977
14 Ga0105246_10297021 3300011119 Bacteria 1302
15 Ga0182008_10000155 3300014497 Bacteria 54054
16 Ga0182007_10000136 3300015262 Bacteria 51316
17 Ga0183367_1002 3300015688 Bacteria 1101531
18 Ga0209758_1009776 3300025297 Bacteria 5878
19 Ga0207426_1044333 3300025302 Bacteria 1360
20 Ga0207647_10008740 3300025904 Bacteria 7232
21 Ga0207711_10304850 3300025941 Bacteria 1469
22 Ga0207639_10214097 3300026041 Bacteria 1660
23 Ga0307515_10040225 3300028794 Bacteria 7399
24 Ga0307515_10229420 3300028794 Bacteria 1653
25 Ga0307511_10059083 3300030521 Bacteria 2954
26 Ga0307512_10006420 3300030522 Bacteria 11916
27 Ga0307512_10039509 3300030522 Bacteria 3952
28 Ga0307513_10018680 3300031456 Bacteria 8279
29 Ga0307513_10083782 3300031456 Bacteria 3277
30 Ga0307509_10061269 3300031507 Bacteria 3973
31 Ga0307509_10192830 3300031507 Bacteria 1886
32 Ga0307508_10035928 3300031616 Bacteria 4463
33 Ga0307514_10001786 3300031649 Bacteria 24306
34 Ga0307514_10011273 3300031649 Bacteria 7432
35 Ga0307516_10002850 3300031730 Bacteria 22777
36 Ga0307518_10113156 3300031838 Bacteria 1931
37 Ga0307410_10476449 3300031852 Bacteria 1023
38 Ga0395900_0361569 3300037418 Bacteria 1423
39 Ga0395898_0032217 3300037466 Bacteria 5231
40 Ga0439436_0039920 3300041404 Bacteria 1346
41 Ga0439436_0061688 3300041404 Bacteria 1049
42 Ga0439439_0007174 3300041406 Bacteria 2599
43 Ga0439439_0018791 3300041406 Bacteria 1710
44 Ga0451835_0520271 3300041492 Bacteria 2066
45 Ga0451853_1796109 3300041512 Bacteria 2586
46 Ga0439433_0009648 3300041999 Bacteria 2106
47 Ga0439433_0037550 3300041999 Bacteria 1121
48 Ga0439442_011919 3300042002 Bacteria 1774
49 Ga0439448_0021207 3300042005 Bacteria 2013
50 Ga0439449_0001559 3300042007 Bacteria 8978
51 Ga0439455_0009769 3300042012 Bacteria 2091
52 Ga0439457_000318 3300042014 Bacteria 13298
53 Ga0439457_000804 3300042014 Bacteria 9362
54 Ga0439457_022786 3300042014 Bacteria 1386
55 Ga0439462_0010219 3300042015 Bacteria 2377
56 Ga0450894_000420 3300042131 Bacteria 7280
57 Ga0450896_000342 3300042133 Bacteria 4504
58 Ga0450899_000825 3300042135 Bacteria 3532
59 Ga0450903_000013 3300042138 Bacteria 34246
60 Ga0450906_001820 3300042145 Bacteria 4679
61 Ga0439458_0000878 3300042157 Bacteria 7781
62 Ga0450901_006501 3300042533 Bacteria 1203
63 Ga0466969_0025617 3300044656 Bacteria 3031
64 Ga0466972_0022678 3300044658 Bacteria 3124
65 Ga0466965_0001895 3300044683 Bacteria 8717
66 Ga0466965_0052041 3300044683 Bacteria 2033
67 Ga0466965_0060284 3300044683 Bacteria 1895
68 Ga0466966_0008675 3300044684 Bacteria 6728
69 Ga0466961_0004405 3300044693 Bacteria 8813
70 Ga0466961_0028376 3300044693 Bacteria 3598
71 Ga0466963_0002002 3300044694 Bacteria 11189
72 Ga0466963_0004113 3300044694 Bacteria 8416
73 Ga0466964_0017803 3300044706 Bacteria 2722
74 Ga0466971_0019330 3300044719 Bacteria 3024
75 Ga0466968_0021634 3300044735 Bacteria 2606
76 Ga0466970_0002888 3300044765 Bacteria 8318
77 Ga0466970_0006181 3300044765 Bacteria 5969
