F316407

General Info

Members Datasets Scaffolds Average Seq Length
207 145 198 679

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10055638|Ga0114129_100556381
Length 722
Sequence MRAHVACLAHAKQCLFDNRSAYAAWRERLRILARGEAGTERGACRKHLRGQNLSIVDAGEDLRGPPNTQPEAAAPLLEVDDLHTQFTTTRGIVRAVEGVGSGKSVTALSIMRLLPRLTAKIPQGRIFFDGQSLLDLDDEQMRKIRGRGISMIFQEPMTSLNPILTIGLQIKEPLQIHLRMTEEQATARAIELLQLVGITDPERRLDQYPHQFSGGMRQRVMIAIGLACNPKLIIADEPTTALDVTIQAQILELMKNLSRRLNIALIIITHNLGVVARYADRVIVMYAARVAEQGAADAVFHRPRHPYTMGLLRSVPRLDRPRGSKLETIEGLPPDPGNVSAGCRFAPRCPYRIPVCDQEPPLFPTDTGGLSRCHRHQEIAAGKISWAAAGGTGLNFAANTAAPVLSVRNLTKYFSVSGGLRGAAGTVRAVQDVSFDIYPGETLGLVGESGCGKTTIGRLILRLEEPTAGEIHFEGVNLSTASPSQLKAMRRKVQVIFQDPYSSLNPRMTVGQIIGEPLQVYRIVDGSKQVGARVCELLENVGLRREMAERYPHQLSGGQRQRVGIARALAMEPSFIVCDEAVSALDVSIQGQIINLLEDLQRKFQLAYLFIAHDLAVVRYISARVVVMYFGRVMEVADRDTIYKDPLHPYTKVLLDAAPVPDPTVEKEREPRLIKGELPSHLTPPTGCVFNTRCPLASQECHEVVPKLEEKKPGHYAACIKV

