F315856

General Info

Members Datasets Scaffolds Average Seq Length
206 145 121 647

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8055592153|8055592331
Length 731
Sequence CCSTDDSLNLVNKKEHKHKYDTQGNQLCCLKTEKIYKNAGASDLLKDANHSDDGHGHTGGKSCSKADTKHCDDDHNHIEKSGRNHDHHGHNHDHHGHSHGDDHDHSHDIEGKTTFQLFMPAGISLALLLVAIGFDNYFPQTWFTGWVRIAWYVIAYLPVGLPVIKEAVESIRYKDFFSEFFLMAIATIGAFALGEYPEAVAVMLFYSVGEVFQTIAVSRAKGNIKALLDQRPDEVTVIRAGKPIVVKAEDAYIGDVIQLKPGEKLGLDGELISETASFNTAALTGESKPDTKSKGETVLAGMINLNTVSQIKVTTDYSDSKLSRILELVQDATSQKAPTELFIRKFSKIYTPIVVYLSIAITLLPALFVDNYVFSEWLYRALVFLVISCPCALVISIPLGYFGGIGAASRNGILLKGSNFLDILAKVENVVMDKTGTLTEGVFKVQEVFIKPEFNKDEILNLVNVLESQSTHPVATAIHNYWGEVDADVNLANVEEIAGHGLKATVNGKELLVGNFKLLDKFNISHDADTANIVYTVIAVAYDRKFVGYLTISDSIKVDAKAAIEKLRKMGVKTTMLSGDKNTVVQFVSGQLGIDSAYGDLLPEDKVNRVKEIKSRNGSVAFVGDGVNDAPVIALSDAGIAMGGLGSDAAIETADVVIQDDMPSKIPMAINIGKQTKKIVFQNIALAFGVKAIVLILGAGGLATMWEAVFADVGVALLAILNAVRIQKMKF

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
3 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
4 2523533629 Kaistella palustris DSM 21579 Isolate Rhizosphere
5 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
6 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
7 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
8 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
9 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
10 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
11 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
12 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
13 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
14 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
15 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
16 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
17 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
18 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
19 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
20 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
21 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
22 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
23 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
24 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
25 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
26 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
27 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
28 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
29 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
30 2738541284 Pedobacter sp. YR016 Isolate Unclassified
31 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
32 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
33 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
34 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
35 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
36 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
37 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
38 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
39 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
40 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
41 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
42 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
43 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
44 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
45 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
46 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
47 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
48 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
49 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
50 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
51 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
52 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
53 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
54 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
55 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
56 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
57 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
58 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
59 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
60 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
61 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
62 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
63 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
64 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
65 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
66 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
67 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
68 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
69 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
70 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
71 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
72 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
73 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
74 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
75 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
76 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
77 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
78 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
79 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
80 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
81 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
82 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
83 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
84 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
85 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
86 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
87 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
88 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
89 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
90 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
91 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
92 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
93 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
94 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
95 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
96 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
97 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
103 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
104 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
108 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
109 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
110 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
111 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
114 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
115 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
116 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
117 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
118 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
119 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
120 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
121 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
124 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
125 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
126 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
127 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
128 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
129 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
130 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
131 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
135 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
136 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
137 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
138 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
139 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
140 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
141 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
142 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere
143 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
144 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
145 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 58.25
Metatranscriptomes 0
Isolates 41.75