78 Ga0466957_0001142 3300044842 Bacteria 13758
79 Ga0466959_0003136 3300045049 Bacteria 10715
80 Ga0466959_0045238 3300045049 Bacteria 3242
81 Ga0466958_0002539 3300045836 Bacteria 9204
82 Ga0466967_0001492 3300045976 Bacteria 13655
83 Ga0466967_0041599 3300045976 Bacteria 3964
84 Ga0466967_0276361 3300045976 Bacteria 1611
85 Ga0495592_0048464 3300046454 Bacteria 3160
86 Ga0495603_0098301 3300046455 Bacteria 1709
87 Ga0495662_0086211 3300046476 Bacteria 1529
88 Ga0495585_0018606 3300046492 Bacteria 4006
89 Ga0495608_0178006 3300046511 Bacteria 1346
90 Ga0495618_0135389 3300046514 Bacteria 1576
91 Ga0495628_0100050 3300046516 Bacteria 2238
92 Ga0495628_0231324 3300046516 Bacteria 1385
93 Ga0495640_0081610 3300046533 Bacteria 2149
94 Ga0495640_0100834 3300046533 Bacteria 1895
95 Ga0495645_0035388 3300046543 Bacteria 3641
96 Ga0495634_0076687 3300046642 Bacteria 2194
97 Ga0495625_0046689 3300046660 Bacteria 3124
98 Ga0495635_0043265 3300046663 Bacteria 3108
99 Ga0495635_0136587 3300046663 Bacteria 1671
100 Ga0495588_0058490 3300046674 Bacteria 1993
101 Ga0495657_0062794 3300046675 Bacteria 2452
102 Ga0495657_0072785 3300046675 Bacteria 2240
103 Ga0495613_0046728 3300046689 Bacteria 3200
104 Ga0495613_0053057 3300046689 Bacteria 2984
105 Ga0495624_0028885 3300046690 Bacteria 3619
106 Ga0495600_0074282 3300046809 Bacteria 2220
107 Ga0495660_0194827 3300046810 Bacteria 971
108 Ga0495581_0083655 3300047315 Bacteria 1849
109 Ga0495676_0132677 3300047321 Bacteria 1795
110 Ga0495680_0141460 3300047322 Bacteria 1760
111 Ga0495680_0210416 3300047322 Bacteria 1392
112 Ga0495683_0144717 3300047323 Bacteria 1111
113 Ga0495687_032311 3300047443 Bacteria 2390
114 Ga0495675_0029760 3300047444 Bacteria 3483
115 Ga0495686_0023729 3300047472 Bacteria 4040
116 Ga0495593_0028831 3300047673 Bacteria 3047
117 Ga0496108_0093271 3300048911 Bacteria 2561
118 Ga0501033_0091469 3300049570 Bacteria 2225
119 Ga0501033_0116013 3300049570 Bacteria 1946
120 Ga0501034_0007756 3300049571 Bacteria 11412
121 Ga0501034_0078594 3300049571 Bacteria 3303
122 Ga0501034_0153901 3300049571 Bacteria 2274
123 Ga0501036_0050395 3300049572 Bacteria 3526
124 Ga0501036_0243393 3300049572 Bacteria 1508
125 Ga0501037_0016480 3300049573 Bacteria 5439
126 Ga0501037_0059342 3300049573 Bacteria 2791
127 Ga0501038_0005102 3300049574 Bacteria 12204
128 Ga0501039_0282350 3300049575 Bacteria 1305
129 Ga0501042_0105280 3300049578 Bacteria 2030
130 Ga0501043_0005911 3300049579 Bacteria 9843
131 Ga0501046_0006699 3300049580 Bacteria 10171
132 Ga0501047_0139288 3300049581 Bacteria 2305
133 Ga0501047_0164001 3300049581 Bacteria 2093
134 Ga0501047_0268485 3300049581 Bacteria 1552
135 Ga0501048_0024241 3300049582 Bacteria 4428
136 Ga0501070_0097486 3300049586 Bacteria 2432
137 Ga0501080_0049089 3300049742 Bacteria 3928
138 Ga0501035_0018529 3300049822 Bacteria 6413
139 Ga0501035_0050205 3300049822 Bacteria 3739
140 Ga0501035_0261677 3300049822 Bacteria 1466
141 Ga0501044_0172711 3300049823 Bacteria 2131