Samples

Sample ID Description Type Environment
1 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
2 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
3 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
4 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
5 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
6 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
7 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
8 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
9 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
60 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
90 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
91 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
92 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
93 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
94 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
102 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
103 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
122 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
123 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
124 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
125 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
126 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
127 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
130 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
131 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
132 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
133 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
134 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
135 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
140 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
145 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.65
Metatranscriptomes 0
Isolates 4.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.14
Nodule 0
Rhizoplane 5.31
Rhizosphere 80.68
Stem 0
Stem Tuber 0
Unclassified 3.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000547 3300003187 Bacteria 34450
2 Ga0070670_100037367 3300005331 Bacteria 4178
3 Ga0068869_100036790 3300005334 Bacteria 3477
4 Ga0070680_100002131 3300005336 Bacteria 14630
5 Ga0070668_100023968 3300005347 Bacteria 4621
6 Ga0070674_100011936 3300005356 Bacteria 5312
7 Ga0070674_100023157 3300005356 Bacteria 4015
8 Ga0070701_10005578 3300005438 Bacteria 5211
9 Ga0070700_100004983 3300005441 Bacteria 6994
10 Ga0070700_100011143 3300005441 Bacteria 4975
11 Ga0070700_100056115 3300005441 Bacteria 2468
12 Ga0070694_100000181 3300005444 Bacteria 32956
13 Ga0070662_100005909 3300005457 Bacteria 7852
14 Ga0070681_10012403 3300005458 Bacteria 8453
15 Ga0070685_10013808 3300005466 Bacteria 4269
16 Ga0070706_100016673 3300005467 Bacteria 6785
17 Ga0070698_100043389 3300005471 Bacteria 4611
18 Ga0070699_100002292 3300005518 Bacteria 17217
19 Ga0068853_100066304 3300005539 Bacteria 3135
20 Ga0070672_100040286 3300005543 Bacteria 3583
21 Ga0070695_100000469 3300005545 Bacteria 20922
22 Ga0070696_100004160 3300005546 Bacteria 9637
23 Ga0070696_100005258 3300005546 Bacteria 8638
24 Ga0068859_100026830 3300005617 Bacteria 5778
25 Ga0068864_100033989 3300005618 Bacteria 4335
26 Ga0068863_100135658 3300005841 Bacteria 2351
27 Ga0068858_100026009 3300005842 Bacteria 5443
28 Ga0068860_100002761 3300005843 Bacteria 18272
29 Ga0068862_100001531 3300005844 Bacteria 21154
30 Ga0081455_10000078 3300005937 Bacteria 105058
31 Ga0081455_10001514 3300005937 Bacteria 28648
32 Ga0081455_10005686 3300005937 Bacteria 13604
33 Ga0081538_10009531 3300005981 Bacteria 8086
34 Ga0081540_1000202 3300005983 Bacteria 62303
35 Ga0081539_10008847 3300005985 Bacteria 8610
36 Ga0081539_10041584 3300005985 Bacteria 2685
37 Ga0075368_10011204 3300006042 Bacteria 3258
38 Ga0075363_100002119 3300006048 Bacteria 7962