Biome Distribution

Category Percentage (%)
Aerial Root 0.97
Bulb 0
Endosphere 2.91
Nodule 2.43
Rhizoplane 0
Rhizosphere 66.5
Stem 0
Stem Tuber 0
Unclassified 27.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2468385 2162886007 Bacteria 3064
2 JGI24741J21665_1000440 3300001915 Bacteria 12557
3 rootH1_10005563 3300003316 Bacteria 8986
4 rootH1_10005563 3300003323 Bacteria 92714
5 rootH1_10088667 3300003323 Bacteria 4496
6 rootH1_10196373 3300003323 Bacteria 5632
7 Ga0065714_10003093 3300005288 Bacteria 27826
8 Ga0065714_10003233 3300005288 Bacteria 7920
9 Ga0065704_10070241 3300005289 Bacteria 50607
10 Ga0065704_10070573 3300005289 Bacteria 20102
11 Ga0065704_10071008 3300005289 Bacteria 13796
12 Ga0065704_10072331 3300005289 Bacteria 8727
13 Ga0065704_10073593 3300005289 Bacteria 6980
14 Ga0065704_10089600 3300005289 Bacteria 2846
15 Ga0065704_10101635 3300005289 Bacteria 2230
16 Ga0070683_100011209 3300005329 Bacteria 7736
17 Ga0070682_100000292 3300005337 Bacteria 35560
18 Ga0099824_1005769 3300006942 Bacteria 17315
19 Ga0079104_1000317 3300006946 Bacteria 60886
20 Ga0099826_10000789 3300006948 Bacteria 16851
21 Ga0105244_10000004 3300009036 Bacteria 492478
22 Ga0105244_10000005 3300009036 Bacteria 481412
23 Ga0105243_10000007 3300009148 Bacteria 445042
24 Ga0105243_10000016 3300009148 Bacteria 235629
25 Ga0105243_10000216 3300009148 Bacteria 67300
26 Ga0157373_10000002 3300013100 Bacteria 750094
27 Ga0157373_10000032 3300013100 Bacteria 126310
28 Ga0157373_10001284 3300013100 Bacteria 19188
29 Ga0157371_10000803 3300013102 Bacteria 36021
30 Ga0157370_10000136 3300013104 Bacteria 88390
31 Ga0157370_10000464 3300013104 Bacteria 50658
32 Ga0157370_10009188 3300013104 Bacteria 10598
33 Ga0157370_10022527 3300013104 Bacteria 6268
34 Ga0157369_10163684 3300013105 Bacteria 2347
35 Ga0157375_10000227 3300013308 Bacteria 52292
36 Ga0182008_10000003 3300014497 Bacteria 456880
37 Ga0182008_10000006 3300014497 Bacteria 378521
38 Ga0182006_1000001 3300015261 Bacteria 1091090
39 Ga0182006_1001123 3300015261 Bacteria 17028
40 Ga0182007_10010990 3300015262 Bacteria 3546
41 Ga0163161_10000007 3300017792 Bacteria 301614
42 Ga0163161_10068063 3300017792 Bacteria 2601
43 Ga0209675_1000115 3300025291 Bacteria 111981
44 Ga0207655_1000008 3300025728 Bacteria 734289
45 Ga0207655_1000016 3300025728 Bacteria 551476
46 Ga0207709_10000020 3300025935 Bacteria 392366
47 Ga0207709_10000033 3300025935 Bacteria 320483
48 Ga0207709_10000084 3300025935 Bacteria 161002
49 Ga0207661_10001609 3300025944 Bacteria 15367
50 Ga0209281_1000116 3300027111 Bacteria 209707
51 Ga0307408_100000132 3300031548 Bacteria 82821
52 Ga0307408_100032087 3300031548 Bacteria 3662
53 Ga0307405_10000001 3300031731 Bacteria 1731270
54 Ga0307410_10001392 3300031852 Bacteria 10879
55 Ga0307406_10000153 3300031901 Bacteria 41029
56 Ga0307406_10000506 3300031901 Bacteria 22379
57 Ga0307406_10004130 3300031901 Bacteria 7905
58 Ga0307412_10000055 3300031911 Bacteria 147100