142 Ga0501044_0191064 3300049823 Bacteria 2010
143 nmdc:mga03n38_26965_c1 3300050490 Bacteria 2378
144 nmdc:mga06z11_2979_c1 3300050494 Bacteria 6518
145 nmdc:mga07m45_158877_c1 3300050496 Bacteria 1312
146 Ga0500600_0079155 3300053149 Bacteria 1782
147 Ga0466962_0000246 3300061719 Bacteria 22692
148 Ga0466962_0022103 3300061719 Bacteria 3056
149 Ga0466962_0022969 3300061719 Bacteria 2998
150 2547411347 2547132111 Bacteria 8013147
151 2585306325 2582581313 Bacteria 10042643
152 2616696746 2616644814 Bacteria 11555299
153 2643941963 2643221587 Bacteria 7586415
154 2644389586 2643221670 Bacteria 6497041
155 2644429046 2643221677 Bacteria 7584031
156 2644439374 2643221678 Bacteria 9540101
157 2644633252 2643221714 Bacteria 9015452
158 2784589780 2784132148 Bacteria 8627943
159 2785341835 2784746763 Bacteria 9783172
160 2785370814 2784746768 Bacteria 10036182
161 2786671998 2786546132 Bacteria 10419719
162 2808843375 2808606359 Bacteria 9866990
163 2808912957 2808606375 Bacteria 9466072
164 2809233450 2808606448 Bacteria 8656184
165 2811845067 2808606982 Bacteria 7791042
166 2812356669 2811994879 Bacteria 9313447
167 2812479382 2811994917 Bacteria 7761064
168 2852643113 2852635781 Bacteria 8251373
169 2862287045 2862281513 Bacteria 9621493
170 2862391306 2862382967 Bacteria 10317375
171 2863411522 2863404153 Bacteria 9672205
172 2867429948 2867428634 Bacteria 9590268
173 2867481095 2867475112 Bacteria 6909112
174 2873154663 2873151551 Bacteria 8625867
175 2877679764 2877676314 Bacteria 9512378
176 2912730745 2912723979 Bacteria 8557534
177 2918505864 2918501144 Bacteria 8668083
178 2935395244 2935390628 Bacteria 7043367
179 2946069202 2946064051 Bacteria 8957905
180 2946077149 2946072368 Bacteria 8999607
181 2947227726 2947224130 Bacteria 9938529
182 2954003158 2954002825 Bacteria 9173742
183 2954384694 2954380949 Bacteria 10050426
184 2954678270 2954673503 Bacteria 9685905
185 2954685887 2954682443 Bacteria 9862841
186 2954695538 2954691527 Bacteria 10720516
187 2954710732 2954701450 Bacteria 10834262
188 2954714961 2954711539 Bacteria 10867210
189 2954724903 2954721474 Bacteria 10456478
190 2954736915 2954731030 Bacteria 10243860
191 2954743830 2954740390 Bacteria 10229294
192 2954755763 2954749733 Bacteria 10366972
193 2954762782 2954759201 Bacteria 9358192
194 2990062347 2990059506 Bacteria 9321252
195 2990089223 2990088156 Bacteria 6657676
196 3006393823 3006393351 Bacteria 6615579
197 3006498864 3006493962 Bacteria 8825450
198 8008566591 8008558824 Bacteria 10610750
199 8008577770 8008574985 Bacteria 7815457
200 8023626973 8023623736 Bacteria 8593882
201 8025532288 8025530807 Bacteria 8495698
202 8033690347 8033684223 Bacteria 6906479
203 8047896938 8047893842 Bacteria 11723082
204 8048362014 8048356638 Bacteria 11044339
205 8048373923 8048369669 Bacteria 11666822
206 8048384304 8048379754 Bacteria 11877923
207 8048413801 8048406513 Bacteria 8936924
208 Ga0451853_3308924
209 JGI24739J22299_10008107