39 Ga0075364_10019509 3300006051 Bacteria 4257
40 Ga0075362_10004554 3300006177 Bacteria 4993
41 Ga0075367_10023297 3300006178 Bacteria 3482
42 Ga0075367_10028772 3300006178 Bacteria 3173
43 Ga0075367_10030135 3300006178 Bacteria 3108
44 Ga0075428_100003993 3300006844 Bacteria 16190
45 Ga0075428_100046763 3300006844 Bacteria 4753
46 Ga0075428_100092284 3300006844 Bacteria 3301
47 Ga0075430_100034934 3300006846 Bacteria 4268
48 Ga0075430_100061303 3300006846 Bacteria 3161
49 Ga0075431_100000392 3300006847 Bacteria 35161
50 Ga0075431_100000786 3300006847 Bacteria 27678
51 Ga0075431_100000970 3300006847 Bacteria 25471
52 Ga0075431_100002326 3300006847 Bacteria 18259
53 Ga0075431_100056428 3300006847 Bacteria 4051
54 Ga0075431_100092937 3300006847 Bacteria 3113
55 Ga0075431_100096445 3300006847 Bacteria 3053
56 Ga0075434_100001209 3300006871 Bacteria 21447
57 Ga0075434_100004584 3300006871 Bacteria 12478
58 Ga0075429_100021968 3300006880 Bacteria 5533
59 Ga0075429_100041140 3300006880 Bacteria 4025
60 Ga0068865_100019788 3300006881 Bacteria 4359
61 Ga0097620_100026830 3300006931 Bacteria 5778
62 Ga0111539_10000292 3300009094 Bacteria 60528
63 Ga0111539_10024407 3300009094 Bacteria 7420
64 Ga0105245_10043079 3300009098 Bacteria 4027
65 Ga0114129_10000098 3300009147 Bacteria 84407
66 Ga0114129_10002136 3300009147 Bacteria 27261
67 Ga0114129_10014997 3300009147 Bacteria 11034
68 Ga0114129_10055638 3300009147 Bacteria 5544
69 Ga0105238_10038008 3300009551 Bacteria 4891
70 Ga0105249_10007631 3300009553 Bacteria 9434
71 Ga0163162_10089161 3300013306 Bacteria 3165
72 Ga0157375_10042718 3300013308 Bacteria 4390
73 Ga0157380_10022800 3300014326 Bacteria 4721
74 Ga0157376_10032006 3300014969 Bacteria 4218
75 Ga0209130_1000428 3300025284 Bacteria 45112
76 Ga0209025_1000084 3300025294 Bacteria 263812
77 Ga0209758_1004209 3300025297 Bacteria 12191
78 Ga0207426_1000314 3300025302 Bacteria 94920
79 Ga0207653_10000374 3300025885 Bacteria 20974
80 Ga0207682_10002088 3300025893 Bacteria 9046
81 Ga0207684_10008842 3300025910 Bacteria 8940
82 Ga0207684_10015208 3300025910 Bacteria 6628
83 Ga0207707_10084204 3300025912 Bacteria 2777
84 Ga0207660_10009983 3300025917 Bacteria 6150
85 Ga0207662_10023865 3300025918 Bacteria 3516
86 Ga0207646_10021557 3300025922 Bacteria 5952
87 Ga0207687_10027078 3300025927 Bacteria 3844
88 Ga0207669_10026132 3300025937 Bacteria 3170
89 Ga0207691_10027223 3300025940 Bacteria 5363
90 Ga0207689_10001489 3300025942 Bacteria 22371
91 Ga0207689_10049206 3300025942 Bacteria 3477
92 Ga0207679_10009179 3300025945 Bacteria 6324
93 Ga0207639_10028123 3300026041 Bacteria 4102
94 Ga0207708_10002409 3300026075 Bacteria 13725
95 Ga0207708_10043784 3300026075 Bacteria 3412
96 Ga0207708_10044951 3300026075 Bacteria 3365
97 Ga0207676_10006577 3300026095 Bacteria 8218
98 Ga0207674_10041044 3300026116 Bacteria 4788
99 Ga0207675_100007728 3300026118 Bacteria 10146
100 Ga0207675_100050285 3300026118 Bacteria 3889
101 Ga0207683_10000765 3300026121 Bacteria 29217
102 Ga0207683_10019225 3300026121 Bacteria 5832
103 Ga0209966_1001859 3300027695 Bacteria 3567
104 Ga0209998_10002989 3300027717 Bacteria 3764
105 Ga0209813_10000690 3300027866 Bacteria 7701
106 Ga0207428_10004102 3300027907 Bacteria 13955
107 Ga0207428_10020711 3300027907 Bacteria 5579
108 Ga0207428_10045869 3300027907 Bacteria 3517
109 Ga0268265_10003608 3300028380 Bacteria 11049
110 Ga0268265_10013811 3300028380 Bacteria 5496
111 Ga0268264_10001467 3300028381 Bacteria 22033
112 Ga0265320_10008290 3300031240 Bacteria 6365
113 Ga0265331_10032079 3300031250 Bacteria 2605
114 Ga0316575_10000029 3300031665 Bacteria 35444
115 Ga0265342_10019526 3300031712 Bacteria 4365
116 Ga0373939_0004129 3300035114 Bacteria 3421
117 Ga0373931_0002256 3300035691 Bacteria 8515
118 Ga0373931_0011400 3300035691 Bacteria 4295
119 Ga0373927_0000143 3300035695 Bacteria 55752