59 Ga0307412_10000088 3300031911 Bacteria 82058
60 Ga0307412_10000386 3300031911 Bacteria 27395
61 Ga0307412_10003641 3300031911 Bacteria 8560
62 Ga0307416_100000006 3300032002 Bacteria 466074
63 Ga0307416_100134700 3300032002 Bacteria 2232
64 Ga0307414_10000001 3300032004 Bacteria 1352954
65 Ga0307414_10000002 3300032004 Bacteria 623006
66 Ga0307414_10000030 3300032004 Bacteria 187373
67 Ga0307414_10000730 3300032004 Bacteria 16818
68 Ga0307414_10021901 3300032004 Bacteria 4022
69 Ga0439466_0008843 3300041411 Bacteria 3789
70 Ga0439465_0000011 3300041413 Bacteria 38871
71 Ga0439445_0000794 3300042004 Bacteria 6638
72 Ga0495627_000022 3300046453 Bacteria 254672
73 Ga0495638_0052349 3300046460 Bacteria 2543
74 Ga0495596_0002451 3300046500 Bacteria 9983
75 Ga0495606_0031140 3300046507 Bacteria 3714
76 Ga0495610_0000005 3300046512 Bacteria 924111
77 Ga0495632_0001122 3300046519 Bacteria 22926
78 Ga0495663_0000458 3300046525 Bacteria 14927
79 Ga0495654_0000003 3300046530 Bacteria 863485
80 Ga0495609_0000003 3300046538 Bacteria 711547
81 Ga0495609_0000065 3300046538 Bacteria 132230
82 Ga0495633_0000001 3300046558 Bacteria 801972
83 Ga0495633_0000285 3300046558 Bacteria 58070
84 Ga0495625_0000096 3300046660 Bacteria 142609
85 Ga0495686_0000069 3300047472 Bacteria 217778
86 Ga0495686_0000251 3300047472 Bacteria 96361
87 Ga0496116_0000029 3300048919 Bacteria 422187
88 Ga0496116_0000047 3300048919 Bacteria 315121
89 Ga0496116_0006067 3300048919 Bacteria 11055
90 Ga0496116_0009417 3300048919 Bacteria 8326
91 Ga0496117_0000007 3300048920 Bacteria 720505
92 Ga0496117_0000750 3300048920 Bacteria 51106
93 Ga0496117_0005409 3300048920 Bacteria 13432
94 Ga0496118_0000252 3300048921 Bacteria 94470
95 Ga0496119_0000007 3300048922 Bacteria 475920
96 Ga0496121_0046987 3300048924 Bacteria 3688
97 Ga0496122_0000222 3300048925 Bacteria 126693
98 Ga0496122_0000393 3300048925 Bacteria 92954
99 Ga0496122_0000964 3300048925 Bacteria 51617
100 Ga0496122_0002109 3300048925 Bacteria 29449
101 Ga0496122_0011381 3300048925 Bacteria 9018
102 Ga0496123_0021874 3300048926 Bacteria 4954
103 Ga0496123_0023487 3300048926 Bacteria 4718
104 Ga0496123_0049036 3300048926 Bacteria 2835
105 Ga0496124_0000798 3300048927 Bacteria 51242
106 Ga0496124_0123794 3300048927 Bacteria 2063
107 Ga0496125_0037035 3300048928 Bacteria 4247
108 Ga0496125_0046955 3300048928 Bacteria 3617
109 Ga0496126_0002388 3300048929 Bacteria 25537
110 Ga0496126_0002842 3300048929 Bacteria 22649
111 Ga0496126_0110164 3300048929 Bacteria 2399
112 Ga0501040_0018919 3300049576 Bacteria 4577
113 Ga0501238_000039 3300049671 Bacteria 22400
114 Ga0501241_000002 3300049758 Bacteria 194532
115 Ga0501280_000046 3300049776 Bacteria 36972
116 Ga0501280_000250 3300049776 Bacteria 13526
117 Ga0500651_0000448 3300053093 Bacteria 22006
118 Ga0500641_0000020 3300053096 Bacteria 119591
119 Ga0500618_002841 3300053125 Bacteria 6237
120 Ga0500658_0000003 3300053134 Bacteria 512506
121 Ga0500622_0004050 3300053156 Bacteria 9424