210 JGI24737J22298_10048950
211 rootH1_10019492
212 rootH1_10073337
213 JGI25160J50197_1007373
214 Ga0006562J51391_1055254
215 Ga0006562J51391_1055259
216 Ga0075367_10007772
217 Ga0075370_10066996
218 Ga0105251_10011373
219 Ga0105248_10127703
220 Ga0105246_10002569
221 Ga0105246_10297021
222 Ga0182008_10000155
223 Ga0182007_10000136
224 Ga0183367_1002
225 Ga0209758_1009776
226 Ga0207426_1044333
227 Ga0207647_10008740
228 Ga0207711_10304850
229 Ga0207639_10214097
230 Ga0307515_10040225
231 Ga0307515_10229420
232 Ga0307511_10059083
233 Ga0307512_10006420
234 Ga0307512_10039509
235 Ga0307513_10018680
236 Ga0307513_10083782
237 Ga0307509_10061269
238 Ga0307509_10192830
239 Ga0307508_10035928
240 Ga0307514_10001786
241 Ga0307514_10011273
242 Ga0307516_10002850
243 Ga0307518_10113156
244 Ga0307410_10476449
245 Ga0395900_0361569
246 Ga0395898_0032217
247 Ga0439436_0039920
248 Ga0439436_0061688
249 Ga0439439_0007174
250 Ga0439439_0018791
251 Ga0451835_0520271
252 Ga0451853_1796109
253 Ga0439433_0009648
254 Ga0439433_0037550
255 Ga0439442_011919
256 Ga0439448_0021207
257 Ga0439449_0001559
258 Ga0439455_0009769
259 Ga0439457_000318
260 Ga0439457_000804
261 Ga0439457_022786
262 Ga0439462_0010219
263 Ga0450894_000420
264 Ga0450896_000342
265 Ga0450899_000825
266 Ga0450903_000013
267 Ga0450906_001820
268 Ga0439458_0000878
269 Ga0450901_006501
270 Ga0466969_0025617
271 Ga0466972_0022678
272 Ga0466965_0001895
273 Ga0466965_0052041
274 Ga0466965_0060284
275 Ga0466966_0008675
276 Ga0466961_0004405
277 Ga0466961_0028376
278 Ga0466963_0002002
279 Ga0466963_0004113
280 Ga0466964_0017803
281 Ga0466971_0019330
282 Ga0466968_0021634
283 Ga0466970_0002888
284 Ga0466970_0006181
285 Ga0466957_0001142
286 Ga0466959_0003136
287 Ga0466959_0045238
288 Ga0466958_0002539
289 Ga0466967_0001492
290 Ga0466967_0041599
291 Ga0466967_0276361
292 Ga0495592_0048464
293 Ga0495603_0098301
294 Ga0495662_0086211
295 Ga0495585_0018606
296 Ga0495608_0178006
297 Ga0495618_0135389
298 Ga0495628_0100050
299 Ga0495628_0231324
300 Ga0495640_0081610
301 Ga0495640_0100834
302 Ga0495645_0035388
303 Ga0495634_0076687
304 Ga0495625_0046689
305 Ga0495635_0043265
306 Ga0495635_0136587
307 Ga0495588_0058490
308 Ga0495657_0062794
309 Ga0495657_0072785
310 Ga0495613_0046728
311 Ga0495613_0053057
312 Ga0495624_0028885
313 Ga0495600_0074282
314 Ga0495660_0194827
315 Ga0495581_0083655
316 Ga0495676_0132677
317 Ga0495680_0141460
318 Ga0495680_0210416
319 Ga0495683_0144717
320 Ga0495687_032311
321 Ga0495675_0029760
322 Ga0495686_0023729
323 Ga0495593_0028831
324 Ga0496108_0093271
325 Ga0501033_0091469
326 Ga0501033_0116013
327 Ga0501034_0007756
328 Ga0501034_0078594
329 Ga0501034_0153901
330 Ga0501036_0050395
331 Ga0501036_0243393
332 Ga0501037_0016480
333 Ga0501037_0059342
334 Ga0501038_0005102
335 Ga0501039_0282350
336 Ga0501042_0105280
337 Ga0501043_0005911
338 Ga0501046_0006699
339 Ga0501047_0139288
340 Ga0501047_0164001
341 Ga0501047_0268485
342 Ga0501048_0024241
343 Ga0501070_0097486