120 Ga0316582_0021993 3300036647 Bacteria 3778
121 Ga0373925_0000015 3300037068 Bacteria 178076
122 Ga0395898_0046199 3300037466 Bacteria 4277
123 Ga0316581_0012663 3300037588 Bacteria 2378
124 Ga0436365_1428872 3300039437 Bacteria 13961
125 Ga0439453_0000108 3300041408 Bacteria 6726
126 Ga0453684_0006104 3300044712 Bacteria 23233
127 Ga0495638_0031923 3300046460 Bacteria 3381
128 Ga0495648_0000426 3300046524 Bacteria 46243
129 Ga0495672_0064272 3300047320 Bacteria 2102
130 Ga0496102_0007410 3300048905 Bacteria 9368
131 Ga0496104_0001502 3300048907 Bacteria 20115
132 Ga0496104_0002045 3300048907 Bacteria 17515
133 Ga0496106_0004430 3300048909 Bacteria 10405
134 Ga0496108_0043356 3300048911 Bacteria 3758
135 Ga0496109_0007015 3300048912 Bacteria 9505
136 Ga0496110_0000401 3300048913 Bacteria 29358
137 Ga0496111_0029561 3300048914 Bacteria 3893
138 Ga0496112_0122758 3300048915 Bacteria 2568
139 Ga0496112_0123205 3300048915 Bacteria 2563
140 Ga0496114_0106247 3300048917 Bacteria 2402
141 Ga0501034_0119402 3300049571 Bacteria 2623
142 Ga0501036_0027800 3300049572 Bacteria 4781
143 Ga0501038_0011014 3300049574 Bacteria 8257
144 Ga0501042_0017633 3300049578 Bacteria 4928
145 Ga0501043_0000038 3300049579 Bacteria 128656
146 Ga0501046_0000049 3300049580 Bacteria 135088
147 Ga0501047_0000039 3300049581 Bacteria 187849
148 Ga0501047_0007406 3300049581 Bacteria 10325
149 Ga0501048_0000035 3300049582 Bacteria 64516
150 Ga0501073_0012582 3300049589 Bacteria 6173
151 Ga0501073_0037547 3300049589 Bacteria 3439
152 Ga0501073_0073131 3300049589 Bacteria 2387
153 Ga0501076_0032037 3300049592 Bacteria 4102
154 Ga0501077_0001168 3300049593 Bacteria 15863
155 Ga0501077_0017419 3300049593 Bacteria 4534
156 Ga0501077_0052607 3300049593 Bacteria 2586
157 Ga0501079_0002942 3300049741 Bacteria 12449
158 Ga0501079_0026444 3300049741 Bacteria 4449
159 Ga0501080_0011520 3300049742 Bacteria 8097
160 Ga0501081_0022916 3300049743 Bacteria 4182
161 Ga0501081_0028196 3300049743 Bacteria 3788
162 Ga0501081_0076197 3300049743 Bacteria 2342
163 Ga0501083_0049898 3300049744 Bacteria 2819
164 Ga0501045_0040460 3300049824 Bacteria 3392
165 nmdc:mga00v17_3987_c1 3300050491 Bacteria 7619
166 nmdc:mga0yw44_37772_c1 3300050492 Bacteria 2853
167 nmdc:mga06z11_6763_c1 3300050494 Bacteria 4685
168 nmdc:mga05p37_15529_c1 3300050507 Bacteria 9153
169 nmdc:mga05p37_27151_c1 3300050507 Bacteria 6969
170 nmdc:mga05p37_46_c1 3300050507 Bacteria 105665
171 nmdc:mga05p37_97607_c1 3300050507 Bacteria 3619
172 nmdc:mga09592_38127_c1 3300050508 Bacteria 4033
173 nmdc:mga0qj67_14_c1 3300050509 Bacteria 124768
174 nmdc:mga0qj67_22511_c1 3300050509 Bacteria 4841
175 nmdc:mga0qj67_36043_c1 3300050509 Bacteria 3869
176 nmdc:mga06r32_30738_c1 3300050510 Bacteria 5040
177 nmdc:mga06r32_72837_c1 3300050510 Bacteria 3326
178 nmdc:mga06r32_73_c1 3300050510 Bacteria 65778
179 nmdc:mga06r32_976_c1 3300050510 Bacteria 25615
180 nmdc:mga08y16_75910_c1 3300050511 Bacteria 3503
181 nmdc:mga08y16_816_c1 3300050511 Bacteria 29825
182 nmdc:mga0n895_10102_c1 3300050512 Bacteria 8311
183 nmdc:mga0n895_5128_c1 3300050512 Bacteria 10887
184 nmdc:mga0n895_7618_c1 3300050512 Bacteria 9308
185 nmdc:mga0a205_22932_c1 3300050515 Bacteria 5919
186 nmdc:mga0a205_3620_c1 3300050515 Bacteria 13829
187 Ga0500641_0006039 3300053096 Bacteria 4288
188 Ga0500604_0020312 3300053151 Bacteria 1868
189 Ga0500616_0023630 3300053153 Bacteria 3421
190 Ga0500616_0037037 3300053153 Bacteria 2643
191 Ga0500616_0042840 3300053153 Bacteria 2422
192 Ga0501084_0065015 3300054114 Bacteria 3052
193 Ga0501082_0000016 3300060353 Bacteria 115081
194 Ga0501082_0077042 3300060353 Bacteria 2875
195 Ga0501082_0103631 3300060353 Bacteria 2461
196 Ga0530510_0004161 3300061734 Bacteria 9983
197 Ga0530510_0013352 3300061734 Bacteria 5774
198 Ga0530510_0017104 3300061734 Bacteria 5136