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048927 Ga0496124_0123794 Ga0496124_0123794_284_2041 585
2 3300048925 Ga0496122_0000222 Ga0496122_0000222_30015_31991 592
3 3300048926 Ga0496123_0021874 Ga0496123_0021874_2619_4595 592
4 3300048919 Ga0496116_0006067 Ga0496116_0006067_6061_7881 594
5 3300048925 Ga0496122_0011381 Ga0496122_0011381_76_1896 594
6 3300048920 Ga0496117_0000750 Ga0496117_0000750_20780_22696 605
7 3300048926 Ga0496123_0023487 Ga0496123_0023487_2459_4375 605
8 3300049776 Ga0501280_000046 Ga0501280_000046_17031_19061 607
9 3300003323 rootH1_10088667 rootH1_100886672 608
10 3300013105 Ga0157369_10163684 Ga0157369_101636841 608
11 3300015261 Ga0182006_1000001 Ga0182006_1000001790 610
12 3300031911 Ga0307412_10000088 Ga0307412_1000008812 610
13 3300032002 Ga0307416_100000006 Ga0307416_100000006154 610
14 3300015262 Ga0182007_10010990 Ga0182007_100109902 611
15 3300046512 Ga0495610_0000005 Ga0495610_0000005_259945_261909 611
16 3300048925 Ga0496122_0002109 Ga0496122_0002109_23452_25416 611
17 3300005289 Ga0065704_10071008 Ga0065704_1007100813 612
18 3300048919 Ga0496116_0009417 Ga0496116_0009417_231_2264 614
19 3300048920 Ga0496117_0005409 Ga0496117_0005409_2553_4586 614
20 3300001915 JGI24741J21665_1000440 JGI24741J21665_10004405 616
21 3300009148 Ga0105243_10000216 Ga0105243_1000021615 616
22 3300025935 Ga0207709_10000084 Ga0207709_1000008435 616
23 3300005289 Ga0065704_10101635 Ga0065704_101016352 617
24 3300009148 Ga0105243_10000016 Ga0105243_1000001630 617
25 3300025935 Ga0207709_10000020 Ga0207709_10000020165 617
26 3300048929 Ga0496126_0002388 Ga0496126_0002388_23318_25282 617
27 3300046507 Ga0495606_0031140 Ga0495606_0031140_1696_3609 618
28 3300005289 Ga0065704_10072331 Ga0065704_100723313 621
29 3300031731 Ga0307405_10000001 Ga0307405_10000001817 621
30 3300031901 Ga0307406_10004130 Ga0307406_100041303 621
31 3300053096 Ga0500641_0000020 Ga0500641_0000020_28006_29994 621
32 iso_pu_bacteria 2721755487 2722725720 622
33 iso_pu_bacteria 2904780799 2904782482 622
34 iso_pu_bacteria 2919177583 2919178352 622
35 iso_pu_bacteria 2958512119 2958513578 623
36 3300005289 Ga0065704_10073593 Ga0065704_100735933 626
37 3300013100 Ga0157373_10000002 Ga0157373_10000002132 626
38 3300013102 Ga0157371_10000803 Ga0157371_100008035 626
39 3300013104 Ga0157370_10000136 Ga0157370_1000013615 626
40 3300013104 Ga0157370_10009188 Ga0157370_100091886 626
41 3300031852 Ga0307410_10001392 Ga0307410_100013924 626
42 3300032004 Ga0307414_10000002 Ga0307414_1000000260 626
43 3300048919 Ga0496116_0000047 Ga0496116_0000047_164993_166984 626
44 3300048929 Ga0496126_0002842 Ga0496126_0002842_16136_18118 626
45 3300049776 Ga0501280_000250 Ga0501280_000250_9859_11883 626
46 3300009036 Ga0105244_10000004 Ga0105244_10000004286 627
47 3300025728 Ga0207655_1000008 Ga0207655_1000008302 627
48 3300049576 Ga0501040_0018919 Ga0501040_0018919_2300_4285 627
49 3300013100 Ga0157373_10000032 Ga0157373_1000003281 628
50 3300014497 Ga0182008_10000003 Ga0182008_10000003115 628
51 3300046519 Ga0495632_0001122 Ga0495632_0001122_1297_3249 628
52 3300046525 Ga0495663_0000458 Ga0495663_0000458_7226_9172 628
53 3300046558 Ga0495633_0000285 Ga0495633_0000285_20787_22739 628
54 3300046660 Ga0495625_0000096 Ga0495625_0000096_20300_22252 628
55 3300005329 Ga0070683_100011209 Ga0070683_1000112098 629
56 3300025944 Ga0207661_10001609 Ga0207661_1000160916 629
57 3300031548 Ga0307408_100000132 Ga0307408_10000013218 629
58 3300031901 Ga0307406_10000506 Ga0307406_100005065 629
59 3300041413 Ga0439465_0000011 Ga0439465_0000011_13610_15562 629
60 3300053125 Ga0500618_002841 Ga0500618_002841_1232_3361 629
61 3300005288 Ga0065714_10003233 Ga0065714_100032335 630
62 3300013104 Ga0157370_10000464 Ga0157370_100004643 630