344 Ga0501080_0049089
345 Ga0501035_0018529
346 Ga0501035_0050205
347 Ga0501035_0261677
348 Ga0501044_0172711
349 Ga0501044_0191064
350 nmdc:mga03n38_26965_c1
351 nmdc:mga06z11_2979_c1
352 nmdc:mga07m45_158877_c1
353 Ga0500600_0079155
354 Ga0466962_0000246
355 Ga0466962_0022103
356 Ga0466962_0022969
357 2547411347
358 2585306325
359 2616696746
360 2643941963
361 2644389586
362 2644429046
363 2644439374
364 2644633252
365 2784589780
366 2785341835
367 2785370814
368 2786671998
369 2808843375
370 2808912957
371 2809233450
372 2811845067
373 2812356669
374 2812479382
375 2852643113
376 2862287045
377 2862391306
378 2863411522
379 2867429948
380 2867481095
381 2873154663
382 2877679764
383 2912730745
384 2918505864
385 2935395244
386 2946069202
387 2946077149
388 2947227726
389 2954003158
390 2954384694
391 2954678270
392 2954685887
393 2954695538
394 2954710732
395 2954714961
396 2954724903
397 2954736915
398 2954743830
399 2954755763
400 2954762782
401 2990062347
402 2990089223
403 3006393823
404 3006498864
405 8008566591
406 8008577770
407 8023626973
408 8025532288
409 8033690347
410 8047896938
411 8048362014
412 8048373923
413 8048384304
414 8048413801

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04087

DUF389

Domain of unknown function (DUF389)

133

265

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5drk-assembly1.cif.gz_C 2.3 angstrom structure of cpii, a nitrogen regulatory pii-like protein from thiomonas intermedia k12, bound to adp, amp and bicarbonate. 0.8401 2 79
5d4l-assembly2.cif.gz_B structure of the apo form of cpii from thiomonas intermedia k12, a nitrogen regulatory pii-like protein 0.8041 2 76
5d4o-assembly1.cif.gz_B structure of cpii, a nitrogen regulatory pii-like protein from thiomonas intermedia k12, bound to adp, amp and bicarbonate. 0.7972 2 81
2cz4-assembly1.cif.gz_C crystal structure of a putative pii-like signaling protein (ttha0516) from thermus thermophilus hb8 0.785 2 76
1vfj-assembly1.cif.gz_B crystal structure of tt1020 from thermus thermophilus hb8 0.7839 1 83
ID Description Score Start End Superfamily
af_A0A1D6KLF6_196_267_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8243 3 72 3.30.70.240
af_A0A0R0KAP7_457_568_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8117 2 76 3.30.70.240
af_A0A0R0J2P3_24_128_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8087 2 91 3.30.70.120
af_Q4DZ91_511_627_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8066 2 75 3.30.70.240
af_P9WK97_418_527_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7762 2 74 3.30.70.240
ID Description Score Start End GO Terms
AF-A0A6G3WNJ5-F1-model_v4 DUF389 domain-containing protein 0.984 125 308 GO:0016020
AF-A0A559WC44-F1-model_v4 deleted 0.9793 100 312
AF-Q53581-F1-model_v4 DUF389 domain-containing protein 0.9715 113 309 GO:0016020
AF-A0A2G4FGX4-F1-model_v4 Uncharacterized protein 0.9703 1 82
AF-A0A7V9WMA1-F1-model_v4 DUF389 domain-containing protein 0.9656 114 311 GO:0016020

Map