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053151 Ga0500604_0020312 Ga0500604_0020312_23_1744 488
2 3300047320 Ga0495672_0064272 Ga0495672_0064272_372_2087 494
3 3300050510 nmdc:mga06r32_72837_c1 nmdc:mga06r32_72837_c1_17_1855 523
4 3300060353 Ga0501082_0103631 Ga0501082_0103631_496_2415 530
5 3300061734 Ga0530510_0013352 Ga0530510_0013352_16_1851 533
6 3300025910 Ga0207684_10015208 Ga0207684_100152086 534
7 iso_pu_bacteria 2870801768 2870803634 544
8 iso_pu_bacteria 2870804320 2870805587 544
9 3300060353 Ga0501082_0077042 Ga0501082_0077042_530_2491 548
10 3300049743 Ga0501081_0076197 Ga0501081_0076197_380_2284 553
11 iso_pu_bacteria 3006978542 3006981265 558
12 3300027695 Ga0209966_1001859 Ga0209966_10018592 561
13 iso_pu_bacteria 2818991451 2819629049 563
14 3300026118 Ga0207675_100007728 Ga0207675_1000077282 564
15 iso_pu_bacteria 2915606848 2915608962 564
16 3300027717 Ga0209998_10002989 Ga0209998_100029891 565
17 3300005985 Ga0081539_10041584 Ga0081539_100415842 570
18 3300009147 Ga0114129_10055638 Ga0114129_100556381 574
19 3300049578 Ga0501042_0017633 Ga0501042_0017633_2858_4897 574
20 3300050511 nmdc:mga08y16_75910_c1 nmdc:mga08y16_75910_c1_818_2896 574
21 3300025284 Ga0209130_1000428 Ga0209130_100042811 575
22 3300025302 Ga0207426_1000314 Ga0207426_100031455 575
23 3300053153 Ga0500616_0042840 Ga0500616_0042840_268_2328 575
24 3300005546 Ga0070696_100005258 Ga0070696_1000052587 576
25 3300031665 Ga0316575_10000029 Ga0316575_1000002924 576
26 3300005937 Ga0081455_10005686 Ga0081455_100056863 579
27 3300025910 Ga0207684_10008842 Ga0207684_100088427 579
28 3300050507 nmdc:mga05p37_97607_c1 nmdc:mga05p37_97607_c1_1190_3229 579
29 3300061734 Ga0530510_0004161 Ga0530510_0004161_5226_7367 579
30 3300005356 Ga0070674_100011936 Ga0070674_1000119362 580
31 3300005441 Ga0070700_100004983 Ga0070700_1000049834 580
32 3300005618 Ga0068864_100033989 Ga0068864_1000339892 580
33 3300005842 Ga0068858_100026009 Ga0068858_1000260092 580
34 3300006881 Ga0068865_100019788 Ga0068865_1000197882 580
35 3300009147 Ga0114129_10014997 Ga0114129_1001499710 580
36 3300013308 Ga0157375_10042718 Ga0157375_100427182 580
37 3300014326 Ga0157380_10022800 Ga0157380_100228003 580
38 3300014969 Ga0157376_10032006 Ga0157376_100320063 580
39 3300025937 Ga0207669_10026132 Ga0207669_100261323 580
40 3300025942 Ga0207689_10001489 Ga0207689_100014893 580
41 3300026075 Ga0207708_10044951 Ga0207708_100449512 580
42 3300026121 Ga0207683_10019225 Ga0207683_100192252 580
43 3300050507 nmdc:mga05p37_27151_c1 nmdc:mga05p37_27151_c1_377_2416 580
44 3300006177 Ga0075362_10004554 Ga0075362_100045542 581
45 3300006846 Ga0075430_100034934 Ga0075430_1000349343 582
46 3300006880 Ga0075429_100021968 Ga0075429_1000219682 582
47 3300009147 Ga0114129_10002136 Ga0114129_1000213623 582
48 3300050507 nmdc:mga05p37_15529_c1 nmdc:mga05p37_15529_c1_7059_9059 582
49 3300050510 nmdc:mga06r32_30738_c1 nmdc:mga06r32_30738_c1_1118_3169 582
50 3300006847 Ga0075431_100092937 Ga0075431_1000929372 583
51 3300036647 Ga0316582_0021993 Ga0316582_0021993_49_2061 583
52 3300037588 Ga0316581_0012663 Ga0316581_0012663_18_2030 583
53 3300049579 Ga0501043_0000038 Ga0501043_0000038_95849_97909 583
54 3300049580 Ga0501046_0000049 Ga0501046_0000049_30771_32831 583
55 3300049581 Ga0501047_0000039 Ga0501047_0000039_155042_157102 583
56 3300049582 Ga0501048_0000035 Ga0501048_0000035_25164_27224 583
57 3300049593 Ga0501077_0052607 Ga0501077_0052607_170_2158 583
58 3300035695 Ga0373927_0000143 Ga0373927_0000143_8156_10228 584
59 3300037068 Ga0373925_0000015 Ga0373925_0000015_162498_164570 584
60 3300037466 Ga0395898_0046199 Ga0395898_0046199_976_3030 584
61 3300039437 Ga0436365_1428872 Ga0436365_1428872_1882_3891 584
62 3300050491 nmdc:mga00v17_3987_c1 nmdc:mga00v17_3987_c1_2289_4298 584
63 3300050494 nmdc:mga06z11_6763_c1 nmdc:mga06z11_6763_c1_2064_4073 584
64 3300050512 nmdc:mga0n895_5128_c1 nmdc:mga0n895_5128_c1_3043_5028 584
65 3300060353 Ga0501082_0000016 Ga0501082_0000016_65530_67536 584
66 3300006844 Ga0075428_100046763 Ga0075428_1000467634 585
67 3300006847 Ga0075431_100000786 Ga0075431_10000078613 585
68 3300006847 Ga0075431_100000970 Ga0075431_10000097010 585
69 3300006880 Ga0075429_100041140 Ga0075429_1000411402 585