63 3300013308 Ga0157375_10000227 Ga0157375_1000022722 630
64 3300031911 Ga0307412_10003641 Ga0307412_100036414 630
65 3300042004 Ga0439445_0000794 Ga0439445_0000794_3464_5416 630
66 3300046453 Ga0495627_000022 Ga0495627_000022_145730_147685 630
67 3300046460 Ga0495638_0052349 Ga0495638_0052349_64_2016 630
68 3300046530 Ga0495654_0000003 Ga0495654_0000003_636530_638485 630
69 3300046558 Ga0495633_0000001 Ga0495633_0000001_747622_749574 630
70 3300047472 Ga0495686_0000069 Ga0495686_0000069_56507_58459 630
71 3300048928 Ga0496125_0037035 Ga0496125_0037035_1711_3663 630
72 3300053156 Ga0500622_0004050 Ga0500622_0004050_1447_3405 630
73 iso_pu_bacteria 2643221600 2644011371 630
74 iso_pu_bacteria 2643221667 2644369779 630
75 iso_pu_bacteria 2643221725 2644685170 630
76 iso_pu_bacteria 2802428842 2802654084 630
77 iso_pu_bacteria 2881359912 2881360535 630
78 iso_pu_bacteria 2903895155 2903896237 630
79 iso_pu_bacteria 2929150217 2929153124 630
80 iso_pu_bacteria 2958458903 2958460820 630
81 iso_pu_bacteria 2977268062 2977269802 630
82 iso_pu_bacteria 2984572630 2984574392 630
83 iso_pu_bacteria 2984606641 2984607841 630
84 iso_pu_bacteria 8054307821 8054309645 630
85 iso_pu_bacteria 8055592153 8055593964 630
86 3300017792 Ga0163161_10068063 Ga0163161_100680632 631
87 3300041411 Ga0439466_0008843 Ga0439466_0008843_50_2080 631
88 3300046538 Ga0495609_0000003 Ga0495609_0000003_633065_635008 631
89 iso_pu_bacteria 2643221716 2644642376 631
90 iso_pu_bacteria 2738541279 2738732036 631
91 iso_pu_bacteria 2738541285 2738764601 631
92 iso_pu_bacteria 2738543007 2739213616 631
93 iso_pu_bacteria 2857618242 2857618525 631
94 iso_pu_bacteria 2890804823 2890807234 631
95 iso_pu_bacteria 2965320100 2965321434 631
96 3300006946 Ga0079104_1000317 Ga0079104_100031723 632
97 3300027111 Ga0209281_1000116 Ga0209281_1000116167 632
98 3300032002 Ga0307416_100134700 Ga0307416_1001347001 632
99 3300048919 Ga0496116_0000029 Ga0496116_0000029_152208_154190 632
100 3300048925 Ga0496122_0000393 Ga0496122_0000393_58550_60535 632
101 3300048927 Ga0496124_0000798 Ga0496124_0000798_30992_32974 632
102 iso_pu_bacteria 2511231000 2511231178 632
103 iso_pu_bacteria 2582581281 2585156640 632
104 iso_pu_bacteria 2582581282 2585160709 632
105 iso_pu_bacteria 2582581873 2585427059 632
106 iso_pu_bacteria 2585428061 2587753800 632
107 iso_pu_bacteria 2585428095 2587865034 632
108 iso_pu_bacteria 2585428115 2587945248 632
109 iso_pu_bacteria 2585428187 2588234546 632
110 iso_pu_bacteria 2775506739 2775674394 632
111 iso_pu_bacteria 2919097161 2919098009 632
112 iso_pu_bacteria 2919399522 2919403270 632
113 iso_pu_bacteria 2945924605 2945924853 632
114 iso_pu_bacteria 2977243572 2977243611 632
115 iso_pu_bacteria 2993372514 2993375162 632
116 iso_pu_bacteria 2993480792 2993482021 632
117 iso_pu_bacteria 3003233435 3003236328 632
118 3300005337 Ga0070682_100000292 Ga0070682_1000002924 633
119 3300009036 Ga0105244_10000005 Ga0105244_10000005366 633
120 3300017792 Ga0163161_10000007 Ga0163161_10000007259 633
121 3300025291 Ga0209675_1000115 Ga0209675_100011525 633
122 3300025728 Ga0207655_1000016 Ga0207655_1000016365 633
123 3300031911 Ga0307412_10000386 Ga0307412_1000038610 633
124 3300032004 Ga0307414_10000001 Ga0307414_10000001601 633
125 3300032004 Ga0307414_10000030 Ga0307414_1000003077 633
126 3300046500 Ga0495596_0002451 Ga0495596_0002451_103_2085 633
127 3300048920 Ga0496117_0000007 Ga0496117_0000007_151107_153089 633
128 3300048921 Ga0496118_0000252 Ga0496118_0000252_16146_18128 633
129 3300048922 Ga0496119_0000007 Ga0496119_0000007_151174_153156 633
130 3300048925 Ga0496122_0000964 Ga0496122_0000964_6525_8507 633
131 3300048926 Ga0496123_0049036 Ga0496123_0049036_593_2575 633
132 3300048928 Ga0496125_0046955 Ga0496125_0046955_1063_3045 633
133 3300048929 Ga0496126_0110164 Ga0496126_0110164_348_2330 633
134 3300049758 Ga0501241_000002 Ga0501241_000002_23605_25557 633
135 3300053134 Ga0500658_0000003 Ga0500658_0000003_335209_337233 633
136 iso_pu_bacteria 2582581278 2585140950 633
137 iso_pu_bacteria 2585428045 2587677156 633
138 iso_pu_bacteria 2585428060 2587746299 633
139 iso_pu_bacteria 2585428182 2588211420 633
140 iso_pu_bacteria 2585428183 2588215797 633
141 iso_pu_bacteria 2585428184 2588219213 633
142 iso_pu_bacteria 2585428185 2588224698 633
143 iso_pu_bacteria 2588253712 2588447494 633
144 iso_pu_bacteria 2588254255 2590603117 633
145 iso_pu_bacteria 2588254257 2590610130 633
146 iso_pu_bacteria 2728369107 2729200830 633
147 iso_pu_bacteria 2738541273 2738700867 633
148 iso_pu_bacteria 2738543014 2739254616 633
149 iso_pu_bacteria 2739367874 2740060350 633
150 iso_pu_bacteria 2751185877 2753674130 633
151 iso_pu_bacteria 2765235839 2765575602 633
152 iso_pu_bacteria 2772190705 2772604503 633
153 iso_pu_bacteria 2816332188 2816875453 633
154 iso_pu_bacteria 2842083920 2842086186 633
155 iso_pu_bacteria 2871720351 2871723527 633
156 iso_pu_bacteria 2881955468 2881957209 633
157 iso_pu_bacteria 2889290771 2889293890 633
158 iso_pu_bacteria 2896317667 2896321505 633
159 iso_pu_bacteria 2905999023 2905999053 633
160 iso_pu_bacteria 2919683626 2919688292 633
161 iso_pu_bacteria 2946019816 2946024014 633
162 3300006942 Ga0099824_1005769 Ga0099824_100576910 634
163 3300006948 Ga0099826_10000789 Ga0099826_100007898 634
164 3300048924 Ga0496121_0046987 Ga0496121_0046987_826_2826 634
165 iso_pu_bacteria 2816332280 2817415882 634
166 3300005289 Ga0065704_10070573 Ga0065704_1007057315 635
167 3300005289 Ga0065704_10089600 Ga0065704_100896002 635
168 3300009148 Ga0105243_10000007 Ga0105243_10000007149 635
169 3300025935 Ga0207709_10000033 Ga0207709_10000033249 635
170 3300047472 Ga0495686_0000251 Ga0495686_0000251_68065_70101 635
171 iso_pu_bacteria 2857613821 2857617419 635
172 iso_pu_bacteria 2896344016 2896345368 635
173 3300031548 Ga0307408_100032087 Ga0307408_1000320873 636
174 3300031901 Ga0307406_10000153 Ga0307406_100001534 636
175 3300049671 Ga0501238_000039 Ga0501238_000039_10823_12847 636
176 iso_pu_bacteria 2519899754 2520879232 636
177 iso_pu_bacteria 2904419702 2904420674 636
178 iso_pu_bacteria 2945924605 2945926480 636
179 iso_pu_bacteria 2993372514 2993372640 636
180 iso_pu_bacteria 8055592153 8055593592 636
181 iso_pu_bacteria 8056440228 8056441550 636
182 iso_pu_bacteria 2721755487 2722728392 637
183 iso_pu_bacteria 8056440228 8056441003 637
184 3300013104 Ga0157370_10022527 Ga0157370_100225276 638
185 iso_pu_bacteria 2739367866 2740034630 638
186 iso_pu_bacteria 2898713307 2898715348 638
187 iso_pu_bacteria 2993372514 2993372730 638
188 iso_pu_bacteria 3003233435 3003235235 638
189 3300053093 Ga0500651_0000448 Ga0500651_0000448_4945_6936 639
190 3300046538 Ga0495609_0000065 Ga0495609_0000065_88499_90550 640
191 3300003323 rootH1_10005563 rootH1_1000556323 641
192 iso_pu_bacteria 2523533629 2524006029 641
193 iso_pu_bacteria 2738541284 2738760300 641
194 iso_pu_bacteria 2775506987 2776612347 641
195 3300014497 Ga0182008_10000006 Ga0182008_10000006216 642
196 iso_pu_bacteria 8036736890 8036738464 642
197 iso_pu_bacteria 8055592153 8055592331 642
198 3300032004 Ga0307414_10000730 Ga0307414_100007303 643
199 2162886007 SwRhRL2b_contig_2468385 SwRhRL2b_0883.00002960 645
200 3300003323 rootH1_10196373 rootH1_101963732 645
201 3300005288 Ga0065714_10003093 Ga0065714_1000309313 645
202 3300005289 Ga0065704_10070241 Ga0065704_1007024120 645
203 3300013100 Ga0157373_10001284 Ga0157373_100012842 645
204 3300015261 Ga0182006_1001123 Ga0182006_10011236 645
205 3300031911 Ga0307412_10000055 Ga0307412_1000005586 645
206 3300032004 Ga0307414_10021901 Ga0307414_100219012 645