70 3300035691 Ga0373931_0002256 Ga0373931_0002256_2383_4383 585
71 3300044712 Ga0453684_0006104 Ga0453684_0006104_4849_6912 585
72 3300050508 nmdc:mga09592_38127_c1 nmdc:mga09592_38127_c1_1518_3590 585
73 3300005539 Ga0068853_100066304 Ga0068853_1000663042 586
74 3300005841 Ga0068863_100135658 Ga0068863_1001356581 586
75 3300009551 Ga0105238_10038008 Ga0105238_100380082 586
76 3300026041 Ga0207639_10028123 Ga0207639_100281233 586
77 3300031240 Ga0265320_10008290 Ga0265320_100082904 586
78 3300031250 Ga0265331_10032079 Ga0265331_100320792 586
79 3300031712 Ga0265342_10019526 Ga0265342_100195263 586
80 3300006847 Ga0075431_100056428 Ga0075431_1000564282 587
81 3300049572 Ga0501036_0027800 Ga0501036_0027800_1123_3264 587
82 3300049743 Ga0501081_0028196 Ga0501081_0028196_797_2938 587
83 3300049824 Ga0501045_0040460 Ga0501045_0040460_603_2744 587
84 3300050515 nmdc:mga0a205_22932_c1 nmdc:mga0a205_22932_c1_220_2256 587
85 iso_pu_bacteria 2821443989 2821447488 587
86 iso_pu_bacteria 2844533157 2844533721 588
87 3300005331 Ga0070670_100037367 Ga0070670_1000373672 589
88 3300005356 Ga0070674_100023157 Ga0070674_1000231572 589
89 3300005466 Ga0070685_10013808 Ga0070685_100138082 589
90 3300005543 Ga0070672_100040286 Ga0070672_1000402862 589
91 3300005981 Ga0081538_10009531 Ga0081538_100095311 589
92 3300005985 Ga0081539_10008847 Ga0081539_100088472 589
93 3300006846 Ga0075430_100061303 Ga0075430_1000613032 589
94 3300006847 Ga0075431_100002326 Ga0075431_10000232615 589
95 3300009094 Ga0111539_10000292 Ga0111539_1000029240 589
96 3300009147 Ga0114129_10000098 Ga0114129_1000009852 589
97 3300025893 Ga0207682_10002088 Ga0207682_100020884 589
98 3300025918 Ga0207662_10023865 Ga0207662_100238652 589
99 3300025940 Ga0207691_10027223 Ga0207691_100272233 589
100 3300026116 Ga0207674_10041044 Ga0207674_100410442 589
101 3300026118 Ga0207675_100050285 Ga0207675_1000502852 589
102 3300026121 Ga0207683_10000765 Ga0207683_1000076512 589
103 3300027907 Ga0207428_10004102 Ga0207428_100041026 589
104 3300050507 nmdc:mga05p37_46_c1 nmdc:mga05p37_46_c1_54913_56931 589
105 3300050509 nmdc:mga0qj67_36043_c1 nmdc:mga0qj67_36043_c1_910_2928 589
106 3300050510 nmdc:mga06r32_73_c1 nmdc:mga06r32_73_c1_15037_17055 589
107 3300050511 nmdc:mga08y16_816_c1 nmdc:mga08y16_816_c1_21782_23800 589
108 3300005347 Ga0070668_100023968 Ga0070668_1000239682 590
109 3300005457 Ga0070662_100005909 Ga0070662_1000059095 590
110 3300005471 Ga0070698_100043389 Ga0070698_1000433893 590
111 3300005937 Ga0081455_10001514 Ga0081455_1000151420 590
112 3300006042 Ga0075368_10011204 Ga0075368_100112042 590
113 3300006048 Ga0075363_100002119 Ga0075363_1000021195 590
114 3300006051 Ga0075364_10019509 Ga0075364_100195092 590
115 3300006178 Ga0075367_10023297 Ga0075367_100232972 590
116 3300006178 Ga0075367_10028772 Ga0075367_100287722 590
117 3300006178 Ga0075367_10030135 Ga0075367_100301352 590
118 3300006844 Ga0075428_100003993 Ga0075428_1000039934 590
119 3300006844 Ga0075428_100092284 Ga0075428_1000922842 590
120 3300009098 Ga0105245_10043079 Ga0105245_100430792 590
121 3300025922 Ga0207646_10021557 Ga0207646_100215573 590
122 3300025927 Ga0207687_10027078 Ga0207687_100270782 590
123 3300025945 Ga0207679_10009179 Ga0207679_100091794 590
124 3300027866 Ga0209813_10000690 Ga0209813_100006902 590
125 3300027907 Ga0207428_10045869 Ga0207428_100458692 590
126 3300028380 Ga0268265_10013811 Ga0268265_100138111 590
127 3300041408 Ga0439453_0000108 Ga0439453_0000108_1613_3670 590
128 3300046460 Ga0495638_0031923 Ga0495638_0031923_547_2604 590
129 3300046524 Ga0495648_0000426 Ga0495648_0000426_1422_3461 590
130 3300048907 Ga0496104_0001502 Ga0496104_0001502_17777_19855 590
131 3300048907 Ga0496104_0002045 Ga0496104_0002045_7498_9570 590
132 3300048911 Ga0496108_0043356 Ga0496108_0043356_115_2187 590
133 3300048912 Ga0496109_0007015 Ga0496109_0007015_5173_7245 590
134 3300048913 Ga0496110_0000401 Ga0496110_0000401_1862_3934 590
135 3300048914 Ga0496111_0029561 Ga0496111_0029561_700_2772 590
136 3300048915 Ga0496112_0122758 Ga0496112_0122758_259_2337 590
137 3300048915 Ga0496112_0123205 Ga0496112_0123205_365_2437 590
138 3300048917 Ga0496114_0106247 Ga0496114_0106247_125_2203 590
139 3300049574 Ga0501038_0011014 Ga0501038_0011014_2327_4378 590