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00122

E1-E2_ATPase

E1-E2 ATPase

229

411

0.94

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

427

637

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2voy-assembly1.cif.gz_I cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.9482 471 584
3sky-assembly1.cif.gz_A 2.1a crystal structure of the phosphate bound atp binding domain of archaeoglobus fulgidus copb 0.9127 334 588
3sky-assembly1.cif.gz_A 2.1a crystal structure of the phosphate bound atp binding domain of archaeoglobus fulgidus copb 0.8894 334 588
4bbj-assembly1.cif.gz_A copper-transporting pib-atpase in complex with beryllium fluoride representing the e2p state 0.8861 33 645
5lbd-assembly1.cif.gz_A crystal structure of the n-domain of hma6, a copper-transporting p-type atpase 0.876 357 467
ID Description Score Start End Superfamily
af_Q557B5_1074_1224_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9592 465 597 3.40.50.1000
4bbjA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9589 471 576 3.40.50.1000
4umvA02 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9482 145 246 2.70.150.10
4umvA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9406 471 576 3.40.50.1000
af_O16331_633_787_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9381 471 576 3.40.50.1000
ID Description Score Start End GO Terms
AF-A0A069PSM4-F1-model_v4 Uncharacterized protein 0.952 490 640 GO:0005524
GO:0012505
GO:0015086
GO:0016020
GO:0016887
AF-A0A1F8WY12-F1-model_v4 Uncharacterized protein 0.9341 490 640 GO:0005524
GO:0012505
GO:0016020
GO:0016887
AF-X1HWA4-F1-model_v4 Heavy metal translocating P-type ATPase 0.932 488 644 GO:0005524
GO:0016020
GO:0016887
AF-A0A432JR33-F1-model_v4 deleted 0.9293 158 239
AF-A0A3D1LC62-F1-model_v4 Heavy metal translocating P-type ATPase 0.9285 147 227 GO:0005507
GO:0016020
GO:0043682
GO:0055070

Feature Viewer

pLDDT pTM Quality
77.21 0.64 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map