140 3300049581 Ga0501047_0007406 Ga0501047_0007406_1081_3132 590
141 3300049589 Ga0501073_0012582 Ga0501073_0012582_540_2591 590
142 3300049589 Ga0501073_0037547 Ga0501073_0037547_1113_3161 590
143 3300049589 Ga0501073_0073131 Ga0501073_0073131_112_2157 590
144 3300049592 Ga0501076_0032037 Ga0501076_0032037_1659_3737 590
145 3300049593 Ga0501077_0001168 Ga0501077_0001168_11716_13770 590
146 3300049593 Ga0501077_0017419 Ga0501077_0017419_2060_4138 590
147 3300049741 Ga0501079_0002942 Ga0501079_0002942_6812_8866 590
148 3300049742 Ga0501080_0011520 Ga0501080_0011520_4011_6062 590
149 3300049743 Ga0501081_0022916 Ga0501081_0022916_1621_3699 590
150 3300049744 Ga0501083_0049898 Ga0501083_0049898_52_2130 590
151 3300050509 nmdc:mga0qj67_22511_c1 nmdc:mga0qj67_22511_c1_435_2510 590
152 3300053096 Ga0500641_0006039 Ga0500641_0006039_546_2606 590
153 3300053153 Ga0500616_0023630 Ga0500616_0023630_970_3090 590
154 3300053153 Ga0500616_0037037 Ga0500616_0037037_333_2387 590
155 3300005334 Ga0068869_100036790 Ga0068869_1000367901 591
156 3300005336 Ga0070680_100002131 Ga0070680_1000021315 591
157 3300005438 Ga0070701_10005578 Ga0070701_100055781 591
158 3300005441 Ga0070700_100011143 Ga0070700_1000111433 591
159 3300005441 Ga0070700_100056115 Ga0070700_1000561152 591
160 3300005444 Ga0070694_100000181 Ga0070694_10000018136 591
161 3300005458 Ga0070681_10012403 Ga0070681_100124033 591
162 3300005467 Ga0070706_100016673 Ga0070706_1000166735 591
163 3300005518 Ga0070699_100002292 Ga0070699_1000022925 591
164 3300005545 Ga0070695_100000469 Ga0070695_10000046916 591
165 3300005546 Ga0070696_100004160 Ga0070696_1000041607 591
166 3300005617 Ga0068859_100026830 Ga0068859_1000268303 591
167 3300005843 Ga0068860_100002761 Ga0068860_1000027614 591
168 3300005844 Ga0068862_100001531 Ga0068862_10000153121 591
169 3300005937 Ga0081455_10000078 Ga0081455_1000007871 591
170 3300005983 Ga0081540_1000202 Ga0081540_100020230 591
171 3300006847 Ga0075431_100000392 Ga0075431_10000039220 591
172 3300006847 Ga0075431_100096445 Ga0075431_1000964452 591
173 3300006871 Ga0075434_100001209 Ga0075434_10000120920 591
174 3300006871 Ga0075434_100004584 Ga0075434_10000458411 591
175 3300006931 Ga0097620_100026830 Ga0097620_1000268304 591
176 3300009094 Ga0111539_10024407 Ga0111539_100244075 591
177 3300009553 Ga0105249_10007631 Ga0105249_100076317 591
178 3300013306 Ga0163162_10089161 Ga0163162_100891612 591
179 3300025885 Ga0207653_10000374 Ga0207653_1000037415 591
180 3300025912 Ga0207707_10084204 Ga0207707_100842041 591
181 3300025917 Ga0207660_10009983 Ga0207660_100099832 591
182 3300025942 Ga0207689_10049206 Ga0207689_100492061 591
183 3300026075 Ga0207708_10002409 Ga0207708_1000240911 591
184 3300026075 Ga0207708_10043784 Ga0207708_100437841 591
185 3300026095 Ga0207676_10006577 Ga0207676_100065772 591
186 3300027907 Ga0207428_10020711 Ga0207428_100207114 591
187 3300028380 Ga0268265_10003608 Ga0268265_100036083 591
188 3300028381 Ga0268264_10001467 Ga0268264_1000146713 591
189 3300035114 Ga0373939_0004129 Ga0373939_0004129_736_2814 591
190 3300035691 Ga0373931_0011400 Ga0373931_0011400_1457_3535 591
191 3300048905 Ga0496102_0007410 Ga0496102_0007410_1676_3751 591
192 3300048909 Ga0496106_0004430 Ga0496106_0004430_6976_9051 591
193 3300049571 Ga0501034_0119402 Ga0501034_0119402_331_2409 591
194 3300049741 Ga0501079_0026444 Ga0501079_0026444_23_2113 591
195 3300050492 nmdc:mga0yw44_37772_c1 nmdc:mga0yw44_37772_c1_634_2709 591
196 3300050509 nmdc:mga0qj67_14_c1 nmdc:mga0qj67_14_c1_53580_55646 591
197 3300050510 nmdc:mga06r32_976_c1 nmdc:mga06r32_976_c1_19847_21916 591
198 3300050512 nmdc:mga0n895_10102_c1 nmdc:mga0n895_10102_c1_2105_4183 591
199 3300050512 nmdc:mga0n895_7618_c1 nmdc:mga0n895_7618_c1_799_2877 591
200 3300050515 nmdc:mga0a205_3620_c1 nmdc:mga0a205_3620_c1_5561_7639 591
201 3300054114 Ga0501084_0065015 Ga0501084_0065015_501_2567 591
202 3300061734 Ga0530510_0017104 Ga0530510_0017104_2215_4299 591
203 iso_pu_bacteria 2929199973 2929206472 591
204 iso_pu_bacteria 8055909800 8055911521 591
205 3300003187 JGI25151J46595_10000547 JGI25151J46595_1000054717 593
206 3300025294 Ga0209025_1000084 Ga0209025_1000084136 593
207 3300025297 Ga0209758_1004209 Ga0209758_10042093 593

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

291

356

0.98

PF00005

ABC_tran

ABC transporter

430

583

0.93

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

634

701

0.93

PF00005

ABC_tran

ABC transporter

83

240

0.92

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

98

276

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tuj-assembly1.cif.gz_C inward facing conformations of the metni methionine abc transporter: dm crystal form 0.955 288 540
4fwi-assembly1.cif.gz_B crystal structure of the nucleotide-binding domain of a dipeptide abc transporter 0.9463 6 256
7cha-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with amppnp 0.9377 6 256
7ch8-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9365 6 256
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.9334 6 260
ID Description Score Start End Superfamily
af_P33916_3_268_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9836 6 258 3.40.50.300
af_P75796_311_605_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9814 286 579 3.40.50.300
af_Q2FZR5_3_331_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9812 6 264 3.40.50.300
af_Q2G1F8_1_274_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9812 6 265 3.40.50.300
af_P33916_272_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9812 286 538 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3N5SIR2-F1-model_v4 ABC transporter ATP-binding protein 0.9899 6 265 GO:0005524
GO:0015833
GO:0016887
AF-A0A2V0QQM6-F1-model_v4 ABC-type dipeptide transporter (EC 7.4.2.9) 0.9863 89 261 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-A0A0M3UBW7-F1-model_v4 ABC transporter domain-containing protein 0.9859 419 542 GO:0005524
GO:0016887
AF-A0A7W1WKK1-F1-model_v4 ABC transporter ATP-binding protein 0.9847 4 264 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-A0A382DX45-F1-model_v4 ABC transporter domain-containing protein 0.9844 97 261 GO:0005524
GO:0015833
GO:0016887

Feature Viewer

pLDDT pTM Quality
87.42 0.86 High
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Predicted Structure (AlphaFold2)

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